## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[KAS_BamGal4.2x36mers.dm6.unique.bam] OUTPUT=KAS_BamGal4.2x36mers.dm6.unique.dedup.bam METRICS_FILE=KAS_BamGal4.2x36mers.dm6.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Dec 28 01:15:44 PST 2022

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	36768	0	0	3875	414	0.105391	178608

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010256
2.0	1.832552
3.0	2.501858
4.0	3.046639
5.0	3.490062
6.0	3.850986
7.0	4.144759
8.0	4.383875
9.0	4.578503
10.0	4.73692
11.0	4.865863
12.0	4.970816
13.0	5.056243
14.0	5.125775
15.0	5.182371
16.0	5.228437
17.0	5.265933
18.0	5.296452
19.0	5.321293
20.0	5.341513
21.0	5.357971
22.0	5.371366
23.0	5.382269
24.0	5.391144
25.0	5.398368
26.0	5.404247
27.0	5.409033
28.0	5.412928
29.0	5.416099
30.0	5.41868
31.0	5.42078
32.0	5.42249
33.0	5.423882
34.0	5.425014
35.0	5.425936
36.0	5.426687
37.0	5.427298
38.0	5.427795
39.0	5.4282
40.0	5.428529
41.0	5.428797
42.0	5.429015
43.0	5.429193
44.0	5.429337
45.0	5.429455
46.0	5.429551
47.0	5.429629
48.0	5.429692
49.0	5.429744
50.0	5.429786
51.0	5.42982
52.0	5.429848
53.0	5.429871
54.0	5.429889
55.0	5.429904
56.0	5.429916
57.0	5.429926
58.0	5.429934
59.0	5.429941
60.0	5.429946
61.0	5.429951
62.0	5.429954
63.0	5.429957
64.0	5.42996
65.0	5.429962
66.0	5.429963
67.0	5.429964
68.0	5.429965
69.0	5.429966
70.0	5.429967
71.0	5.429967
72.0	5.429968
73.0	5.429968
74.0	5.429969
75.0	5.429969
76.0	5.429969
77.0	5.429969
78.0	5.429969
79.0	5.429969
80.0	5.42997
81.0	5.42997
82.0	5.42997
83.0	5.42997
84.0	5.42997
85.0	5.42997
86.0	5.42997
87.0	5.42997
88.0	5.42997
89.0	5.42997
90.0	5.42997
91.0	5.42997
92.0	5.42997
93.0	5.42997
94.0	5.42997
95.0	5.42997
96.0	5.42997
97.0	5.42997
98.0	5.42997
99.0	5.42997
100.0	5.42997

