python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- ArgR_arg_rep1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes ArgR_arg_rep1.SE.a.5p.counts.plus.wig -notitle -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- ArgR_arg_rep1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes ArgR_arg_rep1.SE.a.5p.counts.minus.wig -notitle -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- ArgR_arg_rep2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes ArgR_arg_rep2.SE.a.5p.counts.plus.wig -notitle -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- ArgR_arg_rep2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes ArgR_arg_rep2.SE.a.5p.counts.minus.wig -notitle -uniqueBAM -stranded -