python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_1.fastq0 GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_2.fastq0 | python ~/code/demultiplexFASTQDualIndex.py - pool1config 1 -suffix -chunks0
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_1.fastq1 GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_2.fastq1 | python ~/code/demultiplexFASTQDualIndex.py - pool1config 1 -suffix -chunks1
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_1.fastq10 GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_2.fastq10 | python ~/code/demultiplexFASTQDualIndex.py - pool1config 1 -suffix -chunks10
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_1.fastq100 GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_2.fastq100 | python ~/code/demultiplexFASTQDualIndex.py - pool1config 1 -suffix -chunks100
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_1.fastq101 GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_2.fastq101 | python ~/code/demultiplexFASTQDualIndex.py - pool1config 1 -suffix -chunks101
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_1.fastq102 GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_2.fastq102 | python ~/code/demultiplexFASTQDualIndex.py - pool1config 1 -suffix -chunks102
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_1.fastq103 GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_2.fastq103 | python ~/code/demultiplexFASTQDualIndex.py - pool1config 1 -suffix -chunks103
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_1.fastq104 GKM_BD_CKDL230030534-1A_22CWN2LT3_L8_2.fastq104 | python ~/code/demultiplexFASTQDualIndex.py - pool1config 1 -suffix -chunks104
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