#experiment experiment link target_type target biosample_name biosample_type biorep_id lab rfa assembly bam bam link unfiltered bam unfiltered bam link hiq_reads loq_reads mappable fract_mappable end r_lengths map_length crop_length picard_read_pairs_examined picard_unpaired_reads_examined usable_frags fract_usable NRF PBC1 PBC2 frag_len NSC RSC xcor plot library library aliases from fastqs platform date_created release status internal status DX analysis ENCSR469WAO https://www.encodeproject.org/experiments/ENCSR469WAO "transcription factor,chromatin remodeller" CBX2-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF103HWK https://www.encodeproject.org/files/ENCFF103HWK/@@download/ENCFF103HWK.bam ENCFF159PFM https://www.encodeproject.org/files/ENCFF159PFM/@@download/ENCFF159PFM.bam 26.0 M 0 25.0 M 0.962 SE 76 76 None 0.0 M 22.3 M 19.4 M 0.745 0.87 0.87 7.54 180 1.02 2.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b5b6cb8-4a6d-4157-8d39-5d25ac381d94/@@download/cross_correlation_plot/ENCFF409XOE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB652ELI bradley-bernstein:DNA_Lib 6981 ENCFF409XOE HiSeq 2500 2016-06-30T17:30:25.608844+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvVx803695bJ20V5ZzVFzj ENCSR469WAO https://www.encodeproject.org/experiments/ENCSR469WAO "transcription factor,chromatin remodeller" CBX2-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF806FPG https://www.encodeproject.org/files/ENCFF806FPG/@@download/ENCFF806FPG.bam ENCFF610CGY https://www.encodeproject.org/files/ENCFF610CGY/@@download/ENCFF610CGY.bam 34.0 M 0 32.9 M 0.969 SE 76 76 None 0.0 M 29.2 M 23.8 M 0.700 0.82 0.81 5.02 210 1.02 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/08368d51-0563-4f98-b047-55fdbd5ade58/@@download/cross_correlation_plot/ENCFF701LMH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB486ZSZ bradley-bernstein:DNA_Lib 7213 ENCFF701LMH HiSeq 2500 2016-06-30T17:31:38.858009+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvVzj03693gbZ2XvPBXJpZ ENCSR616MOB https://www.encodeproject.org/experiments/ENCSR616MOB "transcription factor,chromatin remodeller" CBX8-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF777WTW https://www.encodeproject.org/files/ENCFF777WTW/@@download/ENCFF777WTW.bam ENCFF922GAV https://www.encodeproject.org/files/ENCFF922GAV/@@download/ENCFF922GAV.bam 33.1 M 0 32.3 M 0.975 SE 76 76 None 0.0 M 28.7 M 26.6 M 0.803 0.93 0.93 14.21 190 1.02 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d0b1d0a-0ca0-46bd-a001-b2bfb490fc5f/@@download/cross_correlation_plot/ENCFF482UZA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB826RGQ bradley-bernstein:DNA_Lib 6982 ENCFF482UZA HiSeq 2500 2016-06-30T17:31:36.470324+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvX2Q03694Z7Qq0438566B ENCSR616MOB https://www.encodeproject.org/experiments/ENCSR616MOB "transcription factor,chromatin remodeller" CBX8-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF878AOT https://www.encodeproject.org/files/ENCFF878AOT/@@download/ENCFF878AOT.bam ENCFF268TFG https://www.encodeproject.org/files/ENCFF268TFG/@@download/ENCFF268TFG.bam 106.0 M 0 102.4 M 0.966 SE 76 76 None 0.0 M 89.8 M 82.6 M 0.779 0.92 0.92 12.83 195 1.01 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9ae270c-f292-4f74-990b-35c955ab31a2/@@download/cross_correlation_plot/ENCFF587OYH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB600TUB bradley-bernstein:DNA_Lib 7146 ENCFF587OYH HiSeq 2500 2016-06-30T17:37:41.363968+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvX500369Fqzv9B81X79Z8 ENCSR368ZHR https://www.encodeproject.org/experiments/ENCSR368ZHR "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF305VOQ https://www.encodeproject.org/files/ENCFF305VOQ/@@download/ENCFF305VOQ.bam ENCFF832JHV https://www.encodeproject.org/files/ENCFF832JHV/@@download/ENCFF832JHV.bam 47.5 M 0 46.0 M 0.969 SE 76 76 None 0.0 M 40.8 M 35.6 M 0.750 0.87 0.87 7.62 200 1.02 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/453f8068-6781-4eee-ade0-b9c98159e8a7/@@download/cross_correlation_plot/ENCFF872FEL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB668FPF bradley-bernstein:DNA_Lib 7208 ENCFF872FEL HiSeq 2500 2016-06-30T17:33:00.282244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvX8003698YQ49Xb7p2b82 ENCSR368ZHR https://www.encodeproject.org/experiments/ENCSR368ZHR "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF678DRH https://www.encodeproject.org/files/ENCFF678DRH/@@download/ENCFF678DRH.bam ENCFF603XOO https://www.encodeproject.org/files/ENCFF603XOO/@@download/ENCFF603XOO.bam 22.6 M 0 21.7 M 0.963 SE 76 76 None 0.0 M 19.3 M 17.7 M 0.785 0.92 0.92 12.35 190 1.02 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/6811087b-0df6-47df-9833-f7d820b9283a/@@download/cross_correlation_plot/ENCFF310WZD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB661RGE bradley-bernstein:DNA_Lib 6987 ENCFF310WZD HiSeq 2500 2016-06-30T17:30:28.841069+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvXF0036960jj23bp11B7B ENCSR550SCU https://www.encodeproject.org/experiments/ENCSR550SCU "transcription factor,chromatin remodeller,RNA binding protein" CHD4-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF569SUA https://www.encodeproject.org/files/ENCFF569SUA/@@download/ENCFF569SUA.bam ENCFF664DYM https://www.encodeproject.org/files/ENCFF664DYM/@@download/ENCFF664DYM.bam 40.8 M 0 37.5 M 0.920 SE 76 76 None 0.0 M 33.1 M 31.6 M 0.774 0.95 0.96 22.52 150 1.01 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5194d2e-69ff-4b10-8834-74b7753e4079/@@download/cross_correlation_plot/ENCFF102EIG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB580WQQ bradley-bernstein:DNA_Lib 7415 ENCFF102EIG HiSeq 2500 2016-06-30T17:32:03.409666+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvXJj036960jj23bp11B7f ENCSR550SCU https://www.encodeproject.org/experiments/ENCSR550SCU "transcription factor,chromatin remodeller,RNA binding protein" CHD4-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF226TRN https://www.encodeproject.org/files/ENCFF226TRN/@@download/ENCFF226TRN.bam ENCFF933GIN https://www.encodeproject.org/files/ENCFF933GIN/@@download/ENCFF933GIN.bam 34.7 M 0 33.5 M 0.966 SE 76 76 None 0.0 M 29.6 M 24.3 M 0.700 0.82 0.81 5.15 180 1.04 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/80b7db50-c78e-4bca-8241-32abebf5b3ab/@@download/cross_correlation_plot/ENCFF221INE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB509CNN bradley-bernstein:DNA_Lib 7009 ENCFF221INE HiSeq 2500 2016-06-30T17:31:18.344928+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvXQQ03693Zb4P6xpxxbpP ENCSR817JZD https://www.encodeproject.org/experiments/ENCSR817JZD "transcription factor,chromatin remodeller,RNA binding protein" CHD7-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF528NCI https://www.encodeproject.org/files/ENCFF528NCI/@@download/ENCFF528NCI.bam ENCFF395DEJ https://www.encodeproject.org/files/ENCFF395DEJ/@@download/ENCFF395DEJ.bam 41.7 M 0 40.5 M 0.970 SE 76 76 None 0.0 M 35.9 M 33.1 M 0.794 0.93 0.93 13.73 200 1.01 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/517cf029-d99c-4860-a07e-0cc517757488/@@download/cross_correlation_plot/ENCFF501XWM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB807XEG bradley-bernstein:DNA_Lib 7209 ENCFF501XWM HiSeq 2500 2016-06-30T17:32:32.977055+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvXY803694Z7Qq0438566g ENCSR817JZD https://www.encodeproject.org/experiments/ENCSR817JZD "transcription factor,chromatin remodeller,RNA binding protein" CHD7-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF641SCH https://www.encodeproject.org/files/ENCFF641SCH/@@download/ENCFF641SCH.bam ENCFF159IVZ https://www.encodeproject.org/files/ENCFF159IVZ/@@download/ENCFF159IVZ.bam 34.9 M 0 33.8 M 0.969 SE 76 76 None 0.0 M 30.0 M 28.3 M 0.813 0.94 0.95 18.84 165 1.01 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/2476fd75-2830-4544-afba-5bec9b5b4f04/@@download/cross_correlation_plot/ENCFF213CYO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB459IVE bradley-bernstein:DNA_Lib 6985 ENCFF213CYO HiSeq 2500 2016-06-30T17:31:21.393458+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvXbj0369J31Q0Pkv5xpBP ENCSR000ASR https://www.encodeproject.org/experiments/ENCSR000ASR control Control-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF569SHN https://www.encodeproject.org/files/ENCFF569SHN/@@download/ENCFF569SHN.bam ENCFF284JEI https://www.encodeproject.org/files/ENCFF284JEI/@@download/ENCFF284JEI.bam 38.3 M 0 37.4 M 0.978 SE 36 36 native 0.0 M 28.1 M 27.4 M 0.716 0.98 0.98 50.69 195 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/48e47f70-fbf8-4263-966b-0fe4b6dd22bb/@@download/cross_correlation_plot/ENCFF000AHJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALB ENCFF000AHJ HiSeq 2000 2016-08-12T23:31:13.388821+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg3zjj0369B8Y08P06PZ1ZY ENCSR000ASR https://www.encodeproject.org/experiments/ENCSR000ASR control Control-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF514TMK https://www.encodeproject.org/files/ENCFF514TMK/@@download/ENCFF514TMK.bam ENCFF227MOQ https://www.encodeproject.org/files/ENCFF227MOQ/@@download/ENCFF227MOQ.bam 23.1 M 0 22.1 M 0.956 SE 36 36 native 0.0 M 16.7 M 15.5 M 0.673 0.94 0.94 15.81 190 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/89d00d42-bb0c-424f-ba33-d470fd90d861/@@download/cross_correlation_plot/ENCFF000AHE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALC ENCFF000AHE HiSeq 2000 2016-08-12T23:32:22.698146+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg3zq003692fF5KK18B21PV ENCSR000ASS https://www.encodeproject.org/experiments/ENCSR000ASS control Control-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF114ODP https://www.encodeproject.org/files/ENCFF114ODP/@@download/ENCFF114ODP.bam ENCFF043PUQ https://www.encodeproject.org/files/ENCFF043PUQ/@@download/ENCFF043PUQ.bam 148.6 M 0 143.7 M 0.967 SE 36 36 native 0.0 M 106.9 M 98.9 M 0.665 0.94 0.94 15.43 210 1.01 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/d591d308-9d57-41c4-9656-db2b2e7893eb/@@download/cross_correlation_plot/ENCFF000AHV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADF ENCFF000AHV HiSeq 2000 2016-08-09T16:04:29.757822+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYBZ8036927gfXkG2b308Y ENCSR000ASS https://www.encodeproject.org/experiments/ENCSR000ASS control Control-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF482SGU https://www.encodeproject.org/files/ENCFF482SGU/@@download/ENCFF482SGU.bam ENCFF948UNV https://www.encodeproject.org/files/ENCFF948UNV/@@download/ENCFF948UNV.bam 40.3 M 0 39.0 M 0.968 SE 36 36 native 0.0 M 29.3 M 24.9 M 0.619 0.86 0.86 7.03 190 1.02 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0333f47-4935-4fc7-9388-5b5c7ac37b16/@@download/cross_correlation_plot/ENCFF000AHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADE ENCFF000AHM HiSeq 2000 2016-08-09T15:59:13.427599+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYBfQ03691jjxffj2bKqGy ENCSR787VQB https://www.encodeproject.org/experiments/ENCSR787VQB control Control-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF572IKT https://www.encodeproject.org/files/ENCFF572IKT/@@download/ENCFF572IKT.bam ENCFF347TXP https://www.encodeproject.org/files/ENCFF347TXP/@@download/ENCFF347TXP.bam 86.6 M 0 84.1 M 0.970 SE 76 76 None 0.0 M 74.4 M 72.4 M 0.836 0.98 0.98 52.06 90 1.00 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcaaa634-1912-4fef-a1a7-28d48a801bce/@@download/cross_correlation_plot/ENCFF343EVP-ENCFF214KMN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB973LVG,ENCLB165ISA" "bradley-bernstein:DNA_Lib 7007,bradley-bernstein:DNA_Lib 6983" "ENCFF214KMN,ENCFF343EVP" HiSeq 2500 2016-06-30T17:36:14.143231+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvXk00369J04b0ZkqXbZ3Z ENCSR787VQB https://www.encodeproject.org/experiments/ENCSR787VQB control Control-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF714AMB https://www.encodeproject.org/files/ENCFF714AMB/@@download/ENCFF714AMB.bam ENCFF226SLF https://www.encodeproject.org/files/ENCFF226SLF/@@download/ENCFF226SLF.bam 28.5 M 0 27.5 M 0.964 SE 76 76 None 0.0 M 24.2 M 23.5 M 0.825 0.98 0.98 49.34 195 1.01 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a720a35-cf6f-494c-8a6b-cb58573cf83d/@@download/cross_correlation_plot/ENCFF920WNX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB039UAN bradley-bernstein:DNA_Lib 7316 ENCFF920WNX HiSeq 2500 2016-06-30T17:28:08.952685+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvXv0036960jj23bp11B8K ENCSR000AUE https://www.encodeproject.org/experiments/ENCSR000AUE "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF788OKP https://www.encodeproject.org/files/ENCFF788OKP/@@download/ENCFF788OKP.bam ENCFF600XPF https://www.encodeproject.org/files/ENCFF600XPF/@@download/ENCFF600XPF.bam 39.9 M 0 36.4 M 0.914 SE 36 36 native 0.0 M 28.8 M 16.3 M 0.408 0.59 0.57 2.23 245 1.84 3.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/0803863e-7dd1-442d-a48a-891dc64d4681/@@download/cross_correlation_plot/ENCFF000AHR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKO ENCFF000AHR HiSeq 2000 2017-08-24T16:47:21.488915+00:00 uploading processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F6PKGq0036908FQF9V4F8q5Z ENCSR000AUE https://www.encodeproject.org/experiments/ENCSR000AUE "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF944TNR https://www.encodeproject.org/files/ENCFF944TNR/@@download/ENCFF944TNR.bam ENCFF296OYD https://www.encodeproject.org/files/ENCFF296OYD/@@download/ENCFF296OYD.bam 17.0 M 0 14.8 M 0.870 SE 36 36 native 0.0 M 11.4 M 6.2 M 0.362 0.56 0.54 2.09 240 1.67 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/79a18cd5-c608-4ef8-abe8-a3ec8efe8e69/@@download/cross_correlation_plot/ENCFF000AHP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKP ENCFF000AHP HiSeq 2000 2017-08-24T15:42:41.982481+00:00 uploading processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F6PKGz0036908FQF9V4F8q5y ENCSR000AUF https://www.encodeproject.org/experiments/ENCSR000AUF "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF205XEH https://www.encodeproject.org/files/ENCFF205XEH/@@download/ENCFF205XEH.bam ENCFF942JLW https://www.encodeproject.org/files/ENCFF942JLW/@@download/ENCFF942JLW.bam 49.2 M 0 45.0 M 0.914 SE 36 36 native 0.0 M 35.6 M 28.5 M 0.580 0.83 0.84 6.63 250 1.84 2.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0843a3a-6089-45cb-a29e-8ef92a88231e/@@download/cross_correlation_plot/ENCFF000AHX-ENCFF000AHW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695AJC,ENCLB695AJF" "ENCFF000AHX,ENCFF000AHW" HiSeq 2000 2017-04-21T06:13:35.206300+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3vj7g80369P23gv0v3Bb74J ENCSR321BJQ https://www.encodeproject.org/experiments/ENCSR321BJQ "transcription factor,chromatin remodeller" EHMT2-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF535ZUV https://www.encodeproject.org/files/ENCFF535ZUV/@@download/ENCFF535ZUV.bam ENCFF325MBD https://www.encodeproject.org/files/ENCFF325MBD/@@download/ENCFF325MBD.bam 23.7 M 0 22.9 M 0.968 SE 76 76 None 0.0 M 20.4 M 16.0 M 0.676 0.79 0.78 4.28 185 1.05 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/285f2cbd-f857-4343-85b2-be63db610400/@@download/cross_correlation_plot/ENCFF121HEJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB543CKY bradley-bernstein:DNA_Lib 7005 ENCFF121HEJ HiSeq 2500 2016-06-30T17:26:57.904378+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvXyj03694Z7Qq04385676 ENCSR321BJQ https://www.encodeproject.org/experiments/ENCSR321BJQ "transcription factor,chromatin remodeller" EHMT2-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF967QJQ https://www.encodeproject.org/files/ENCFF967QJQ/@@download/ENCFF967QJQ.bam ENCFF792GBH https://www.encodeproject.org/files/ENCFF792GBH/@@download/ENCFF792GBH.bam 49.0 M 0 47.3 M 0.964 SE 76 76 None 0.0 M 41.8 M 38.4 M 0.784 0.92 0.92 12.58 165 1.01 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/499a5ff0-9b91-4ebc-9d1a-c344e7e6a7fb/@@download/cross_correlation_plot/ENCFF892BYO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB031DEJ bradley-bernstein:DNA_Lib 7324 ENCFF892BYO HiSeq 2500 2016-06-30T17:27:52.842305+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvY180369Fqzv9B81X79b9 ENCSR000AUG https://www.encodeproject.org/experiments/ENCSR000AUG "histone,histone modification,narrow histone mark" H2AFZ-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF099PEP https://www.encodeproject.org/files/ENCFF099PEP/@@download/ENCFF099PEP.bam ENCFF479DHB https://www.encodeproject.org/files/ENCFF479DHB/@@download/ENCFF479DHB.bam 56.0 M 0 54.4 M 0.971 SE 36 36 native 0.0 M 42.7 M 40.6 M 0.724 0.96 0.96 22.99 180 1.13 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae75a4bc-1544-44ac-bb3e-4890a7c1b544/@@download/cross_correlation_plot/ENCFF000AIH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADL ENCFF000AIH HiSeq 2000 2016-11-13T02:19:34.843798+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgpVj03699PK8zfkzkBkq0 ENCSR000AUG https://www.encodeproject.org/experiments/ENCSR000AUG "histone,histone modification,narrow histone mark" H2AFZ-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF186XEX https://www.encodeproject.org/files/ENCFF186XEX/@@download/ENCFF186XEX.bam ENCFF073QHW https://www.encodeproject.org/files/ENCFF073QHW/@@download/ENCFF073QHW.bam 23.7 M 0 20.3 M 0.855 SE 36 36 native 0.0 M 15.1 M 10.3 M 0.434 0.71 0.70 3.28 245 1.12 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/70c8769f-0104-4bd0-9c5a-96dfd55a23db/@@download/cross_correlation_plot/ENCFF000AID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADK ENCFF000AID HiSeq 2000 2016-11-13T00:45:30.224536+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygpf803690GY00B90p7367 ENCSR000AUH https://www.encodeproject.org/experiments/ENCSR000AUH "histone,histone modification,narrow histone mark" H2AFZ-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF781RGM https://www.encodeproject.org/files/ENCFF781RGM/@@download/ENCFF781RGM.bam ENCFF907BDY https://www.encodeproject.org/files/ENCFF907BDY/@@download/ENCFF907BDY.bam 43.7 M 0 42.1 M 0.965 SE 36 36 native 0.0 M 32.5 M 31.3 M 0.717 0.97 0.97 31.38 250 1.08 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/26898418-c182-4c80-9e32-2dbbaa6ae7b7/@@download/cross_correlation_plot/ENCFF000AIK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASQ ENCFF000AIK HiSeq 2000 2016-11-13T00:46:35.475076+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygpqj03691P396yvzqkz6v ENCSR000AUH https://www.encodeproject.org/experiments/ENCSR000AUH "histone,histone modification,narrow histone mark" H2AFZ-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF698LKH https://www.encodeproject.org/files/ENCFF698LKH/@@download/ENCFF698LKH.bam ENCFF884HCR https://www.encodeproject.org/files/ENCFF884HCR/@@download/ENCFF884HCR.bam 18.4 M 0 16.7 M 0.905 SE 36 36 native 0.0 M 12.6 M 10.1 M 0.547 0.81 0.81 5.05 225 1.08 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cb49dca-3038-419b-9732-3a3c63ed565e/@@download/cross_correlation_plot/ENCFF000AIJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASR ENCFF000AIJ HiSeq 2000 2016-11-13T00:45:15.108390+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygq00036980Yx5QZkJjQKb ENCSR000AUI https://www.encodeproject.org/experiments/ENCSR000AUI "histone,histone modification,narrow histone mark" H3K27ac-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF999CRP https://www.encodeproject.org/files/ENCFF999CRP/@@download/ENCFF999CRP.bam ENCFF052BVG https://www.encodeproject.org/files/ENCFF052BVG/@@download/ENCFF052BVG.bam 37.6 M 0 35.6 M 0.947 SE 36 36 native 0.0 M 29.1 M 25.6 M 0.681 0.90 0.90 10.69 240 1.37 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/443db79f-e406-4b80-be52-ca6f87a4fc04/@@download/cross_correlation_plot/ENCFF000AKR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFP ENCFF000AKR HiSeq 2000 2016-08-12T23:33:05.653264+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg400803694FJ1Ppv9Qfxxp ENCSR000AUI https://www.encodeproject.org/experiments/ENCSR000AUI "histone,histone modification,narrow histone mark" H3K27ac-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF238AHH https://www.encodeproject.org/files/ENCFF238AHH/@@download/ENCFF238AHH.bam ENCFF540LUD https://www.encodeproject.org/files/ENCFF540LUD/@@download/ENCFF540LUD.bam 22.1 M 0 21.0 M 0.953 SE 36 36 native 0.0 M 17.5 M 14.6 M 0.662 0.84 0.85 7.05 280 1.56 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e27c6be-dd7e-440f-88ca-cdee755bea53/@@download/cross_correlation_plot/ENCFF000AKS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABS ENCFF000AKS HiSeq 2000 2016-08-12T23:33:03.277915+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg40280369242gXJ97j59Jz ENCSR000AVF https://www.encodeproject.org/experiments/ENCSR000AVF "histone,histone modification,narrow histone mark" H3K27ac-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF241YWT https://www.encodeproject.org/files/ENCFF241YWT/@@download/ENCFF241YWT.bam ENCFF762GJM https://www.encodeproject.org/files/ENCFF762GJM/@@download/ENCFF762GJM.bam 49.1 M 0 43.8 M 0.893 SE 36 36 native 0.0 M 36.8 M 26.1 M 0.532 0.74 0.75 4.22 245 1.66 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/98a29d17-3f00-457d-9f07-9cd5eaac6050/@@download/cross_correlation_plot/ENCFF000AKL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABV ENCFF000AKL HiSeq 2000 2016-08-09T15:59:40.047897+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYBKQ036999gGf10330gBX ENCSR000AVF https://www.encodeproject.org/experiments/ENCSR000AVF "histone,histone modification,narrow histone mark" H3K27ac-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF758SXC https://www.encodeproject.org/files/ENCFF758SXC/@@download/ENCFF758SXC.bam ENCFF513DHV https://www.encodeproject.org/files/ENCFF513DHV/@@download/ENCFF513DHV.bam 29.3 M 0 27.1 M 0.925 SE 36 36 native 0.0 M 22.1 M 18.3 M 0.623 0.84 0.85 6.75 230 1.42 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab8a1ac4-2d3d-4952-b0a3-39e09d95baa7/@@download/cross_correlation_plot/ENCFF000AKJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABW ENCFF000AKJ HiSeq 2000 2016-08-09T15:58:59.042599+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYBV803695yYyVq02XB5Bq ENCSR734UYL https://www.encodeproject.org/experiments/ENCSR734UYL "histone,histone modification,narrow histone mark" H3K27ac-human A549 immortalized cell line bradley-bernstein ENCODE2 no fastqs requires lab review ENCSR000AUJ https://www.encodeproject.org/experiments/ENCSR000AUJ "histone,histone modification,broad histone mark" H3K27me3-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF301VZW https://www.encodeproject.org/files/ENCFF301VZW/@@download/ENCFF301VZW.bam ENCFF539LZN https://www.encodeproject.org/files/ENCFF539LZN/@@download/ENCFF539LZN.bam 34.4 M 0 32.4 M 0.940 SE 36 36 native 0.0 M 25.4 M 23.8 M 0.693 0.94 0.94 17.47 210 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/7572358f-db9a-47bb-9f52-4a35c151d830/@@download/cross_correlation_plot/ENCFF000AKW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUM ENCFF000AKW HiSeq 2000 2016-11-13T00:46:06.615064+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygq580369FfP54JvFgqjqB ENCSR000AUJ https://www.encodeproject.org/experiments/ENCSR000AUJ "histone,histone modification,broad histone mark" H3K27me3-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF254IVN https://www.encodeproject.org/files/ENCFF254IVN/@@download/ENCFF254IVN.bam ENCFF028JTM https://www.encodeproject.org/files/ENCFF028JTM/@@download/ENCFF028JTM.bam 33.8 M 0 31.6 M 0.934 SE 36 36 native 0.0 M 24.9 M 20.2 M 0.597 0.82 0.82 5.37 210 1.02 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f26a6df-5dcf-43c4-87c8-ee50b475f675/@@download/cross_correlation_plot/ENCFF000AKV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJR ENCFF000AKV HiSeq 2000 2016-11-13T00:45:59.812705+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygq9803696kgbQ0ZfGKjKg ENCSR000AUK https://www.encodeproject.org/experiments/ENCSR000AUK "histone,histone modification,broad histone mark" H3K27me3-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF747ZKE https://www.encodeproject.org/files/ENCFF747ZKE/@@download/ENCFF747ZKE.bam 155.9 M 0 148.2 M 0.951 SE 36 36 native 0.0 M 114.1 M 86.5 M 0.555 0.78 0.77 4.26 235 1.02 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/d576f59f-14b8-4357-b979-e6336c45becb/@@download/cross_correlation_plot/ENCFF000ALK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APA ENCFF000ALK HiSeq 2000 2017-02-11T03:13:05.449641+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgqPQ03691P396yvzqkz7B ENCSR000AUK https://www.encodeproject.org/experiments/ENCSR000AUK "histone,histone modification,broad histone mark" H3K27me3-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF168ZZS https://www.encodeproject.org/files/ENCFF168ZZS/@@download/ENCFF168ZZS.bam ENCFF692MXS https://www.encodeproject.org/files/ENCFF692MXS/@@download/ENCFF692MXS.bam 36.3 M 0 32.9 M 0.905 SE 36 36 native 0.0 M 25.3 M 14.6 M 0.401 0.61 0.60 2.49 205 1.04 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/3eebf414-8fa4-4a85-ad2b-750026b5f411/@@download/cross_correlation_plot/ENCFF000ALD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APB ENCFF000ALD HiSeq 2000 2016-11-13T00:45:49.418638+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgqbQ036980Yx5QZkJjQPG ENCSR000AUL https://www.encodeproject.org/experiments/ENCSR000AUL "histone,histone modification,broad histone mark" H3K36me3-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF600QRT https://www.encodeproject.org/files/ENCFF600QRT/@@download/ENCFF600QRT.bam ENCFF129EML https://www.encodeproject.org/files/ENCFF129EML/@@download/ENCFF129EML.bam 151.5 M 0 146.1 M 0.964 SE 36 36 native 0.0 M 107.1 M 95.8 M 0.632 0.90 0.90 10.48 235 1.02 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3212c6e-86ff-4abe-b06d-7e4b971473f6/@@download/cross_correlation_plot/ENCFF000ALU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQH ENCFF000ALU HiSeq 2000 2017-02-10T16:28:17.836305+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygqpj036980Yx5QZkJjQPf ENCSR000AUL https://www.encodeproject.org/experiments/ENCSR000AUL "histone,histone modification,broad histone mark" H3K36me3-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF218BOA https://www.encodeproject.org/files/ENCFF218BOA/@@download/ENCFF218BOA.bam ENCFF932DMH https://www.encodeproject.org/files/ENCFF932DMH/@@download/ENCFF932DMH.bam 14.0 M 0 13.6 M 0.972 SE 36 36 native 0.0 M 10.3 M 10.0 M 0.715 0.98 0.98 41.79 -5 1.02 0.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/36cd0bf3-6561-433a-80dc-1d297d6d365f/@@download/cross_correlation_plot/ENCFF000ALQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQG ENCFF000ALQ HiSeq 2000 2016-11-13T00:44:59.114603+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygqzj036980Yx5QZkJjQPy ENCSR000AVG https://www.encodeproject.org/experiments/ENCSR000AVG "histone,histone modification,broad histone mark" H3K36me3-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF982SFR https://www.encodeproject.org/files/ENCFF982SFR/@@download/ENCFF982SFR.bam ENCFF128BFX https://www.encodeproject.org/files/ENCFF128BFX/@@download/ENCFF128BFX.bam 36.1 M 0 33.4 M 0.924 SE 36 36 native 0.0 M 24.2 M 22.4 M 0.621 0.93 0.93 15.02 210 1.03 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/595a7aec-a456-4e37-b127-946338d1fe33/@@download/cross_correlation_plot/ENCFF000ALH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWK ENCFF000ALH HiSeq 2000 2016-11-13T00:45:45.079994+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygx7j0369632125J8YQ28P ENCSR000AVG https://www.encodeproject.org/experiments/ENCSR000AVG "histone,histone modification,broad histone mark" H3K36me3-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF221ZGH https://www.encodeproject.org/files/ENCFF221ZGH/@@download/ENCFF221ZGH.bam ENCFF810BFL https://www.encodeproject.org/files/ENCFF810BFL/@@download/ENCFF810BFL.bam 37.2 M 0 35.5 M 0.955 SE 36 36 native 0.0 M 26.8 M 24.8 M 0.667 0.93 0.93 13.81 190 1.01 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/d78d721a-5f5a-4962-a6ec-f5c91d7e6f0c/@@download/cross_correlation_plot/ENCFF000ALJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWL ENCFF000ALJ HiSeq 2000 2016-11-13T00:45:39.731740+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgxJj03691jKGBVGv8zj1P ENCSR000AUM https://www.encodeproject.org/experiments/ENCSR000AUM "histone,histone modification,broad histone mark" H3K4me1-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF763ADD https://www.encodeproject.org/files/ENCFF763ADD/@@download/ENCFF763ADD.bam 89.8 M 0 85.7 M 0.955 SE 36 36 native 0.0 M 69.2 M 60.3 M 0.671 0.89 0.88 8.66 240 1.07 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/c146d247-f48e-4549-abf8-51de5e28f40b/@@download/cross_correlation_plot/ENCFF000AJC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGY ENCFF000AJC HiSeq 2000 2017-02-11T03:54:16.521217+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygv5803690GY00B90p739y ENCSR000AUM https://www.encodeproject.org/experiments/ENCSR000AUM "histone,histone modification,broad histone mark" H3K4me1-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF243YAC https://www.encodeproject.org/files/ENCFF243YAC/@@download/ENCFF243YAC.bam ENCFF574QCS https://www.encodeproject.org/files/ENCFF574QCS/@@download/ENCFF574QCS.bam 13.9 M 0 13.5 M 0.972 SE 36 36 native 0.0 M 10.9 M 10.6 M 0.765 0.98 0.98 49.76 220 1.04 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/2282603d-8c8e-4470-9ec6-fbe4eb9a969c/@@download/cross_correlation_plot/ENCFF000AIW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGX ENCFF000AIW HiSeq 2000 2016-11-13T00:44:56.271896+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgvF803691P396yvzqkz8V ENCSR000AVH https://www.encodeproject.org/experiments/ENCSR000AVH "histone,histone modification,broad histone mark" H3K4me1-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF939JHP https://www.encodeproject.org/files/ENCFF939JHP/@@download/ENCFF939JHP.bam ENCFF956EAC https://www.encodeproject.org/files/ENCFF956EAC/@@download/ENCFF956EAC.bam 40.4 M 0 39.5 M 0.977 SE 36 36 native 0.0 M 32.7 M 27.8 M 0.688 0.86 0.86 7.04 215 1.10 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/8367ec3d-202e-4df7-b9a1-38441af51c19/@@download/cross_correlation_plot/ENCFF000AIT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOM ENCFF000AIT HiSeq 2000 2016-11-13T00:45:36.479937+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgxfQ03696Z9KfZ8bVfqG6 ENCSR000AVH https://www.encodeproject.org/experiments/ENCSR000AVH "histone,histone modification,broad histone mark" H3K4me1-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF834DVU https://www.encodeproject.org/files/ENCFF834DVU/@@download/ENCFF834DVU.bam ENCFF967HSU https://www.encodeproject.org/files/ENCFF967HSU/@@download/ENCFF967HSU.bam 35.7 M 0 33.0 M 0.926 SE 36 36 native 0.0 M 25.9 M 24.2 M 0.678 0.94 0.94 15.92 215 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/943721f2-69c6-4f23-9a83-017636766947/@@download/cross_correlation_plot/ENCFF000AIS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AON ENCFF000AIS HiSeq 2000 2016-11-13T00:45:48.349996+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygxqj03697qX9798yZFQ6f ENCSR000ATO https://www.encodeproject.org/experiments/ENCSR000ATO "histone,histone modification,narrow histone mark" H3K4me2-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF947TGB https://www.encodeproject.org/files/ENCFF947TGB/@@download/ENCFF947TGB.bam ENCFF693PEJ https://www.encodeproject.org/files/ENCFF693PEJ/@@download/ENCFF693PEJ.bam 29.7 M 0 29.0 M 0.977 SE 36 36 native 0.0 M 24.6 M 22.6 M 0.759 0.93 0.93 14.34 215 1.46 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/a3a0346a-346b-46d8-8318-a39efcc84b52/@@download/cross_correlation_plot/ENCFF000AIZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUD ENCFF000AIZ HiSeq 2000 2016-11-13T00:46:18.975270+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgkyQ0369Fbg36VZ8KyQF6 ENCSR000ATO https://www.encodeproject.org/experiments/ENCSR000ATO "histone,histone modification,narrow histone mark" H3K4me2-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF112IUU https://www.encodeproject.org/files/ENCFF112IUU/@@download/ENCFF112IUU.bam ENCFF121UKG https://www.encodeproject.org/files/ENCFF121UKG/@@download/ENCFF121UKG.bam 10.5 M 0 10.2 M 0.976 SE 36 36 native 0.0 M 8.5 M 8.2 M 0.782 0.97 0.97 31.62 325 1.21 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/0dcc592c-0a18-4ee2-9168-e01361e7b9bc/@@download/cross_correlation_plot/ENCFF000AJB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUE ENCFF000AJB HiSeq 2000 2016-11-13T00:45:49.205734+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygp2j0369632125J8YQ25k ENCSR000AVI https://www.encodeproject.org/experiments/ENCSR000AVI "histone,histone modification,narrow histone mark" H3K4me2-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF183VDS https://www.encodeproject.org/files/ENCFF183VDS/@@download/ENCFF183VDS.bam ENCFF788KTD https://www.encodeproject.org/files/ENCFF788KTD/@@download/ENCFF788KTD.bam 52.7 M 0 50.2 M 0.953 SE 36 36 native 0.0 M 41.0 M 38.0 M 0.722 0.94 0.94 17.36 210 1.31 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/edc588da-4329-4b18-8481-7ee2541f32b6/@@download/cross_correlation_plot/ENCFF000AJI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIJ ENCFF000AJI HiSeq 2000 2016-11-13T00:46:17.232749+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygy3j03691P396yvzqkz9K ENCSR000AVI https://www.encodeproject.org/experiments/ENCSR000AVI "histone,histone modification,narrow histone mark" H3K4me2-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF097AFK https://www.encodeproject.org/files/ENCFF097AFK/@@download/ENCFF097AFK.bam ENCFF521CCD https://www.encodeproject.org/files/ENCFF521CCD/@@download/ENCFF521CCD.bam 32.6 M 0 31.0 M 0.949 SE 36 36 native 0.0 M 24.9 M 22.6 M 0.694 0.92 0.92 12.05 200 1.15 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a76363c-9af7-403d-89d3-9dfeb9f318ca/@@download/cross_correlation_plot/ENCFF000AJH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AII ENCFF000AJH HiSeq 2000 2016-11-13T00:45:27.662602+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygy7j0369632125J8YQ293 ENCSR000ASH https://www.encodeproject.org/experiments/ENCSR000ASH "histone,histone modification,narrow histone mark" H3K4me3-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF113KAL https://www.encodeproject.org/files/ENCFF113KAL/@@download/ENCFF113KAL.bam ENCFF689TXP https://www.encodeproject.org/files/ENCFF689TXP/@@download/ENCFF689TXP.bam 86.0 M 0 84.7 M 0.984 SE 36 36 native 0.0 M 65.5 M 57.2 M 0.665 0.88 0.89 9.43 225 1.22 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3701ef2-a481-4958-bb0a-ceea4e9c49dd/@@download/cross_correlation_plot/ENCFF000AJX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFI ENCFF000AJX HiSeq 2000 2016-08-12T15:07:43.304443+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byff0G803690B6jpkQ85z80J ENCSR000ASH https://www.encodeproject.org/experiments/ENCSR000ASH "histone,histone modification,narrow histone mark" H3K4me3-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF828TRR https://www.encodeproject.org/files/ENCFF828TRR/@@download/ENCFF828TRR.bam ENCFF970WKG https://www.encodeproject.org/files/ENCFF970WKG/@@download/ENCFF970WKG.bam 29.9 M 0 28.1 M 0.940 SE 36 36 native 0.0 M 23.3 M 6.6 M 0.221 0.31 0.32 1.82 200 1.60 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/8222787b-df41-4314-9ba3-c9fa0d3c9ea4/@@download/cross_correlation_plot/ENCFF000AJT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFJ ENCFF000AJT HiSeq 2000 2016-08-12T15:04:40.440369+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byff0KQ03699bQvJzG86q4J7 ENCSR000AST https://www.encodeproject.org/experiments/ENCSR000AST "histone,histone modification,narrow histone mark" H3K4me3-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF006OBK https://www.encodeproject.org/files/ENCFF006OBK/@@download/ENCFF006OBK.bam ENCFF688DMC https://www.encodeproject.org/files/ENCFF688DMC/@@download/ENCFF688DMC.bam 31.5 M 0 30.1 M 0.955 SE 36 36 native 0.0 M 24.4 M 21.8 M 0.691 0.91 0.91 11.68 190 1.58 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/c31e2bf0-cbd1-4dd0-882b-a17d4788367f/@@download/cross_correlation_plot/ENCFF000AJN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABG ENCFF000AJN HiSeq 2000 2016-08-12T15:04:28.205780+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byfbzy00369K8qg1YZ8229kG ENCSR000AST https://www.encodeproject.org/experiments/ENCSR000AST "histone,histone modification,narrow histone mark" H3K4me3-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF556ZTV https://www.encodeproject.org/files/ENCFF556ZTV/@@download/ENCFF556ZTV.bam ENCFF335MIW https://www.encodeproject.org/files/ENCFF335MIW/@@download/ENCFF335MIW.bam 40.1 M 0 33.4 M 0.834 SE 36 36 native 0.0 M 26.9 M 12.5 M 0.311 0.50 0.48 1.91 205 1.44 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/dabeace2-1ab1-4f84-9c41-7748111ea131/@@download/cross_correlation_plot/ENCFF000AJP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGZ ENCFF000AJP HiSeq 2000 2016-08-12T15:04:36.108200+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byff00j0369Gyv30jj89kZP5 ENCSR000ASU https://www.encodeproject.org/experiments/ENCSR000ASU "histone,histone modification,broad histone mark" H3K79me2-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF279BXB https://www.encodeproject.org/files/ENCFF279BXB/@@download/ENCFF279BXB.bam ENCFF586OMW https://www.encodeproject.org/files/ENCFF586OMW/@@download/ENCFF586OMW.bam 28.0 M 0 27.2 M 0.972 SE 36 36 native 0.0 M 21.6 M 20.5 M 0.733 0.95 0.95 21.99 190 1.08 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/648a5ced-ad71-47f3-af63-592a51f41b2a/@@download/cross_correlation_plot/ENCFF000ALT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADQ ENCFF000ALT HiSeq 2000 2016-11-13T00:46:26.378646+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgkF803696q4yFJZ9QQGV7 ENCSR000ASU https://www.encodeproject.org/experiments/ENCSR000ASU "histone,histone modification,broad histone mark" H3K79me2-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF428OET https://www.encodeproject.org/files/ENCFF428OET/@@download/ENCFF428OET.bam ENCFF588PHA https://www.encodeproject.org/files/ENCFF588PHA/@@download/ENCFF588PHA.bam 20.7 M 0 20.1 M 0.972 SE 36 36 native 0.0 M 16.0 M 14.1 M 0.678 0.88 0.88 8.28 180 1.07 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/69efa465-4d11-4524-993c-f3803c839606/@@download/cross_correlation_plot/ENCFF000ALV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADR ENCFF000ALV HiSeq 2000 2016-11-13T00:45:50.180874+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgkPj03697qX9798yZFQ4y ENCSR000ATP https://www.encodeproject.org/experiments/ENCSR000ATP "histone,histone modification,broad histone mark" H3K79me2-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF590UZR https://www.encodeproject.org/files/ENCFF590UZR/@@download/ENCFF590UZR.bam ENCFF348RKN https://www.encodeproject.org/files/ENCFF348RKN/@@download/ENCFF348RKN.bam 63.8 M 0 61.7 M 0.966 SE 36 36 native 0.0 M 48.1 M 44.7 M 0.701 0.94 0.94 17.34 200 1.06 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/0310f8e1-ff83-417c-9610-540278dcdeca/@@download/cross_correlation_plot/ENCFF000AMD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AES ENCFF000AMD HiSeq 2000 2016-11-13T02:19:34.852042+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygp7j0369632125J8YQ262 ENCSR000ATP https://www.encodeproject.org/experiments/ENCSR000ATP "histone,histone modification,broad histone mark" H3K79me2-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF765DGW https://www.encodeproject.org/files/ENCFF765DGW/@@download/ENCFF765DGW.bam ENCFF926BNY https://www.encodeproject.org/files/ENCFF926BNY/@@download/ENCFF926BNY.bam 36.6 M 0 19.9 M 0.544 SE 36 36 native 0.0 M 15.3 M 5.6 M 0.154 0.49 0.48 1.98 175 1.11 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/036fd94b-36bd-4226-94f9-7e03abeadba0/@@download/cross_correlation_plot/ENCFF000AMB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AER ENCFF000AMB HiSeq 2000 2016-11-13T00:45:55.298868+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgpG803691jKGBVGv8zgzK ENCSR000ASV https://www.encodeproject.org/experiments/ENCSR000ASV "histone,histone modification,narrow histone mark" H3K9ac-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF940UIA https://www.encodeproject.org/files/ENCFF940UIA/@@download/ENCFF940UIA.bam ENCFF419VJQ https://www.encodeproject.org/files/ENCFF419VJQ/@@download/ENCFF419VJQ.bam 49.7 M 0 46.7 M 0.938 SE 36 36 native 0.0 M 38.5 M 32.9 M 0.661 0.88 0.88 9.07 225 1.41 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/682950cd-6d38-427e-8bb7-b96dbfdd52a7/@@download/cross_correlation_plot/ENCFF000AJZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJQ ENCFF000AJZ HiSeq 2000 2016-11-13T02:19:33.353495+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygkb003697qX9798yZFQ56 ENCSR000ASV https://www.encodeproject.org/experiments/ENCSR000ASV "histone,histone modification,narrow histone mark" H3K9ac-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF594ECE https://www.encodeproject.org/files/ENCFF594ECE/@@download/ENCFF594ECE.bam ENCFF945JBC https://www.encodeproject.org/files/ENCFF945JBC/@@download/ENCFF945JBC.bam 18.5 M 0 17.3 M 0.939 SE 36 36 native 0.0 M 15.0 M 7.0 M 0.376 0.48 0.45 1.75 270 1.78 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd6868bd-b31a-41b6-a663-5ef9825f062e/@@download/cross_correlation_plot/ENCFF000AJY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJP ENCFF000AJY HiSeq 2000 2016-11-13T00:45:42.396983+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygkk803697qX9798yZFQ5P ENCSR000AUN https://www.encodeproject.org/experiments/ENCSR000AUN "histone,histone modification,broad histone mark" H3K9me3-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF219PFS https://www.encodeproject.org/files/ENCFF219PFS/@@download/ENCFF219PFS.bam 93.4 M 0 88.8 M 0.951 SE 36 36 native 0.0 M 57.0 M 51.6 M 0.553 0.91 0.91 11.59 235 1.02 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/99c299fe-b0c1-472b-80ff-684632117035/@@download/cross_correlation_plot/ENCFF000AKK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANF ENCFF000AKK HiSeq 2000 2017-02-11T01:52:46.892118+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgvQQ03691P396yvzqkz8p ENCSR000AUN https://www.encodeproject.org/experiments/ENCSR000AUN "histone,histone modification,broad histone mark" H3K9me3-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF420BRU https://www.encodeproject.org/files/ENCFF420BRU/@@download/ENCFF420BRU.bam ENCFF330FBC https://www.encodeproject.org/files/ENCFF330FBC/@@download/ENCFF330FBC.bam 41.3 M 0 40.0 M 0.967 SE 36 36 native 0.0 M 27.4 M 25.9 M 0.626 0.95 0.95 20.47 310 1.01 0.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/aac63c8e-0dc8-4e58-8ded-5269f74421db/@@download/cross_correlation_plot/ENCFF000AKG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMI ENCFF000AKG HiSeq 2000 2016-11-13T00:46:00.956008+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygvf803691jKGBVGv8zj12 ENCSR000AUO https://www.encodeproject.org/experiments/ENCSR000AUO "histone,histone modification,broad histone mark" H4K20me1-human A549 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF223LQX https://www.encodeproject.org/files/ENCFF223LQX/@@download/ENCFF223LQX.bam ENCFF891UWW https://www.encodeproject.org/files/ENCFF891UWW/@@download/ENCFF891UWW.bam 39.9 M 0 38.4 M 0.964 SE 36 36 native 0.0 M 29.2 M 28.0 M 0.701 0.96 0.96 27.16 245 1.02 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/8138a410-d4f0-4c9b-9a57-f22559822a06/@@download/cross_correlation_plot/ENCFF000AME.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASB ENCFF000AME HiSeq 2000 2016-11-13T00:45:59.998738+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgvvQ03690GY00B90p73BV ENCSR000AUO https://www.encodeproject.org/experiments/ENCSR000AUO "histone,histone modification,broad histone mark" H4K20me1-human A549 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF281XOW https://www.encodeproject.org/files/ENCFF281XOW/@@download/ENCFF281XOW.bam ENCFF869VGU https://www.encodeproject.org/files/ENCFF869VGU/@@download/ENCFF869VGU.bam 22.6 M 0 20.5 M 0.909 SE 36 36 native 0.0 M 15.2 M 12.3 M 0.542 0.82 0.82 5.41 240 1.03 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/a43d079f-66ee-4ad4-b37a-6d82909e80e8/@@download/cross_correlation_plot/ENCFF000AMF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASC ENCFF000AMF HiSeq 2000 2016-11-13T00:45:00.013782+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygx2j0369JbJXk4G78J5g3 ENCSR659LJJ https://www.encodeproject.org/experiments/ENCSR659LJJ "transcription factor,chromatin remodeller" HDAC2-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF865TZQ https://www.encodeproject.org/files/ENCFF865TZQ/@@download/ENCFF865TZQ.bam ENCFF824VMP https://www.encodeproject.org/files/ENCFF824VMP/@@download/ENCFF824VMP.bam 40.6 M 0 39.1 M 0.964 SE 76 76 None 0.0 M 34.4 M 31.9 M 0.785 0.93 0.93 14.56 180 1.01 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/f36b4df3-3cf8-4481-9f56-a1a86af7333e/@@download/cross_correlation_plot/ENCFF735IUI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556KTF bradley-bernstein:DNA_Lib 7142 ENCFF735IUI HiSeq 2500 2016-06-30T17:26:02.161035+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvY4003698YQ49Xb7p2b96 ENCSR659LJJ https://www.encodeproject.org/experiments/ENCSR659LJJ "transcription factor,chromatin remodeller" HDAC2-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF364GLZ https://www.encodeproject.org/files/ENCFF364GLZ/@@download/ENCFF364GLZ.bam ENCFF380YDR https://www.encodeproject.org/files/ENCFF380YDR/@@download/ENCFF380YDR.bam 32.0 M 0 30.9 M 0.967 SE 76 76 None 0.0 M 27.3 M 25.9 M 0.808 0.95 0.95 20.75 165 1.02 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/67f16134-c63d-4b1a-8e3e-e3aab07133a0/@@download/cross_correlation_plot/ENCFF093KEW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB157FBK bradley-bernstein:DNA_Lib 6986 ENCFF093KEW HiSeq 2500 2016-06-30T17:24:34.200968+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvY6j03698YQ49Xb7p2b9K ENCSR639GWS https://www.encodeproject.org/experiments/ENCSR639GWS "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF453IQG https://www.encodeproject.org/files/ENCFF453IQG/@@download/ENCFF453IQG.bam ENCFF061KAM https://www.encodeproject.org/files/ENCFF061KAM/@@download/ENCFF061KAM.bam 23.6 M 0 22.9 M 0.971 SE 76 76 None 0.0 M 20.3 M 17.2 M 0.729 0.85 0.84 6.18 190 1.04 2.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a6059a9-7f6f-42ed-8e5f-b4dc145f63ee/@@download/cross_correlation_plot/ENCFF372SMO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB017ZHO bradley-bernstein:DNA_Lib 7006 ENCFF372SMO HiSeq 2500 2016-06-30T17:22:08.660901+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvYpj0369Fqzv9B81X79bf ENCSR639GWS https://www.encodeproject.org/experiments/ENCSR639GWS "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF262EDN https://www.encodeproject.org/files/ENCFF262EDN/@@download/ENCFF262EDN.bam ENCFF440KLL https://www.encodeproject.org/files/ENCFF440KLL/@@download/ENCFF440KLL.bam 99.0 M 0 94.1 M 0.950 SE 76 76 None 0.0 M 82.2 M 73.1 M 0.738 0.89 0.89 9.23 200 1.01 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/01389d19-af62-4b21-926e-7669ffa4bfa2/@@download/cross_correlation_plot/ENCFF360YKR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB719JOV bradley-bernstein:DNA_Lib 7149 ENCFF360YKR HiSeq 2500 2016-06-30T17:30:26.424975+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZ1j03693Zb4P6xpxxbqP ENCSR933MHJ https://www.encodeproject.org/experiments/ENCSR933MHJ "transcription factor,chromatin remodeller" KDM5A-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF497DEZ https://www.encodeproject.org/files/ENCFF497DEZ/@@download/ENCFF497DEZ.bam ENCFF889YXR https://www.encodeproject.org/files/ENCFF889YXR/@@download/ENCFF889YXR.bam 47.0 M 0 45.8 M 0.976 SE 76 76 None 0.0 M 40.5 M 38.3 M 0.815 0.95 0.95 18.56 220 1.02 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/34ca44fd-8b11-4898-9b22-973ae74b19d0/@@download/cross_correlation_plot/ENCFF564QJZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB576JMI bradley-bernstein:DNA_Lib 7319 ENCFF564QJZ HiSeq 2500 2016-06-30T17:24:34.819569+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZ4Q036960jj23bp11B93 ENCSR933MHJ https://www.encodeproject.org/experiments/ENCSR933MHJ "transcription factor,chromatin remodeller" KDM5A-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF659WLX https://www.encodeproject.org/files/ENCFF659WLX/@@download/ENCFF659WLX.bam ENCFF931PQA https://www.encodeproject.org/files/ENCFF931PQA/@@download/ENCFF931PQA.bam 31.5 M 0 30.2 M 0.959 SE 76 76 None 0.0 M 26.9 M 23.5 M 0.745 0.87 0.88 7.84 170 1.04 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/55bab1a7-9548-425b-9a6c-1aa3b1239990/@@download/cross_correlation_plot/ENCFF883YYR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB740QXD bradley-bernstein:DNA_Lib 7012 ENCFF883YYR HiSeq 2500 2016-06-30T17:22:51.266436+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZ7003693Zb4P6xpxxbqk ENCSR541AOQ https://www.encodeproject.org/experiments/ENCSR541AOQ "transcription factor,chromatin remodeller,RNA binding protein" PHF8-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF961XMG https://www.encodeproject.org/files/ENCFF961XMG/@@download/ENCFF961XMG.bam ENCFF761DRI https://www.encodeproject.org/files/ENCFF761DRI/@@download/ENCFF761DRI.bam 101.6 M 0 97.4 M 0.959 SE 76 76 None 0.0 M 86.2 M 64.8 M 0.639 0.75 0.74 3.60 175 1.02 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/d13866a8-796b-48b2-ae43-e4d4fd16ea33/@@download/cross_correlation_plot/ENCFF319DTT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB202COI bradley-bernstein:DNA_Lib 7320 ENCFF319DTT HiSeq 2500 2016-06-30T17:32:29.791934+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZ9j03693gbZ2XvPBXJv4 ENCSR541AOQ https://www.encodeproject.org/experiments/ENCSR541AOQ "transcription factor,chromatin remodeller,RNA binding protein" PHF8-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF685SJB https://www.encodeproject.org/files/ENCFF685SJB/@@download/ENCFF685SJB.bam ENCFF842USN https://www.encodeproject.org/files/ENCFF842USN/@@download/ENCFF842USN.bam 17.9 M 0 17.3 M 0.961 SE 76 76 None 0.0 M 15.3 M 14.8 M 0.822 0.97 0.97 34.71 190 1.03 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/a54801dc-6df5-4d6c-9964-3483e24ffe7c/@@download/cross_correlation_plot/ENCFF062BQQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB642SYY bradley-bernstein:DNA_Lib 7065 ENCFF062BQQ HiSeq 2500 2016-06-30T17:22:14.999326+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZFj03693Zb4P6xpxxbv7 ENCSR892DRK https://www.encodeproject.org/experiments/ENCSR892DRK "transcription factor,chromatin remodeller" REST-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF364NWO https://www.encodeproject.org/files/ENCFF364NWO/@@download/ENCFF364NWO.bam ENCFF817LMJ https://www.encodeproject.org/files/ENCFF817LMJ/@@download/ENCFF817LMJ.bam 35.1 M 0 33.8 M 0.964 SE 76 76 None 0.0 M 30.2 M 21.8 M 0.623 0.73 0.71 3.21 165 1.11 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4f548ca-184b-47c4-a12f-2d7c04a852e2/@@download/cross_correlation_plot/ENCFF137XSL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB133LGP bradley-bernstein:DNA_Lib 7010 ENCFF137XSL HiSeq 2500 2016-06-30T17:22:59.826395+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZZ00369J31Q0Pkv5xpF6 ENCSR892DRK https://www.encodeproject.org/experiments/ENCSR892DRK "transcription factor,chromatin remodeller" REST-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF808ADX https://www.encodeproject.org/files/ENCFF808ADX/@@download/ENCFF808ADX.bam ENCFF559SXA https://www.encodeproject.org/files/ENCFF559SXA/@@download/ENCFF559SXA.bam 91.7 M 0 88.0 M 0.959 SE 76 76 None 0.0 M 78.1 M 62.1 M 0.676 0.80 0.79 4.65 215 1.04 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/090e7cc3-688f-48f7-86c1-176b6712be71/@@download/cross_correlation_plot/ENCFF240SSO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB804HNS bradley-bernstein:DNA_Lib 7323 ENCFF240SSO HiSeq 2500 2016-06-30T17:31:27.579781+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZf80369J04b0ZkqXbZ4y ENCSR798EGJ https://www.encodeproject.org/experiments/ENCSR798EGJ "transcription factor,chromatin remodeller" RNF2-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF580OKG https://www.encodeproject.org/files/ENCFF580OKG/@@download/ENCFF580OKG.bam ENCFF106ATR https://www.encodeproject.org/files/ENCFF106ATR/@@download/ENCFF106ATR.bam 24.9 M 0 23.9 M 0.957 SE 76 76 None 0.0 M 21.1 M 19.0 M 0.763 0.91 0.91 10.78 190 1.02 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/d94e5b69-da45-4c4d-9946-489f82eed7b5/@@download/cross_correlation_plot/ENCFF257STC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB795RFC bradley-bernstein:DNA_Lib 7148 ENCFF257STC HiSeq 2500 2016-06-30T17:22:32.621260+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZk003693Zb4P6xpxxbvb ENCSR798EGJ https://www.encodeproject.org/experiments/ENCSR798EGJ "transcription factor,chromatin remodeller" RNF2-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF804DKC https://www.encodeproject.org/files/ENCFF804DKC/@@download/ENCFF804DKC.bam ENCFF824ZHA https://www.encodeproject.org/files/ENCFF824ZHA/@@download/ENCFF824ZHA.bam 39.0 M 0 37.5 M 0.962 SE 76 76 None 0.0 M 33.5 M 18.9 M 0.483 0.57 0.52 1.82 185 1.08 3.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdbf45bf-d081-48fa-8cf6-4486a416cb17/@@download/cross_correlation_plot/ENCFF777KUN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB576KOQ bradley-bernstein:DNA_Lib 7008 ENCFF777KUN HiSeq 2500 2016-06-30T17:22:33.169307+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZq8036960jj23bp11B9K ENCSR740DXC https://www.encodeproject.org/experiments/ENCSR740DXC "RNA binding protein,chromatin remodeller" WDR5-human A549 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF022AVT https://www.encodeproject.org/files/ENCFF022AVT/@@download/ENCFF022AVT.bam ENCFF588GTV https://www.encodeproject.org/files/ENCFF588GTV/@@download/ENCFF588GTV.bam 20.6 M 0 20.0 M 0.970 SE 76 76 None 0.0 M 17.7 M 17.4 M 0.846 0.99 0.99 85.06 205 1.01 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/8261bc15-a5bc-466e-ac70-d64668f2da84/@@download/cross_correlation_plot/ENCFF495VBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB634MKD bradley-bernstein:DNA_Lib 7066 ENCFF495VBF HiSeq 2500 2016-06-30T17:22:05.606590+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvZy0036960jj23bp11B9g ENCSR740DXC https://www.encodeproject.org/experiments/ENCSR740DXC "RNA binding protein,chromatin remodeller" WDR5-human A549 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF504VII https://www.encodeproject.org/files/ENCFF504VII/@@download/ENCFF504VII.bam ENCFF762SRY https://www.encodeproject.org/files/ENCFF762SRY/@@download/ENCFF762SRY.bam 82.3 M 0 79.1 M 0.961 SE 76 76 None 0.0 M 69.8 M 66.5 M 0.808 0.95 0.95 22.15 210 1.01 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e8c33eb-7ad2-4c54-98d9-e235e64dae25/@@download/cross_correlation_plot/ENCFF370NAO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB845IDR bradley-bernstein:DNA_Lib 7321 ENCFF370NAO HiSeq 2500 2016-06-30T17:29:19.178376+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvb0Q036960jj23bp11B9z ENCSR196CXJ https://www.encodeproject.org/experiments/ENCSR196CXJ control Control-human A673 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF742FFC https://www.encodeproject.org/files/ENCFF742FFC/@@download/ENCFF742FFC.bam ENCFF487JOS https://www.encodeproject.org/files/ENCFF487JOS/@@download/ENCFF487JOS.bam 123.8 M 0 113.9 M 0.920 SE 36 36 36 0.0 M 85.0 M 67.1 M 0.542 0.81 0.81 5.24 175 1.01 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f158cdf-4ca3-4ef7-ac1d-c3dcf38424d0/@@download/cross_correlation_plot/ENCFF885SBP-ENCFF061PAW_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB439WBE,ENCLB845XOY" "bradley-bernstein:DNA_Lib 919,bradley-bernstein:DNA_Lib 915" "ENCFF885SBP,ENCFF061PAW" HiSeq 2000 2016-08-09T16:54:43.020409+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7g803697XQQZkv2f4gZp ENCSR196CXJ https://www.encodeproject.org/experiments/ENCSR196CXJ control Control-human A673 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF170UTG https://www.encodeproject.org/files/ENCFF170UTG/@@download/ENCFF170UTG.bam ENCFF487JOS https://www.encodeproject.org/files/ENCFF487JOS/@@download/ENCFF487JOS.bam 123.8 M 0 113.9 M 0.920 SE 36 36 native 0.0 M 85.0 M 67.1 M 0.542 0.81 0.81 5.24 190 1.01 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7ed471d-204e-4a07-9311-9c74c187b935/@@download/cross_correlation_plot/ENCFF885SBP-ENCFF061PAW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB439WBE,ENCLB845XOY" "bradley-bernstein:DNA_Lib 919,bradley-bernstein:DNA_Lib 915" "ENCFF885SBP,ENCFF061PAW" HiSeq 2000 2017-01-11T04:32:03.571578+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1pfqvj0369BJ5396y4GXpzz ENCSR196CXJ https://www.encodeproject.org/experiments/ENCSR196CXJ control Control-human A673 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF567KKK https://www.encodeproject.org/files/ENCFF567KKK/@@download/ENCFF567KKK.bam ENCFF102QXA https://www.encodeproject.org/files/ENCFF102QXA/@@download/ENCFF102QXA.bam 36.2 M 0 34.8 M 0.963 SE 76 36 36 0.0 M 26.7 M 25.0 M 0.691 0.94 0.94 15.85 185 1.01 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/0be7e01a-6c10-4bf5-b2d2-036b973e397d/@@download/cross_correlation_plot/ENCFF853HFC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB017BXD bradley-bernstein:DNA_Lib 6944 ENCFF853HFC HiSeq 2500 2016-08-09T22:44:56.153066+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07B6x803690z3vkY43yXJQ9 ENCSR714TJD https://www.encodeproject.org/experiments/ENCSR714TJD "histone,histone modification,narrow histone mark" H3K27ac-human A673 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF737FZT https://www.encodeproject.org/files/ENCFF737FZT/@@download/ENCFF737FZT.bam ENCFF313TDL https://www.encodeproject.org/files/ENCFF313TDL/@@download/ENCFF313TDL.bam 20.5 M 0 20.1 M 0.982 SE 76 36 36 0.0 M 16.3 M 15.5 M 0.757 0.95 0.95 19.53 230 1.12 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/86c3f75d-c3ac-4283-bb5f-cbaa2255d29f/@@download/cross_correlation_plot/ENCFF246GBE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB823XKP bradley-bernstein:DNA_Lib 6937 ENCFF246GBE HiSeq 2500 2016-10-25T05:05:40.036200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07BBpj03694vk27y104vyKg ENCSR714TJD https://www.encodeproject.org/experiments/ENCSR714TJD "histone,histone modification,narrow histone mark" H3K27ac-human A673 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF918ACD https://www.encodeproject.org/files/ENCFF918ACD/@@download/ENCFF918ACD.bam ENCFF501QCN https://www.encodeproject.org/files/ENCFF501QCN/@@download/ENCFF501QCN.bam 56.5 M 0 52.7 M 0.932 SE 36 36 native 0.0 M 42.7 M 16.0 M 0.283 0.43 0.42 1.85 250 1.28 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/48f20359-145a-42cf-937e-5c32fc5e6989/@@download/cross_correlation_plot/ENCFF350YIV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB606JWW bradley-bernstein:DNA_Lib 920 ENCFF350YIV HiSeq 2000 2016-10-19T16:34:13.723167+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q6P00369KgxPbx50X8QqB ENCSR747BYL https://www.encodeproject.org/experiments/ENCSR747BYL "histone,histone modification,broad histone mark" H3K27me3-human A673 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF406AQZ https://www.encodeproject.org/files/ENCFF406AQZ/@@download/ENCFF406AQZ.bam ENCFF908CIC https://www.encodeproject.org/files/ENCFF908CIC/@@download/ENCFF908CIC.bam 161.0 M 0 137.5 M 0.854 SE "76,36" 36 36 0.0 M 107.5 M 28.2 M 0.175 0.28 0.61 4.28 190 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e4e0741-1485-4877-8685-c17c2ef45130/@@download/cross_correlation_plot/ENCFF807OXX-ENCFF869KSG-ENCFF561VTH_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB600ZPF bradley-bernstein:DNA_Lib 917 "ENCFF561VTH,ENCFF869KSG,ENCFF807OXX" "HiSeq 2000,HiSeq 2500" 2016-10-25T16:56:41.550492+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079pk803696Y9jfbG3VZY7Q ENCSR747BYL https://www.encodeproject.org/experiments/ENCSR747BYL "histone,histone modification,broad histone mark" H3K27me3-human A673 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF480BYU https://www.encodeproject.org/files/ENCFF480BYU/@@download/ENCFF480BYU.bam ENCFF171PYT https://www.encodeproject.org/files/ENCFF171PYT/@@download/ENCFF171PYT.bam 52.6 M 0 50.8 M 0.966 SE 76 36 36 0.0 M 39.9 M 33.0 M 0.627 0.83 0.82 5.57 190 1.03 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf7f5e7c-d4b2-4fb4-bd48-e2c26f324b34/@@download/cross_correlation_plot/ENCFF708XHD-ENCFF136PTA-ENCFF332WSR_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB268GQB bradley-bernstein:DNA_Lib 6936 "ENCFF708XHD,ENCFF332WSR,ENCFF136PTA" HiSeq 2500 2016-10-25T03:12:42.794337+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F057zKj03692zXjp9j3FpyY2 ENCSR581PUR https://www.encodeproject.org/experiments/ENCSR581PUR "histone,histone modification,broad histone mark" H3K36me3-human A673 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF161MRF https://www.encodeproject.org/files/ENCFF161MRF/@@download/ENCFF161MRF.bam ENCFF612WJT https://www.encodeproject.org/files/ENCFF612WJT/@@download/ENCFF612WJT.bam 30.9 M 0 29.6 M 0.958 SE 76 36 36 0.0 M 22.1 M 21.2 M 0.685 0.96 0.96 23.62 215 1.02 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd2675eb-9b3c-42fd-b73d-482f8b3755e1/@@download/cross_correlation_plot/ENCFF438MMK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB244JDS bradley-bernstein:DNA_Lib 6938 ENCFF438MMK HiSeq 2500 2016-10-25T03:13:50.668445+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0580x003693fqZYX43J0jFx ENCSR581PUR https://www.encodeproject.org/experiments/ENCSR581PUR "histone,histone modification,broad histone mark" H3K36me3-human A673 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF997SEF https://www.encodeproject.org/files/ENCFF997SEF/@@download/ENCFF997SEF.bam ENCFF261TAR https://www.encodeproject.org/files/ENCFF261TAR/@@download/ENCFF261TAR.bam 44.7 M 0 40.6 M 0.910 SE 36 36 native 0.0 M 30.9 M 7.1 M 0.159 0.28 0.31 2.10 190 1.07 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cb4ee93-b3ba-4a8a-843e-a96cb6959aba/@@download/cross_correlation_plot/ENCFF170GQM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB332YQI bradley-bernstein:DNA_Lib 923 ENCFF170GQM HiSeq 2000 2016-10-19T16:33:16.383583+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q66j0369KgxPbx50X8Qq2 ENCSR521IZK https://www.encodeproject.org/experiments/ENCSR521IZK "histone,histone modification,broad histone mark" H3K4me1-human A673 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF817DJO https://www.encodeproject.org/files/ENCFF817DJO/@@download/ENCFF817DJO.bam ENCFF719QCU https://www.encodeproject.org/files/ENCFF719QCU/@@download/ENCFF719QCU.bam 19.0 M 0 18.3 M 0.961 SE 76 36 36 0.0 M 15.2 M 14.0 M 0.737 0.93 0.93 13.47 220 1.06 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/ccec07cc-611c-4175-97e7-5fa49e471986/@@download/cross_correlation_plot/ENCFF427MFJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB933YRT bradley-bernstein:DNA_Lib 6934 ENCFF427MFJ HiSeq 2500 2016-10-25T03:16:18.982589+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0582780369KX9pyqj5BPV3G ENCSR521IZK https://www.encodeproject.org/experiments/ENCSR521IZK "histone,histone modification,broad histone mark" H3K4me1-human A673 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF335OTW https://www.encodeproject.org/files/ENCFF335OTW/@@download/ENCFF335OTW.bam ENCFF634LFX https://www.encodeproject.org/files/ENCFF634LFX/@@download/ENCFF634LFX.bam 53.8 M 0 49.6 M 0.922 SE 36 36 native 0.0 M 41.8 M 7.6 M 0.142 0.23 0.30 2.44 240 1.15 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5ca4b90-0ada-4070-ad65-e1723569c556/@@download/cross_correlation_plot/ENCFF812FRO-ENCFF098TQN-ENCFF321JKM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB042JCS bradley-bernstein:DNA_Lib 8296 "ENCFF321JKM,ENCFF812FRO,ENCFF098TQN" HiSeq 2000 2016-10-19T16:32:01.661720+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q5g80369Ppk4kkb0Xj28f ENCSR435FGK https://www.encodeproject.org/experiments/ENCSR435FGK "histone,histone modification,narrow histone mark" H3K4me3-human A673 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF443HXD https://www.encodeproject.org/files/ENCFF443HXD/@@download/ENCFF443HXD.bam ENCFF824ESQ https://www.encodeproject.org/files/ENCFF824ESQ/@@download/ENCFF824ESQ.bam 66.2 M 0 59.4 M 0.898 SE 36 36 native 0.0 M 51.8 M 15.4 M 0.232 0.37 0.40 1.95 265 2.44 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/309ab62e-a872-4134-9dcc-e06feb3d21e2/@@download/cross_correlation_plot/ENCFF155AHX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB694WYI bradley-bernstein:DNA_Lib 921 ENCFF155AHX HiSeq 2000 2016-10-19T05:19:26.034496+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039z5Q0369PZZQgy5GJb2kJ ENCSR435FGK https://www.encodeproject.org/experiments/ENCSR435FGK "histone,histone modification,narrow histone mark" H3K4me3-human A673 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF275NPO https://www.encodeproject.org/files/ENCFF275NPO/@@download/ENCFF275NPO.bam ENCFF252JKF https://www.encodeproject.org/files/ENCFF252JKF/@@download/ENCFF252JKF.bam 23.2 M 0 22.6 M 0.977 SE 76 36 36 0.0 M 17.7 M 16.7 M 0.720 0.94 0.94 17.74 215 1.13 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/0b3c5630-d847-4c11-8501-3f2cc8433880/@@download/cross_correlation_plot/ENCFF859CLK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB631AHN bradley-bernstein:DNA_Lib 6935 ENCFF859CLK HiSeq 2500 2016-10-25T03:09:12.224692+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F040qpj036966q8FpVPpzpF4 ENCSR988EGR https://www.encodeproject.org/experiments/ENCSR988EGR "histone,histone modification,broad histone mark" H3K9me3-human A673 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF735KIR https://www.encodeproject.org/files/ENCFF735KIR/@@download/ENCFF735KIR.bam ENCFF854FVU https://www.encodeproject.org/files/ENCFF854FVU/@@download/ENCFF854FVU.bam 60.7 M 0 52.2 M 0.861 SE 36 36 native 0.0 M 26.0 M 9.4 M 0.155 0.40 0.40 1.87 205 1.06 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/7488e9ac-2523-48f4-ad22-299e874c9247/@@download/cross_correlation_plot/ENCFF200TEA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB883UWA bradley-bernstein:DNA_Lib 918 ENCFF200TEA HiSeq 2000 2016-10-19T16:27:30.001146+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q5KQ036936gYVx5x8X9Bp ENCSR988EGR https://www.encodeproject.org/experiments/ENCSR988EGR "histone,histone modification,broad histone mark" H3K9me3-human A673 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF278CCM https://www.encodeproject.org/files/ENCFF278CCM/@@download/ENCFF278CCM.bam ENCFF926QST https://www.encodeproject.org/files/ENCFF926QST/@@download/ENCFF926QST.bam 39.1 M 0 38.1 M 0.974 SE 76 36 36 0.0 M 26.1 M 24.8 M 0.634 0.95 0.95 20.25 195 1.02 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/742184f9-fc8f-4e86-b13f-7badc1627955/@@download/cross_correlation_plot/ENCFF332FGA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB302PXN bradley-bernstein:DNA_Lib 6940 ENCFF332FGA HiSeq 2500 2016-10-25T03:17:57.375217+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0582bQ0369KX9pyqj5BPV3g ENCSR836XKP https://www.encodeproject.org/experiments/ENCSR836XKP control Control-human ACC112 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF994UEQ https://www.encodeproject.org/files/ENCFF994UEQ/@@download/ENCFF994UEQ.bam ENCFF230XRK https://www.encodeproject.org/files/ENCFF230XRK/@@download/ENCFF230XRK.bam 68.1 M 0 66.6 M 0.978 SE "76,36" 36 36 0.0 M 51.2 M 33.7 M 0.494 0.66 0.65 2.70 160 1.02 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3408cff-724a-4bfe-b738-814af8d7bbfa/@@download/cross_correlation_plot/ENCFF137ZTJ-ENCFF800DGE-ENCFF849RAD_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB413RQD,ENCLB169ZDB" "bradley-bernstein:DNA_Lib 7942,bradley-bernstein:DNA_Lib 4183" "ENCFF800DGE,ENCFF849RAD,ENCFF137ZTJ" HiSeq 2500 2016-10-26T04:58:22.766645+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y89Q0369PQyG3V5B44P7x ENCSR836XKP https://www.encodeproject.org/experiments/ENCSR836XKP control Control-human ACC112 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF906YGC https://www.encodeproject.org/files/ENCFF906YGC/@@download/ENCFF906YGC.bam ENCFF988REB https://www.encodeproject.org/files/ENCFF988REB/@@download/ENCFF988REB.bam 139.2 M 0 134.6 M 0.967 SE 76 36 36 0.0 M 102.3 M 48.9 M 0.351 0.48 0.46 1.80 180 1.01 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8023562-0b8f-42cd-8258-30d252e6354f/@@download/cross_correlation_plot/ENCFF205YRD-ENCFF956QDK_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB078QSR bradley-bernstein:DNA_Lib 8136 "ENCFF205YRD,ENCFF956QDK" HiSeq 2500 2016-10-26T23:36:32.548439+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y8Jj0369BX1xqb1B807YQ ENCSR311DQO https://www.encodeproject.org/experiments/ENCSR311DQO "histone,histone modification,narrow histone mark" H2AFZ-human ACC112 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF926PAK https://www.encodeproject.org/files/ENCFF926PAK/@@download/ENCFF926PAK.bam ENCFF602DCE https://www.encodeproject.org/files/ENCFF602DCE/@@download/ENCFF602DCE.bam 30.5 M 0 28.6 M 0.938 SE 36 36 native 0.0 M 23.2 M 21.4 M 0.703 0.93 0.92 13.18 180 1.09 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f977d24-32a1-4e57-b284-93d2c2679ebc/@@download/cross_correlation_plot/ENCFF090FFW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB569TOC bradley-bernstein:DNA_Lib 3923 ENCFF090FFW HiSeq 2500 2016-10-25T21:04:16.269437+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07Jz5Q03692ZB9QBj36jq2J ENCSR059MVB https://www.encodeproject.org/experiments/ENCSR059MVB "histone,histone modification,narrow histone mark" H3K27ac-human ACC112 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF420CUB https://www.encodeproject.org/files/ENCFF420CUB/@@download/ENCFF420CUB.bam ENCFF616OWN https://www.encodeproject.org/files/ENCFF616OWN/@@download/ENCFF616OWN.bam 27.9 M 0 26.9 M 0.965 SE 36 36 native 0.0 M 23.3 M 17.6 M 0.632 0.76 0.76 4.20 195 1.64 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1e13c1e-dac3-4a5e-8c9a-ba44a7918787/@@download/cross_correlation_plot/ENCFF002AZR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB923ITE bradley-bernstein:DNA_Lib 4182 ENCFF002AZR HiSeq 2500 2016-10-25T21:49:09.988174+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JKJ003692zXjp9j3Fqp8V ENCSR059MVB https://www.encodeproject.org/experiments/ENCSR059MVB "histone,histone modification,narrow histone mark" H3K27ac-human ACC112 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF567QOT https://www.encodeproject.org/files/ENCFF567QOT/@@download/ENCFF567QOT.bam ENCFF441TTJ https://www.encodeproject.org/files/ENCFF441TTJ/@@download/ENCFF441TTJ.bam 47.7 M 0 44.8 M 0.941 SE 36 36 native 0.0 M 38.7 M 31.0 M 0.651 0.80 0.82 6.28 205 1.62 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/51035471-35b8-4f6b-a692-1e556bb24307/@@download/cross_correlation_plot/ENCFF002AYM-ENCFF002AWN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB459BIM,ENCLB487IFL" "bradley-bernstein:DNA_Lib 3903,bradley-bernstein:DNA_Lib 3922" "ENCFF002AWN,ENCFF002AYM" HiSeq 2500 2016-10-25T21:48:45.486162+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JKV80369KGyBxbkxpb5F4 ENCSR475NLR https://www.encodeproject.org/experiments/ENCSR475NLR "histone,histone modification,broad histone mark" H3K27me3-human ACC112 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF086FXU https://www.encodeproject.org/files/ENCFF086FXU/@@download/ENCFF086FXU.bam ENCFF208KZA https://www.encodeproject.org/files/ENCFF208KZA/@@download/ENCFF208KZA.bam 25.5 M 0 24.7 M 0.971 SE 36 36 native 0.0 M 19.3 M 14.8 M 0.582 0.77 0.76 3.95 175 1.04 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e446977-21d9-4d3b-ba6d-e852729800fc/@@download/cross_correlation_plot/ENCFF002AWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB247XXA bradley-bernstein:DNA_Lib 4178 ENCFF002AWV HiSeq 2500 2016-10-25T21:49:01.748237+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JJ4Q0369KVXJffZ4987Kg ENCSR475NLR https://www.encodeproject.org/experiments/ENCSR475NLR "histone,histone modification,broad histone mark" H3K27me3-human ACC112 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF316QCM https://www.encodeproject.org/files/ENCFF316QCM/@@download/ENCFF316QCM.bam ENCFF139QDX https://www.encodeproject.org/files/ENCFF139QDX/@@download/ENCFF139QDX.bam 84.9 M 0 79.2 M 0.932 SE "76,36" 36 36 0.0 M 59.7 M 52.0 M 0.612 0.87 0.87 7.52 200 1.02 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/255b97ab-e3dc-4922-be8e-686eee4ca904/@@download/cross_correlation_plot/ENCFF011QMA-ENCFF482AMF-ENCFF002AWO_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556KZE bradley-bernstein:DNA_Lib 3902 "ENCFF002AWO,ENCFF482AMF,ENCFF011QMA" HiSeq 2500 2016-10-26T23:34:53.453337+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0824Q8036923z1QYVBPkq52 ENCSR897FOZ https://www.encodeproject.org/experiments/ENCSR897FOZ "histone,histone modification,broad histone mark" H3K36me3-human ACC112 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF250NWC https://www.encodeproject.org/files/ENCFF250NWC/@@download/ENCFF250NWC.bam ENCFF134MCT https://www.encodeproject.org/files/ENCFF134MCT/@@download/ENCFF134MCT.bam 31.3 M 0 30.2 M 0.964 SE 36 36 36 0.0 M 22.2 M 16.5 M 0.526 0.74 0.74 3.85 190 1.03 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/2555b52b-137e-4fd8-a8fc-266f8445c2cd/@@download/cross_correlation_plot/ENCFF408AHC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB667AMS bradley-bernstein:DNA_Lib 4179 ENCFF408AHC HiSeq 2500 2016-10-26T23:32:23.872247+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826jj0369668063VP6b2f6 ENCSR897FOZ https://www.encodeproject.org/experiments/ENCSR897FOZ "histone,histone modification,broad histone mark" H3K36me3-human ACC112 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF955YUC https://www.encodeproject.org/files/ENCFF955YUC/@@download/ENCFF955YUC.bam ENCFF732QIH https://www.encodeproject.org/files/ENCFF732QIH/@@download/ENCFF732QIH.bam 94.4 M 0 88.7 M 0.940 SE "76,36" 36 36 0.0 M 64.9 M 59.8 M 0.633 0.92 0.92 12.48 180 1.02 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a09616a-a121-4c2d-8fd4-9b68acc42a4f/@@download/cross_correlation_plot/ENCFF278TEK-ENCFF401SOW-ENCFF002AWP_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB190ALY bradley-bernstein:DNA_Lib 3901 "ENCFF002AWP,ENCFF278TEK,ENCFF401SOW" HiSeq 2500 2016-10-26T23:34:10.210179+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826xQ0369Bj2bF0JP9JJp7 ENCSR726ZZX https://www.encodeproject.org/experiments/ENCSR726ZZX "histone,histone modification,broad histone mark" H3K4me1-human ACC112 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF420ANX https://www.encodeproject.org/files/ENCFF420ANX/@@download/ENCFF420ANX.bam ENCFF880ZIL https://www.encodeproject.org/files/ENCFF880ZIL/@@download/ENCFF880ZIL.bam 48.0 M 0 41.0 M 0.854 SE "36,50" 36 36 0.0 M 34.5 M 31.9 M 0.665 0.93 0.93 13.35 205 1.12 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/9db12759-26fa-4d03-afc0-b8ce44b87b55/@@download/cross_correlation_plot/ENCFF228LCQ-ENCFF470CGB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB663RSK bradley-bernstein:DNA_Lib 3899 "ENCFF228LCQ,ENCFF470CGB" HiSeq 2500 2016-10-26T23:32:42.464861+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827Pj03692404175P5Q6z2 ENCSR778VGY https://www.encodeproject.org/experiments/ENCSR778VGY "histone,histone modification,narrow histone mark" H3K4me3-human ACC112 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF338ZVS https://www.encodeproject.org/files/ENCFF338ZVS/@@download/ENCFF338ZVS.bam ENCFF771CSB https://www.encodeproject.org/files/ENCFF771CSB/@@download/ENCFF771CSB.bam 67.6 M 0 64.1 M 0.948 SE 36 36 native 0.0 M 50.3 M 46.7 M 0.690 0.93 0.93 16.08 200 1.26 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2ded2a9-7496-4455-a6b3-c50258d0ddd9/@@download/cross_correlation_plot/ENCFF002BBN-ENCFF002AWS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB910CGH,ENCLB397TBN" "bradley-bernstein:DNA_Lib 3921,bradley-bernstein:DNA_Lib 3904" "ENCFF002AWS,ENCFF002BBN" HiSeq 2500 2016-10-25T21:52:45.055463+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JJbQ0369FG7020ZgQxgP7 ENCSR778VGY https://www.encodeproject.org/experiments/ENCSR778VGY "histone,histone modification,narrow histone mark" H3K4me3-human ACC112 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF785BFN https://www.encodeproject.org/files/ENCFF785BFN/@@download/ENCFF785BFN.bam ENCFF132FVF https://www.encodeproject.org/files/ENCFF132FVF/@@download/ENCFF132FVF.bam 15.1 M 0 14.5 M 0.964 SE 36 36 native 0.0 M 12.8 M 11.3 M 0.747 0.88 0.88 8.79 210 1.76 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb6ab108-c08e-4dd8-874a-ba291c341f39/@@download/cross_correlation_plot/ENCFF002AUB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB910KFT bradley-bernstein:DNA_Lib 4181 ENCFF002AUB HiSeq 2500 2016-10-25T21:48:09.866667+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JJkQ03693fqZYX43J16FV ENCSR741GJT https://www.encodeproject.org/experiments/ENCSR741GJT "histone,histone modification,broad histone mark" H3K79me2-human ACC112 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF084HZX https://www.encodeproject.org/files/ENCFF084HZX/@@download/ENCFF084HZX.bam ENCFF930MAU https://www.encodeproject.org/files/ENCFF930MAU/@@download/ENCFF930MAU.bam 31.2 M 0 29.8 M 0.955 SE 36 36 native 0.0 M 23.2 M 22.5 M 0.720 0.97 0.97 30.94 160 1.06 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/91aff467-f06e-495c-a8fd-8ab0ead1c4d4/@@download/cross_correlation_plot/ENCFF688QSZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB465BUD bradley-bernstein:DNA_Lib 3924 ENCFF688QSZ HiSeq 2500 2016-10-25T21:04:11.168039+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07Jkgj03690JzyxzVJGZFZZ ENCSR043UWF https://www.encodeproject.org/experiments/ENCSR043UWF control Control-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF128CEV https://www.encodeproject.org/files/ENCFF128CEV/@@download/ENCFF128CEV.bam ENCFF941ESK https://www.encodeproject.org/files/ENCFF941ESK/@@download/ENCFF941ESK.bam 53.1 M 0 51.5 M 0.969 SE 76 76 native 0.0 M 45.7 M 43.9 M 0.826 0.97 0.97 36.30 210 1.00 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/ac2cf08d-eee2-4f80-80a8-c0cf9bc9d441/@@download/cross_correlation_plot/ENCFF914QDH-ENCFF415NBZ-ENCFF202XJD-ENCFF294RSN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB909PBO bradley-bernstein:DNA_Lib 8125 "ENCFF415NBZ,ENCFF202XJD,ENCFF294RSN,ENCFF914QDH" HiSeq 2500 2016-10-27T22:02:54.128963+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091VvQ03695YX1xgJBKFxX3 ENCSR754WVA https://www.encodeproject.org/experiments/ENCSR754WVA control Control-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF579ITQ https://www.encodeproject.org/files/ENCFF579ITQ/@@download/ENCFF579ITQ.bam ENCFF782PUV https://www.encodeproject.org/files/ENCFF782PUV/@@download/ENCFF782PUV.bam 41.5 M 0 40.1 M 0.967 SE 76 None 0.0 M 34.7 M 33.9 M 0.818 0.99 0.99 90.10 235 1.01 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/1921b40f-fe9e-4092-a225-a19c07e3fd27/@@download/cross_correlation_plot/ENCFF225QVL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB201QXG bradley-bernstein:DNA_Lib 7355 ENCFF225QVL HiSeq 2500 2016-04-23T06:20:54.779867+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqYjQ0369PPK4xgv2b79QX ENCSR828HXJ https://www.encodeproject.org/experiments/ENCSR828HXJ control Control-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF159PLR https://www.encodeproject.org/files/ENCFF159PLR/@@download/ENCFF159PLR.bam ENCFF758TGR https://www.encodeproject.org/files/ENCFF758TGR/@@download/ENCFF758TGR.bam 65.5 M 0 63.6 M 0.970 SE 76 None 0.0 M 54.8 M 53.2 M 0.812 0.98 0.98 52.76 230 1.01 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcecf4d4-8bac-4cf5-85e9-8977237f6759/@@download/cross_correlation_plot/ENCFF953PQD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB882YGF bradley-bernstein:DNA_Lib 7590 ENCFF953PQD HiSeq 2500 2016-04-23T06:21:07.478817+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqf98036986q4kkQ2Q0Kq8 ENCSR094VJC https://www.encodeproject.org/experiments/ENCSR094VJC "histone,histone modification,narrow histone mark" H3K27ac-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF692SRU https://www.encodeproject.org/files/ENCFF692SRU/@@download/ENCFF692SRU.bam ENCFF404LPT https://www.encodeproject.org/files/ENCFF404LPT/@@download/ENCFF404LPT.bam 33.4 M 0 32.8 M 0.981 SE 74 74 native 0.0 M 29.2 M 26.3 M 0.787 0.90 0.90 10.00 235 1.03 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/591fd729-45fb-4e93-ac35-facb62e99e05/@@download/cross_correlation_plot/ENCFF697BQR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB191XGX bradley-bernstein:DNA_Lib 7335 ENCFF697BQR HiSeq 2500 2016-08-09T16:52:37.383046+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV3P8036900FyV0Q3P2pGb ENCSR177QFY https://www.encodeproject.org/experiments/ENCSR177QFY "histone,histone modification,narrow histone mark" H3K27ac-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF552AFU https://www.encodeproject.org/files/ENCFF552AFU/@@download/ENCFF552AFU.bam ENCFF084EQX https://www.encodeproject.org/files/ENCFF084EQX/@@download/ENCFF084EQX.bam 43.7 M 0 41.9 M 0.958 SE 76 76 native 0.0 M 36.7 M 35.8 M 0.820 0.98 0.98 50.60 255 1.04 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/37c31e32-b8c6-4636-bc77-9d92345e6d13/@@download/cross_correlation_plot/ENCFF396LFR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB281DGJ bradley-bernstein:DNA_Lib 7555 ENCFF396LFR HiSeq 2500 2016-08-09T16:54:06.640465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV3X003696BF6v1Q3BGJQz ENCSR177QFY https://www.encodeproject.org/experiments/ENCSR177QFY "histone,histone modification,narrow histone mark" H3K27ac-human adrenal gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF357WIV https://www.encodeproject.org/files/ENCFF357WIV/@@download/ENCFF357WIV.bam ENCFF310HJV https://www.encodeproject.org/files/ENCFF310HJV/@@download/ENCFF310HJV.bam 31.7 M 0 30.8 M 0.974 SE 76 76 native 0.0 M 27.5 M 26.7 M 0.842 0.97 0.97 38.31 235 1.03 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/53cd7bda-483b-45cd-9cb5-4f95853d3691/@@download/cross_correlation_plot/ENCFF215HBL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB670CFC bradley-bernstein:DNA_Lib 7790 ENCFF215HBL HiSeq 2500 2016-08-09T16:52:29.320014+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV3Z8036900FyV0Q3P2pJ1 ENCSR189QAD https://www.encodeproject.org/experiments/ENCSR189QAD "histone,histone modification,narrow histone mark" H3K27ac-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF994XVP https://www.encodeproject.org/files/ENCFF994XVP/@@download/ENCFF994XVP.bam ENCFF771RQI https://www.encodeproject.org/files/ENCFF771RQI/@@download/ENCFF771RQI.bam 35.5 M 0 32.6 M 0.919 SE 76 76 native 0.0 M 30.7 M 27.3 M 0.769 0.89 0.90 10.55 200 1.57 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/584b9b5c-80c2-4033-8b4c-a93344a5f055/@@download/cross_correlation_plot/ENCFF237XPL-ENCFF667USM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB872HUE bradley-bernstein:DNA_Lib 8146 "ENCFF667USM,ENCFF237XPL" HiSeq 2500 2016-10-31T13:22:44.221532+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8g7j0369Bj2bF0JP9K9pq ENCSR204DMS https://www.encodeproject.org/experiments/ENCSR204DMS "histone,histone modification,broad histone mark" H3K36me3-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF223STI https://www.encodeproject.org/files/ENCFF223STI/@@download/ENCFF223STI.bam ENCFF268PBC https://www.encodeproject.org/files/ENCFF268PBC/@@download/ENCFF268PBC.bam 108.8 M 0 104.6 M 0.961 SE 76 76 native 0.0 M 92.2 M 61.8 M 0.568 0.67 0.65 2.63 200 1.01 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c0b4080-ddf2-438c-95a4-ea94b29c3609/@@download/cross_correlation_plot/ENCFF845YSF-ENCFF770RKQ-ENCFF049BBI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB902CFJ bradley-bernstein:DNA_Lib 7725 "ENCFF770RKQ,ENCFF049BBI,ENCFF845YSF" HiSeq 2500 2016-10-27T17:37:03.829268+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08Gz300369BgF5f15PFFFPf ENCSR857XRG https://www.encodeproject.org/experiments/ENCSR857XRG "histone,histone modification,broad histone mark" H3K36me3-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF890VTB https://www.encodeproject.org/files/ENCFF890VTB/@@download/ENCFF890VTB.bam ENCFF811MMA https://www.encodeproject.org/files/ENCFF811MMA/@@download/ENCFF811MMA.bam 62.2 M 0 60.3 M 0.970 SE 76 76 native 0.0 M 52.8 M 47.6 M 0.766 0.91 0.91 10.54 275 1.01 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/848932d9-1808-497d-b353-e166f41f9da0/@@download/cross_correlation_plot/ENCFF117LQC-ENCFF490WWF-ENCFF346YRH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB177PZY bradley-bernstein:DNA_Lib 7728 "ENCFF346YRH,ENCFF490WWF,ENCFF117LQC" HiSeq 2500 2016-12-14T18:41:14.656966+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18353803697yz601ypVJP0G ENCSR857XRG https://www.encodeproject.org/experiments/ENCSR857XRG "histone,histone modification,broad histone mark" H3K36me3-human adrenal gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF264OMS https://www.encodeproject.org/files/ENCFF264OMS/@@download/ENCFF264OMS.bam ENCFF101MQX https://www.encodeproject.org/files/ENCFF101MQX/@@download/ENCFF101MQX.bam 46.0 M 0 44.3 M 0.964 SE 76 76 native 0.0 M 38.9 M 27.3 M 0.593 0.70 0.68 2.92 235 1.01 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/000447b4-a0b9-4ab0-bf12-ddfd22af2101/@@download/cross_correlation_plot/ENCFF341OES-ENCFF586CCU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB029CKM bradley-bernstein:DNA_Lib 8143 "ENCFF341OES,ENCFF586CCU" HiSeq 2500 2016-12-14T18:47:50.427135+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1835Pj03693Z7441b50220z ENCSR406PCK https://www.encodeproject.org/experiments/ENCSR406PCK "histone,histone modification,broad histone mark" H3K4me1-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF351SDV https://www.encodeproject.org/files/ENCFF351SDV/@@download/ENCFF351SDV.bam ENCFF625EBX https://www.encodeproject.org/files/ENCFF625EBX/@@download/ENCFF625EBX.bam 63.1 M 0 61.4 M 0.972 SE 76 76 native 0.0 M 54.5 M 52.0 M 0.824 0.96 0.96 24.36 100 1.01 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/f53165dd-c9e2-4385-b003-18f633ad1b87/@@download/cross_correlation_plot/ENCFF756CPJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB210SLF bradley-bernstein:DNA_Lib 7796 ENCFF756CPJ HiSeq 2500 2016-08-09T16:53:58.149729+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV4680369PJFfV2Q3BkKP7 ENCSR406PCK https://www.encodeproject.org/experiments/ENCSR406PCK "histone,histone modification,broad histone mark" H3K4me1-human adrenal gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF825APG https://www.encodeproject.org/files/ENCFF825APG/@@download/ENCFF825APG.bam ENCFF429PJA https://www.encodeproject.org/files/ENCFF429PJA/@@download/ENCFF429PJA.bam 40.8 M 0 39.8 M 0.975 SE 76 76 native 0.0 M 35.1 M 33.6 M 0.823 0.96 0.96 25.34 245 1.01 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/91e84edd-33c1-44e5-8e43-b58fe8b0ab98/@@download/cross_correlation_plot/ENCFF893JPA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB852PMQ bradley-bernstein:DNA_Lib 7616 ENCFF893JPA HiSeq 2500 2016-08-09T16:52:53.075129+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV49j036900FyV0Q3P2pJG ENCSR455JUO https://www.encodeproject.org/experiments/ENCSR455JUO "histone,histone modification,broad histone mark" H3K4me1-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF118UDI https://www.encodeproject.org/files/ENCFF118UDI/@@download/ENCFF118UDI.bam ENCFF701MEY https://www.encodeproject.org/files/ENCFF701MEY/@@download/ENCFF701MEY.bam 61.3 M 0 59.9 M 0.977 SE 76 76 native 0.0 M 52.9 M 50.8 M 0.827 0.96 0.96 27.28 230 1.01 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/6527da6a-6c9b-48b2-b424-baf854ca7411/@@download/cross_correlation_plot/ENCFF404FGY-ENCFF517NJM-ENCFF770FZG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB618KZC bradley-bernstein:DNA_Lib 7723 "ENCFF404FGY,ENCFF770FZG,ENCFF517NJM" HiSeq 2500 2017-01-27T16:50:54.483916+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25K0P00369G6559FZ0gBFZ5 ENCSR605QAV https://www.encodeproject.org/experiments/ENCSR605QAV "histone,histone modification,narrow histone mark" H3K4me3-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF436EGK https://www.encodeproject.org/files/ENCFF436EGK/@@download/ENCFF436EGK.bam ENCFF792KTF https://www.encodeproject.org/files/ENCFF792KTF/@@download/ENCFF792KTF.bam 41.0 M 0 39.4 M 0.961 SE 76 76 native 0.0 M 35.1 M 33.0 M 0.805 0.94 0.95 19.34 220 1.24 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8b2bf43-d3eb-4e69-9196-b8a3da17ac28/@@download/cross_correlation_plot/ENCFF215WKF-ENCFF983DNV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB929PRJ bradley-bernstein:DNA_Lib 8203 "ENCFF983DNV,ENCFF215WKF" HiSeq 2500 2016-10-31T13:23:37.281183+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8gGj0369P876f29P7QZzq ENCSR620TXL https://www.encodeproject.org/experiments/ENCSR620TXL "histone,histone modification,narrow histone mark" H3K4me3-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF519TFC https://www.encodeproject.org/files/ENCFF519TFC/@@download/ENCFF519TFC.bam ENCFF560YBF https://www.encodeproject.org/files/ENCFF560YBF/@@download/ENCFF560YBF.bam 41.5 M 0 40.7 M 0.979 SE 74 74 native 0.0 M 35.4 M 34.2 M 0.823 0.97 0.97 31.43 200 1.02 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/603e2b56-4b53-45d8-9ec1-03830f2a5a3f/@@download/cross_correlation_plot/ENCFF170QOZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB521JWR bradley-bernstein:DNA_Lib 7333 ENCFF170QOZ HiSeq 2500 2016-08-09T16:52:35.668081+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV43Q0369F2Bb9zQ2bqgx8 ENCSR926NMC https://www.encodeproject.org/experiments/ENCSR926NMC "histone,histone modification,narrow histone mark" H3K4me3-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF658QET https://www.encodeproject.org/files/ENCFF658QET/@@download/ENCFF658QET.bam ENCFF792RXG https://www.encodeproject.org/files/ENCFF792RXG/@@download/ENCFF792RXG.bam 37.1 M 0 35.9 M 0.970 SE 76 None 0.0 M 31.0 M 30.3 M 0.818 0.98 0.98 57.10 225 1.01 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/897fb4a1-c1dd-482d-a003-d63e70df4d32/@@download/cross_correlation_plot/ENCFF859LHZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB193KMB bradley-bernstein:DNA_Lib 7553 ENCFF859LHZ HiSeq 2500 2016-04-23T06:21:02.764480+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF57Q036960XvgZ5zBvGZV ENCSR053PIY https://www.encodeproject.org/experiments/ENCSR053PIY "histone,histone modification,broad histone mark" H3K9me3-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF282WEX https://www.encodeproject.org/files/ENCFF282WEX/@@download/ENCFF282WEX.bam ENCFF613IDB https://www.encodeproject.org/files/ENCFF613IDB/@@download/ENCFF613IDB.bam 41.0 M 0 39.5 M 0.962 SE 76 76 native 0.0 M 34.4 M 25.5 M 0.622 0.75 0.74 3.55 95 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/64ac40b8-80d9-4ac9-ae01-3199500ab9bc/@@download/cross_correlation_plot/ENCFF446BXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KSD bradley-bernstein:DNA_Lib 7755 ENCFF446BXG HiSeq 2500 2016-08-09T16:52:34.223246+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV4GQ03696BF6v1Q3BGJVB ENCSR053PIY https://www.encodeproject.org/experiments/ENCSR053PIY "histone,histone modification,broad histone mark" H3K9me3-human adrenal gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF233VGO https://www.encodeproject.org/files/ENCFF233VGO/@@download/ENCFF233VGO.bam ENCFF922FBZ https://www.encodeproject.org/files/ENCFF922FBZ/@@download/ENCFF922FBZ.bam 36.9 M 0 35.9 M 0.973 SE 76 76 native 0.0 M 31.4 M 24.6 M 0.668 0.79 0.78 4.27 205 1.02 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c7f5368-27d6-47a9-9080-7e0de7dd1c25/@@download/cross_correlation_plot/ENCFF707UFJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB092WWL bradley-bernstein:DNA_Lib 7726 ENCFF707UFJ HiSeq 2500 2016-08-09T16:52:19.838592+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV4P0036999gGf10330ffj ENCSR408ZEW https://www.encodeproject.org/experiments/ENCSR408ZEW "histone,histone modification,broad histone mark" H3K9me3-human adrenal gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF753FPS https://www.encodeproject.org/files/ENCFF753FPS/@@download/ENCFF753FPS.bam ENCFF897HJA https://www.encodeproject.org/files/ENCFF897HJA/@@download/ENCFF897HJA.bam 69.6 M 0 66.8 M 0.959 SE 76 76 native 0.0 M 56.8 M 51.4 M 0.738 0.91 0.91 10.97 270 1.01 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d262f31-2eab-407b-b25e-337958a42673/@@download/cross_correlation_plot/ENCFF113AOP-ENCFF170XFX-ENCFF764PML_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB840PQG bradley-bernstein:DNA_Lib 7729 "ENCFF113AOP,ENCFF170XFX,ENCFF764PML" HiSeq 2500 2016-10-26T20:58:42.604210+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08Gz680369FFbbzvx9jx15V ENCSR007WYC https://www.encodeproject.org/experiments/ENCSR007WYC control Control-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF299AOC https://www.encodeproject.org/files/ENCFF299AOC/@@download/ENCFF299AOC.bam ENCFF912JWP https://www.encodeproject.org/files/ENCFF912JWP/@@download/ENCFF912JWP.bam 63.5 M 0 61.2 M 0.964 SE 76 76 native 0.0 M 54.4 M 53.3 M 0.840 0.98 0.98 60.07 505 1.00 5.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b778c0f-1e94-478f-8d76-00eccf613b06/@@download/cross_correlation_plot/ENCFF127SEC-ENCFF379SQR-ENCFF334CJI-ENCFF547GCK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB583DWI,ENCLB390DIM" "bradley-bernstein:DNA_Lib 7944,bradley-bernstein:DNA_Lib 8120" "ENCFF127SEC,ENCFF334CJI,ENCFF547GCK,ENCFF379SQR" HiSeq 2500 2016-10-27T22:03:46.304768+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Qf80369G9kV1j1K1fv6K ENCSR494YJW https://www.encodeproject.org/experiments/ENCSR494YJW control Control-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF893ZJC https://www.encodeproject.org/files/ENCFF893ZJC/@@download/ENCFF893ZJC.bam ENCFF886RGO https://www.encodeproject.org/files/ENCFF886RGO/@@download/ENCFF886RGO.bam 72.7 M 0 70.8 M 0.974 SE 76 76 native 0.0 M 62.8 M 60.9 M 0.838 0.97 0.97 36.42 1150 1.00 0.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2936627-59be-4a15-8dc8-1aafb850f563/@@download/cross_correlation_plot/ENCFF492ETH-ENCFF597LCE-ENCFF944VDZ-ENCFF775TGL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB193POV bradley-bernstein:DNA_Lib 8288 "ENCFF597LCE,ENCFF492ETH,ENCFF775TGL,ENCFF944VDZ" HiSeq 2500 2017-04-21T16:05:49.129717+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3vVpZ00369B30JzPPqz9Qk5 ENCSR069UMW https://www.encodeproject.org/experiments/ENCSR069UMW "histone,histone modification,narrow histone mark" H3K27ac-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF128VGR https://www.encodeproject.org/files/ENCFF128VGR/@@download/ENCFF128VGR.bam ENCFF334FYH https://www.encodeproject.org/files/ENCFF334FYH/@@download/ENCFF334FYH.bam 31.1 M 0 29.8 M 0.958 SE 76 76 native 0.0 M 27.8 M 24.6 M 0.793 0.89 0.89 8.78 230 1.19 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/618c5967-ebac-43af-9dcb-e9f1568badac/@@download/cross_correlation_plot/ENCFF757QLQ-ENCFF121LEM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB140VAC bradley-bernstein:DNA_Lib 8062 "ENCFF757QLQ,ENCFF121LEM" HiSeq 2500 2016-10-31T13:26:33.988450+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F831Q0369JKJFVg9KK4J1V ENCSR982QIF https://www.encodeproject.org/experiments/ENCSR982QIF "histone,histone modification,narrow histone mark" H3K27ac-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF823SXL https://www.encodeproject.org/files/ENCFF823SXL/@@download/ENCFF823SXL.bam ENCFF204MGF https://www.encodeproject.org/files/ENCFF204MGF/@@download/ENCFF204MGF.bam 50.2 M 0 48.4 M 0.962 SE 76 76 native 0.0 M 44.9 M 42.2 M 0.840 0.94 0.94 17.96 215 1.18 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6599b4b-599d-49bb-aa6f-62909906a4d8/@@download/cross_correlation_plot/ENCFF342QSI-ENCFF599EFX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB626HJU bradley-bernstein:DNA_Lib 8277 "ENCFF342QSI,ENCFF599EFX" HiSeq 2500 2016-11-16T18:44:57.009909+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bpvv80369Fk8X88vZ8B59J ENCSR103QHX https://www.encodeproject.org/experiments/ENCSR103QHX "histone,histone modification,broad histone mark" H3K27me3-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF411QLO https://www.encodeproject.org/files/ENCFF411QLO/@@download/ENCFF411QLO.bam ENCFF332XMQ https://www.encodeproject.org/files/ENCFF332XMQ/@@download/ENCFF332XMQ.bam 60.3 M 0 58.1 M 0.963 SE 76 76 native 0.0 M 51.4 M 48.7 M 0.807 0.95 0.95 19.26 220 1.00 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ae35c7c-aaad-49f7-934c-c0187fb16c92/@@download/cross_correlation_plot/ENCFF782TPX-ENCFF491PHM-ENCFF244YXH-ENCFF696JUO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB067AYN bradley-bernstein:DNA_Lib 8278 "ENCFF782TPX,ENCFF696JUO,ENCFF491PHM,ENCFF244YXH" HiSeq 2500 2017-01-26T20:53:48.472845+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4jy8V003693Z19gJPfXz9PV ENCSR589GII https://www.encodeproject.org/experiments/ENCSR589GII "histone,histone modification,broad histone mark" H3K27me3-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF741NYO https://www.encodeproject.org/files/ENCFF741NYO/@@download/ENCFF741NYO.bam ENCFF478YJK https://www.encodeproject.org/files/ENCFF478YJK/@@download/ENCFF478YJK.bam 66.4 M 0 63.9 M 0.961 SE 76 76 native 0.0 M 56.4 M 40.5 M 0.610 0.72 0.70 3.10 205 1.01 2.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1075e47-7023-4917-83f7-a1b887ed462d/@@download/cross_correlation_plot/ENCFF888QUQ-ENCFF830PWL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB203NXQ bradley-bernstein:DNA_Lib 8200 "ENCFF888QUQ,ENCFF830PWL" HiSeq 2500 2016-10-31T13:27:15.317497+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F83B003694fxGgzJ8XqvKj ENCSR248PES https://www.encodeproject.org/experiments/ENCSR248PES "histone,histone modification,broad histone mark" H3K36me3-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF415TVC https://www.encodeproject.org/files/ENCFF415TVC/@@download/ENCFF415TVC.bam ENCFF428RIG https://www.encodeproject.org/files/ENCFF428RIG/@@download/ENCFF428RIG.bam 78.8 M 0 75.4 M 0.957 SE 76 76 native 0.0 M 67.4 M 64.4 M 0.817 0.96 0.96 23.01 280 1.01 0.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/36dcb201-05cf-41f4-9681-3cd4e9ec594e/@@download/cross_correlation_plot/ENCFF742GLB-ENCFF271WRY-ENCFF930BWZ-ENCFF251VII_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB084AUH bradley-bernstein:DNA_Lib 8075 "ENCFF271WRY,ENCFF742GLB,ENCFF930BWZ,ENCFF251VII" HiSeq 2500 2016-10-31T13:29:59.311376+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F83Yj0369JKJFVg9KK4J22 ENCSR736PKV https://www.encodeproject.org/experiments/ENCSR736PKV "histone,histone modification,broad histone mark" H3K36me3-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF641SNT https://www.encodeproject.org/files/ENCFF641SNT/@@download/ENCFF641SNT.bam ENCFF835LMY https://www.encodeproject.org/files/ENCFF835LMY/@@download/ENCFF835LMY.bam 48.5 M 0 47.2 M 0.974 SE 76 76 native 0.0 M 42.1 M 40.5 M 0.835 0.96 0.96 26.78 190 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b8883d2-3e9e-4504-90b7-af256dafb248/@@download/cross_correlation_plot/ENCFF841JIG-ENCFF750DYV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB900MRP bradley-bernstein:DNA_Lib 8279 "ENCFF750DYV,ENCFF841JIG" HiSeq 2500 2016-11-05T00:22:05.189986+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4jy8J0036974gjVJQ5zKZ7Q ENCSR202XTW https://www.encodeproject.org/experiments/ENCSR202XTW "histone,histone modification,broad histone mark" H3K4me1-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF061NMR https://www.encodeproject.org/files/ENCFF061NMR/@@download/ENCFF061NMR.bam ENCFF982HUN https://www.encodeproject.org/files/ENCFF982HUN/@@download/ENCFF982HUN.bam 133.8 M 0 128.8 M 0.963 SE 76 76 native 0.0 M 115.1 M 103.0 M 0.770 0.90 0.90 9.39 210 1.00 -0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8641288-528f-4e6b-a4d5-597eb00cd429/@@download/cross_correlation_plot/ENCFF512JRJ-ENCFF515RHS-ENCFF792ZDL-ENCFF369BBJ-ENCFF234XDM-ENCFF882SYI-ENCFF753GIE-ENCFF080EXQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB351XJL bradley-bernstein:DNA_Lib 8275 "ENCFF234XDM,ENCFF515RHS,ENCFF792ZDL,ENCFF882SYI,ENCFF512JRJ,ENCFF080EXQ,ENCFF753GIE,ENCFF369BBJ" HiSeq 2500 2017-01-27T05:45:43.962848+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4jy89003690072JJQ92gpKJ ENCSR707AEW https://www.encodeproject.org/experiments/ENCSR707AEW "histone,histone modification,broad histone mark" H3K4me1-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF037OMD https://www.encodeproject.org/files/ENCFF037OMD/@@download/ENCFF037OMD.bam ENCFF631TKX https://www.encodeproject.org/files/ENCFF631TKX/@@download/ENCFF631TKX.bam 95.0 M 0 92.4 M 0.973 SE 76 76 native 0.0 M 84.2 M 78.3 M 0.824 0.93 0.93 14.43 180 1.01 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/13917e24-8c00-469f-a8cd-e820cffd2d6c/@@download/cross_correlation_plot/ENCFF847ZAG-ENCFF719TYQ-ENCFF435KZN-ENCFF984YGM-ENCFF172ZRF-ENCFF380MWW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB035VIQ bradley-bernstein:DNA_Lib 8273 "ENCFF847ZAG,ENCFF435KZN,ENCFF380MWW,ENCFF719TYQ,ENCFF172ZRF,ENCFF984YGM" HiSeq 2500 2017-01-27T05:51:17.027780+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F255jy00369FB2f75bZ9QzQ1 ENCSR122LOZ https://www.encodeproject.org/experiments/ENCSR122LOZ "histone,histone modification,narrow histone mark" H3K4me3-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF246DQY https://www.encodeproject.org/files/ENCFF246DQY/@@download/ENCFF246DQY.bam ENCFF828VBV https://www.encodeproject.org/files/ENCFF828VBV/@@download/ENCFF828VBV.bam 31.4 M 0 30.3 M 0.964 SE 76 76 native 0.0 M 26.9 M 25.9 M 0.825 0.96 0.97 29.25 210 1.12 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/4736268c-ce59-4ce4-b6bd-128ae2062601/@@download/cross_correlation_plot/ENCFF103SUJ-ENCFF880LWV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB938MZV bradley-bernstein:DNA_Lib 8199 "ENCFF880LWV,ENCFF103SUJ" HiSeq 2500 2016-10-31T13:27:28.562188+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F835Q0369JKJFVg9KK4J1k ENCSR645FBM https://www.encodeproject.org/experiments/ENCSR645FBM "histone,histone modification,narrow histone mark" H3K4me3-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF321TTK https://www.encodeproject.org/files/ENCFF321TTK/@@download/ENCFF321TTK.bam ENCFF449OVQ https://www.encodeproject.org/files/ENCFF449OVQ/@@download/ENCFF449OVQ.bam 69.7 M 0 67.0 M 0.962 SE 76 76 native 0.0 M 61.6 M 53.2 M 0.764 0.87 0.88 9.20 215 1.42 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c102035-3f3a-43b2-847d-6c03fbb3ae47/@@download/cross_correlation_plot/ENCFF020ONH-ENCFF478FQV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB751UIO bradley-bernstein:DNA_Lib 8276 "ENCFF478FQV,ENCFF020ONH" HiSeq 2500 2016-11-16T18:44:58.687476+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bpx1j0369BpjBzzvJ0kbfv ENCSR441YQA https://www.encodeproject.org/experiments/ENCSR441YQA "histone,histone modification,broad histone mark" H3K9me3-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF661UEW https://www.encodeproject.org/files/ENCFF661UEW/@@download/ENCFF661UEW.bam ENCFF059KBW https://www.encodeproject.org/files/ENCFF059KBW/@@download/ENCFF059KBW.bam 47.6 M 0 45.7 M 0.959 SE 76 76 native 0.0 M 37.8 M 36.3 M 0.762 0.96 0.96 26.42 100 1.01 0.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/04d45678-8983-4858-90ff-de740e1c54a5/@@download/cross_correlation_plot/ENCFF969SNJ-ENCFF339UXR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB591LCO bradley-bernstein:DNA_Lib 8280 "ENCFF969SNJ,ENCFF339UXR" HiSeq 2500 2016-11-05T00:23:26.655661+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4jy840036996pkgJP8PjQK2 ENCSR723IKM https://www.encodeproject.org/experiments/ENCSR723IKM "histone,histone modification,broad histone mark" H3K9me3-human ascending aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF285SFG https://www.encodeproject.org/files/ENCFF285SFG/@@download/ENCFF285SFG.bam ENCFF567RXM https://www.encodeproject.org/files/ENCFF567RXM/@@download/ENCFF567RXM.bam 58.8 M 0 55.9 M 0.950 SE 76 76 native 0.0 M 45.3 M 43.0 M 0.732 0.95 0.96 23.76 100 1.01 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c322d73-bc20-4735-a013-b8c95d013ed2/@@download/cross_correlation_plot/ENCFF422LCV-ENCFF118JBS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB171AZH bradley-bernstein:DNA_Lib 8274 "ENCFF422LCV,ENCFF118JBS" HiSeq 2500 2016-10-31T13:27:24.783890+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F83j00369JgG4ppJK6q84J ENCSR000AOP https://www.encodeproject.org/experiments/ENCSR000AOP control Control-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF216TIF https://www.encodeproject.org/files/ENCFF216TIF/@@download/ENCFF216TIF.bam ENCFF368JCF https://www.encodeproject.org/files/ENCFF368JCF/@@download/ENCFF368JCF.bam 126.1 M 0 113.1 M 0.897 SE 36 36 native 0.0 M 85.0 M 72.8 M 0.577 0.87 0.87 7.61 170 1.01 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/0770a7ce-cd87-43f6-b237-a0ee8c944828/@@download/cross_correlation_plot/ENCFF563PNW-ENCFF631QCD-ENCFF000CFY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB678YNQ,ENCLB695ACR" bradley-bernstein:DNA_Lib 805 "ENCFF563PNW,ENCFF000CFY,ENCFF631QCD" "Illumina Genome Analyzer IIx,HiSeq 2000" 2017-04-06T20:57:26.555024+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Y6Qf80369K8XGkJp28XKkK ENCSR000AOP https://www.encodeproject.org/experiments/ENCSR000AOP control Control-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF639TYV https://www.encodeproject.org/files/ENCFF639TYV/@@download/ENCFF639TYV.bam ENCFF391KPN https://www.encodeproject.org/files/ENCFF391KPN/@@download/ENCFF391KPN.bam 60.3 M 0 53.7 M 0.890 SE 36 36 native 0.0 M 39.7 M 37.6 M 0.624 0.95 0.95 21.75 180 1.01 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f7215b9-9f06-4b18-b750-5b445479dca2/@@download/cross_correlation_plot/ENCFF765DJW-ENCFF615VUA-ENCFF000CFR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB338QBD,ENCLB695ACS" bradley-bernstein:DNA_Lib 806 "ENCFF000CFR,ENCFF765DJW,ENCFF615VUA" "HiSeq 2000,Illumina Genome Analyzer IIe" 2017-04-06T18:54:19.849086+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Y6Qq003697bJBx4xYgyjV8 ENCSR000AOO https://www.encodeproject.org/experiments/ENCSR000AOO "transcription factor,RNA binding protein" CTCF-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF414QUV https://www.encodeproject.org/files/ENCFF414QUV/@@download/ENCFF414QUV.bam ENCFF288HLV https://www.encodeproject.org/files/ENCFF288HLV/@@download/ENCFF288HLV.bam 15.5 M 0 12.3 M 0.790 SE 36 36 native 0.0 M 9.2 M 6.8 M 0.437 0.74 0.73 3.64 165 1.76 3.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/32421d5c-6f2d-4f80-b372-3ecd5e0964d0/@@download/cross_correlation_plot/ENCFF000CFV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFV ENCFF000CFV Illumina Genome Analyzer IIe 2016-12-10T20:38:16.289910+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162zq00369F4yf5544b18fJ ENCSR000AOO https://www.encodeproject.org/experiments/ENCSR000AOO "transcription factor,RNA binding protein" CTCF-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF616NWB https://www.encodeproject.org/files/ENCFF616NWB/@@download/ENCFF616NWB.bam ENCFF086PVK https://www.encodeproject.org/files/ENCFF086PVK/@@download/ENCFF086PVK.bam 27.1 M 0 16.0 M 0.590 SE 36 36 native 0.0 M 11.5 M 9.6 M 0.355 0.88 0.88 8.17 155 1.77 3.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/69c66293-2f89-4c3c-9b39-d07cdad65c56/@@download/cross_correlation_plot/ENCFF000CFW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFW ENCFF000CFW Illumina Genome Analyzer IIx 2016-12-10T20:44:38.152541+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163008036993F1b953B4Pzb ENCSR000ARR https://www.encodeproject.org/experiments/ENCSR000ARR "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF831JFC https://www.encodeproject.org/files/ENCFF831JFC/@@download/ENCFF831JFC.bam ENCFF862NQR https://www.encodeproject.org/files/ENCFF862NQR/@@download/ENCFF862NQR.bam 44.9 M 0 42.4 M 0.943 SE 36 36 native 0.0 M 32.3 M 28.7 M 0.640 0.89 0.89 9.41 140 1.04 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/b702c250-6f4f-41ea-ae3b-b69776ecbd54/@@download/cross_correlation_plot/ENCFF000CGE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFD bradley-bernstein:DNA_Lib 676 ENCFF000CGE Illumina Genome Analyzer 2016-12-11T04:57:44.141934+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165zgQ03698j1Pf95Q52xz6 ENCSR000ARR https://www.encodeproject.org/experiments/ENCSR000ARR "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF329CYB https://www.encodeproject.org/files/ENCFF329CYB/@@download/ENCFF329CYB.bam ENCFF254DFD https://www.encodeproject.org/files/ENCFF254DFD/@@download/ENCFF254DFD.bam 9.4 M 0 9.0 M 0.957 SE 36 36 native 0.0 M 7.1 M 6.7 M 0.716 0.95 0.95 19.91 185 1.14 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/d064164b-b27c-4d73-bb4d-30ebb3c53d73/@@download/cross_correlation_plot/ENCFF000CGB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFC bradley-bernstein:DNA_Lib 677 ENCFF000CGB Illumina Genome Analyzer 2016-12-11T04:35:56.667765+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165zv80369KQ3Yk1yz1kgx9 ENCSR000AQP https://www.encodeproject.org/experiments/ENCSR000AQP "histone,histone modification,narrow histone mark" H2AFZ-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF139ANH https://www.encodeproject.org/files/ENCFF139ANH/@@download/ENCFF139ANH.bam ENCFF613FTC https://www.encodeproject.org/files/ENCFF613FTC/@@download/ENCFF613FTC.bam 37.0 M 0 32.1 M 0.870 SE 36 36 native 0.0 M 25.3 M 24.8 M 0.672 0.98 0.98 51.90 140 1.08 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ed40c3e-7591-41c7-91b5-e828d8cf118f/@@download/cross_correlation_plot/ENCFF000CGK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATG ENCFF000CGK Illumina Genome Analyzer IIx 2016-11-07T03:10:15.880443+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKFZQ0369KGxqqJv3G8FyG ENCSR000AQP https://www.encodeproject.org/experiments/ENCSR000AQP "histone,histone modification,narrow histone mark" H2AFZ-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF033VAU https://www.encodeproject.org/files/ENCFF033VAU/@@download/ENCFF033VAU.bam ENCFF274LBZ https://www.encodeproject.org/files/ENCFF274LBZ/@@download/ENCFF274LBZ.bam 13.6 M 0 13.2 M 0.974 SE 36 36 native 0.0 M 10.3 M 9.5 M 0.699 0.93 0.93 14.08 190 1.17 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/b0fd3a9f-0116-4f94-b811-eb933efe378f/@@download/cross_correlation_plot/ENCFF000CGH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATF ENCFF000CGH Illumina Genome Analyzer IIx 2016-11-07T03:09:05.294274+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKFq80369349Kqpx8PZbXV ENCSR000AOQ https://www.encodeproject.org/experiments/ENCSR000AOQ "histone,histone modification,narrow histone mark" H3K27ac-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF084MDC https://www.encodeproject.org/files/ENCFF084MDC/@@download/ENCFF084MDC.bam ENCFF383VYP https://www.encodeproject.org/files/ENCFF383VYP/@@download/ENCFF383VYP.bam 16.6 M 0 13.1 M 0.787 SE 36 36 native 0.0 M 10.6 M 9.6 M 0.580 0.91 0.91 11.77 180 1.54 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/82910771-a95a-4c09-9d23-294ae636b258/@@download/cross_correlation_plot/ENCFF000CHK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJH ENCFF000CHK Illumina Genome Analyzer IIe 2016-08-09T15:58:45.820526+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY9Gj0369FGGBGjG2qk11B ENCSR000AOQ https://www.encodeproject.org/experiments/ENCSR000AOQ "histone,histone modification,narrow histone mark" H3K27ac-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF496OLR https://www.encodeproject.org/files/ENCFF496OLR/@@download/ENCFF496OLR.bam ENCFF135NBG https://www.encodeproject.org/files/ENCFF135NBG/@@download/ENCFF135NBG.bam 16.2 M 0 13.6 M 0.840 SE 36 36 native 0.0 M 11.1 M 10.3 M 0.634 0.94 0.94 17.96 175 1.71 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad226d12-0430-4928-bb7c-6dce59346097/@@download/cross_correlation_plot/ENCFF000CHH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJG ENCFF000CHH Illumina Genome Analyzer IIx 2016-08-09T15:58:36.574988+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY9P00369FGGBGjG2qk11Y ENCSR000AOR https://www.encodeproject.org/experiments/ENCSR000AOR "histone,histone modification,broad histone mark" H3K27me3-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF442ZRV https://www.encodeproject.org/files/ENCFF442ZRV/@@download/ENCFF442ZRV.bam ENCFF699GSJ https://www.encodeproject.org/files/ENCFF699GSJ/@@download/ENCFF699GSJ.bam 12.1 M 0 10.1 M 0.839 SE 36 36 native 0.0 M 7.7 M 7.1 M 0.589 0.93 0.93 13.53 145 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/fba400f0-9d2d-4e79-a69f-5bb1c978f31f/@@download/cross_correlation_plot/ENCFF000CHN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGA ENCFF000CHN Illumina Genome Analyzer IIe 2016-11-07T03:15:23.918767+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJjzj03698kJz2gxb7gpBz ENCSR000AOR https://www.encodeproject.org/experiments/ENCSR000AOR "histone,histone modification,broad histone mark" H3K27me3-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF757AUJ https://www.encodeproject.org/files/ENCFF757AUJ/@@download/ENCFF757AUJ.bam ENCFF855YCW https://www.encodeproject.org/files/ENCFF855YCW/@@download/ENCFF855YCW.bam 28.4 M 0 22.5 M 0.793 SE 36 36 native 0.0 M 16.6 M 15.0 M 0.530 0.92 0.92 13.21 140 1.04 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/2b948ba9-0130-4f61-9780-f828285699ef/@@download/cross_correlation_plot/ENCFF000CHR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFZ ENCFF000CHR Illumina Genome Analyzer IIx 2016-11-07T03:16:15.499724+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJk7003695kGp5Vkb1Yg4y ENCSR000AOS https://www.encodeproject.org/experiments/ENCSR000AOS "histone,histone modification,broad histone mark" H3K36me3-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF264MJR https://www.encodeproject.org/files/ENCFF264MJR/@@download/ENCFF264MJR.bam ENCFF464CRS https://www.encodeproject.org/files/ENCFF464CRS/@@download/ENCFF464CRS.bam 20.9 M 0 16.4 M 0.783 SE 36 36 native 0.0 M 12.1 M 11.7 M 0.561 0.97 0.97 37.57 150 1.02 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc314ebd-0b18-4c1d-b31b-96ece2264e3c/@@download/cross_correlation_plot/ENCFF000CHT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEN ENCFF000CHT Illumina Genome Analyzer IIe 2016-11-07T03:09:28.210325+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK9q00369B8pxyPG3K31Q6 ENCSR000AOS https://www.encodeproject.org/experiments/ENCSR000AOS "histone,histone modification,broad histone mark" H3K36me3-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF655GPX https://www.encodeproject.org/files/ENCFF655GPX/@@download/ENCFF655GPX.bam ENCFF423ZWU https://www.encodeproject.org/files/ENCFF423ZWU/@@download/ENCFF423ZWU.bam 26.2 M 0 17.0 M 0.650 SE 36 36 native 0.0 M 12.3 M 11.2 M 0.427 0.93 0.93 14.44 145 1.05 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/45b714ed-bb62-4ea9-b08a-dea1c332f668/@@download/cross_correlation_plot/ENCFF000CHU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEO ENCFF000CHU Illumina Genome Analyzer IIx 2016-11-07T03:10:07.186032+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKB100369P0J6bFv35k9yp ENCSR000AOT https://www.encodeproject.org/experiments/ENCSR000AOT "histone,histone modification,broad histone mark" H3K4me1-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF676EGJ https://www.encodeproject.org/files/ENCFF676EGJ/@@download/ENCFF676EGJ.bam ENCFF562UFG https://www.encodeproject.org/files/ENCFF562UFG/@@download/ENCFF562UFG.bam 21.2 M 0 15.1 M 0.712 SE 36 36 native 0.0 M 11.6 M 11.0 M 0.521 0.95 0.95 21.89 190 1.12 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/48fe3678-870e-43e1-9865-2838e8b6e67f/@@download/cross_correlation_plot/ENCFF000CIA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABX ENCFF000CIA Illumina Genome Analyzer IIe 2016-11-07T03:09:21.765656+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKB7j0369P0J6bFv35k9z3 ENCSR000AOT https://www.encodeproject.org/experiments/ENCSR000AOT "histone,histone modification,broad histone mark" H3K4me1-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF027LVV https://www.encodeproject.org/files/ENCFF027LVV/@@download/ENCFF027LVV.bam ENCFF095OSM https://www.encodeproject.org/files/ENCFF095OSM/@@download/ENCFF095OSM.bam 14.5 M 0 13.3 M 0.920 SE 36 36 native 0.0 M 10.5 M 10.0 M 0.689 0.95 0.95 20.84 175 1.15 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e687b30-2122-4c0a-aac9-4e1973f03fd3/@@download/cross_correlation_plot/ENCFF000CHZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABY ENCFF000CHZ Illumina Genome Analyzer IIx 2016-11-07T03:09:02.461960+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKBQ00369KGxqqJv3G8FxF ENCSR000ARS https://www.encodeproject.org/experiments/ENCSR000ARS "histone,histone modification,narrow histone mark" H3K4me2-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF871OQF https://www.encodeproject.org/files/ENCFF871OQF/@@download/ENCFF871OQF.bam ENCFF172TMJ https://www.encodeproject.org/files/ENCFF172TMJ/@@download/ENCFF172TMJ.bam 32.3 M 0 30.3 M 0.939 SE 36 36 native 0.0 M 26.1 M 23.9 M 0.740 0.92 0.92 13.29 205 1.44 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/94d92a96-c163-4146-a079-45fb0300367a/@@download/cross_correlation_plot/ENCFF000CGP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKW bradley-bernstein:DNA_Lib 108 ENCFF000CGP HiSeq 2000 2016-11-07T03:12:27.699416+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK5780369B8pxyPG3K2Jk1 ENCSR000ARS https://www.encodeproject.org/experiments/ENCSR000ARS "histone,histone modification,narrow histone mark" H3K4me2-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF979JID https://www.encodeproject.org/files/ENCFF979JID/@@download/ENCFF979JID.bam ENCFF081GQR https://www.encodeproject.org/files/ENCFF081GQR/@@download/ENCFF081GQR.bam 43.5 M 0 41.9 M 0.963 SE 36 36 native 0.0 M 35.7 M 32.4 M 0.745 0.91 0.92 12.62 210 1.42 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc6883a1-5c2f-42c6-ab07-df912053393f/@@download/cross_correlation_plot/ENCFF000CGQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKX bradley-bernstein:DNA_Lib 110 ENCFF000CGQ Illumina Genome Analyzer IIx 2016-11-07T03:12:57.498510+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK5J80369BJ3j0F430pYzb ENCSR000AOU https://www.encodeproject.org/experiments/ENCSR000AOU "histone,histone modification,narrow histone mark" H3K4me3-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF025QGZ https://www.encodeproject.org/files/ENCFF025QGZ/@@download/ENCFF025QGZ.bam ENCFF823GPJ https://www.encodeproject.org/files/ENCFF823GPJ/@@download/ENCFF823GPJ.bam 13.1 M 0 10.9 M 0.835 SE 36 36 native 0.0 M 8.5 M 8.0 M 0.608 0.94 0.94 17.46 180 1.34 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7b8aba2-d87f-4ccb-bcde-8868c75edf7e/@@download/cross_correlation_plot/ENCFF000CID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJJ ENCFF000CID Illumina Genome Analyzer IIe 2016-08-20T00:46:21.180565+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZKBj036987fQVpQ89X4f0 ENCSR000AOU https://www.encodeproject.org/experiments/ENCSR000AOU "histone,histone modification,narrow histone mark" H3K4me3-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF962TLU https://www.encodeproject.org/files/ENCFF962TLU/@@download/ENCFF962TLU.bam ENCFF993PDL https://www.encodeproject.org/files/ENCFF993PDL/@@download/ENCFF993PDL.bam 27.4 M 0 22.0 M 0.802 SE 36 36 native 0.0 M 16.2 M 14.0 M 0.510 0.89 0.89 9.29 170 1.54 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce2ed1ba-d074-4d33-bf73-7910c420a593/@@download/cross_correlation_plot/ENCFF000CIG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJI ENCFF000CIG Illumina Genome Analyzer IIx 2016-08-20T00:46:44.583457+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZKJ803696k6PjpZ95Bxgx ENCSR000AQQ https://www.encodeproject.org/experiments/ENCSR000AQQ "histone,histone modification,broad histone mark" H3K79me2-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF339LKU https://www.encodeproject.org/files/ENCFF339LKU/@@download/ENCFF339LKU.bam ENCFF071QHD https://www.encodeproject.org/files/ENCFF071QHD/@@download/ENCFF071QHD.bam 37.9 M 0 34.9 M 0.922 SE 36 36 native 0.0 M 27.8 M 26.8 M 0.707 0.96 0.97 28.95 125 1.06 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ff62ba8-7e1e-41d1-9261-36341838e8bb/@@download/cross_correlation_plot/ENCFF000CIM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARR ENCFF000CIM Illumina Genome Analyzer 2016-11-07T03:19:14.312016+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJb7j03696QVKGb5b1821f ENCSR000AQQ https://www.encodeproject.org/experiments/ENCSR000AQQ "histone,histone modification,broad histone mark" H3K79me2-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF422FEV https://www.encodeproject.org/files/ENCFF422FEV/@@download/ENCFF422FEV.bam ENCFF384LSP https://www.encodeproject.org/files/ENCFF384LSP/@@download/ENCFF384LSP.bam 24.1 M 0 22.9 M 0.949 SE 36 36 native 0.0 M 18.0 M 15.7 M 0.651 0.88 0.88 8.21 190 1.08 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/1015228e-1193-4e5a-9c1c-17106014a160/@@download/cross_correlation_plot/ENCFF000CIL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARS ENCFF000CIL Illumina Genome Analyzer 2016-11-07T03:18:25.521606+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJbGj0369Fq9ppXVbB985P ENCSR000ART https://www.encodeproject.org/experiments/ENCSR000ART "histone,histone modification,narrow histone mark" H3K9ac-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF299KNV https://www.encodeproject.org/files/ENCFF299KNV/@@download/ENCFF299KNV.bam ENCFF179IYG https://www.encodeproject.org/files/ENCFF179IYG/@@download/ENCFF179IYG.bam 41.7 M 0 35.7 M 0.857 SE 36 36 native 0.0 M 29.7 M 27.3 M 0.654 0.92 0.93 14.36 210 1.32 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b785394-7ddd-435b-b7cc-731d9bd2f745/@@download/cross_correlation_plot/ENCFF000CGV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADX bradley-bernstein:DNA_Lib 109 ENCFF000CGV HiSeq 2000 2016-11-07T03:16:52.458272+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJkGQ036911ffQk1b9pX9y ENCSR000ART https://www.encodeproject.org/experiments/ENCSR000ART "histone,histone modification,narrow histone mark" H3K9ac-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF733XVC https://www.encodeproject.org/files/ENCFF733XVC/@@download/ENCFF733XVC.bam ENCFF859MDL https://www.encodeproject.org/files/ENCFF859MDL/@@download/ENCFF859MDL.bam 40.7 M 0 36.5 M 0.897 SE 36 36 native 0.0 M 29.8 M 26.4 M 0.649 0.89 0.90 10.80 215 1.46 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/c36251ea-214d-427a-b3b8-4afce01930ca/@@download/cross_correlation_plot/ENCFF000CGW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADW bradley-bernstein:DNA_Lib 111 ENCFF000CGW HiSeq 2000 2016-11-07T03:17:02.241699+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJkY80369F4g82fJbGXYK3 ENCSR000AQR https://www.encodeproject.org/experiments/ENCSR000AQR "histone,histone modification,broad histone mark" H3K9me3-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF151YPC https://www.encodeproject.org/files/ENCFF151YPC/@@download/ENCFF151YPC.bam ENCFF988GBD https://www.encodeproject.org/files/ENCFF988GBD/@@download/ENCFF988GBD.bam 40.7 M 0 39.3 M 0.965 SE 36 36 native 0.0 M 25.3 M 24.4 M 0.598 0.97 0.97 30.02 145 1.03 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7473b10-996e-43e3-9860-292d59953c51/@@download/cross_correlation_plot/ENCFF000CHE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUG ENCFF000CHE Illumina Genome Analyzer 2016-11-13T02:19:15.646782+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygk1j036980Yx5QZkJjQGP ENCSR000AQR https://www.encodeproject.org/experiments/ENCSR000AQR "histone,histone modification,broad histone mark" H3K9me3-human astrocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF499DLV https://www.encodeproject.org/files/ENCFF499DLV/@@download/ENCFF499DLV.bam ENCFF534VPM https://www.encodeproject.org/files/ENCFF534VPM/@@download/ENCFF534VPM.bam 16.7 M 0 16.2 M 0.972 SE 36 36 native 0.0 M 10.2 M 8.9 M 0.536 0.89 0.89 8.86 180 1.07 2.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/dfc7dd1a-5903-49c2-9215-496795fbfc9c/@@download/cross_correlation_plot/ENCFF000CHC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUF ENCFF000CHC Illumina Genome Analyzer 2016-11-13T00:45:58.447479+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygk680369Kzkv2p8jPV5xy ENCSR000ARU https://www.encodeproject.org/experiments/ENCSR000ARU "histone,histone modification,broad histone mark" H4K20me1-human astrocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF305IMY https://www.encodeproject.org/files/ENCFF305IMY/@@download/ENCFF305IMY.bam ENCFF750ZOV https://www.encodeproject.org/files/ENCFF750ZOV/@@download/ENCFF750ZOV.bam 77.0 M 0 59.4 M 0.771 SE 36 36 36 0.0 M 44.7 M 42.5 M 0.552 0.95 0.95 22.23 160 1.02 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/e637d581-097d-44e2-bea8-94355c1853c2/@@download/cross_correlation_plot/ENCFF000CIZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQD bradley-bernstein:DNA_Lib 106 ENCFF000CIZ Illumina Genome Analyzer 2017-01-05T01:04:18.626217+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pFJFj0369GJ1f8K4y9gPvg ENCSR000ARU https://www.encodeproject.org/experiments/ENCSR000ARU "histone,histone modification,broad histone mark" H4K20me1-human astrocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF165OXB https://www.encodeproject.org/files/ENCFF165OXB/@@download/ENCFF165OXB.bam ENCFF930IGY https://www.encodeproject.org/files/ENCFF930IGY/@@download/ENCFF930IGY.bam 38.7 M 0 35.1 M 0.908 SE 36 36 native 0.0 M 26.0 M 24.6 M 0.635 0.95 0.95 20.12 200 1.03 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/697c6759-bbd1-4c74-976b-6b2be7d51648/@@download/cross_correlation_plot/ENCFF000CIR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQC bradley-bernstein:DNA_Lib 112 ENCFF000CIR Illumina Genome Analyzer 2016-11-07T03:13:20.116517+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK058036911ffQk1b9pXGK ENCSR000AUW https://www.encodeproject.org/experiments/ENCSR000AUW control Control-human B cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF849QON https://www.encodeproject.org/files/ENCFF849QON/@@download/ENCFF849QON.bam ENCFF128SFZ https://www.encodeproject.org/files/ENCFF128SFZ/@@download/ENCFF128SFZ.bam 50.7 M 0 47.5 M 0.936 SE 36 36 None 0.0 M 34.9 M 33.0 M 0.650 0.95 0.95 19.57 245 1.02 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/e456c743-1df6-422c-a116-ae7ba75a6fe4/@@download/cross_correlation_plot/ENCFF000AMM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIU bradley-bernstein:DNA_Lib 2056 ENCFF000AMM HiSeq 2000 2016-07-13T02:52:36.810518+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z6800369J3PqFp0Q88Xvf ENCSR805DRF https://www.encodeproject.org/experiments/ENCSR805DRF control Control-human B cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF596XVY https://www.encodeproject.org/files/ENCFF596XVY/@@download/ENCFF596XVY.bam ENCFF344NKR https://www.encodeproject.org/files/ENCFF344NKR/@@download/ENCFF344NKR.bam 97.4 M 0 89.9 M 0.923 SE 36 36 native 0.0 M 66.5 M 43.7 M 0.448 0.69 0.67 2.94 170 1.02 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/889919f2-a2d5-4a26-a5fc-7be565cfa421/@@download/cross_correlation_plot/ENCFF000AMT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIV bradley-bernstein:DNA_Lib 960 ENCFF000AMT HiSeq 2000 2016-11-29T17:55:27.020359+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4jz00369PkfyKkbQQJyQK ENCSR000AUV https://www.encodeproject.org/experiments/ENCSR000AUV "transcription factor,RNA binding protein" CTCF-human B cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF112XEQ https://www.encodeproject.org/files/ENCFF112XEQ/@@download/ENCFF112XEQ.bam ENCFF853NEM https://www.encodeproject.org/files/ENCFF853NEM/@@download/ENCFF853NEM.bam 41.2 M 0 38.5 M 0.934 SE 36 36 native 0.0 M 30.7 M 19.3 M 0.469 0.65 0.65 2.83 230 2.27 3.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec627490-33ec-41a4-899a-b4c526e586a3/@@download/cross_correlation_plot/ENCFF000AMU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQP bradley-bernstein:DNA_Lib 2031 ENCFF000AMU HiSeq 2000 2016-12-11T04:32:48.200229+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Vqj0369K8k6p8qBf9qq7 ENCSR000AUV https://www.encodeproject.org/experiments/ENCSR000AUV "transcription factor,RNA binding protein" CTCF-human B cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF685DBQ https://www.encodeproject.org/files/ENCFF685DBQ/@@download/ENCFF685DBQ.bam ENCFF835VKE https://www.encodeproject.org/files/ENCFF835VKE/@@download/ENCFF835VKE.bam 28.4 M 0 24.5 M 0.863 SE 36 36 native 0.0 M 19.5 M 13.8 M 0.485 0.72 0.72 3.60 240 2.64 2.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/466a2705-662f-467a-861b-31a7ca4b5a3e/@@download/cross_correlation_plot/ENCFF000AMS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APF bradley-bernstein:DNA_Lib 2048 ENCFF000AMS HiSeq 2000 2016-12-11T04:24:21.522751+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165X1003697k5jKB6pJ7v04 ENCSR000AUZ https://www.encodeproject.org/experiments/ENCSR000AUZ "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human B cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF301OCC https://www.encodeproject.org/files/ENCFF301OCC/@@download/ENCFF301OCC.bam ENCFF705OOX https://www.encodeproject.org/files/ENCFF705OOX/@@download/ENCFF705OOX.bam 36.3 M 0 34.0 M 0.939 SE 36 36 native 0.0 M 25.5 M 17.0 M 0.469 0.69 0.68 3.08 235 1.03 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb3d8758-a0db-4b6e-b156-cac0dc09b94a/@@download/cross_correlation_plot/ENCFF000ANN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASX bradley-bernstein:DNA_Lib 2029 ENCFF000ANN HiSeq 2000 2016-12-11T04:27:16.747659+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Kk80369Bxb30J6x5bZKB ENCSR000AUZ https://www.encodeproject.org/experiments/ENCSR000AUZ "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human B cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF563GAI https://www.encodeproject.org/files/ENCFF563GAI/@@download/ENCFF563GAI.bam ENCFF726NQZ https://www.encodeproject.org/files/ENCFF726NQZ/@@download/ENCFF726NQZ.bam 32.0 M 0 25.6 M 0.800 SE 36 36 native 0.0 M 19.4 M 4.7 M 0.147 0.27 0.30 1.83 175 1.13 4.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/168c1013-6fb4-48fe-8e20-873f1836d191/@@download/cross_correlation_plot/ENCFF000ANM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASY bradley-bernstein:DNA_Lib 2035 ENCFF000ANM HiSeq 2000 2016-12-11T04:17:28.998396+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165KyQ0369GF0YB1zjPf6yK ENCSR000AUX https://www.encodeproject.org/experiments/ENCSR000AUX "histone,histone modification,narrow histone mark" H2AFZ-human B cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF725SFZ https://www.encodeproject.org/files/ENCFF725SFZ/@@download/ENCFF725SFZ.bam ENCFF991KKF https://www.encodeproject.org/files/ENCFF991KKF/@@download/ENCFF991KKF.bam 21.6 M 0 20.7 M 0.956 SE 36 36 native 0.0 M 16.3 M 15.5 M 0.716 0.95 0.96 22.48 220 1.22 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/fdcfbd78-0dea-41a2-af5e-23362fb69bb5/@@download/cross_correlation_plot/ENCFF000AND.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABO bradley-bernstein:DNA_Lib 2051 ENCFF000AND HiSeq 2000 2016-11-11T15:31:35.343997+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XffB803694p2jjB4qqvXQ5 ENCSR000AUX https://www.encodeproject.org/experiments/ENCSR000AUX "histone,histone modification,narrow histone mark" H2AFZ-human B cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF827YIB https://www.encodeproject.org/files/ENCFF827YIB/@@download/ENCFF827YIB.bam ENCFF643RQZ https://www.encodeproject.org/files/ENCFF643RQZ/@@download/ENCFF643RQZ.bam 27.7 M 0 21.2 M 0.763 SE 36 36 native 0.0 M 16.5 M 6.7 M 0.242 0.44 0.42 1.70 185 1.50 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cf5586c-a940-4f3f-a697-cfdd8eb504c8/@@download/cross_correlation_plot/ENCFF000ANE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABN bradley-bernstein:DNA_Lib 956 ENCFF000ANE HiSeq 2000 2016-11-11T15:31:23.624425+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XffKQ03692p5FvYJKvGfPf ENCSR000AUP https://www.encodeproject.org/experiments/ENCSR000AUP "histone,histone modification,narrow histone mark" H3K27ac-human B cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF013CQR https://www.encodeproject.org/files/ENCFF013CQR/@@download/ENCFF013CQR.bam ENCFF970SMS https://www.encodeproject.org/files/ENCFF970SMS/@@download/ENCFF970SMS.bam 39.6 M 0 35.7 M 0.901 SE 36 None 0.0 M 28.4 M 23.6 M 0.596 0.84 0.85 6.75 245 1.31 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a625e2d-5733-4741-9e77-5b2abb297124/@@download/cross_correlation_plot/ENCFF000ANT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIK bradley-bernstein:DNA_Lib 2033 ENCFF000ANT HiSeq 2000 2016-07-13T02:51:36.678915+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z62803693Gpj8BkZvvgqP ENCSR000AUP https://www.encodeproject.org/experiments/ENCSR000AUP "histone,histone modification,narrow histone mark" H3K27ac-human B cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF474VOO https://www.encodeproject.org/files/ENCFF474VOO/@@download/ENCFF474VOO.bam ENCFF925MXS https://www.encodeproject.org/files/ENCFF925MXS/@@download/ENCFF925MXS.bam 81.9 M 0 70.8 M 0.865 SE 36 None 0.0 M 56.0 M 41.4 M 0.506 0.76 0.76 4.11 280 1.21 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9918c52-4ec5-49da-941a-c06b770da86f/@@download/cross_correlation_plot/ENCFF000ANV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIN bradley-bernstein:DNA_Lib 2047 ENCFF000ANV HiSeq 2000 2016-07-13T02:54:42.545120+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z64j036902Vz1B1Zb0kXg ENCSR162DGX https://www.encodeproject.org/experiments/ENCSR162DGX "histone,histone modification,broad histone mark" H3K27me3-human B cell primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF578PVF https://www.encodeproject.org/files/ENCFF578PVF/@@download/ENCFF578PVF.bam ENCFF630LLD https://www.encodeproject.org/files/ENCFF630LLD/@@download/ENCFF630LLD.bam 75.9 M 0 72.5 M 0.956 SE "76,36" 36 36 0.0 M 55.4 M 51.5 M 0.679 0.93 0.93 14.65 240 1.02 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab25dfda-5d37-472b-ad1b-e62623adfeba/@@download/cross_correlation_plot/ENCFF257BOR-ENCFF726BGD-ENCFF864CRK_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB452TRM bradley-bernstein:DNA_Lib 2043 "ENCFF257BOR,ENCFF726BGD,ENCFF864CRK" "HiSeq 2000,HiSeq 2500" 2016-12-14T22:59:55.961716+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F188JPQ0369J92qZ2Bf6232Y ENCSR162DGX https://www.encodeproject.org/experiments/ENCSR162DGX "histone,histone modification,broad histone mark" H3K27me3-human B cell primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF454ZLD https://www.encodeproject.org/files/ENCFF454ZLD/@@download/ENCFF454ZLD.bam ENCFF632MQM https://www.encodeproject.org/files/ENCFF632MQM/@@download/ENCFF632MQM.bam 33.5 M 0 31.7 M 0.946 SE 36 36 36 0.0 M 24.7 M 15.6 M 0.467 0.66 0.66 2.88 185 1.03 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/0cfcd68b-e08c-411e-b4c3-d941f54175f1/@@download/cross_correlation_plot/ENCFF500ATS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB366WQS bradley-bernstein:DNA_Lib 2658 ENCFF500ATS HiSeq 2000 2016-12-14T22:54:31.393173+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F188Jb00369PgB8z7B0Bvx7p ENCSR424XBP https://www.encodeproject.org/experiments/ENCSR424XBP "histone,histone modification,broad histone mark" H3K36me3-human B cell primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF587OEV https://www.encodeproject.org/files/ENCFF587OEV/@@download/ENCFF587OEV.bam ENCFF120IXT https://www.encodeproject.org/files/ENCFF120IXT/@@download/ENCFF120IXT.bam 26.8 M 0 22.4 M 0.836 SE 36 36 native 0.0 M 16.5 M 7.3 M 0.273 0.48 0.45 1.81 195 1.09 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7711f24-c504-4f15-8c90-2a0667682466/@@download/cross_correlation_plot/ENCFF176JYU-ENCFF301NHG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB480MDY bradley-bernstein:DNA_Lib 952 "ENCFF301NHG,ENCFF176JYU" HiSeq 2000 2016-11-05T17:39:41.176752+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjY7003697bbG5kk861zB4 ENCSR424XBP https://www.encodeproject.org/experiments/ENCSR424XBP "histone,histone modification,broad histone mark" H3K36me3-human B cell primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF212BRW https://www.encodeproject.org/files/ENCFF212BRW/@@download/ENCFF212BRW.bam ENCFF025OQR https://www.encodeproject.org/files/ENCFF025OQR/@@download/ENCFF025OQR.bam 43.1 M 0 42.2 M 0.979 SE 36 36 native 0.0 M 31.8 M 14.0 M 0.324 0.46 0.45 1.82 190 1.02 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/503508b7-93b1-4f10-ab0d-9121408dd9ab/@@download/cross_correlation_plot/ENCFF472PZF-ENCFF895ZRY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB896GWS bradley-bernstein:DNA_Lib 3035 "ENCFF472PZF,ENCFF895ZRY" HiSeq 2000 2016-11-05T17:40:00.515847+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjYG803696kxzJj982F0yJ ENCSR290YLQ https://www.encodeproject.org/experiments/ENCSR290YLQ "histone,histone modification,broad histone mark" H3K4me1-human B cell primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF144KPF https://www.encodeproject.org/files/ENCFF144KPF/@@download/ENCFF144KPF.bam ENCFF935LRD https://www.encodeproject.org/files/ENCFF935LRD/@@download/ENCFF935LRD.bam 42.1 M 0 40.8 M 0.969 SE 36 36 native 0.0 M 32.7 M 30.8 M 0.732 0.95 0.95 19.35 235 1.13 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/fdc2ed1a-dd09-4986-a4d2-7a1b70155213/@@download/cross_correlation_plot/ENCFF968ZDD-ENCFF107GUJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB970ANP bradley-bernstein:DNA_Lib 2030 "ENCFF968ZDD,ENCFF107GUJ" HiSeq 2000 2016-11-05T17:41:57.398149+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjXg803698kJz2gxb7gbxj ENCSR290YLQ https://www.encodeproject.org/experiments/ENCSR290YLQ "histone,histone modification,broad histone mark" H3K4me1-human B cell primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF716OOU https://www.encodeproject.org/files/ENCFF716OOU/@@download/ENCFF716OOU.bam ENCFF231CHL https://www.encodeproject.org/files/ENCFF231CHL/@@download/ENCFF231CHL.bam 94.0 M 0 87.7 M 0.933 SE 36 36 native 0.0 M 67.9 M 62.6 M 0.666 0.93 0.93 13.46 200 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/e945d92c-cc70-4afc-839c-a74896e49e9c/@@download/cross_correlation_plot/ENCFF653MQR-ENCFF031DVC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB269HCT bradley-bernstein:DNA_Lib 2045 "ENCFF653MQR,ENCFF031DVC" HiSeq 2000 2016-11-05T17:42:42.568421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjXv003691xQxpZGpbfB4f ENCSR000AUY https://www.encodeproject.org/experiments/ENCSR000AUY "histone,histone modification,narrow histone mark" H3K4me2-human B cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF367CGW https://www.encodeproject.org/files/ENCFF367CGW/@@download/ENCFF367CGW.bam ENCFF095ERC https://www.encodeproject.org/files/ENCFF095ERC/@@download/ENCFF095ERC.bam 42.9 M 0 41.4 M 0.966 SE 36 36 native 0.0 M 33.8 M 27.2 M 0.635 0.82 0.82 5.53 200 1.35 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/a17f9113-7177-4943-a1f2-f6a475dada2d/@@download/cross_correlation_plot/ENCFF000ANI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALX bradley-bernstein:DNA_Lib 2237 ENCFF000ANI HiSeq 2000 2016-11-11T15:26:08.797689+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg68Q03690GY00B90p6vyb ENCSR000AUY https://www.encodeproject.org/experiments/ENCSR000AUY "histone,histone modification,narrow histone mark" H3K4me2-human B cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF034BLI https://www.encodeproject.org/files/ENCFF034BLI/@@download/ENCFF034BLI.bam ENCFF687DKR https://www.encodeproject.org/files/ENCFF687DKR/@@download/ENCFF687DKR.bam 56.8 M 0 51.4 M 0.904 SE 36 36 native 0.0 M 42.5 M 16.5 M 0.290 0.43 0.42 1.76 205 1.66 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/68ed4b19-8306-439f-bc7f-f4ca62be7463/@@download/cross_correlation_plot/ENCFF000ANH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALY bradley-bernstein:DNA_Lib 949 ENCFF000ANH HiSeq 2000 2016-11-11T15:26:20.936655+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg6G80369PxQkg0xY3PZ8j ENCSR878JSF https://www.encodeproject.org/experiments/ENCSR878JSF "histone,histone modification,narrow histone mark" H3K4me3-human B cell primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF136RVA https://www.encodeproject.org/files/ENCFF136RVA/@@download/ENCFF136RVA.bam ENCFF733LUV https://www.encodeproject.org/files/ENCFF733LUV/@@download/ENCFF733LUV.bam 51.9 M 0 46.9 M 0.904 SE 36 36 native 0.0 M 36.1 M 21.8 M 0.419 0.62 0.77 6.09 205 1.35 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/88245a10-e0a8-49a0-b9d4-e6bfb303ec4e/@@download/cross_correlation_plot/ENCFF751FJK-ENCFF715ZJM-ENCFF659TTV-ENCFF527EXT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB214ZQY,ENCLB728KKD" "bradley-bernstein:DNA_Lib 2437,bradley-bernstein:DNA_Lib 951" "ENCFF715ZJM,ENCFF659TTV,ENCFF751FJK,ENCFF527EXT" HiSeq 2000 2016-11-05T17:40:55.866921+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjY1803696gP4JvV866KJB ENCSR051VDI https://www.encodeproject.org/experiments/ENCSR051VDI "histone,histone modification,broad histone mark" H3K79me2-human B cell primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF571MJE https://www.encodeproject.org/files/ENCFF571MJE/@@download/ENCFF571MJE.bam ENCFF248NJJ https://www.encodeproject.org/files/ENCFF248NJJ/@@download/ENCFF248NJJ.bam 43.0 M 0 41.2 M 0.959 SE 36 36 native 0.0 M 30.8 M 28.8 M 0.669 0.94 0.94 16.39 85 1.03 0.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/91ddc3cc-3d61-4ea0-a829-21b3f028e126/@@download/cross_correlation_plot/ENCFF887PXD-ENCFF894XGX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB091KVS bradley-bernstein:DNA_Lib 2052 "ENCFF894XGX,ENCFF887PXD" HiSeq 2000 2016-11-05T17:41:47.632099+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjYg003696zP1V5JfxK1gF ENCSR799SLA https://www.encodeproject.org/experiments/ENCSR799SLA "histone,histone modification,narrow histone mark" H3K9ac-human B cell primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF187AIG https://www.encodeproject.org/files/ENCFF187AIG/@@download/ENCFF187AIG.bam ENCFF094FSB https://www.encodeproject.org/files/ENCFF094FSB/@@download/ENCFF094FSB.bam 31.5 M 0 30.4 M 0.966 SE 36 36 native 0.0 M 23.9 M 19.4 M 0.615 0.82 0.82 5.37 265 1.09 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/00c250c4-1cbc-463e-bee9-691edf51c3f5/@@download/cross_correlation_plot/ENCFF859BLD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB141BRI bradley-bernstein:DNA_Lib 2032 ENCFF859BLD HiSeq 2000 2017-01-13T21:55:41.595560+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vYKkj0369J7g4PP29Q5v12 ENCSR799SLA https://www.encodeproject.org/experiments/ENCSR799SLA "histone,histone modification,narrow histone mark" H3K9ac-human B cell primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF941TVO https://www.encodeproject.org/files/ENCFF941TVO/@@download/ENCFF941TVO.bam ENCFF338FIT https://www.encodeproject.org/files/ENCFF338FIT/@@download/ENCFF338FIT.bam 35.1 M 0 32.7 M 0.930 SE 36 36 native 0.0 M 25.2 M 19.8 M 0.564 0.79 0.92 13.18 215 1.47 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c0c3dc9-4929-4060-8e4d-fbd0323a5d93/@@download/cross_correlation_plot/ENCFF218EPE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB476GGV bradley-bernstein:DNA_Lib 2435 ENCFF218EPE HiSeq 2000 2017-01-13T21:57:18.409942+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vYKz803694b3BKKfzq6fxV ENCSR005WWZ https://www.encodeproject.org/experiments/ENCSR005WWZ "histone,histone modification,broad histone mark" H3K9me3-human B cell primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF620CYO https://www.encodeproject.org/files/ENCFF620CYO/@@download/ENCFF620CYO.bam ENCFF972BXK https://www.encodeproject.org/files/ENCFF972BXK/@@download/ENCFF972BXK.bam 24.3 M 0 23.3 M 0.961 SE 36 36 native 0.0 M 15.3 M 5.1 M 0.210 0.35 0.33 1.63 215 1.11 2.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/8cc85416-87e2-4645-8ccf-23b628f00ab1/@@download/cross_correlation_plot/ENCFF862SMM-ENCFF856PUW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB035MZA bradley-bernstein:DNA_Lib 958 "ENCFF856PUW,ENCFF862SMM" HiSeq 2000 2016-11-05T17:39:10.502290+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjYVQ036945FQkxk8GJPB5 ENCSR000AVJ https://www.encodeproject.org/experiments/ENCSR000AVJ "histone,histone modification,broad histone mark" H4K20me1-human B cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF600LOC https://www.encodeproject.org/files/ENCFF600LOC/@@download/ENCFF600LOC.bam ENCFF006VMT https://www.encodeproject.org/files/ENCFF006VMT/@@download/ENCFF006VMT.bam 25.0 M 0 22.9 M 0.915 SE 36 36 native 0.0 M 17.3 M 14.5 M 0.580 0.85 0.85 6.43 260 1.02 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/b344b141-4992-4246-a4e6-76a8ff9da256/@@download/cross_correlation_plot/ENCFF000ANW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAE bradley-bernstein:DNA_Lib 2034 ENCFF000ANW HiSeq 2000 2016-11-07T03:12:49.877421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJzZQ03696Zj590J8YzbfK ENCSR000AVJ https://www.encodeproject.org/experiments/ENCSR000AVJ "histone,histone modification,broad histone mark" H4K20me1-human B cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF899ACE https://www.encodeproject.org/files/ENCFF899ACE/@@download/ENCFF899ACE.bam ENCFF871KTN https://www.encodeproject.org/files/ENCFF871KTN/@@download/ENCFF871KTN.bam 37.8 M 0 31.6 M 0.838 SE 36 36 native 0.0 M 24.2 M 11.3 M 0.300 0.49 0.49 2.04 235 1.05 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b9a41cc-e33c-45e6-aef1-d6f9b54aeab8/@@download/cross_correlation_plot/ENCFF000ANZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAF bradley-bernstein:DNA_Lib 2050 ENCFF000ANZ HiSeq 2000 2016-11-07T03:13:00.167962+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJzkj036945FQkxk8GJXX0 ENCSR001KCX https://www.encodeproject.org/experiments/ENCSR001KCX control Control-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF956GLJ https://www.encodeproject.org/files/ENCFF956GLJ/@@download/ENCFF956GLJ.bam ENCFF333KJQ https://www.encodeproject.org/files/ENCFF333KJQ/@@download/ENCFF333KJQ.bam 98.0 M 0 94.6 M 0.966 PE 76 76 native 40.3 M 0.0 M 27.6 M 0.563 0.68 0.67 2.90 190 1.07 17.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d60540b-e2ea-4d4f-8662-bf462f122606/@@download/cross_correlation_plot/ENCFF869EIB-ENCFF126GOB_pooledENCFF300LJR-ENCFF146JNK_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB472FIM bradley-bernstein:DNA_Lib 7021 "ENCFF126GOB,ENCFF300LJR,ENCFF146JNK,ENCFF869EIB" HiSeq 2500 2016-10-26T23:48:25.890651+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F083Y980369GJ6xQfbB7BkgJ ENCSR001KCX https://www.encodeproject.org/experiments/ENCSR001KCX control Control-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF687LIL https://www.encodeproject.org/files/ENCFF687LIL/@@download/ENCFF687LIL.bam ENCFF286BOX https://www.encodeproject.org/files/ENCFF286BOX/@@download/ENCFF286BOX.bam 244.0 M 0 235.1 M 0.964 PE 76 76 native 99.5 M 0.0 M 97.5 M 0.799 0.98 0.98 52.97 185 1.03 -18.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/9803ad0e-cdbc-4c5c-b1e8-d697d788abe4/@@download/cross_correlation_plot/ENCFF641CIT-ENCFF116RUN_pooledENCFF470CVX-ENCFF546EIX_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB483DUI bradley-bernstein:DNA_Lib 8265 "ENCFF470CVX,ENCFF641CIT,ENCFF546EIX,ENCFF116RUN" HiSeq 2500 2016-10-28T23:59:03.402480+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F083YKj036923z1QYVBPkqKQ ENCSR066BZZ https://www.encodeproject.org/experiments/ENCSR066BZZ "transcription factor,RNA binding protein" CTCF-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF202XBB https://www.encodeproject.org/files/ENCFF202XBB/@@download/ENCFF202XBB.bam ENCFF231COD https://www.encodeproject.org/files/ENCFF231COD/@@download/ENCFF231COD.bam 81.9 M 0 79.2 M 0.966 PE 76 76 native 34.7 M 0.0 M 24.0 M 0.585 0.69 0.68 3.10 190 2.37 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4ad71c8-9311-41b2-b685-30fea610cb5c/@@download/cross_correlation_plot/ENCFF727LRAENCFF409OHJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB109JJP bradley-bernstein:DNA_Lib 6633 "ENCFF409OHJ,ENCFF727LRA" HiSeq 2500 2016-10-19T16:43:59.461694+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q7F80369JJz4jV53b4Fy3 ENCSR066BZZ https://www.encodeproject.org/experiments/ENCSR066BZZ "transcription factor,RNA binding protein" CTCF-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF589DKU https://www.encodeproject.org/files/ENCFF589DKU/@@download/ENCFF589DKU.bam ENCFF916ERF https://www.encodeproject.org/files/ENCFF916ERF/@@download/ENCFF916ERF.bam 65.4 M 0 63.4 M 0.970 PE 76 76 native 27.6 M 0.0 M 25.6 M 0.782 0.93 0.93 13.67 220 2.14 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/418757db-f62e-4b4e-8b20-4d816389e9e0/@@download/cross_correlation_plot/ENCFF499UAPENCFF268HPC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB863GNC bradley-bernstein:DNA_Lib 6732 "ENCFF499UAP,ENCFF268HPC" HiSeq 2500 2016-10-19T16:44:19.219320+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q7P00369P3fb6Yb3bpyzf ENCSR886KKK https://www.encodeproject.org/experiments/ENCSR886KKK "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF274DDB https://www.encodeproject.org/files/ENCFF274DDB/@@download/ENCFF274DDB.bam ENCFF006GXQ https://www.encodeproject.org/files/ENCFF006GXQ/@@download/ENCFF006GXQ.bam 60.2 M 0 58.2 M 0.966 PE 76 76 native 24.6 M 0.0 M 22.9 M 0.762 0.93 0.93 14.20 205 1.23 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/833e7c55-ad9c-4922-a198-95c84bfe8365/@@download/cross_correlation_plot/ENCFF956SSUENCFF919EOD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB430DDM bradley-bernstein:DNA_Lib 6728 "ENCFF919EOD,ENCFF956SSU" HiSeq 2500 2016-10-19T17:11:43.533819+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QGZ80369K3kYyb13jpFyf ENCSR886KKK https://www.encodeproject.org/experiments/ENCSR886KKK "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF954MFY https://www.encodeproject.org/files/ENCFF954MFY/@@download/ENCFF954MFY.bam ENCFF773PZJ https://www.encodeproject.org/files/ENCFF773PZJ/@@download/ENCFF773PZJ.bam 67.1 M 0 65.3 M 0.974 PE 76 76 native 28.4 M 0.0 M 22.6 M 0.674 0.80 0.79 4.65 200 1.22 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/390f06ec-ceb2-40e1-9e08-439ad0aec7fd/@@download/cross_correlation_plot/ENCFF103FNHENCFF383JIP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB283SNO bradley-bernstein:DNA_Lib 6642 "ENCFF103FNH,ENCFF383JIP" HiSeq 2500 2016-10-19T17:14:45.414157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QGjQ03695FyfXK13ZvPYj ENCSR983CSB https://www.encodeproject.org/experiments/ENCSR983CSB "histone,histone modification,narrow histone mark" H2AFZ-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF047IEH https://www.encodeproject.org/files/ENCFF047IEH/@@download/ENCFF047IEH.bam ENCFF493OWE https://www.encodeproject.org/files/ENCFF493OWE/@@download/ENCFF493OWE.bam 82.8 M 0 81.4 M 0.982 PE 76 76 native 36.6 M 0.0 M 35.6 M 0.860 0.97 0.97 35.61 170 1.10 2.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/22876cdb-f7c9-4cd4-b728-79e9a9e03e10/@@download/cross_correlation_plot/ENCFF188WPEENCFF468FFN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB147HYH bradley-bernstein:DNA_Lib 6635 "ENCFF468FFN,ENCFF188WPE" HiSeq 2500 2016-10-19T17:01:46.184963+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q9x003690fVXfKk3bqZ58 ENCSR983CSB https://www.encodeproject.org/experiments/ENCSR983CSB "histone,histone modification,narrow histone mark" H2AFZ-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF017KFY https://www.encodeproject.org/files/ENCFF017KFY/@@download/ENCFF017KFY.bam ENCFF170KJJ https://www.encodeproject.org/files/ENCFF170KJJ/@@download/ENCFF170KJJ.bam 78.3 M 0 76.5 M 0.977 PE 76 76 native 34.0 M 0.0 M 33.0 M 0.842 0.97 0.97 33.20 185 1.11 2.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa21955b-71b5-4942-adb3-a9363ef1a3ad/@@download/cross_correlation_plot/ENCFF052FGXENCFF784WWD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB564WHV bradley-bernstein:DNA_Lib 6717 "ENCFF784WWD,ENCFF052FGX" HiSeq 2500 2016-10-19T17:01:32.118907+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QB1Q0369JJz4jV53b4FzV ENCSR683ORH https://www.encodeproject.org/experiments/ENCSR683ORH "histone,histone modification,broad histone mark" H3F3A-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF383IPA https://www.encodeproject.org/files/ENCFF383IPA/@@download/ENCFF383IPA.bam ENCFF375MOW https://www.encodeproject.org/files/ENCFF375MOW/@@download/ENCFF375MOW.bam 74.1 M 0 71.0 M 0.958 PE 76 76 native 30.3 M 0.0 M 29.9 M 0.806 0.98 0.98 63.78 180 1.07 4.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a689380-a7ff-43bf-8712-a9641b9eb9a5/@@download/cross_correlation_plot/ENCFF344APOENCFF938YKU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB331ZJN bradley-bernstein:DNA_Lib 6727 "ENCFF344APO,ENCFF938YKU" HiSeq 2500 2016-10-19T17:00:43.223816+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q9Gj03691Q3XZXJ3Yj3Zb ENCSR683ORH https://www.encodeproject.org/experiments/ENCSR683ORH "histone,histone modification,broad histone mark" H3F3A-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF212IFJ https://www.encodeproject.org/files/ENCFF212IFJ/@@download/ENCFF212IFJ.bam ENCFF604UZO https://www.encodeproject.org/files/ENCFF604UZO/@@download/ENCFF604UZO.bam 82.1 M 0 79.6 M 0.969 PE 76 76 native 35.1 M 0.0 M 34.0 M 0.828 0.97 0.97 33.41 175 1.08 3.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/17c679ee-5800-4b1a-8114-d5284c2132b2/@@download/cross_correlation_plot/ENCFF726NNCENCFF405WGL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB629SEB bradley-bernstein:DNA_Lib 6643 "ENCFF405WGL,ENCFF726NNC" HiSeq 2500 2016-10-19T17:00:31.511940+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q9V80369JJz4jV53b4Fz7 ENCSR905TYC https://www.encodeproject.org/experiments/ENCSR905TYC "histone,histone modification,narrow histone mark" H3K27ac-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF017WUP https://www.encodeproject.org/files/ENCFF017WUP/@@download/ENCFF017WUP.bam ENCFF798RXC https://www.encodeproject.org/files/ENCFF798RXC/@@download/ENCFF798RXC.bam 85.0 M 0 82.9 M 0.976 PE 76 76 native 37.6 M 0.0 M 35.5 M 0.836 0.94 0.94 17.58 190 1.74 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee867ecf-e367-4ed0-9662-1cbc80206c15/@@download/cross_correlation_plot/ENCFF214IZXENCFF792DKM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB695WYQ bradley-bernstein:DNA_Lib 6632 "ENCFF792DKM,ENCFF214IZX" HiSeq 2500 2016-10-19T17:15:28.052178+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QGpQ03690BBF6Px3bBP4X ENCSR905TYC https://www.encodeproject.org/experiments/ENCSR905TYC "histone,histone modification,narrow histone mark" H3K27ac-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF751YAL https://www.encodeproject.org/files/ENCFF751YAL/@@download/ENCFF751YAL.bam ENCFF374WOL https://www.encodeproject.org/files/ENCFF374WOL/@@download/ENCFF374WOL.bam 49.0 M 0 47.7 M 0.972 PE 76 76 native 21.4 M 0.0 M 20.7 M 0.844 0.97 0.97 30.67 235 1.78 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/850095f6-3f1e-44ec-9541-046f2981a20b/@@download/cross_correlation_plot/ENCFF988WZZENCFF479PGG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB946YYC bradley-bernstein:DNA_Lib 6724 "ENCFF988WZZ,ENCFF479PGG" HiSeq 2500 2016-10-19T17:11:32.450939+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QGz003691Q3XZXJ3Yj3fp ENCSR472SEY https://www.encodeproject.org/experiments/ENCSR472SEY "histone,histone modification,broad histone mark" H3K27me3-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF122QYC https://www.encodeproject.org/files/ENCFF122QYC/@@download/ENCFF122QYC.bam ENCFF601UUK https://www.encodeproject.org/files/ENCFF601UUK/@@download/ENCFF601UUK.bam 78.8 M 0 76.6 M 0.972 PE 76 76 native 32.3 M 0.0 M 29.0 M 0.736 0.90 0.90 9.58 170 1.11 3.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ab392b1-b230-4c43-a606-96657b97d393/@@download/cross_correlation_plot/ENCFF765LQMENCFF414HZK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB471UYK bradley-bernstein:DNA_Lib 6631 "ENCFF765LQM,ENCFF414HZK" HiSeq 2500 2016-10-19T17:01:06.858467+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q9680369Ppk4kkb0Xj2By ENCSR472SEY https://www.encodeproject.org/experiments/ENCSR472SEY "histone,histone modification,broad histone mark" H3K27me3-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF399QGQ https://www.encodeproject.org/files/ENCFF399QGQ/@@download/ENCFF399QGQ.bam ENCFF760ALP https://www.encodeproject.org/files/ENCFF760ALP/@@download/ENCFF760ALP.bam 54.2 M 0 52.3 M 0.964 PE 76 76 native 21.8 M 0.0 M 20.6 M 0.761 0.95 0.95 18.81 225 1.10 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e1e102a-3dcd-4643-ad95-298d950d689a/@@download/cross_correlation_plot/ENCFF904UMMENCFF564DOM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB617PES bradley-bernstein:DNA_Lib 6725 "ENCFF904UMM,ENCFF564DOM" HiSeq 2500 2016-10-19T16:56:33.240653+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q9BQ03690fVXfKk3bqZ4Z ENCSR375IXS https://www.encodeproject.org/experiments/ENCSR375IXS "histone,histone modification,broad histone mark" H3K36me3-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF258MNP https://www.encodeproject.org/files/ENCFF258MNP/@@download/ENCFF258MNP.bam ENCFF301ESN https://www.encodeproject.org/files/ENCFF301ESN/@@download/ENCFF301ESN.bam 61.9 M 0 59.4 M 0.959 PE 76 76 native 24.0 M 0.0 M 23.4 M 0.757 0.97 0.97 39.89 215 1.08 5.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ad00e0a-2f0e-4e6c-a4d3-8d44e0c6f7e6/@@download/cross_correlation_plot/ENCFF050AHDENCFF113RRP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB784BNS bradley-bernstein:DNA_Lib 6720 "ENCFF113RRP,ENCFF050AHD" HiSeq 2500 2016-10-19T17:05:34.473463+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QFzj03690BBF6Px3bBP3q ENCSR375IXS https://www.encodeproject.org/experiments/ENCSR375IXS "histone,histone modification,broad histone mark" H3K36me3-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF724NFX https://www.encodeproject.org/files/ENCFF724NFX/@@download/ENCFF724NFX.bam ENCFF424GBV https://www.encodeproject.org/files/ENCFF424GBV/@@download/ENCFF424GBV.bam 69.0 M 0 66.4 M 0.963 PE 76 76 native 27.4 M 0.0 M 25.7 M 0.744 0.94 0.94 15.51 185 1.08 7.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e4f26a2-f98b-4d0d-8600-7041d42ac9c7/@@download/cross_correlation_plot/ENCFF543UEYENCFF272XNO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB393LQH bradley-bernstein:DNA_Lib 6639 "ENCFF272XNO,ENCFF543UEY" HiSeq 2500 2016-10-19T17:08:44.215620+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QG7Q0369JJz4jV53b4G0p ENCSR301AEA https://www.encodeproject.org/experiments/ENCSR301AEA "histone,histone modification,broad histone mark" H3K4me1-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF213QOR https://www.encodeproject.org/files/ENCFF213QOR/@@download/ENCFF213QOR.bam ENCFF165QJW https://www.encodeproject.org/files/ENCFF165QJW/@@download/ENCFF165QJW.bam 58.8 M 0 57.2 M 0.973 PE 76 76 native 25.9 M 0.0 M 24.7 M 0.841 0.95 0.95 21.11 215 1.12 2.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/97020b62-b4dc-45b3-a8da-5b299a427bd4/@@download/cross_correlation_plot/ENCFF860KWLENCFF100PIL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB624IET bradley-bernstein:DNA_Lib 6718 "ENCFF860KWL,ENCFF100PIL" HiSeq 2500 2016-10-19T16:43:42.422326+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q84Q0369KgxPbx50X8Qv0 ENCSR301AEA https://www.encodeproject.org/experiments/ENCSR301AEA "histone,histone modification,broad histone mark" H3K4me1-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF558QRO https://www.encodeproject.org/files/ENCFF558QRO/@@download/ENCFF558QRO.bam ENCFF999YNS https://www.encodeproject.org/files/ENCFF999YNS/@@download/ENCFF999YNS.bam 78.9 M 0 77.0 M 0.976 PE 76 76 native 35.0 M 0.0 M 31.3 M 0.795 0.90 0.89 9.22 185 1.11 2.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/8277ddb2-21f7-46a3-a69b-b42f35964936/@@download/cross_correlation_plot/ENCFF865LIHENCFF569GMA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB050REL bradley-bernstein:DNA_Lib 6644 "ENCFF569GMA,ENCFF865LIH" HiSeq 2500 2016-10-19T16:46:30.876465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q8980369232QFyJ0kxjFx ENCSR821IAK https://www.encodeproject.org/experiments/ENCSR821IAK "histone,histone modification,narrow histone mark" H3K4me2-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF148CTR https://www.encodeproject.org/files/ENCFF148CTR/@@download/ENCFF148CTR.bam ENCFF733AFZ https://www.encodeproject.org/files/ENCFF733AFZ/@@download/ENCFF733AFZ.bam 85.2 M 0 83.0 M 0.974 PE 76 76 native 37.5 M 0.0 M 34.6 M 0.812 0.92 0.92 12.59 180 1.18 2.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d7a0e89-08fc-4b8e-8f5e-d607d4f13e8d/@@download/cross_correlation_plot/ENCFF976UZKENCFF222REA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB546KWN bradley-bernstein:DNA_Lib 6629 "ENCFF222REA,ENCFF976UZK" HiSeq 2500 2016-10-19T17:04:47.565928+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QFV80369JJz4jV53b4G09 ENCSR821IAK https://www.encodeproject.org/experiments/ENCSR821IAK "histone,histone modification,narrow histone mark" H3K4me2-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF856JAI https://www.encodeproject.org/files/ENCFF856JAI/@@download/ENCFF856JAI.bam ENCFF541MKV https://www.encodeproject.org/files/ENCFF541MKV/@@download/ENCFF541MKV.bam 60.5 M 0 58.5 M 0.967 PE 76 76 native 26.2 M 0.0 M 25.7 M 0.851 0.98 0.98 53.69 230 1.25 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a9066f6-6825-4737-b6db-a1d32e97bca3/@@download/cross_correlation_plot/ENCFF898UIKENCFF179YOS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB144PHR bradley-bernstein:DNA_Lib 6723 "ENCFF179YOS,ENCFF898UIK" HiSeq 2500 2016-10-19T17:02:06.663094+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QFb803695FyfXK13ZvPXF ENCSR849YFO https://www.encodeproject.org/experiments/ENCSR849YFO "histone,histone modification,narrow histone mark" H3K4me3-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF950QWN https://www.encodeproject.org/files/ENCFF950QWN/@@download/ENCFF950QWN.bam ENCFF533UUR https://www.encodeproject.org/files/ENCFF533UUR/@@download/ENCFF533UUR.bam 53.3 M 0 50.9 M 0.955 PE 76 76 native 20.7 M 0.0 M 20.1 M 0.752 0.97 0.97 32.59 235 1.48 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/093912c0-30fb-41dd-96a6-00995a6ddc6e/@@download/cross_correlation_plot/ENCFF629JOPENCFF080FPQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB952SEO bradley-bernstein:DNA_Lib 6726 "ENCFF629JOP,ENCFF080FPQ" HiSeq 2500 2016-10-19T17:11:47.523476+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QJ9003695FyfXK13ZvPZP ENCSR849YFO https://www.encodeproject.org/experiments/ENCSR849YFO "histone,histone modification,narrow histone mark" H3K4me3-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF096QTT https://www.encodeproject.org/files/ENCFF096QTT/@@download/ENCFF096QTT.bam ENCFF029PWO https://www.encodeproject.org/files/ENCFF029PWO/@@download/ENCFF029PWO.bam 79.3 M 0 76.0 M 0.958 PE 76 76 native 30.5 M 0.0 M 28.4 M 0.716 0.93 0.93 14.53 185 1.21 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/096ff0ae-a634-480d-9ce7-2d16c03b3404/@@download/cross_correlation_plot/ENCFF740VDFENCFF352NDL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB591XQH bradley-bernstein:DNA_Lib 6630 "ENCFF352NDL,ENCFF740VDF" HiSeq 2500 2016-10-19T17:15:08.885841+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QJJj0369PY5ZjfV3zyYk0 ENCSR484PTR https://www.encodeproject.org/experiments/ENCSR484PTR "histone,histone modification,broad histone mark" H3K79me2-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF395DAJ https://www.encodeproject.org/files/ENCFF395DAJ/@@download/ENCFF395DAJ.bam ENCFF604YFA https://www.encodeproject.org/files/ENCFF604YFA/@@download/ENCFF604YFA.bam 57.1 M 0 55.5 M 0.972 PE 76 76 native 24.8 M 0.0 M 22.8 M 0.798 0.92 0.92 12.33 190 1.09 2.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe7e731e-0283-4835-89a0-70b005dd39f8/@@download/cross_correlation_plot/ENCFF937PJIENCFF555NRY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB381RRV bradley-bernstein:DNA_Lib 6722 "ENCFF555NRY,ENCFF937PJI" HiSeq 2500 2016-10-19T16:54:03.621904+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q8k80369Ppk4kkb0Xj2BB ENCSR484PTR https://www.encodeproject.org/experiments/ENCSR484PTR "histone,histone modification,broad histone mark" H3K79me2-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF806KRA https://www.encodeproject.org/files/ENCFF806KRA/@@download/ENCFF806KRA.bam ENCFF554VBN https://www.encodeproject.org/files/ENCFF554VBN/@@download/ENCFF554VBN.bam 78.2 M 0 76.7 M 0.980 PE 76 76 native 34.5 M 0.0 M 32.9 M 0.842 0.96 0.96 22.18 180 1.09 2.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/2441a657-3774-46f6-a236-d83fc2c91f6e/@@download/cross_correlation_plot/ENCFF674KCQENCFF782BPP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB671FUW bradley-bernstein:DNA_Lib 6636 "ENCFF674KCQ,ENCFF782BPP" HiSeq 2500 2016-10-19T16:49:44.585434+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q8x80369KqX6Zpb0Q4p81 ENCSR592ETL https://www.encodeproject.org/experiments/ENCSR592ETL "histone,histone modification,narrow histone mark" H3K9ac-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF232COJ https://www.encodeproject.org/files/ENCFF232COJ/@@download/ENCFF232COJ.bam ENCFF279CZG https://www.encodeproject.org/files/ENCFF279CZG/@@download/ENCFF279CZG.bam 27.1 M 0 26.3 M 0.972 SE 76 76 native 0.0 M 24.3 M 20.1 M 0.743 0.83 0.83 5.93 215 1.38 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/da40552a-4c81-4c85-8a1c-aeb614481371/@@download/cross_correlation_plot/ENCFF371MNH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB060MEC bradley-bernstein:DNA_Lib 7017 ENCFF371MNH HiSeq 2500 2016-12-14T18:48:30.036969+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F184Bxj03699Z3Y8493qf6p1 ENCSR175OYG https://www.encodeproject.org/experiments/ENCSR175OYG "histone,histone modification,broad histone mark" H3K9me2-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF300JCZ https://www.encodeproject.org/files/ENCFF300JCZ/@@download/ENCFF300JCZ.bam ENCFF073IJW https://www.encodeproject.org/files/ENCFF073IJW/@@download/ENCFF073IJW.bam 60.1 M 0 58.6 M 0.976 PE 76 76 native 25.6 M 0.0 M 24.4 M 0.813 0.95 0.95 21.17 195 1.07 17.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/452a922a-a84e-4d04-9636-f8110017d23f/@@download/cross_correlation_plot/ENCFF115OOTENCFF469PXQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB738OMX bradley-bernstein:DNA_Lib 6641 "ENCFF115OOT,ENCFF469PXQ" HiSeq 2500 2016-10-19T16:45:51.844975+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q8Xj03690ygQPf50gx826 ENCSR175OYG https://www.encodeproject.org/experiments/ENCSR175OYG "histone,histone modification,broad histone mark" H3K9me2-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF794JHW https://www.encodeproject.org/files/ENCFF794JHW/@@download/ENCFF794JHW.bam ENCFF954KNB https://www.encodeproject.org/files/ENCFF954KNB/@@download/ENCFF954KNB.bam 61.5 M 0 59.4 M 0.967 PE 76 76 native 25.2 M 0.0 M 24.8 M 0.807 0.98 0.98 61.67 200 1.06 11.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc094560-e3d4-421c-8f11-5f36975c9dfb/@@download/cross_correlation_plot/ENCFF616LKQENCFF528DYR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB147HOI bradley-bernstein:DNA_Lib 6730 "ENCFF616LKQ,ENCFF528DYR" HiSeq 2500 2016-10-19T16:46:35.667800+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q8g80369KgxPbx50X8QvV ENCSR247PYK https://www.encodeproject.org/experiments/ENCSR247PYK "histone,histone modification,broad histone mark" H3K9me3-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF118ESN https://www.encodeproject.org/files/ENCFF118ESN/@@download/ENCFF118ESN.bam ENCFF864HKW https://www.encodeproject.org/files/ENCFF864HKW/@@download/ENCFF864HKW.bam 50.1 M 0 46.8 M 0.935 PE 76 76 native 16.3 M 0.0 M 15.5 M 0.618 0.95 0.95 20.55 195 1.10 5.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/d32aed93-3139-4642-9fa5-8ef115109280/@@download/cross_correlation_plot/ENCFF198TGLENCFF866YNW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB839RKP bradley-bernstein:DNA_Lib 6731 "ENCFF198TGL,ENCFF866YNW" HiSeq 2500 2016-10-19T17:05:42.581334+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QG6003695FyfXK13ZvPXq ENCSR247PYK https://www.encodeproject.org/experiments/ENCSR247PYK "histone,histone modification,broad histone mark" H3K9me3-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF468CKI https://www.encodeproject.org/files/ENCFF468CKI/@@download/ENCFF468CKI.bam ENCFF090UIS https://www.encodeproject.org/files/ENCFF090UIS/@@download/ENCFF090UIS.bam 67.1 M 0 63.5 M 0.946 PE 76 76 native 22.2 M 0.0 M 21.4 M 0.638 0.97 0.97 28.68 185 1.12 4.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ecf36a4-1478-4345-ae1c-d8175c74d4cf/@@download/cross_correlation_plot/ENCFF646YODENCFF612BMS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB528LON bradley-bernstein:DNA_Lib 6640 "ENCFF612BMS,ENCFF646YOD" HiSeq 2500 2016-10-19T17:10:21.571912+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QGBj03695FyfXK13ZvPY4 ENCSR821GUG https://www.encodeproject.org/experiments/ENCSR821GUG "histone,histone modification,broad histone mark" H4K20me1-human bipolar neuron in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF810ELC https://www.encodeproject.org/files/ENCFF810ELC/@@download/ENCFF810ELC.bam ENCFF879NVA https://www.encodeproject.org/files/ENCFF879NVA/@@download/ENCFF879NVA.bam 66.4 M 0 64.5 M 0.971 PE 76 76 native 28.2 M 0.0 M 26.2 M 0.789 0.93 0.93 13.93 195 1.08 9.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2e3006b-1755-48e6-8bf2-e461bba79d12/@@download/cross_correlation_plot/ENCFF278ZFIENCFF774ZYF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB639WWE bradley-bernstein:DNA_Lib 6634 "ENCFF774ZYF,ENCFF278ZFI" HiSeq 2500 2016-10-19T17:02:26.334456+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QBzQ03690fVXfKk3bqZ5p ENCSR821GUG https://www.encodeproject.org/experiments/ENCSR821GUG "histone,histone modification,broad histone mark" H4K20me1-human bipolar neuron in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF368BGV https://www.encodeproject.org/files/ENCFF368BGV/@@download/ENCFF368BGV.bam ENCFF608HAL https://www.encodeproject.org/files/ENCFF608HAL/@@download/ENCFF608HAL.bam 72.7 M 0 70.5 M 0.971 PE 76 76 native 30.7 M 0.0 M 27.4 M 0.754 0.89 0.89 9.07 200 1.07 14.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/91375ac6-872b-45d9-b095-67ae81eca899/@@download/cross_correlation_plot/ENCFF732GMPENCFF193PCC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB351ZFU bradley-bernstein:DNA_Lib 6721 "ENCFF732GMP,ENCFF193PCC" HiSeq 2500 2016-10-19T17:02:36.984163+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03QF3j0369P3fb6Yb3bpz0j ENCSR099LGH https://www.encodeproject.org/experiments/ENCSR099LGH control Control-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF590RZJ https://www.encodeproject.org/files/ENCFF590RZJ/@@download/ENCFF590RZJ.bam ENCFF139OBG https://www.encodeproject.org/files/ENCFF139OBG/@@download/ENCFF139OBG.bam 126.1 M 0 122.5 M 0.971 SE 76 76 native 0.0 M 105.8 M 100.9 M 0.800 0.96 0.96 24.03 240 1.00 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/6eac52b2-68c1-49d0-80b4-e5e84a58b881/@@download/cross_correlation_plot/ENCFF947ZSK-ENCFF953XTR-ENCFF636HAV-ENCFF839TPC-ENCFF198OWI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB346ISX bradley-bernstein:DNA_Lib 7586 "ENCFF947ZSK,ENCFF636HAV,ENCFF839TPC,ENCFF953XTR,ENCFF198OWI" HiSeq 2500 2017-01-31T16:02:00.007030+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27jQ6Q036916F1fJ0XbGJXV ENCSR833HBT https://www.encodeproject.org/experiments/ENCSR833HBT control Control-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF228XSQ https://www.encodeproject.org/files/ENCFF228XSQ/@@download/ENCFF228XSQ.bam ENCFF775HII https://www.encodeproject.org/files/ENCFF775HII/@@download/ENCFF775HII.bam 59.4 M 0 57.6 M 0.971 SE 76 76 native 0.0 M 51.2 M 50.0 M 0.843 0.98 0.98 49.51 95 1.00 0.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc626731-6805-4ef6-8d5e-3393072e75df/@@download/cross_correlation_plot/ENCFF056UQL-ENCFF306TBR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB082ODG bradley-bernstein:DNA_Lib 8234 "ENCFF306TBR,ENCFF056UQL" HiSeq 2500 2016-10-27T22:04:37.080646+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091QkQ0369JYX7855VG03zB ENCSR888RBQ https://www.encodeproject.org/experiments/ENCSR888RBQ control Control-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF644ZVV https://www.encodeproject.org/files/ENCFF644ZVV/@@download/ENCFF644ZVV.bam ENCFF275WVX https://www.encodeproject.org/files/ENCFF275WVX/@@download/ENCFF275WVX.bam 66.1 M 0 64.4 M 0.974 SE 76 None 0.0 M 56.0 M 54.7 M 0.827 0.98 0.98 54.45 245 1.01 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6487772-a674-4401-9b6b-0465fa67d2ea/@@download/cross_correlation_plot/ENCFF295VZD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB250SXQ bradley-bernstein:DNA_Lib 7449 ENCFF295VZD HiSeq 2500 2016-05-25T14:16:39.049126+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx28gV003699K213jVV45f1q ENCSR520BIM https://www.encodeproject.org/experiments/ENCSR520BIM "histone,histone modification,narrow histone mark" H3K27ac-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF708ZJH https://www.encodeproject.org/files/ENCFF708ZJH/@@download/ENCFF708ZJH.bam ENCFF379IUP https://www.encodeproject.org/files/ENCFF379IUP/@@download/ENCFF379IUP.bam 62.7 M 0 61.3 M 0.977 SE "76,72" 72 native 0.0 M 56.6 M 45.0 M 0.718 0.82 0.83 6.18 200 1.21 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/fbc3d440-9c4e-49e3-82fc-c11b174897e7/@@download/cross_correlation_plot/ENCFF479ECJ-ENCFF770ACG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB105BKL,ENCLB591YZH" "bradley-bernstein:DNA_Lib 7446,bradley-bernstein:DNA_Lib 7697" "ENCFF479ECJ,ENCFF770ACG" HiSeq 2500 2016-10-27T22:26:26.164279+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F093xqQ03695YX1xgJBKFyxF ENCSR520BIM https://www.encodeproject.org/experiments/ENCSR520BIM "histone,histone modification,narrow histone mark" H3K27ac-human body of pancreas tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF811QJL https://www.encodeproject.org/files/ENCFF811QJL/@@download/ENCFF811QJL.bam ENCFF904QHP https://www.encodeproject.org/files/ENCFF904QHP/@@download/ENCFF904QHP.bam 40.5 M 0 39.4 M 0.973 SE 76 None 0.0 M 36.2 M 34.2 M 0.843 0.94 0.95 20.09 245 1.25 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/753c2ae0-3664-472e-aa29-cd3a9cb6f170/@@download/cross_correlation_plot/ENCFF133UID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB020GKP bradley-bernstein:DNA_Lib 7775 ENCFF133UID HiSeq 2500 2016-06-01T18:28:56.239328+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70J0Q0369K8Y367vFGXbpz ENCSR596PFU https://www.encodeproject.org/experiments/ENCSR596PFU "histone,histone modification,narrow histone mark" H3K27ac-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF785RYZ https://www.encodeproject.org/files/ENCFF785RYZ/@@download/ENCFF785RYZ.bam ENCFF485ABP https://www.encodeproject.org/files/ENCFF485ABP/@@download/ENCFF485ABP.bam 29.4 M 0 28.5 M 0.969 SE 76 76 native 0.0 M 26.2 M 25.1 M 0.853 0.96 0.96 29.05 250 1.33 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0194742-991e-4a98-9e01-f7d8c8ed38ed/@@download/cross_correlation_plot/ENCFF015KLH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB149DDE bradley-bernstein:DNA_Lib 7583 ENCFF015KLH HiSeq 2500 2016-08-09T16:51:22.651823+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV6vj0369GFvV7jG2Q3FJq ENCSR748TFF https://www.encodeproject.org/experiments/ENCSR748TFF "histone,histone modification,narrow histone mark" H3K27ac-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF233XIN https://www.encodeproject.org/files/ENCFF233XIN/@@download/ENCFF233XIN.bam ENCFF353QUI https://www.encodeproject.org/files/ENCFF353QUI/@@download/ENCFF353QUI.bam 33.4 M 0 29.7 M 0.890 SE 76 76 native 0.0 M 26.6 M 24.0 M 0.719 0.90 0.90 10.40 190 1.08 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/371268ec-f34b-4378-b6bd-0bfb4186a683/@@download/cross_correlation_plot/ENCFF517EHH-ENCFF579QWM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB264NMN bradley-bernstein:DNA_Lib 8158 "ENCFF579QWM,ENCFF517EHH" HiSeq 2500 2016-10-31T13:26:24.823322+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8Yb003692404175P5YvYx ENCSR774CFO https://www.encodeproject.org/experiments/ENCSR774CFO "histone,histone modification,broad histone mark" H3K27me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF880JQE https://www.encodeproject.org/files/ENCFF880JQE/@@download/ENCFF880JQE.bam ENCFF746BJJ https://www.encodeproject.org/files/ENCFF746BJJ/@@download/ENCFF746BJJ.bam 95.4 M 0 92.2 M 0.966 SE 76 76 native 0.0 M 81.0 M 67.5 M 0.707 0.83 0.83 5.76 220 1.01 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/384c6830-cc5a-4e7e-9ad1-e33dca48912f/@@download/cross_correlation_plot/ENCFF920FIQ-ENCFF574AEY-ENCFF880JQP-ENCFF556WOH-ENCFF901KFC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB672ZYK bradley-bernstein:DNA_Lib 7582 "ENCFF880JQP,ENCFF901KFC,ENCFF920FIQ,ENCFF556WOH,ENCFF574AEY" HiSeq 2500 2017-01-27T16:55:08.475822+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25K2F003697q099FYYVYjBB ENCSR903GLL https://www.encodeproject.org/experiments/ENCSR903GLL "histone,histone modification,broad histone mark" H3K27me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF943RGA https://www.encodeproject.org/files/ENCFF943RGA/@@download/ENCFF943RGA.bam ENCFF913ZOF https://www.encodeproject.org/files/ENCFF913ZOF/@@download/ENCFF913ZOF.bam 66.6 M 0 64.9 M 0.974 SE 76 76 native 0.0 M 57.9 M 52.9 M 0.793 0.91 0.92 11.64 220 1.00 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/26972994-59ba-4aab-af66-e14c12d99ab7/@@download/cross_correlation_plot/ENCFF504LCB-ENCFF756OIN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB842YLY bradley-bernstein:DNA_Lib 8184 "ENCFF504LCB,ENCFF756OIN" HiSeq 2500 2016-10-31T13:27:38.459770+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8Yk003698B80B4kPK27Ff ENCSR977CEC https://www.encodeproject.org/experiments/ENCSR977CEC "histone,histone modification,broad histone mark" H3K27me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF048HZR https://www.encodeproject.org/files/ENCFF048HZR/@@download/ENCFF048HZR.bam ENCFF439OBQ https://www.encodeproject.org/files/ENCFF439OBQ/@@download/ENCFF439OBQ.bam 45.9 M 0 44.5 M 0.970 SE 76 None 0.0 M 38.8 M 37.3 M 0.813 0.96 0.97 29.10 220 1.01 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/10817622-cd2f-4ea6-913f-082d3b7bb593/@@download/cross_correlation_plot/ENCFF990SGG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB426EEB bradley-bernstein:DNA_Lib 7550 ENCFF990SGG HiSeq 2500 2016-06-01T18:29:32.157276+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70J30036954yKf8ZF913Pp ENCSR523JCB https://www.encodeproject.org/experiments/ENCSR523JCB "histone,histone modification,broad histone mark" H3K36me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF336SKY https://www.encodeproject.org/files/ENCFF336SKY/@@download/ENCFF336SKY.bam ENCFF624MTI https://www.encodeproject.org/files/ENCFF624MTI/@@download/ENCFF624MTI.bam 33.6 M 0 32.5 M 0.965 SE 76 76 native 0.0 M 27.9 M 27.4 M 0.815 0.98 0.98 67.44 250 1.01 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bb096ff-2aca-4b16-9cb4-e1c02dd36cac/@@download/cross_correlation_plot/ENCFF788WMR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB585JNL bradley-bernstein:DNA_Lib 7584 ENCFF788WMR HiSeq 2500 2016-08-09T16:52:44.963024+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV388036900FyV0Q3P2pGB ENCSR523JCB https://www.encodeproject.org/experiments/ENCSR523JCB "histone,histone modification,broad histone mark" H3K36me3-human body of pancreas tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF530HVT https://www.encodeproject.org/files/ENCFF530HVT/@@download/ENCFF530HVT.bam ENCFF933RMI https://www.encodeproject.org/files/ENCFF933RMI/@@download/ENCFF933RMI.bam 53.3 M 0 51.8 M 0.972 SE 76 76 native 0.0 M 45.4 M 43.7 M 0.820 0.96 0.96 27.86 110 1.00 0.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/43b04222-336b-45d4-a6ae-eb1e7d9edcd1/@@download/cross_correlation_plot/ENCFF967QRY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB614HZS bradley-bernstein:DNA_Lib 7793 ENCFF967QRY HiSeq 2500 2016-08-09T16:53:30.726580+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV3BQ03696BF6v1Q3BGJQZ ENCSR689SFJ https://www.encodeproject.org/experiments/ENCSR689SFJ "histone,histone modification,broad histone mark" H3K36me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF560XUQ https://www.encodeproject.org/files/ENCFF560XUQ/@@download/ENCFF560XUQ.bam ENCFF800NAK https://www.encodeproject.org/files/ENCFF800NAK/@@download/ENCFF800NAK.bam 57.0 M 0 53.5 M 0.939 SE 76 None 0.0 M 46.7 M 43.5 M 0.763 0.93 0.93 15.15 155 1.02 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/9309dd24-a995-473a-9ccc-f1d88af40c6e/@@download/cross_correlation_plot/ENCFF558UXX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB405JXR bradley-bernstein:DNA_Lib 7489 ENCFF558UXX HiSeq 2500 2016-06-01T18:30:59.783033+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70JBQ036954yKf8ZF913QG ENCSR689SFJ https://www.encodeproject.org/experiments/ENCSR689SFJ "histone,histone modification,broad histone mark" H3K36me3-human body of pancreas tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF574SBJ https://www.encodeproject.org/files/ENCFF574SBJ/@@download/ENCFF574SBJ.bam ENCFF889FSG https://www.encodeproject.org/files/ENCFF889FSG/@@download/ENCFF889FSG.bam 63.0 M 0 61.0 M 0.968 SE 76 None 0.0 M 53.9 M 52.4 M 0.831 0.97 0.97 37.90 130 1.00 0.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/86bf9c08-91de-4772-adec-5aa0fd5d2662/@@download/cross_correlation_plot/ENCFF579FUK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB267NCW bradley-bernstein:DNA_Lib 7776 ENCFF579FUK HiSeq 2500 2016-06-01T18:30:14.117454+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70J8003696JVkpKZF9gZX9 ENCSR348TQM https://www.encodeproject.org/experiments/ENCSR348TQM "histone,histone modification,broad histone mark" H3K4me1-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF148AFA https://www.encodeproject.org/files/ENCFF148AFA/@@download/ENCFF148AFA.bam ENCFF296FQT https://www.encodeproject.org/files/ENCFF296FQT/@@download/ENCFF296FQT.bam 97.8 M 0 94.9 M 0.971 SE 76 76 native 0.0 M 85.4 M 77.1 M 0.789 0.90 0.90 10.32 235 1.03 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd96cdc0-17ba-4b59-a29d-4b8633f389f0/@@download/cross_correlation_plot/ENCFF971HUG-ENCFF503UJQ-ENCFF066RTT-ENCFF792VOC-ENCFF240YPN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB743IWD bradley-bernstein:DNA_Lib 7612 "ENCFF066RTT,ENCFF971HUG,ENCFF503UJQ,ENCFF240YPN,ENCFF792VOC" HiSeq 2500 2017-01-27T16:55:52.373007+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25K2vj0369Fj1jXFYqzv0kp ENCSR429XBU https://www.encodeproject.org/experiments/ENCSR429XBU "histone,histone modification,broad histone mark" H3K4me1-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF419IZE https://www.encodeproject.org/files/ENCFF419IZE/@@download/ENCFF419IZE.bam ENCFF296EJL https://www.encodeproject.org/files/ENCFF296EJL/@@download/ENCFF296EJL.bam 53.2 M 0 51.6 M 0.969 SE 76 76 native 0.0 M 46.4 M 43.9 M 0.825 0.95 0.95 19.24 250 1.01 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a4e7ce8-da6d-47c7-a0c2-2a82ae35efbf/@@download/cross_correlation_plot/ENCFF298NKC-ENCFF173MNS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB485ARC bradley-bernstein:DNA_Lib 8181 "ENCFF173MNS,ENCFF298NKC" HiSeq 2500 2016-10-31T13:27:03.976466+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8YGQ0369668063VP6bvP7 ENCSR827NKO https://www.encodeproject.org/experiments/ENCSR827NKO "histone,histone modification,broad histone mark" H3K4me1-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF910YCN https://www.encodeproject.org/files/ENCFF910YCN/@@download/ENCFF910YCN.bam ENCFF639MKF https://www.encodeproject.org/files/ENCFF639MKF/@@download/ENCFF639MKF.bam 46.2 M 0 45.0 M 0.974 SE 76 None 0.0 M 41.0 M 37.7 M 0.816 0.92 0.92 12.42 245 1.03 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3a5735e-bf08-4c10-bd27-9032e90d8fd2/@@download/cross_correlation_plot/ENCFF504ZFV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB928AMF bradley-bernstein:DNA_Lib 7613 ENCFF504ZFV HiSeq 2500 2016-06-01T18:34:58.669894+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70GKQ03697KFfF1k89FK2Z ENCSR827NKO https://www.encodeproject.org/experiments/ENCSR827NKO "histone,histone modification,broad histone mark" H3K4me1-human body of pancreas tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF395SCH https://www.encodeproject.org/files/ENCFF395SCH/@@download/ENCFF395SCH.bam ENCFF121NIY https://www.encodeproject.org/files/ENCFF121NIY/@@download/ENCFF121NIY.bam 54.5 M 0 53.1 M 0.975 SE 76 None 0.0 M 48.4 M 46.8 M 0.858 0.97 0.97 30.85 185 1.03 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/5cdc1e86-0358-4076-8056-0c45283b0f1c/@@download/cross_correlation_plot/ENCFF910OKM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB790VUS bradley-bernstein:DNA_Lib 7794 ENCFF910OKM HiSeq 2500 2016-06-01T18:35:41.932781+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70GV00369Kz1qj0x8FYXxV ENCSR554RQQ https://www.encodeproject.org/experiments/ENCSR554RQQ "histone,histone modification,narrow histone mark" H3K4me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF277POE https://www.encodeproject.org/files/ENCFF277POE/@@download/ENCFF277POE.bam ENCFF219NTY https://www.encodeproject.org/files/ENCFF219NTY/@@download/ENCFF219NTY.bam 39.6 M 0 38.1 M 0.963 SE 76 76 native 0.0 M 32.7 M 32.1 M 0.812 0.98 0.99 67.91 235 1.03 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/44f2e42c-b777-436f-a891-3b1c4efb8691/@@download/cross_correlation_plot/ENCFF798YGR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB629IFL bradley-bernstein:DNA_Lib 7581 ENCFF798YGR HiSeq 2500 2016-08-09T16:52:18.931351+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV6z803696g79pkG2YKkB6 ENCSR554RQQ https://www.encodeproject.org/experiments/ENCSR554RQQ "histone,histone modification,narrow histone mark" H3K4me3-human body of pancreas tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF644OOW https://www.encodeproject.org/files/ENCFF644OOW/@@download/ENCFF644OOW.bam ENCFF012WOA https://www.encodeproject.org/files/ENCFF012WOA/@@download/ENCFF012WOA.bam 22.2 M 0 21.6 M 0.973 SE 76 76 native 0.0 M 19.0 M 18.7 M 0.842 0.98 0.99 76.92 195 1.03 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8130e06-e398-47a4-acae-921962dca0f0/@@download/cross_correlation_plot/ENCFF984FJK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB929UJX bradley-bernstein:DNA_Lib 7792 ENCFF984FJK HiSeq 2500 2016-08-09T16:50:56.864395+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV72803697XQQZkv2f4gYJ ENCSR876DCP https://www.encodeproject.org/experiments/ENCSR876DCP "histone,histone modification,narrow histone mark" H3K4me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF216KYG https://www.encodeproject.org/files/ENCFF216KYG/@@download/ENCFF216KYG.bam ENCFF686BVI https://www.encodeproject.org/files/ENCFF686BVI/@@download/ENCFF686BVI.bam 33.2 M 0 32.3 M 0.972 SE 76 None 0.0 M 28.4 M 26.6 M 0.801 0.94 0.94 16.68 215 1.03 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d39489b-b9ef-4def-882c-63d8bdc28998/@@download/cross_correlation_plot/ENCFF575NUE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB719YEC bradley-bernstein:DNA_Lib 7444 ENCFF575NUE HiSeq 2500 2016-06-01T18:33:08.889517+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70Gjj03694vggpq17XJf69 ENCSR876DCP https://www.encodeproject.org/experiments/ENCSR876DCP "histone,histone modification,narrow histone mark" H3K4me3-human body of pancreas tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF690MQF https://www.encodeproject.org/files/ENCFF690MQF/@@download/ENCFF690MQF.bam ENCFF768QOJ https://www.encodeproject.org/files/ENCFF768QOJ/@@download/ENCFF768QOJ.bam 31.4 M 0 30.4 M 0.968 SE 76 None 0.0 M 26.8 M 26.2 M 0.836 0.98 0.98 53.80 240 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad4035b4-edc7-45d0-86a6-4edad4e5f992/@@download/cross_correlation_plot/ENCFF857KJS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB001WXF bradley-bernstein:DNA_Lib 7774 ENCFF857KJS HiSeq 2500 2016-06-01T18:32:12.910678+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70Gq00369Bz5kjvk7b0J77 ENCSR719COF https://www.encodeproject.org/experiments/ENCSR719COF "histone,histone modification,broad histone mark" H3K9me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF432AVD https://www.encodeproject.org/files/ENCFF432AVD/@@download/ENCFF432AVD.bam ENCFF500FYK https://www.encodeproject.org/files/ENCFF500FYK/@@download/ENCFF500FYK.bam 53.2 M 0 51.8 M 0.973 SE 76 76 native 0.0 M 45.9 M 44.0 M 0.827 0.96 0.96 27.66 190 1.00 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/a151a30a-1d3b-4e90-82c9-7fec77413777/@@download/cross_correlation_plot/ENCFF956TXW-ENCFF878EFY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB684KTL bradley-bernstein:DNA_Lib 8188 "ENCFF878EFY,ENCFF956TXW" HiSeq 2500 2016-10-31T13:27:14.307298+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8YV8036913377YJjkvgJ0 ENCSR760EGQ https://www.encodeproject.org/experiments/ENCSR760EGQ "histone,histone modification,broad histone mark" H3K9me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF102JRX https://www.encodeproject.org/files/ENCFF102JRX/@@download/ENCFF102JRX.bam ENCFF999JSY https://www.encodeproject.org/files/ENCFF999JSY/@@download/ENCFF999JSY.bam 74.2 M 0 70.3 M 0.948 SE 76 76 native 0.0 M 58.9 M 55.9 M 0.754 0.95 0.95 21.43 250 1.01 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e56c6cd-b9d4-4562-84f5-dbffb20c04f3/@@download/cross_correlation_plot/ENCFF525RST-ENCFF837IGE-ENCFF831CFS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB626JOC bradley-bernstein:DNA_Lib 7549 "ENCFF831CFS,ENCFF525RST,ENCFF837IGE" HiSeq 2500 2016-10-27T22:27:03.534670+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F093y200369PK6yVbxF5BBJv ENCSR760EGQ https://www.encodeproject.org/experiments/ENCSR760EGQ "histone,histone modification,broad histone mark" H3K9me3-human body of pancreas tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF711KNE https://www.encodeproject.org/files/ENCFF711KNE/@@download/ENCFF711KNE.bam ENCFF280SGH https://www.encodeproject.org/files/ENCFF280SGH/@@download/ENCFF280SGH.bam 52.4 M 0 50.5 M 0.963 SE 76 76 native 0.0 M 43.2 M 41.6 M 0.794 0.96 0.97 30.95 100 1.00 0.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/9796140b-09e8-486f-9db9-a67cfc2b4876/@@download/cross_correlation_plot/ENCFF920QIL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB176JHX bradley-bernstein:DNA_Lib 7789 ENCFF920QIL HiSeq 2500 2016-10-27T22:25:45.707500+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F093y5803694qqQFPkF02J4j ENCSR863TAL https://www.encodeproject.org/experiments/ENCSR863TAL "histone,histone modification,broad histone mark" H3K9me3-human body of pancreas tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF482HDN https://www.encodeproject.org/files/ENCFF482HDN/@@download/ENCFF482HDN.bam ENCFF517UMD https://www.encodeproject.org/files/ENCFF517UMD/@@download/ENCFF517UMD.bam 89.8 M 0 85.3 M 0.949 SE 76 76 native 0.0 M 68.0 M 65.5 M 0.729 0.96 0.97 33.82 245 1.01 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e3a7e5d-e9ea-49ad-a8f7-1a7f4b2f0127/@@download/cross_correlation_plot/ENCFF560OIV-ENCFF063MOP-ENCFF054KUT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB519VLC bradley-bernstein:DNA_Lib 7585 "ENCFF054KUT,ENCFF560OIV,ENCFF063MOP" HiSeq 2500 2017-01-27T16:53:09.192962+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25K16j03697q099FYYVYjB1 ENCSR247XFQ https://www.encodeproject.org/experiments/ENCSR247XFQ control Control-human breast epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF636AYA https://www.encodeproject.org/files/ENCFF636AYA/@@download/ENCFF636AYA.bam ENCFF512VDU https://www.encodeproject.org/files/ENCFF512VDU/@@download/ENCFF512VDU.bam 51.3 M 0 49.8 M 0.971 SE 76 76 native 0.0 M 44.4 M 43.1 M 0.841 0.97 0.98 43.09 105 1.00 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/741cd131-46ce-450a-895f-daf6ee60c099/@@download/cross_correlation_plot/ENCFF148HHK-ENCFF245VNV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB612VTX bradley-bernstein:DNA_Lib 8233 "ENCFF148HHK,ENCFF245VNV" HiSeq 2500 2016-10-27T22:02:46.137385+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Vbj03693F6GvgxF249j0 ENCSR034ZKE https://www.encodeproject.org/experiments/ENCSR034ZKE "histone,histone modification,narrow histone mark" H3K27ac-human breast epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF422CZO https://www.encodeproject.org/files/ENCFF422CZO/@@download/ENCFF422CZO.bam ENCFF361PFU https://www.encodeproject.org/files/ENCFF361PFU/@@download/ENCFF361PFU.bam 40.7 M 0 38.4 M 0.942 SE 76 76 native 0.0 M 35.9 M 31.8 M 0.781 0.89 0.89 9.59 190 1.35 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5634f83-4443-4011-aa2e-195dade37c05/@@download/cross_correlation_plot/ENCFF737ZSN-ENCFF697YTU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB987VXJ bradley-bernstein:DNA_Lib 8156 "ENCFF697YTU,ENCFF737ZSN" HiSeq 2500 2016-10-31T13:24:07.788275+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8g2j03692404175P5YvfV ENCSR770WSE https://www.encodeproject.org/experiments/ENCSR770WSE "histone,histone modification,broad histone mark" H3K27me3-human breast epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF114URN https://www.encodeproject.org/files/ENCFF114URN/@@download/ENCFF114URN.bam ENCFF115VTO https://www.encodeproject.org/files/ENCFF115VTO/@@download/ENCFF115VTO.bam 109.5 M 0 105.7 M 0.965 SE 76 76 native 0.0 M 93.3 M 80.2 M 0.732 0.86 0.86 6.85 210 1.00 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad33b87d-d3bb-48c7-b5e5-aade63679af7/@@download/cross_correlation_plot/ENCFF141YPR-ENCFF178NFV-ENCFF942XTX-ENCFF229RRR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB045LGY bradley-bernstein:DNA_Lib 8285 "ENCFF178NFV,ENCFF229RRR,ENCFF942XTX,ENCFF141YPR" HiSeq 2500 2017-01-25T08:46:44.444489+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2413Qj03693K5xJ8f7yzx0f ENCSR543YQF https://www.encodeproject.org/experiments/ENCSR543YQF "histone,histone modification,broad histone mark" H3K36me3-human breast epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF660ICV https://www.encodeproject.org/files/ENCFF660ICV/@@download/ENCFF660ICV.bam ENCFF707GDZ https://www.encodeproject.org/files/ENCFF707GDZ/@@download/ENCFF707GDZ.bam 52.0 M 0 50.5 M 0.972 SE 76 76 native 0.0 M 45.0 M 43.7 M 0.841 0.97 0.97 36.61 200 1.01 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/f00d1b51-fff6-4b91-8baf-10fbc576360a/@@download/cross_correlation_plot/ENCFF785BJK-ENCFF711NWB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB259KXY bradley-bernstein:DNA_Lib 8286 "ENCFF785BJK,ENCFF711NWB" HiSeq 2500 2016-10-31T13:24:23.056353+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8fbj0369Bj2bF0JP9K9p3 ENCSR553IAW https://www.encodeproject.org/experiments/ENCSR553IAW "histone,histone modification,broad histone mark" H3K4me1-human breast epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF849QCZ https://www.encodeproject.org/files/ENCFF849QCZ/@@download/ENCFF849QCZ.bam ENCFF488INW https://www.encodeproject.org/files/ENCFF488INW/@@download/ENCFF488INW.bam 60.1 M 0 58.1 M 0.968 SE 76 76 native 0.0 M 52.0 M 49.0 M 0.817 0.94 0.94 17.87 250 1.01 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e17a3c7-b96e-4f41-875d-57bcd4b4ec46/@@download/cross_correlation_plot/ENCFF829YMA-ENCFF364VWJ-ENCFF514SBQ-ENCFF054NVS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB358SFF bradley-bernstein:DNA_Lib 8180 "ENCFF829YMA,ENCFF364VWJ,ENCFF054NVS,ENCFF514SBQ" HiSeq 2500 2016-10-31T13:24:45.100266+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8fyj0369P876f29P7QZz4 ENCSR416AUW https://www.encodeproject.org/experiments/ENCSR416AUW "histone,histone modification,narrow histone mark" H3K4me3-human breast epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF332TQJ https://www.encodeproject.org/files/ENCFF332TQJ/@@download/ENCFF332TQJ.bam ENCFF500UUR https://www.encodeproject.org/files/ENCFF500UUR/@@download/ENCFF500UUR.bam 32.6 M 0 31.7 M 0.970 SE 76 76 native 0.0 M 28.7 M 25.8 M 0.791 0.90 0.91 11.05 225 1.60 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/254b844e-c746-4970-84fe-fe60577f335a/@@download/cross_correlation_plot/ENCFF914KZW-ENCFF035YEZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB837ISF bradley-bernstein:DNA_Lib 8198 "ENCFF914KZW,ENCFF035YEZ" HiSeq 2500 2016-10-31T13:21:23.664795+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8v4Q0369BgF5f15PFG8b1 ENCSR416AUW https://www.encodeproject.org/experiments/ENCSR416AUW "histone,histone modification,narrow histone mark" H3K4me3-human breast epithelium tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF246OTC https://www.encodeproject.org/files/ENCFF246OTC/@@download/ENCFF246OTC.bam ENCFF780VAU https://www.encodeproject.org/files/ENCFF780VAU/@@download/ENCFF780VAU.bam 48.6 M 0 43.6 M 0.898 SE 76 76 native 0.0 M 39.2 M 28.6 M 0.589 0.73 0.73 3.73 190 1.71 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa9c6e77-a78f-4f30-9abf-b0abb1bca6a9/@@download/cross_correlation_plot/ENCFF462KFA-ENCFF293WGK-ENCFF844UHL-ENCFF382SJK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB744YZD bradley-bernstein:DNA_Lib 8155 "ENCFF293WGK,ENCFF844UHL,ENCFF382SJK,ENCFF462KFA" HiSeq 2500 2016-10-31T13:19:59.963230+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8v8Q0369BX1xqb1B81Pg0 ENCSR403UOU https://www.encodeproject.org/experiments/ENCSR403UOU "histone,histone modification,broad histone mark" H3K9me3-human breast epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF508FFS https://www.encodeproject.org/files/ENCFF508FFS/@@download/ENCFF508FFS.bam ENCFF260IJQ https://www.encodeproject.org/files/ENCFF260IJQ/@@download/ENCFF260IJQ.bam 55.1 M 0 52.2 M 0.947 SE 76 76 native 0.0 M 42.6 M 40.7 M 0.738 0.96 0.96 24.34 90 1.01 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b6ade7f-6c7d-4cea-aca6-a1867d9a3abe/@@download/cross_correlation_plot/ENCFF289ABY-ENCFF479GWU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB506APO bradley-bernstein:DNA_Lib 8287 "ENCFF479GWU,ENCFF289ABY" HiSeq 2500 2016-10-31T13:24:01.265716+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8fp00369JYX7855VG0Z28 ENCSR867SJE https://www.encodeproject.org/experiments/ENCSR867SJE control Control-human cardiac muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF759XSW https://www.encodeproject.org/files/ENCFF759XSW/@@download/ENCFF759XSW.bam ENCFF528RAC https://www.encodeproject.org/files/ENCFF528RAC/@@download/ENCFF528RAC.bam 57.0 M 0 54.9 M 0.963 SE 76 76 native 0.0 M 49.2 M 47.9 M 0.840 0.98 0.98 52.28 220 1.00 0.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/679e9979-81e8-4c4d-9f87-59105bf1fb2d/@@download/cross_correlation_plot/ENCFF342XML-ENCFF115PHM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB583PWG bradley-bernstein:DNA_Lib 8030 "ENCFF342XML,ENCFF115PHM" HiSeq 2500 2016-10-27T22:00:44.541514+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Y5j03694qqQFPkF02FgG ENCSR867SJE https://www.encodeproject.org/experiments/ENCSR867SJE control Control-human cardiac muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF120GPO https://www.encodeproject.org/files/ENCFF120GPO/@@download/ENCFF120GPO.bam ENCFF326MZA https://www.encodeproject.org/files/ENCFF326MZA/@@download/ENCFF326MZA.bam 52.2 M 0 49.7 M 0.952 SE 76 76 native 0.0 M 44.2 M 42.8 M 0.820 0.97 0.98 42.85 205 1.01 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/07baaa57-89fd-4ef3-941d-d63b4972dba6/@@download/cross_correlation_plot/ENCFF564EJZ-ENCFF064RAZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB142HEK bradley-bernstein:DNA_Lib 8101 "ENCFF064RAZ,ENCFF564EJZ" HiSeq 2500 2016-10-27T21:59:45.008031+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Y9003692g2Q4k5K0jq6k ENCSR000NPF https://www.encodeproject.org/experiments/ENCSR000NPF "histone,histone modification,narrow histone mark" H3K27ac-human cardiac muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF974ARO https://www.encodeproject.org/files/ENCFF974ARO/@@download/ENCFF974ARO.bam ENCFF997RPD https://www.encodeproject.org/files/ENCFF997RPD/@@download/ENCFF997RPD.bam 41.2 M 0 39.8 M 0.968 SE 76 76 native 0.0 M 36.5 M 35.1 M 0.852 0.96 0.96 26.42 200 1.10 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bd4b1d0-9da0-45da-968d-8c84a54b9f8e/@@download/cross_correlation_plot/ENCFF766VGS-ENCFF232TCS-ENCFF143SXY-ENCFF236ZHP_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB528QAP bradley-bernstein:DNA_Lib 8042 "ENCFF143SXY,ENCFF232TCS,ENCFF766VGS,ENCFF236ZHP" HiSeq 2500 2016-11-16T20:09:35.788174+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bYPB003699PK8zfkzkG2Zb ENCSR000NPF https://www.encodeproject.org/experiments/ENCSR000NPF "histone,histone modification,narrow histone mark" H3K27ac-human cardiac muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF324SDG https://www.encodeproject.org/files/ENCFF324SDG/@@download/ENCFF324SDG.bam ENCFF601FNZ https://www.encodeproject.org/files/ENCFF601FNZ/@@download/ENCFF601FNZ.bam 64.2 M 0 61.4 M 0.956 SE 76 76 native 0.0 M 56.3 M 51.3 M 0.799 0.91 0.92 11.96 185 1.09 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/c40dbf5d-e2e5-4f3e-959a-9748976409df/@@download/cross_correlation_plot/ENCFF478OZK-ENCFF340KQN-ENCFF366LCI-ENCFF299TZK-ENCFF577YKS-ENCFF402UQN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB165PXM bradley-bernstein:DNA_Lib 8096 "ENCFF299TZK,ENCFF402UQN,ENCFF478OZK,ENCFF577YKS,ENCFF366LCI,ENCFF340KQN" HiSeq 2500 2016-11-04T20:55:22.259446+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KB92803697fBQV5G4z86Z2 ENCSR864LRY https://www.encodeproject.org/experiments/ENCSR864LRY "histone,histone modification,broad histone mark" H3K27me3-human cardiac muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF083APJ https://www.encodeproject.org/files/ENCFF083APJ/@@download/ENCFF083APJ.bam ENCFF659MBE https://www.encodeproject.org/files/ENCFF659MBE/@@download/ENCFF659MBE.bam 74.0 M 0 71.6 M 0.968 SE 76 76 native 0.0 M 64.5 M 58.7 M 0.793 0.91 0.91 11.11 160 1.02 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/43e1087e-5c34-41f5-ae3f-822921235f49/@@download/cross_correlation_plot/ENCFF562HAT-ENCFF667KFU-ENCFF138BHG-ENCFF773MOC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB661XGX bradley-bernstein:DNA_Lib 8095 "ENCFF667KFU,ENCFF138BHG,ENCFF562HAT,ENCFF773MOC" HiSeq 2500 2016-10-31T13:22:32.660315+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8q3803692404175P5YvjB ENCSR864LRY https://www.encodeproject.org/experiments/ENCSR864LRY "histone,histone modification,broad histone mark" H3K27me3-human cardiac muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF407XPY https://www.encodeproject.org/files/ENCFF407XPY/@@download/ENCFF407XPY.bam ENCFF094JOV https://www.encodeproject.org/files/ENCFF094JOV/@@download/ENCFF094JOV.bam 64.0 M 0 61.3 M 0.958 SE 76 76 native 0.0 M 54.7 M 50.9 M 0.795 0.93 0.93 15.22 180 1.01 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/eea831f1-b095-49a3-bf76-caed07d7e05f/@@download/cross_correlation_plot/ENCFF944DOY-ENCFF720MIH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB519DJQ bradley-bernstein:DNA_Lib 8348 "ENCFF944DOY,ENCFF720MIH" HiSeq 2500 2017-01-25T22:03:52.249829+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KY7803693K5xJ8f7z00Vp ENCSR994NPK https://www.encodeproject.org/experiments/ENCSR994NPK "histone,histone modification,broad histone mark" H3K36me3-human cardiac muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF496JOF https://www.encodeproject.org/files/ENCFF496JOF/@@download/ENCFF496JOF.bam ENCFF081MWX https://www.encodeproject.org/files/ENCFF081MWX/@@download/ENCFF081MWX.bam 69.9 M 0 67.8 M 0.969 SE 76 76 native 0.0 M 61.0 M 56.6 M 0.810 0.93 0.93 14.36 210 1.01 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/7dc61279-b287-4efb-91cc-0660371f4fbd/@@download/cross_correlation_plot/ENCFF122ZOD-ENCFF980KDT-ENCFF943XDD-ENCFF805YSD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB481SFE bradley-bernstein:DNA_Lib 8097 "ENCFF122ZOD,ENCFF805YSD,ENCFF980KDT,ENCFF943XDD" HiSeq 2500 2016-11-04T20:56:56.046357+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KB7Gj03696gP4JvV8667f6 ENCSR994NPK https://www.encodeproject.org/experiments/ENCSR994NPK "histone,histone modification,broad histone mark" H3K36me3-human cardiac muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF721WXU https://www.encodeproject.org/files/ENCFF721WXU/@@download/ENCFF721WXU.bam ENCFF911WRX https://www.encodeproject.org/files/ENCFF911WRX/@@download/ENCFF911WRX.bam 89.2 M 0 81.6 M 0.914 SE 76 76 native 0.0 M 72.3 M 67.4 M 0.756 0.93 0.94 15.80 220 1.00 0.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/d041b84e-9704-4756-9cf8-48213b173e1c/@@download/cross_correlation_plot/ENCFF290IRP-ENCFF170DJA-ENCFF994FCP-ENCFF710OUJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB862KDH,ENCLB376NHI" "bradley-bernstein:DNA_Lib 8043,bradley-bernstein:DNA_Lib 8193" "ENCFF994FCP,ENCFF170DJA,ENCFF710OUJ,ENCFF290IRP" HiSeq 2500 2016-11-04T20:58:29.413676+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KB8bj03698QgyJ0G4Xjk3f ENCSR276OLB https://www.encodeproject.org/experiments/ENCSR276OLB "histone,histone modification,broad histone mark" H3K4me1-human cardiac muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF452DPU https://www.encodeproject.org/files/ENCFF452DPU/@@download/ENCFF452DPU.bam ENCFF814SLQ https://www.encodeproject.org/files/ENCFF814SLQ/@@download/ENCFF814SLQ.bam 96.1 M 0 90.9 M 0.946 SE 76 76 native 0.0 M 82.9 M 74.2 M 0.772 0.90 0.90 9.49 215 1.02 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/960484c4-a3c6-42ee-90f8-715e514c5183/@@download/cross_correlation_plot/ENCFF825YRT-ENCFF943GKJ-ENCFF928UVS-ENCFF664TIA-ENCFF884AZS-ENCFF024XLI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB871ZTL bradley-bernstein:DNA_Lib 8093 "ENCFF928UVS,ENCFF825YRT,ENCFF884AZS,ENCFF664TIA,ENCFF943GKJ,ENCFF024XLI" HiSeq 2500 2016-11-04T05:04:01.926623+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Jjg50036907XyKjbqJg9G1 ENCSR276OLB https://www.encodeproject.org/experiments/ENCSR276OLB "histone,histone modification,broad histone mark" H3K4me1-human cardiac muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF271DHX https://www.encodeproject.org/files/ENCFF271DHX/@@download/ENCFF271DHX.bam ENCFF235FUU https://www.encodeproject.org/files/ENCFF235FUU/@@download/ENCFF235FUU.bam 50.5 M 0 49.0 M 0.971 SE 76 76 native 0.0 M 44.5 M 41.2 M 0.817 0.93 0.93 13.74 200 1.01 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/4fb059e5-18d0-4136-be43-5d3a7ca1a850/@@download/cross_correlation_plot/ENCFF109CIF-ENCFF784FGJ-ENCFF744FRZ-ENCFF738LVV-ENCFF002NBE-ENCFF078OYE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB292OOJ bradley-bernstein:DNA_Lib 8037 "ENCFF002NBE,ENCFF784FGJ,ENCFF078OYE,ENCFF109CIF,ENCFF744FRZ,ENCFF738LVV" HiSeq 2500 2016-11-04T05:02:17.966576+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JjgfQ03696ZqxyXxbxfgQb ENCSR652QNW https://www.encodeproject.org/experiments/ENCSR652QNW "histone,histone modification,narrow histone mark" H3K4me3-human cardiac muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF018WWY https://www.encodeproject.org/files/ENCFF018WWY/@@download/ENCFF018WWY.bam ENCFF188VXH https://www.encodeproject.org/files/ENCFF188VXH/@@download/ENCFF188VXH.bam 59.0 M 0 56.8 M 0.962 SE 76 76 native 0.0 M 50.8 M 49.1 M 0.833 0.97 0.97 34.54 195 1.02 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/970187c5-6a4d-41fa-bb8b-5ec1c9092bd1/@@download/cross_correlation_plot/ENCFF989CNP-ENCFF430BVZ-ENCFF712AIJ-ENCFF055SGG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB932FMT bradley-bernstein:DNA_Lib 8038 "ENCFF055SGG,ENCFF712AIJ,ENCFF989CNP,ENCFF430BVZ" HiSeq 2500 2016-10-31T13:20:44.968410+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8y000369668063VP6bvb2 ENCSR652QNW https://www.encodeproject.org/experiments/ENCSR652QNW "histone,histone modification,narrow histone mark" H3K4me3-human cardiac muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF959PBV https://www.encodeproject.org/files/ENCFF959PBV/@@download/ENCFF959PBV.bam ENCFF724PZN https://www.encodeproject.org/files/ENCFF724PZN/@@download/ENCFF724PZN.bam 45.3 M 0 43.1 M 0.951 SE 76 76 native 0.0 M 39.4 M 35.0 M 0.772 0.89 0.90 10.78 215 1.55 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/2146159c-ccba-40d9-8bd5-dbb693536dd0/@@download/cross_correlation_plot/ENCFF161RBU-ENCFF136HNS-ENCFF881COR-ENCFF204HFJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB137JEQ bradley-bernstein:DNA_Lib 8094 "ENCFF881COR,ENCFF161RBU,ENCFF204HFJ,ENCFF136HNS" HiSeq 2500 2016-10-31T13:15:15.747686+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8y4Q0369GJ6xQfbB7FjKP ENCSR269ULZ https://www.encodeproject.org/experiments/ENCSR269ULZ "histone,histone modification,broad histone mark" H3K9me3-human cardiac muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF610HGH https://www.encodeproject.org/files/ENCFF610HGH/@@download/ENCFF610HGH.bam ENCFF747DMZ https://www.encodeproject.org/files/ENCFF747DMZ/@@download/ENCFF747DMZ.bam 114.1 M 0 104.0 M 0.911 SE 76 76 native 0.0 M 86.9 M 74.5 M 0.653 0.86 0.86 7.12 200 1.01 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7ba2543-621f-4953-8a0a-71fb230ee927/@@download/cross_correlation_plot/ENCFF283EZV-ENCFF690DRJ-ENCFF132HTY-ENCFF829QFD-ENCFF224LPA-ENCFF998CYX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB789WSZ bradley-bernstein:DNA_Lib 8099 "ENCFF829QFD,ENCFF283EZV,ENCFF132HTY,ENCFF224LPA,ENCFF998CYX,ENCFF690DRJ" HiSeq 2500 2016-11-04T20:58:16.499859+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JppV803690ZP2yPkbXggx5 ENCSR269ULZ https://www.encodeproject.org/experiments/ENCSR269ULZ "histone,histone modification,broad histone mark" H3K9me3-human cardiac muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF491RGW https://www.encodeproject.org/files/ENCFF491RGW/@@download/ENCFF491RGW.bam ENCFF939XUT https://www.encodeproject.org/files/ENCFF939XUT/@@download/ENCFF939XUT.bam 41.7 M 0 40.5 M 0.971 SE 76 76 native 0.0 M 35.4 M 31.6 M 0.758 0.89 0.89 9.23 190 1.01 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/63e3766a-3282-4039-9105-6e759ea812a3/@@download/cross_correlation_plot/ENCFF241ADN-ENCFF324OLL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB940GTB bradley-bernstein:DNA_Lib 8192 "ENCFF241ADN,ENCFF324OLL" HiSeq 2500 2016-11-04T04:55:57.455772+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JppbQ036949JVzZVbpb7Fj ENCSR000AUU https://www.encodeproject.org/experiments/ENCSR000AUU control Control-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF075YNC https://www.encodeproject.org/files/ENCFF075YNC/@@download/ENCFF075YNC.bam ENCFF545JWL https://www.encodeproject.org/files/ENCFF545JWL/@@download/ENCFF545JWL.bam 46.1 M 0 41.5 M 0.901 SE 36 36 None 0.0 M 30.9 M 28.1 M 0.611 0.92 0.92 12.15 155 1.01 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d7083e9-580e-4939-bea7-a2addc63c79e/@@download/cross_correlation_plot/ENCFF000CCW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQA bradley-bernstein:DNA_Lib 804 ENCFF000CCW HiSeq 2000 2016-07-13T02:53:18.101364+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z5jj03691y3B9QkZQBYFb ENCSR000AUU https://www.encodeproject.org/experiments/ENCSR000AUU control Control-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF865NTT https://www.encodeproject.org/files/ENCFF865NTT/@@download/ENCFF865NTT.bam ENCFF383QCX https://www.encodeproject.org/files/ENCFF383QCX/@@download/ENCFF383QCX.bam 12.5 M 0 11.8 M 0.944 SE 36 36 None 0.0 M 8.8 M 8.7 M 0.698 0.99 0.99 91.73 135 1.01 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f65410a-0778-4db5-88c6-4dec2a9275b0/@@download/cross_correlation_plot/ENCFF000CCQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQB bradley-bernstein:DNA_Lib 802 ENCFF000CCQ HiSeq 2000 2016-07-13T02:50:09.036167+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z5q803693JvxGJJZb0P2x ENCSR000AUU https://www.encodeproject.org/experiments/ENCSR000AUU control Control-human CD14-positive monocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF894MBE https://www.encodeproject.org/files/ENCFF894MBE/@@download/ENCFF894MBE.bam ENCFF172HPC https://www.encodeproject.org/files/ENCFF172HPC/@@download/ENCFF172HPC.bam 52.0 M 0 50.2 M 0.966 SE 36 36 native 0.0 M 37.7 M 36.2 M 0.696 0.96 0.96 28.59 190 1.01 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/70ebf97d-e355-43b8-94de-afea1e0055d4/@@download/cross_correlation_plot/ENCFF244XQF-ENCFF692GVG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB389GXJ bradley-bernstein:DNA_Lib 2061 "ENCFF244XQF,ENCFF692GVG" HiSeq 2000 2017-04-12T02:56:00.822265+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3fg3400369K2pGGPxk95f6X ENCSR000ATN https://www.encodeproject.org/experiments/ENCSR000ATN "transcription factor,RNA binding protein" CTCF-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF746KIU https://www.encodeproject.org/files/ENCFF746KIU/@@download/ENCFF746KIU.bam ENCFF210URG https://www.encodeproject.org/files/ENCFF210URG/@@download/ENCFF210URG.bam 21.7 M 0 14.6 M 0.672 SE 36 36 native 0.0 M 10.9 M 5.8 M 0.270 0.59 0.59 2.45 170 1.70 2.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ba1482d-9298-44ea-ad9f-74c25874a4cd/@@download/cross_correlation_plot/ENCFF000CCY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAA ENCFF000CCY HiSeq 2000 2016-12-10T17:30:34.516820+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162B3003697K4B1J71pxzQJ ENCSR000ATN https://www.encodeproject.org/experiments/ENCSR000ATN "transcription factor,RNA binding protein" CTCF-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF765PTU https://www.encodeproject.org/files/ENCFF765PTU/@@download/ENCFF765PTU.bam ENCFF977ATV https://www.encodeproject.org/files/ENCFF977ATV/@@download/ENCFF977ATV.bam 39.0 M 0 35.8 M 0.918 SE 36 36 native 0.0 M 28.3 M 17.6 M 0.451 0.65 0.64 2.71 235 2.22 2.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/9817bd79-70c7-4dab-94de-e72c35a2c6b9/@@download/cross_correlation_plot/ENCFF000CCZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACF ENCFF000CCZ HiSeq 2000 2016-12-10T19:01:04.514944+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162B7Q0369BgG8x1ygv1VxF ENCSR000ASI https://www.encodeproject.org/experiments/ENCSR000ASI "histone,histone modification,narrow histone mark" H2AFZ-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF843FKD https://www.encodeproject.org/files/ENCFF843FKD/@@download/ENCFF843FKD.bam ENCFF649IXB https://www.encodeproject.org/files/ENCFF649IXB/@@download/ENCFF649IXB.bam 21.6 M 0 19.5 M 0.903 SE 36 36 native 0.0 M 15.9 M 14.0 M 0.648 0.88 0.88 8.27 210 1.26 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/10f4967e-93a3-416a-a901-4f1b22be9718/@@download/cross_correlation_plot/ENCFF000CDE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWR bradley-bernstein:DNA_Lib 685 ENCFF000CDE Illumina Genome Analyzer 2016-11-07T03:16:09.606452+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJjY0036911ffQk1b9pX99 ENCSR000ASI https://www.encodeproject.org/experiments/ENCSR000ASI "histone,histone modification,narrow histone mark" H2AFZ-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF800CRL https://www.encodeproject.org/files/ENCFF800CRL/@@download/ENCFF800CRL.bam ENCFF869GNS https://www.encodeproject.org/files/ENCFF869GNS/@@download/ENCFF869GNS.bam 22.2 M 0 22.1 M 0.993 SE 36 36 native 0.0 M 18.0 M 4.8 M 0.217 0.28 0.22 1.26 260 1.24 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/728f49ac-8239-4c44-8786-376bd2d30a06/@@download/cross_correlation_plot/ENCFF000CDF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWS bradley-bernstein:DNA_Lib 493 ENCFF000CDF Illumina Genome Analyzer 2016-11-07T03:16:04.823069+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJjjQ03697GFbjV1b4gVk9 ENCSR000ASJ https://www.encodeproject.org/experiments/ENCSR000ASJ "histone,histone modification,narrow histone mark" H3K27ac-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF835ZFV https://www.encodeproject.org/files/ENCFF835ZFV/@@download/ENCFF835ZFV.bam ENCFF760YJS https://www.encodeproject.org/files/ENCFF760YJS/@@download/ENCFF760YJS.bam 23.3 M 0 23.0 M 0.987 SE 36 None 0.0 M 19.2 M 17.5 M 0.752 0.92 0.92 12.02 260 1.30 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd9f7464-ac16-474c-a741-f4facc3d8751/@@download/cross_correlation_plot/ENCFF000CEN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACJ bradley-bernstein:DNA_Lib 477 ENCFF000CEN Illumina Genome Analyzer 2016-07-13T02:52:37.126517+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z5X803693JvxGJJZb0P26 ENCSR000ASJ https://www.encodeproject.org/experiments/ENCSR000ASJ "histone,histone modification,narrow histone mark" H3K27ac-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF329AXT https://www.encodeproject.org/files/ENCFF329AXT/@@download/ENCFF329AXT.bam ENCFF356TSV https://www.encodeproject.org/files/ENCFF356TSV/@@download/ENCFF356TSV.bam 20.1 M 0 19.9 M 0.990 SE 36 None 0.0 M 16.7 M 15.9 M 0.790 0.96 0.96 23.70 230 1.40 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/909ab3de-57de-4830-b3e2-9fb53cbd766f/@@download/cross_correlation_plot/ENCFF000CEO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACK bradley-bernstein:DNA_Lib 472 ENCFF000CEO Illumina Genome Analyzer 2016-07-13T02:52:23.891606+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z5Zj03693JvxGJJZb0P2Y ENCSR000ASK https://www.encodeproject.org/experiments/ENCSR000ASK "histone,histone modification,broad histone mark" H3K27me3-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF760LLG https://www.encodeproject.org/files/ENCFF760LLG/@@download/ENCFF760LLG.bam ENCFF801WPN https://www.encodeproject.org/files/ENCFF801WPN/@@download/ENCFF801WPN.bam 28.8 M 0 27.9 M 0.970 SE 36 36 native 0.0 M 22.8 M 18.5 M 0.643 0.82 0.82 5.32 185 1.08 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/2756de3f-09ca-4e45-98c1-d177c84447a4/@@download/cross_correlation_plot/ENCFF000CEV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695API bradley-bernstein:DNA_Lib 683 ENCFF000CEV Illumina Genome Analyzer 2016-11-07T03:15:25.353561+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJxPj0369B7X2vz98168JB ENCSR000ASK https://www.encodeproject.org/experiments/ENCSR000ASK "histone,histone modification,broad histone mark" H3K27me3-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF619JPI https://www.encodeproject.org/files/ENCFF619JPI/@@download/ENCFF619JPI.bam ENCFF285JTY https://www.encodeproject.org/files/ENCFF285JTY/@@download/ENCFF285JTY.bam 24.2 M 0 24.1 M 0.995 SE 36 36 native 0.0 M 19.6 M 7.1 M 0.294 0.38 0.33 1.42 280 1.10 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/e354bc4e-8d78-4094-821d-7e93f96b43b3/@@download/cross_correlation_plot/ENCFF000CEU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APJ bradley-bernstein:DNA_Lib 490 ENCFF000CEU Illumina Genome Analyzer 2016-11-07T03:14:56.308917+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJxb803697bbG5kk8621jk ENCSR000ASL https://www.encodeproject.org/experiments/ENCSR000ASL "histone,histone modification,broad histone mark" H3K36me3-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF466TKD https://www.encodeproject.org/files/ENCFF466TKD/@@download/ENCFF466TKD.bam ENCFF718ZMT https://www.encodeproject.org/files/ENCFF718ZMT/@@download/ENCFF718ZMT.bam 21.9 M 0 21.5 M 0.983 SE 36 36 native 0.0 M 16.7 M 14.8 M 0.678 0.89 0.89 9.10 245 1.06 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a968979-9fff-487e-8117-b6e1f28d3056/@@download/cross_correlation_plot/ENCFF000CFA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADJ bradley-bernstein:DNA_Lib 478 ENCFF000CFA Illumina Genome Analyzer 2016-11-07T03:12:59.758988+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJyp80369B7X2vz98168K8 ENCSR000ASL https://www.encodeproject.org/experiments/ENCSR000ASL "histone,histone modification,broad histone mark" H3K36me3-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF704VKY https://www.encodeproject.org/files/ENCFF704VKY/@@download/ENCFF704VKY.bam ENCFF369SOG https://www.encodeproject.org/files/ENCFF369SOG/@@download/ENCFF369SOG.bam 25.8 M 0 25.5 M 0.989 SE 36 36 native 0.0 M 19.3 M 17.6 M 0.680 0.91 0.91 11.27 230 1.06 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/82ee10a9-7613-484d-8bf3-a5449a72bc82/@@download/cross_correlation_plot/ENCFF000CFB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADI bradley-bernstein:DNA_Lib 473 ENCFF000CFB Illumina Genome Analyzer 2016-11-07T03:13:46.975694+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJz0003696kxzJj982F2pP ENCSR000ASM https://www.encodeproject.org/experiments/ENCSR000ASM "histone,histone modification,broad histone mark" H3K4me1-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF272HBX https://www.encodeproject.org/files/ENCFF272HBX/@@download/ENCFF272HBX.bam ENCFF537IBB https://www.encodeproject.org/files/ENCFF537IBB/@@download/ENCFF537IBB.bam 18.5 M 0 17.2 M 0.928 SE 36 36 native 0.0 M 14.0 M 9.1 M 0.490 0.66 0.64 2.60 260 1.23 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/1db9fc91-dbd3-4536-979a-da8732fba6b1/@@download/cross_correlation_plot/ENCFF000CDL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQJ bradley-bernstein:DNA_Lib 691 ENCFF000CDL Illumina Genome Analyzer 2016-11-07T03:13:06.711164+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJyQj0369KGxqqJv3G8Fgv ENCSR000ASM https://www.encodeproject.org/experiments/ENCSR000ASM "histone,histone modification,broad histone mark" H3K4me1-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF632HSE https://www.encodeproject.org/files/ENCFF632HSE/@@download/ENCFF632HSE.bam ENCFF506SDE https://www.encodeproject.org/files/ENCFF506SDE/@@download/ENCFF506SDE.bam 13.5 M 0 12.9 M 0.953 SE 36 36 native 0.0 M 10.7 M 9.9 M 0.733 0.93 0.93 13.94 305 1.27 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/79dc5001-53f8-499f-ae84-73d936ca8583/@@download/cross_correlation_plot/ENCFF000CDK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQI bradley-bernstein:DNA_Lib 636 ENCFF000CDK Illumina Genome Analyzer 2016-11-07T03:12:52.454790+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJybj03696kxzJj982F2p0 ENCSR000ATE https://www.encodeproject.org/experiments/ENCSR000ATE "histone,histone modification,narrow histone mark" H3K4me2-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF387YYF https://www.encodeproject.org/files/ENCFF387YYF/@@download/ENCFF387YYF.bam ENCFF725MXB https://www.encodeproject.org/files/ENCFF725MXB/@@download/ENCFF725MXB.bam 31.8 M 0 30.5 M 0.958 SE 36 36 native 0.0 M 26.1 M 20.2 M 0.634 0.79 0.79 4.88 210 1.72 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/290df371-c8a1-40b0-a0cc-5c64fb775994/@@download/cross_correlation_plot/ENCFF000CDR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALK bradley-bernstein:DNA_Lib 692 ENCFF000CDR HiSeq 2000 2016-11-07T03:12:03.183355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK4x00369JF07kGZ35f37z ENCSR000ATE https://www.encodeproject.org/experiments/ENCSR000ATE "histone,histone modification,narrow histone mark" H3K4me2-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF540WZD https://www.encodeproject.org/files/ENCFF540WZD/@@download/ENCFF540WZD.bam ENCFF675DFA https://www.encodeproject.org/files/ENCFF675DFA/@@download/ENCFF675DFA.bam 26.3 M 0 25.9 M 0.984 SE 36 36 native 0.0 M 22.4 M 1.9 M 0.074 0.11 0.23 3.18 290 1.95 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/71f35e42-bdf8-4fca-8038-c89c37268857/@@download/cross_correlation_plot/ENCFF000CDS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALJ bradley-bernstein:DNA_Lib 489 ENCFF000CDS HiSeq 2000 2016-11-07T03:11:09.029494+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK51j0369BJ3j0F430pYzF ENCSR000ASN https://www.encodeproject.org/experiments/ENCSR000ASN "histone,histone modification,narrow histone mark" H3K4me3-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF521ESS https://www.encodeproject.org/files/ENCFF521ESS/@@download/ENCFF521ESS.bam ENCFF644LDL https://www.encodeproject.org/files/ENCFF644LDL/@@download/ENCFF644LDL.bam 58.9 M 0 57.3 M 0.972 SE 36 36 None 0.0 M 44.7 M 38.5 M 0.653 0.90 0.91 12.54 225 1.54 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/77567a56-a3e1-4880-8797-1a01ffe2a086/@@download/cross_correlation_plot/ENCFF399MSH-ENCFF000CDX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695ABT,ENCLB373HTG" "bradley-bernstein:DNA_Lib 476,bradley-bernstein:DNA_Lib 4724" "ENCFF399MSH,ENCFF000CDX" "HiSeq 2000,Illumina Genome Analyzer" 2016-08-10T01:14:59.044701+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pGV803695XxB1K8gfxQP6 ENCSR000ASN https://www.encodeproject.org/experiments/ENCSR000ASN "histone,histone modification,narrow histone mark" H3K4me3-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF393WAI https://www.encodeproject.org/files/ENCFF393WAI/@@download/ENCFF393WAI.bam ENCFF794SXN https://www.encodeproject.org/files/ENCFF794SXN/@@download/ENCFF794SXN.bam 21.8 M 0 20.9 M 0.959 SE 36 36 None 0.0 M 15.4 M 10.4 M 0.475 0.69 0.68 2.99 260 1.75 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/251a0a48-2d04-471b-b271-5131e064db7f/@@download/cross_correlation_plot/ENCFF000CDZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABU bradley-bernstein:DNA_Lib 471 ENCFF000CDZ Illumina Genome Analyzer 2016-08-10T01:13:28.148489+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pGZ803695XxB1K8gfxQPK ENCSR000ASO https://www.encodeproject.org/experiments/ENCSR000ASO "histone,histone modification,broad histone mark" H3K79me2-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF107GQH https://www.encodeproject.org/files/ENCFF107GQH/@@download/ENCFF107GQH.bam ENCFF464PZB https://www.encodeproject.org/files/ENCFF464PZB/@@download/ENCFF464PZB.bam 22.6 M 0 22.2 M 0.982 SE 36 36 native 0.0 M 17.1 M 12.2 M 0.538 0.72 0.70 3.14 150 1.08 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/8204579f-ed0d-44d9-a560-8f681d8d524b/@@download/cross_correlation_plot/ENCFF000CFG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APH bradley-bernstein:DNA_Lib 702 ENCFF000CFG Illumina Genome Analyzer 2016-11-07T03:13:35.988576+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJy60036941y6xk1837KJQ ENCSR000ASO https://www.encodeproject.org/experiments/ENCSR000ASO "histone,histone modification,broad histone mark" H3K79me2-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF577RIB https://www.encodeproject.org/files/ENCFF577RIB/@@download/ENCFF577RIB.bam ENCFF174XXZ https://www.encodeproject.org/files/ENCFF174XXZ/@@download/ENCFF174XXZ.bam 23.1 M 0 22.9 M 0.991 SE 36 36 native 0.0 M 18.2 M 12.3 M 0.532 0.68 0.66 2.77 115 1.08 0.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e3806c6-0659-474e-904a-09e51e336f90/@@download/cross_correlation_plot/ENCFF000CFH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APG bradley-bernstein:DNA_Lib 494 ENCFF000CFH Illumina Genome Analyzer 2016-11-07T03:13:10.001003+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJyFQ03696Zj590J8YzbZY ENCSR000ATF https://www.encodeproject.org/experiments/ENCSR000ATF "histone,histone modification,narrow histone mark" H3K9ac-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF888GDR https://www.encodeproject.org/files/ENCFF888GDR/@@download/ENCFF888GDR.bam ENCFF869UQU https://www.encodeproject.org/files/ENCFF869UQU/@@download/ENCFF869UQU.bam 21.7 M 0 20.8 M 0.958 SE 36 36 native 0.0 M 16.9 M 7.6 M 0.351 0.49 0.47 1.86 220 1.44 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/4db9f07a-77d0-4a9a-9b56-c2bdb422cdfe/@@download/cross_correlation_plot/ENCFF000CED.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJY bradley-bernstein:DNA_Lib 684 ENCFF000CED HiSeq 2000 2016-11-07T03:18:00.071470+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJZpQ0369Fq9ppXVbB984b ENCSR000ATF https://www.encodeproject.org/experiments/ENCSR000ATF "histone,histone modification,narrow histone mark" H3K9ac-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF843PLE https://www.encodeproject.org/files/ENCFF843PLE/@@download/ENCFF843PLE.bam ENCFF065IGM https://www.encodeproject.org/files/ENCFF065IGM/@@download/ENCFF065IGM.bam 12.0 M 0 10.9 M 0.907 SE 36 36 native 0.0 M 8.9 M 7.9 M 0.654 0.89 0.89 8.79 305 1.49 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/3aacd8d0-7ce5-456b-931d-a9fa68e6cb23/@@download/cross_correlation_plot/ENCFF000CEC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJZ bradley-bernstein:DNA_Lib 637 ENCFF000CEC HiSeq 2000 2016-11-07T03:17:22.507289+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJb1Q03698kJz2gxb7gp7G ENCSR000ASP https://www.encodeproject.org/experiments/ENCSR000ASP "histone,histone modification,broad histone mark" H3K9me3-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF632MOM https://www.encodeproject.org/files/ENCFF632MOM/@@download/ENCFF632MOM.bam ENCFF667WFN https://www.encodeproject.org/files/ENCFF667WFN/@@download/ENCFF667WFN.bam 23.4 M 0 21.6 M 0.924 SE 36 36 native 0.0 M 10.5 M 9.6 M 0.412 0.92 0.92 12.27 235 1.04 0.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/d8c26ce5-7f64-4a2a-a905-aed95e0bbac3/@@download/cross_correlation_plot/ENCFF000CEI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASK bradley-bernstein:DNA_Lib 480 ENCFF000CEI HiSeq 2000 2016-11-07T03:16:25.022872+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJgY003691p5Qf186B55q6 ENCSR000ASP https://www.encodeproject.org/experiments/ENCSR000ASP "histone,histone modification,broad histone mark" H3K9me3-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF367MBB https://www.encodeproject.org/files/ENCFF367MBB/@@download/ENCFF367MBB.bam ENCFF164VYS https://www.encodeproject.org/files/ENCFF164VYS/@@download/ENCFF164VYS.bam 22.6 M 0 21.7 M 0.962 SE 36 36 native 0.0 M 11.1 M 10.6 M 0.469 0.95 0.96 22.29 215 1.03 0.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/289ac7ee-e12d-48bd-971e-d7ba351bb4ea/@@download/cross_correlation_plot/ENCFF000CEJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASL bradley-bernstein:DNA_Lib 475 ENCFF000CEJ HiSeq 2000 2016-11-07T03:16:52.551376+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJggQ03698kJz2gxb7gpB7 ENCSR000ASQ https://www.encodeproject.org/experiments/ENCSR000ASQ "histone,histone modification,broad histone mark" H4K20me1-human CD14-positive monocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF570JFF https://www.encodeproject.org/files/ENCFF570JFF/@@download/ENCFF570JFF.bam ENCFF556UPN https://www.encodeproject.org/files/ENCFF556UPN/@@download/ENCFF556UPN.bam 11.4 M 0 10.9 M 0.957 SE 36 36 native 0.0 M 8.7 M 6.3 M 0.552 0.74 0.72 3.38 235 1.05 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/323bcf39-2630-4206-a260-1a6affccb609/@@download/cross_correlation_plot/ENCFF000CFJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACW bradley-bernstein:DNA_Lib 479 ENCFF000CFJ HiSeq 2000 2016-11-07T03:14:47.274259+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJvp80369B7X2vz98168Gz ENCSR000ASQ https://www.encodeproject.org/experiments/ENCSR000ASQ "histone,histone modification,broad histone mark" H4K20me1-human CD14-positive monocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF777POR https://www.encodeproject.org/files/ENCFF777POR/@@download/ENCFF777POR.bam ENCFF370AEY https://www.encodeproject.org/files/ENCFF370AEY/@@download/ENCFF370AEY.bam 28.3 M 0 27.2 M 0.962 SE 36 36 native 0.0 M 21.5 M 13.5 M 0.478 0.64 0.61 2.37 205 1.05 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbd06df8-11e1-4902-9a88-1ca583cb0331/@@download/cross_correlation_plot/ENCFF000CFL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALT bradley-bernstein:DNA_Lib 474 ENCFF000CFL HiSeq 2000 2016-11-07T03:15:12.753917+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJvz003697bbG5kk8621j4 ENCSR122GIL https://www.encodeproject.org/experiments/ENCSR122GIL control Control-human coronary artery tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF935OQU https://www.encodeproject.org/files/ENCFF935OQU/@@download/ENCFF935OQU.bam ENCFF164WHY https://www.encodeproject.org/files/ENCFF164WHY/@@download/ENCFF164WHY.bam 65.2 M 0 62.7 M 0.962 SE 76 76 native 0.0 M 55.7 M 53.5 M 0.821 0.96 0.96 27.86 540 1.00 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/bec67b4d-a51c-469e-b90d-f7c01e7dddc1/@@download/cross_correlation_plot/ENCFF986FNA-ENCFF461CWB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB498QZF bradley-bernstein:DNA_Lib 8119 "ENCFF461CWB,ENCFF986FNA" HiSeq 2500 2016-10-27T22:05:21.901880+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091QXj03691PG1GVbF47gxj ENCSR443UYU https://www.encodeproject.org/experiments/ENCSR443UYU "histone,histone modification,narrow histone mark" H3K27ac-human coronary artery tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF663UKL https://www.encodeproject.org/files/ENCFF663UKL/@@download/ENCFF663UKL.bam ENCFF694YXZ https://www.encodeproject.org/files/ENCFF694YXZ/@@download/ENCFF694YXZ.bam 42.9 M 0 40.9 M 0.954 SE 76 76 native 0.0 M 38.6 M 34.7 M 0.810 0.90 0.91 11.71 190 1.44 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/f548fed6-9d86-4fa1-a274-a3976171c4f6/@@download/cross_correlation_plot/ENCFF091MNB-ENCFF182ELC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB728WPJ bradley-bernstein:DNA_Lib 8150 "ENCFF091MNB,ENCFF182ELC" HiSeq 2500 2016-10-31T13:26:27.589015+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F82x003693F6GvgxF24kQf ENCSR343ZOV https://www.encodeproject.org/experiments/ENCSR343ZOV "histone,histone modification,narrow histone mark" H3K4me3-human coronary artery tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF423VLB https://www.encodeproject.org/files/ENCFF423VLB/@@download/ENCFF423VLB.bam ENCFF122DIK https://www.encodeproject.org/files/ENCFF122DIK/@@download/ENCFF122DIK.bam 35.5 M 0 33.0 M 0.929 SE 76 76 native 0.0 M 29.4 M 27.7 M 0.781 0.94 0.95 19.58 230 1.32 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/3fe7bd73-f06b-4009-8f28-d5b23889b4aa/@@download/cross_correlation_plot/ENCFF946RNZ-ENCFF588VAS-ENCFF059CJY-ENCFF433VKL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB538HVB bradley-bernstein:DNA_Lib 8202 "ENCFF059CJY,ENCFF946RNZ,ENCFF588VAS,ENCFF433VKL" HiSeq 2500 2016-10-31T13:19:56.896383+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8q7j0369P876f29P7Qb23 ENCSR343ZOV https://www.encodeproject.org/experiments/ENCSR343ZOV "histone,histone modification,narrow histone mark" H3K4me3-human coronary artery tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF945AJW https://www.encodeproject.org/files/ENCFF945AJW/@@download/ENCFF945AJW.bam ENCFF580PZQ https://www.encodeproject.org/files/ENCFF580PZQ/@@download/ENCFF580PZQ.bam 48.0 M 0 44.2 M 0.919 SE 76 76 native 0.0 M 39.6 M 30.6 M 0.637 0.77 0.78 4.64 190 1.73 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/e79e1c1e-d4c7-4626-8429-f3f154881423/@@download/cross_correlation_plot/ENCFF258KJP-ENCFF461PVU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB862BKH bradley-bernstein:DNA_Lib 8149 "ENCFF258KJP,ENCFF461PVU" HiSeq 2500 2016-10-31T13:20:41.048437+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8qGQ03692404175P5YvjZ ENCSR000ASA https://www.encodeproject.org/experiments/ENCSR000ASA control Control-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF531LXG https://www.encodeproject.org/files/ENCFF531LXG/@@download/ENCFF531LXG.bam ENCFF596NBD https://www.encodeproject.org/files/ENCFF596NBD/@@download/ENCFF596NBD.bam 41.1 M 0 40.5 M 0.987 SE 36 36 None 0.0 M 30.7 M 30.4 M 0.740 0.99 0.99 128.00 120 1.01 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/5458dd43-2935-4065-bb61-29e8002e2723/@@download/cross_correlation_plot/ENCFF000AOG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATS ENCFF000AOG Illumina Genome Analyzer 2016-07-13T02:50:34.134592+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z6gj0369032z8KVZgxQF9 ENCSR000ASA https://www.encodeproject.org/experiments/ENCSR000ASA control Control-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF520YRJ https://www.encodeproject.org/files/ENCFF520YRJ/@@download/ENCFF520YRJ.bam ENCFF181BIE https://www.encodeproject.org/files/ENCFF181BIE/@@download/ENCFF181BIE.bam 40.4 M 0 38.9 M 0.964 SE 36 36 None 0.0 M 28.9 M 17.5 M 0.433 0.62 0.60 2.41 155 1.06 3.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/60bc7835-5928-405b-b665-836092688ab8/@@download/cross_correlation_plot/ENCFF000AOF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATT bradley-bernstein:DNA_Lib 114 ENCFF000AOF Illumina Genome Analyzer 2016-07-13T02:49:03.883996+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z6p8036902Vz1B1Zb0kYF ENCSR000AQU https://www.encodeproject.org/experiments/ENCSR000AQU "transcription factor,RNA binding protein" CTCF-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF473RMK https://www.encodeproject.org/files/ENCFF473RMK/@@download/ENCFF473RMK.bam ENCFF929NOZ https://www.encodeproject.org/files/ENCFF929NOZ/@@download/ENCFF929NOZ.bam 36.1 M 0 33.5 M 0.926 SE 36 36 native 0.0 M 27.6 M 20.6 M 0.569 0.75 0.84 9.20 125 3.21 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef034b67-a1b3-46f2-874f-1d9d8bcd0996/@@download/cross_correlation_plot/ENCFF000AOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWE bradley-bernstein:DNA_Lib 269 ENCFF000AOL Illumina Genome Analyzer 2016-12-11T04:03:55.358417+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164zpj0369KbxV61z4GFvQv ENCSR000AQU https://www.encodeproject.org/experiments/ENCSR000AQU "transcription factor,RNA binding protein" CTCF-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF596DJC https://www.encodeproject.org/files/ENCFF596DJC/@@download/ENCFF596DJC.bam ENCFF054KEH https://www.encodeproject.org/files/ENCFF054KEH/@@download/ENCFF054KEH.bam 33.2 M 0 30.1 M 0.909 SE 36 36 native 0.0 M 24.7 M 3.5 M 0.105 0.17 0.28 2.79 125 5.53 2.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/02ecc66c-8a19-4431-9bf5-7bf4d312e73e/@@download/cross_correlation_plot/ENCFF000AOJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWD ENCFF000AOJ Illumina Genome Analyzer 2016-12-11T03:56:18.187432+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164zzQ0369PvYp91zK1PxKJ ENCSR000ASW https://www.encodeproject.org/experiments/ENCSR000ASW "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF723FUN https://www.encodeproject.org/files/ENCFF723FUN/@@download/ENCFF723FUN.bam ENCFF435XWG https://www.encodeproject.org/files/ENCFF435XWG/@@download/ENCFF435XWG.bam 38.6 M 0 27.6 M 0.715 SE 36 36 native 0.0 M 21.3 M 10.7 M 0.278 0.53 0.50 1.87 150 1.13 6.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b7e0b0e-721b-486b-bd3b-c57e11e3fdc5/@@download/cross_correlation_plot/ENCFF000AOP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARO ENCFF000AOP Illumina Genome Analyzer IIx 2016-12-10T22:47:04.684175+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163JPj03692pJ09J76g5fzQ ENCSR000ASW https://www.encodeproject.org/experiments/ENCSR000ASW "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF249MWV https://www.encodeproject.org/files/ENCFF249MWV/@@download/ENCFF249MWV.bam ENCFF839BZE https://www.encodeproject.org/files/ENCFF839BZE/@@download/ENCFF839BZE.bam 37.8 M 0 34.4 M 0.909 SE 36 36 native 0.0 M 26.3 M 22.7 M 0.600 0.88 0.87 7.81 190 1.04 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a296aa7-1c6b-4c1a-890d-05b2c1395b36/@@download/cross_correlation_plot/ENCFF000AOQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARQ bradley-bernstein:DNA_Lib 1663 ENCFF000AOQ HiSeq 2000 2016-12-11T00:13:44.365625+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163JZQ03697vfpg2qKbyZFv ENCSR000ASW https://www.encodeproject.org/experiments/ENCSR000ASW "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human DND-41 immortalized cell line 3 bradley-bernstein ENCODE2 GRCh38 ENCFF113FRZ https://www.encodeproject.org/files/ENCFF113FRZ/@@download/ENCFF113FRZ.bam ENCFF850AIN https://www.encodeproject.org/files/ENCFF850AIN/@@download/ENCFF850AIN.bam 25.9 M 0 24.4 M 0.944 SE 36 36 native 0.0 M 18.4 M 14.0 M 0.543 0.78 0.78 4.43 190 1.08 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/27675d85-d072-4e58-bfaf-ced6b588cad1/@@download/cross_correlation_plot/ENCFF000AOR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARP bradley-bernstein:DNA_Lib 1661 ENCFF000AOR HiSeq 2000 2016-12-10T22:46:57.331782+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163JkQ036969X0jJ6p3fffB ENCSR000AQV https://www.encodeproject.org/experiments/ENCSR000AQV "histone,histone modification,narrow histone mark" H2AFZ-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF421PMB https://www.encodeproject.org/files/ENCFF421PMB/@@download/ENCFF421PMB.bam ENCFF375MKA https://www.encodeproject.org/files/ENCFF375MKA/@@download/ENCFF375MKA.bam 34.7 M 0 32.0 M 0.923 SE 36 36 36 0.0 M 24.8 M 22.7 M 0.653 0.92 0.92 12.68 145 1.18 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/011173e3-20a1-47cd-80ae-4f408b61cfb6/@@download/cross_correlation_plot/ENCFF000APB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALL ENCFF000APB Illumina Genome Analyzer 2016-11-05T17:34:33.420581+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kkbb803697vzB1y0B63VYK ENCSR000AQV https://www.encodeproject.org/experiments/ENCSR000AQV "histone,histone modification,narrow histone mark" H2AFZ-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF077JUW https://www.encodeproject.org/files/ENCFF077JUW/@@download/ENCFF077JUW.bam ENCFF151ARA https://www.encodeproject.org/files/ENCFF151ARA/@@download/ENCFF151ARA.bam 23.1 M 0 18.6 M 0.805 SE 36 36 36 0.0 M 14.6 M 13.6 M 0.588 0.94 0.94 15.46 145 1.18 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/d5ea44f3-2b6e-4d68-96fb-b130df6acd75/@@download/cross_correlation_plot/ENCFF000APA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMY ENCFF000APA Illumina Genome Analyzer 2016-11-05T17:33:45.454387+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kkbp003699P6PYx8BPxQqP ENCSR000AQW https://www.encodeproject.org/experiments/ENCSR000AQW "histone,histone modification,narrow histone mark" H3K27ac-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF072ZAR https://www.encodeproject.org/files/ENCFF072ZAR/@@download/ENCFF072ZAR.bam ENCFF717ISA https://www.encodeproject.org/files/ENCFF717ISA/@@download/ENCFF717ISA.bam 38.4 M 0 37.7 M 0.981 SE 36 None 0.0 M 30.4 M 28.0 M 0.730 0.93 0.94 17.63 135 1.37 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d1cf929-cdd1-4977-81dd-c925313633cb/@@download/cross_correlation_plot/ENCFF000AQI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAO ENCFF000AQI Illumina Genome Analyzer IIx 2016-07-13T02:50:57.185835+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z6Xj03693JvxGJJZb0P3y ENCSR000AQW https://www.encodeproject.org/experiments/ENCSR000AQW "histone,histone modification,narrow histone mark" H3K27ac-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF854LWC https://www.encodeproject.org/files/ENCFF854LWC/@@download/ENCFF854LWC.bam ENCFF242XDS https://www.encodeproject.org/files/ENCFF242XDS/@@download/ENCFF242XDS.bam 45.2 M 0 44.6 M 0.987 SE 36 None 0.0 M 35.5 M 33.4 M 0.739 0.94 0.95 19.36 185 1.16 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/5dcc5a48-da95-4dae-a19b-f3ea153023eb/@@download/cross_correlation_plot/ENCFF000AQH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAP bradley-bernstein:DNA_Lib 270 ENCFF000AQH HiSeq 2000 2016-07-13T02:51:48.335365+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z6b803693JvxGJJZb0P46 ENCSR000ASX https://www.encodeproject.org/experiments/ENCSR000ASX "histone,histone modification,broad histone mark" H3K27me3-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF024MTX https://www.encodeproject.org/files/ENCFF024MTX/@@download/ENCFF024MTX.bam ENCFF850UDQ https://www.encodeproject.org/files/ENCFF850UDQ/@@download/ENCFF850UDQ.bam 41.9 M 0 37.2 M 0.889 SE 36 36 36 0.0 M 29.6 M 28.3 M 0.675 0.96 0.96 23.97 125 1.03 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/9670472e-7d49-4a69-83ed-abb7662e0e91/@@download/cross_correlation_plot/ENCFF000AQN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAV ENCFF000AQN Illumina Genome Analyzer IIx 2016-11-05T17:35:51.490749+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkQv003696jy9Kv0B4Y6kJ ENCSR000ASX https://www.encodeproject.org/experiments/ENCSR000ASX "histone,histone modification,broad histone mark" H3K27me3-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF700KKS https://www.encodeproject.org/files/ENCFF700KKS/@@download/ENCFF700KKS.bam ENCFF525IPL https://www.encodeproject.org/files/ENCFF525IPL/@@download/ENCFF525IPL.bam 52.5 M 0 43.1 M 0.821 SE 36 36 native 0.0 M 33.2 M 15.2 M 0.289 0.49 0.58 3.31 185 1.06 3.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d60a922-947a-4814-9984-4b6e657090e6/@@download/cross_correlation_plot/ENCFF369ZPT-ENCFF694MDP-ENCFF282GEI-ENCFF438GPS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB067QYD bradley-bernstein:DNA_Lib 122 "ENCFF694MDP,ENCFF282GEI,ENCFF438GPS,ENCFF369ZPT" HiSeq 2000 2017-03-13T18:28:48.173355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F33G5xj0369Jq9Q08P87x4xV ENCSR000AQX https://www.encodeproject.org/experiments/ENCSR000AQX "histone,histone modification,broad histone mark" H3K36me3-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF725PXZ https://www.encodeproject.org/files/ENCFF725PXZ/@@download/ENCFF725PXZ.bam ENCFF902EER https://www.encodeproject.org/files/ENCFF902EER/@@download/ENCFF902EER.bam 39.0 M 0 38.3 M 0.980 SE 36 36 36 0.0 M 28.7 M 26.6 M 0.682 0.93 0.93 14.80 150 1.08 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/cda6cbc4-786a-4e7b-a56c-7c620f2f98f3/@@download/cross_correlation_plot/ENCFF000AQW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARY ENCFF000AQW Illumina Genome Analyzer 2016-11-05T17:36:19.050489+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkQ90036959gx6j8B2zB85 ENCSR000AQX https://www.encodeproject.org/experiments/ENCSR000AQX "histone,histone modification,broad histone mark" H3K36me3-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF828XOX https://www.encodeproject.org/files/ENCFF828XOX/@@download/ENCFF828XOX.bam ENCFF257NEV https://www.encodeproject.org/files/ENCFF257NEV/@@download/ENCFF257NEV.bam 23.2 M 0 22.6 M 0.974 SE 36 36 36 0.0 M 16.7 M 16.2 M 0.700 0.97 0.97 35.25 205 1.06 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/3587981b-3d2b-415d-9f9a-20c1a1463fb6/@@download/cross_correlation_plot/ENCFF000AQX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUV bradley-bernstein:DNA_Lib 271 ENCFF000AQX HiSeq 2000 2016-11-05T17:35:48.979576+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkQK003691xQxpZGpbfBKX ENCSR000AQY https://www.encodeproject.org/experiments/ENCSR000AQY "histone,histone modification,broad histone mark" H3K4me1-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF096AJR https://www.encodeproject.org/files/ENCFF096AJR/@@download/ENCFF096AJR.bam ENCFF331NSZ https://www.encodeproject.org/files/ENCFF331NSZ/@@download/ENCFF331NSZ.bam 32.6 M 0 30.1 M 0.923 SE 36 36 36 0.0 M 24.5 M 21.7 M 0.664 0.89 0.89 9.40 155 1.39 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/36dd78f3-57f4-402a-96a3-2059e66a3d79/@@download/cross_correlation_plot/ENCFF000APE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALP ENCFF000APE Illumina Genome Analyzer 2016-11-05T17:34:16.188025+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kkb0Q03699P6PYx8BPxQq1 ENCSR000AQY https://www.encodeproject.org/experiments/ENCSR000AQY "histone,histone modification,broad histone mark" H3K4me1-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF877UMC https://www.encodeproject.org/files/ENCFF877UMC/@@download/ENCFF877UMC.bam ENCFF013IWN https://www.encodeproject.org/files/ENCFF013IWN/@@download/ENCFF013IWN.bam 35.2 M 0 22.8 M 0.647 SE 36 36 36 0.0 M 17.8 M 16.9 M 0.480 0.95 0.95 22.36 180 1.29 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/421a8ef6-2167-419c-a305-384888f8ce7d/@@download/cross_correlation_plot/ENCFF000APD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALO bradley-bernstein:DNA_Lib 128 ENCFF000APD Illumina Genome Analyzer 2016-11-05T17:34:14.338757+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kkb5803693Yx5pkGB3y9BX ENCSR000AQZ https://www.encodeproject.org/experiments/ENCSR000AQZ "histone,histone modification,narrow histone mark" H3K4me2-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF583WIE https://www.encodeproject.org/files/ENCFF583WIE/@@download/ENCFF583WIE.bam ENCFF387CRA https://www.encodeproject.org/files/ENCFF387CRA/@@download/ENCFF387CRA.bam 28.7 M 0 27.5 M 0.959 SE 36 36 36 0.0 M 23.2 M 20.1 M 0.699 0.88 0.89 9.49 140 1.72 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a59bba9-1c82-43a7-b40b-98b2baf869f5/@@download/cross_correlation_plot/ENCFF000APJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUR ENCFF000APJ Illumina Genome Analyzer IIx 2016-11-05T17:39:08.936541+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk4Bj03699P6PYx8BPxQV1 ENCSR000AQZ https://www.encodeproject.org/experiments/ENCSR000AQZ "histone,histone modification,narrow histone mark" H3K4me2-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF156SZB https://www.encodeproject.org/files/ENCFF156SZB/@@download/ENCFF156SZB.bam ENCFF155UCN https://www.encodeproject.org/files/ENCFF155UCN/@@download/ENCFF155UCN.bam 7.9 M 0 7.3 M 0.915 SE 36 36 36 0.0 M 6.0 M 4.8 M 0.600 0.79 0.79 4.72 210 1.63 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f610562-43c2-4c58-9f71-c665edcf8c53/@@download/cross_correlation_plot/ENCFF000APK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHX bradley-bernstein:DNA_Lib 120 ENCFF000APK HiSeq 2000 2016-11-05T17:37:41.812788+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk4Kj0369P6G90pZB0zyj8 ENCSR000ARA https://www.encodeproject.org/experiments/ENCSR000ARA "histone,histone modification,narrow histone mark" H3K4me3-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF728FRM https://www.encodeproject.org/files/ENCFF728FRM/@@download/ENCFF728FRM.bam ENCFF817ZEY https://www.encodeproject.org/files/ENCFF817ZEY/@@download/ENCFF817ZEY.bam 37.7 M 0 36.5 M 0.968 SE 36 36 None 0.0 M 29.7 M 23.1 M 0.612 0.79 0.82 6.50 150 2.06 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/e65f50e1-0f89-4e87-a86f-b475c5b6946a/@@download/cross_correlation_plot/ENCFF000APS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVF ENCFF000APS Illumina Genome Analyzer IIx 2016-08-10T01:13:33.235796+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJXj0369BJjV7XZgY1JgV ENCSR000ARA https://www.encodeproject.org/experiments/ENCSR000ARA "histone,histone modification,narrow histone mark" H3K4me3-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF309TQC https://www.encodeproject.org/files/ENCFF309TQC/@@download/ENCFF309TQC.bam ENCFF760WGB https://www.encodeproject.org/files/ENCFF760WGB/@@download/ENCFF760WGB.bam 30.3 M 0 25.9 M 0.855 SE 36 36 None 0.0 M 20.1 M 18.5 M 0.610 0.92 0.93 15.16 170 1.78 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ae95700-8d5c-4c5b-98a6-cfaed6c05ffe/@@download/cross_correlation_plot/ENCFF000APT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVG bradley-bernstein:DNA_Lib 130 ENCFF000APT HiSeq 2000 2016-08-10T01:13:22.449337+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJZj0369J0gjYVZgfFXbZ ENCSR564VIX https://www.encodeproject.org/experiments/ENCSR564VIX "histone,histone modification,narrow histone mark" H3K4me3-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF832ITL https://www.encodeproject.org/files/ENCFF832ITL/@@download/ENCFF832ITL.bam ENCFF422BBH https://www.encodeproject.org/files/ENCFF422BBH/@@download/ENCFF422BBH.bam 40.5 M 0 39.2 M 0.967 SE 37 37 native 0.0 M 29.8 M 28.4 M 0.701 0.97 0.97 38.53 200 1.02 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/64d1355b-cfa2-4c13-bbb1-d62f97c8a1b2/@@download/cross_correlation_plot/ENCFF312CZM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB583BNU bradley-bernstein:DNA_Lib 4792 ENCFF312CZM HiSeq 2500 2016-08-09T16:52:30.933373+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV4q00369BB4PPpG2jBgGj ENCSR564VIX https://www.encodeproject.org/experiments/ENCSR564VIX "histone,histone modification,narrow histone mark" H3K4me3-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF391HPE https://www.encodeproject.org/files/ENCFF391HPE/@@download/ENCFF391HPE.bam ENCFF289CWQ https://www.encodeproject.org/files/ENCFF289CWQ/@@download/ENCFF289CWQ.bam 34.6 M 0 33.4 M 0.964 SE 37 37 native 0.0 M 26.3 M 23.5 M 0.680 0.94 0.94 17.14 200 1.26 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd2b06a9-6206-479f-a32b-7108e3eb42eb/@@download/cross_correlation_plot/ENCFF899UUK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB965XUW bradley-bernstein:DNA_Lib 4791 ENCFF899UUK HiSeq 2500 2016-08-09T16:51:59.993460+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV4x80369J0Bzfkv2XyvbK ENCSR000ARB https://www.encodeproject.org/experiments/ENCSR000ARB "histone,histone modification,broad histone mark" H3K79me2-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF567WPV https://www.encodeproject.org/files/ENCFF567WPV/@@download/ENCFF567WPV.bam ENCFF981NPT https://www.encodeproject.org/files/ENCFF981NPT/@@download/ENCFF981NPT.bam 39.6 M 0 38.6 M 0.976 SE 36 36 36 0.0 M 30.3 M 28.1 M 0.711 0.93 0.93 15.44 125 1.14 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/37187cfa-7e21-4c58-b91e-98b75af83553/@@download/cross_correlation_plot/ENCFF000ARC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKL ENCFF000ARC Illumina Genome Analyzer 2016-11-05T17:39:12.921121+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk50803697bbG5kk861zVP ENCSR000ARB https://www.encodeproject.org/experiments/ENCSR000ARB "histone,histone modification,broad histone mark" H3K79me2-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF624WHB https://www.encodeproject.org/files/ENCFF624WHB/@@download/ENCFF624WHB.bam ENCFF563ORB https://www.encodeproject.org/files/ENCFF563ORB/@@download/ENCFF563ORB.bam 33.2 M 0 23.3 M 0.702 SE 36 36 36 0.0 M 18.1 M 16.9 M 0.509 0.94 0.94 16.12 120 1.11 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/f35f7877-a797-4b91-a733-78fe12b6693f/@@download/cross_correlation_plot/ENCFF000ARB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVJ bradley-bernstein:DNA_Lib 118 ENCFF000ARB HiSeq 2000 2016-11-05T17:38:27.592864+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk55j036959gx6j8B2zB4J ENCSR000ARY https://www.encodeproject.org/experiments/ENCSR000ARY "histone,histone modification,narrow histone mark" H3K9ac-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF734TTG https://www.encodeproject.org/files/ENCFF734TTG/@@download/ENCFF734TTG.bam ENCFF745FJB https://www.encodeproject.org/files/ENCFF745FJB/@@download/ENCFF745FJB.bam 34.8 M 0 33.4 M 0.960 SE 36 36 36 0.0 M 27.7 M 15.1 M 0.434 0.56 0.53 1.99 170 1.69 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/50f24275-a2e6-4b21-8fd3-008d66981e72/@@download/cross_correlation_plot/ENCFF000APV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIC ENCFF000APV Illumina Genome Analyzer IIx 2016-11-05T17:38:52.263606+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk4b003693Yx5pkGB3y90G ENCSR000ARY https://www.encodeproject.org/experiments/ENCSR000ARY "histone,histone modification,narrow histone mark" H3K9ac-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF122ZPE https://www.encodeproject.org/files/ENCFF122ZPE/@@download/ENCFF122ZPE.bam ENCFF600GYR https://www.encodeproject.org/files/ENCFF600GYR/@@download/ENCFF600GYR.bam 29.3 M 0 28.6 M 0.977 SE 36 36 36 0.0 M 23.9 M 18.0 M 0.615 0.77 0.77 4.44 275 1.84 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/539c431b-7a12-4bdd-8e84-b5f174a46f9e/@@download/cross_correlation_plot/ENCFF000APW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AID bradley-bernstein:DNA_Lib 272 ENCFF000APW HiSeq 2000 2016-11-05T17:38:36.955402+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk4q00369P6G90pZB0zyjQ ENCSR000ARZ https://www.encodeproject.org/experiments/ENCSR000ARZ "histone,histone modification,broad histone mark" H3K9me3-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF978CTG https://www.encodeproject.org/files/ENCFF978CTG/@@download/ENCFF978CTG.bam ENCFF759RWL https://www.encodeproject.org/files/ENCFF759RWL/@@download/ENCFF759RWL.bam 36.1 M 0 34.3 M 0.950 SE 36 36 36 0.0 M 19.5 M 19.0 M 0.525 0.97 0.98 42.29 135 1.03 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/91338512-51db-4dab-bbc5-7535a15b31f4/@@download/cross_correlation_plot/ENCFF000AQB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATD ENCFF000AQB Illumina Genome Analyzer IIx 2016-11-05T17:37:44.282684+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkQXQ0369P6G90pZB0zyvg ENCSR000ARZ https://www.encodeproject.org/experiments/ENCSR000ARZ "histone,histone modification,broad histone mark" H3K9me3-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF455ALF https://www.encodeproject.org/files/ENCFF455ALF/@@download/ENCFF455ALF.bam ENCFF319BDU https://www.encodeproject.org/files/ENCFF319BDU/@@download/ENCFF319BDU.bam 34.3 M 0 30.5 M 0.889 SE 36 36 36 0.0 M 19.3 M 9.8 M 0.284 0.55 0.53 2.10 155 1.11 3.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/df97c223-1cfa-4554-864d-f2bce0cfe373/@@download/cross_correlation_plot/ENCFF000AQC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATE bradley-bernstein:DNA_Lib 117 ENCFF000AQC HiSeq 2000 2016-11-05T17:35:10.597122+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkQgQ0369PbJv8fGB41f8X ENCSR000ARC https://www.encodeproject.org/experiments/ENCSR000ARC "histone,histone modification,broad histone mark" H4K20me1-human DND-41 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF817MNG https://www.encodeproject.org/files/ENCFF817MNG/@@download/ENCFF817MNG.bam ENCFF775IPG https://www.encodeproject.org/files/ENCFF775IPG/@@download/ENCFF775IPG.bam 37.5 M 0 36.2 M 0.967 SE 36 36 36 0.0 M 28.4 M 27.3 M 0.728 0.96 0.96 28.00 120 1.04 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/db87189c-4504-4db5-983b-41910a66fc8b/@@download/cross_correlation_plot/ENCFF000ARF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQX ENCFF000ARF Illumina Genome Analyzer 2016-11-05T17:34:54.981388+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkbBj0369B9XVbg4B76BVb ENCSR000ARC https://www.encodeproject.org/experiments/ENCSR000ARC "histone,histone modification,broad histone mark" H4K20me1-human DND-41 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF843LXK https://www.encodeproject.org/files/ENCFF843LXK/@@download/ENCFF843LXK.bam ENCFF459LZT https://www.encodeproject.org/files/ENCFF459LZT/@@download/ENCFF459LZT.bam 23.7 M 0 20.2 M 0.850 SE 36 36 36 0.0 M 15.0 M 14.7 M 0.621 0.98 0.98 48.14 205 1.04 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/04d1237b-632c-47bb-9c7f-ebdd32dc3774/@@download/cross_correlation_plot/ENCFF000ARE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQY bradley-bernstein:DNA_Lib 129 ENCFF000ARE Illumina Genome Analyzer 2016-11-05T17:33:56.338639+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkbPj0369Fq9ppXVbB95BB ENCSR742WWB https://www.encodeproject.org/experiments/ENCSR742WWB control Control-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF631ENA https://www.encodeproject.org/files/ENCFF631ENA/@@download/ENCFF631ENA.bam ENCFF902XIV https://www.encodeproject.org/files/ENCFF902XIV/@@download/ENCFF902XIV.bam 34.2 M 0 33.0 M 0.964 SE 36 36 None 0.0 M 24.8 M 23.8 M 0.694 0.96 0.96 26.78 200 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d8c70bd-0eef-48c4-a72c-9fc0d9236363/@@download/cross_correlation_plot/ENCFF002AYR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB659JIE bradley-bernstein:DNA_Lib 3036 ENCFF002AYR HiSeq 2000 2016-05-06T18:05:56.353480+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqYJ003691Q4QQpZ2q8Bjp ENCSR742WWB https://www.encodeproject.org/experiments/ENCSR742WWB control Control-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF838RMJ https://www.encodeproject.org/files/ENCFF838RMJ/@@download/ENCFF838RMJ.bam ENCFF741EDI https://www.encodeproject.org/files/ENCFF741EDI/@@download/ENCFF741EDI.bam 39.5 M 0 37.0 M 0.938 SE 36 36 None 0.0 M 27.6 M 24.5 M 0.621 0.90 0.90 10.05 110 1.02 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/50cf4c69-3b5a-4265-8e4c-62ebb8261c8d/@@download/cross_correlation_plot/ENCFF002AXQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB983BCB bradley-bernstein:DNA_Lib 3587 ENCFF002AXQ HiSeq 2000 2016-05-06T18:06:32.346737+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqYKj036986q4kkQ2Q0Kjk ENCSR084RDK https://www.encodeproject.org/experiments/ENCSR084RDK "transcription factor,RNA binding protein" CTCF-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF863PSQ https://www.encodeproject.org/files/ENCFF863PSQ/@@download/ENCFF863PSQ.bam ENCFF806BAK https://www.encodeproject.org/files/ENCFF806BAK/@@download/ENCFF806BAK.bam 46.6 M 0 41.8 M 0.897 SE 36 36 native 0.0 M 33.6 M 12.4 M 0.267 0.40 0.39 1.68 240 1.87 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/a74ded46-6845-47e5-b2b2-72d9c8f35f8c/@@download/cross_correlation_plot/ENCFF002AWX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB575SFP bradley-bernstein:DNA_Lib 3301 ENCFF002AWX HiSeq 2000 2016-08-09T15:13:10.565445+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQP7j0369G0925gv2xQK3K ENCSR084RDK https://www.encodeproject.org/experiments/ENCSR084RDK "transcription factor,RNA binding protein" CTCF-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF092CZO https://www.encodeproject.org/files/ENCFF092CZO/@@download/ENCFF092CZO.bam ENCFF660VBK https://www.encodeproject.org/files/ENCFF660VBK/@@download/ENCFF660VBK.bam 31.1 M 0 28.3 M 0.911 SE 36 36 native 0.0 M 22.5 M 19.9 M 0.641 0.89 0.90 10.02 210 1.77 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/21d365fd-e6f1-4bc5-8e3f-355cb63abe4e/@@download/cross_correlation_plot/ENCFF002AUH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB387MYL bradley-bernstein:DNA_Lib 3288 ENCFF002AUH HiSeq 2000 2016-08-09T15:13:23.132426+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQPB80369FGGBGjG2qk05x ENCSR562NOP https://www.encodeproject.org/experiments/ENCSR562NOP "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF467UCR https://www.encodeproject.org/files/ENCFF467UCR/@@download/ENCFF467UCR.bam ENCFF692KAW https://www.encodeproject.org/files/ENCFF692KAW/@@download/ENCFF692KAW.bam 88.4 M 0 82.8 M 0.936 SE "76,36" 36 36 0.0 M 63.4 M 52.9 M 0.598 0.84 0.83 5.85 195 1.02 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/b00088bd-37a8-4de8-bd9e-b9df9514b9ec/@@download/cross_correlation_plot/ENCFF178RPW-ENCFF768XYK-ENCFF070FBD_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB969TTG bradley-bernstein:DNA_Lib 3858 "ENCFF070FBD,ENCFF768XYK,ENCFF178RPW" "HiSeq 2000,HiSeq 2500" 2016-11-25T20:39:57.353196+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyfkQ03694jJVG35Fx46jf ENCSR562NOP https://www.encodeproject.org/experiments/ENCSR562NOP "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF482HZN https://www.encodeproject.org/files/ENCFF482HZN/@@download/ENCFF482HZN.bam ENCFF605ELT https://www.encodeproject.org/files/ENCFF605ELT/@@download/ENCFF605ELT.bam 47.0 M 0 45.0 M 0.956 SE 76 36 36 0.0 M 34.8 M 26.2 M 0.558 0.75 0.74 3.63 160 1.02 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/6dfbfc42-f46a-4e52-b86c-6e0844f7ff2e/@@download/cross_correlation_plot/ENCFF706MMH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB055KFD bradley-bernstein:DNA_Lib 6016 ENCFF706MMH HiSeq 2500 2016-11-25T20:37:59.357814+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyfzj03697fgyK1xFjYxPX ENCSR859FGW https://www.encodeproject.org/experiments/ENCSR859FGW "histone,histone modification,narrow histone mark" H2AFZ-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF754JAS https://www.encodeproject.org/files/ENCFF754JAS/@@download/ENCFF754JAS.bam ENCFF563AFR https://www.encodeproject.org/files/ENCFF563AFR/@@download/ENCFF563AFR.bam 35.2 M 0 33.4 M 0.949 SE 36 36 native 0.0 M 26.7 M 25.0 M 0.712 0.94 0.94 16.97 205 1.12 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf958298-1f12-495c-87ad-1676c6492c96/@@download/cross_correlation_plot/ENCFF002ATH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB786RXJ bradley-bernstein:DNA_Lib 3872 ENCFF002ATH HiSeq 2000 2016-08-09T16:51:41.763086+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV53803697Xx7B1Q31v05v ENCSR859FGW https://www.encodeproject.org/experiments/ENCSR859FGW "histone,histone modification,narrow histone mark" H2AFZ-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF383JCS https://www.encodeproject.org/files/ENCFF383JCS/@@download/ENCFF383JCS.bam ENCFF776VSG https://www.encodeproject.org/files/ENCFF776VSG/@@download/ENCFF776VSG.bam 27.6 M 0 26.5 M 0.960 SE 36 36 native 0.0 M 21.1 M 20.4 M 0.741 0.97 0.97 37.32 210 1.10 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/2aafd919-74f3-47f2-bd32-885d2cb62227/@@download/cross_correlation_plot/ENCFF449OLG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB802XVH bradley-bernstein:DNA_Lib 3291 ENCFF449OLG HiSeq 2000 2016-08-09T16:51:38.424534+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV55j03691jjxffj2bKpQQ ENCSR966HBM https://www.encodeproject.org/experiments/ENCSR966HBM "histone,histone modification,broad histone mark" H3F3A-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF193OWD https://www.encodeproject.org/files/ENCFF193OWD/@@download/ENCFF193OWD.bam ENCFF363GWD https://www.encodeproject.org/files/ENCFF363GWD/@@download/ENCFF363GWD.bam 30.9 M 0 29.9 M 0.969 SE 76 36 36 0.0 M 23.3 M 20.3 M 0.657 0.87 0.87 7.44 160 1.03 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/e35e4a31-eb16-4e7e-abdb-a3aa5cf9daff/@@download/cross_correlation_plot/ENCFF321ZLW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB190ZRM bradley-bernstein:DNA_Lib 6014 ENCFF321ZLW HiSeq 2000 2016-09-27T20:53:43.764704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9kK00369P46zbq0Zfx5Gb ENCSR966HBM https://www.encodeproject.org/experiments/ENCSR966HBM "histone,histone modification,broad histone mark" H3F3A-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF905QCS https://www.encodeproject.org/files/ENCFF905QCS/@@download/ENCFF905QCS.bam ENCFF515FVY https://www.encodeproject.org/files/ENCFF515FVY/@@download/ENCFF515FVY.bam 78.5 M 0 75.5 M 0.962 SE 76 36 36 0.0 M 58.6 M 49.2 M 0.628 0.84 0.84 6.46 185 1.02 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/88973e58-222a-433e-a853-f99b6a581dbb/@@download/cross_correlation_plot/ENCFF954XHM-ENCFF456IJA_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB412ARC,ENCLB017AOE" "bradley-bernstein:DNA_Lib 6013,bradley-bernstein:DNA_Lib 6533" "ENCFF954XHM,ENCFF456IJA" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:55:48.004525+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9kX00369633G2jjZQbQZY ENCSR741STU https://www.encodeproject.org/experiments/ENCSR741STU "histone,histone modification,narrow histone mark" H3K27ac-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF479VLR https://www.encodeproject.org/files/ENCFF479VLR/@@download/ENCFF479VLR.bam ENCFF614JWN https://www.encodeproject.org/files/ENCFF614JWN/@@download/ENCFF614JWN.bam 33.8 M 0 29.9 M 0.885 SE 36 36 native 0.0 M 24.6 M 15.5 M 0.460 0.65 0.66 2.96 230 1.45 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/0133d8f5-073b-4dab-a5dc-616d5fef8ba9/@@download/cross_correlation_plot/ENCFF002BAM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB404CPG bradley-bernstein:DNA_Lib 3286 ENCFF002BAM HiSeq 2000 2016-08-09T15:12:57.665343+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQQ700369J0Bzfkv2XyvV4 ENCSR741STU https://www.encodeproject.org/experiments/ENCSR741STU "histone,histone modification,narrow histone mark" H3K27ac-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF079AQF https://www.encodeproject.org/files/ENCFF079AQF/@@download/ENCFF079AQF.bam ENCFF609KRO https://www.encodeproject.org/files/ENCFF609KRO/@@download/ENCFF609KRO.bam 36.8 M 0 35.7 M 0.970 SE 36 36 native 0.0 M 29.5 M 19.6 M 0.534 0.69 0.71 3.66 235 1.47 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/26c7bcb7-625c-44ae-aa3d-6e1c05ff8d89/@@download/cross_correlation_plot/ENCFF538SFE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB658ING bradley-bernstein:DNA_Lib 3299 ENCFF538SFE HiSeq 2000 2016-08-09T15:13:20.731856+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQQ9Q0369BB4PPpG2jBg8Q ENCSR350RYG https://www.encodeproject.org/experiments/ENCSR350RYG "histone,histone modification,broad histone mark" H3K27me3-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF308OGJ https://www.encodeproject.org/files/ENCFF308OGJ/@@download/ENCFF308OGJ.bam ENCFF642WAX https://www.encodeproject.org/files/ENCFF642WAX/@@download/ENCFF642WAX.bam 75.3 M 0 71.8 M 0.953 SE "76,36" 36 36 0.0 M 56.3 M 50.5 M 0.670 0.90 0.90 9.79 195 1.02 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/65e748c4-5cc4-457c-a4d4-7c54a5885867/@@download/cross_correlation_plot/ENCFF250WGI-ENCFF072XFE-ENCFF002BAL_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB736EHC bradley-bernstein:DNA_Lib 3285 "ENCFF002BAL,ENCFF072XFE,ENCFF250WGI" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:58:00.706411+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9gYQ0369GPFJ09bf99Ky2 ENCSR350RYG https://www.encodeproject.org/experiments/ENCSR350RYG "histone,histone modification,broad histone mark" H3K27me3-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF472MGX https://www.encodeproject.org/files/ENCFF472MGX/@@download/ENCFF472MGX.bam ENCFF151QBP https://www.encodeproject.org/files/ENCFF151QBP/@@download/ENCFF151QBP.bam 69.2 M 0 67.1 M 0.971 SE "76,36" 36 36 0.0 M 52.8 M 42.6 M 0.616 0.81 0.81 5.19 200 1.02 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3decc55-190f-4850-a267-c7ce01adfe82/@@download/cross_correlation_plot/ENCFF404XXP-ENCFF309TML-ENCFF002BCE_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB508CJP bradley-bernstein:DNA_Lib 3298 "ENCFF002BCE,ENCFF309TML,ENCFF404XXP" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:58:13.524201+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9ggj03698p4zBKJfK8P3b ENCSR784AQY https://www.encodeproject.org/experiments/ENCSR784AQY "histone,histone modification,broad histone mark" H3K36me3-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF946JGN https://www.encodeproject.org/files/ENCFF946JGN/@@download/ENCFF946JGN.bam ENCFF851SYM https://www.encodeproject.org/files/ENCFF851SYM/@@download/ENCFF851SYM.bam 82.5 M 0 80.1 M 0.971 SE "76,36" 36 36 0.0 M 61.2 M 47.8 M 0.579 0.79 0.80 5.06 185 1.03 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/8aeb9505-9063-45f2-921e-65daf41725a6/@@download/cross_correlation_plot/ENCFF678GFG-ENCFF532LUY-ENCFF002AWY_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB593ZGZ bradley-bernstein:DNA_Lib 3300 "ENCFF002AWY,ENCFF532LUY,ENCFF678GFG" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:57:21.012685+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9gx00369P46zbq0Zfx5G0 ENCSR784AQY https://www.encodeproject.org/experiments/ENCSR784AQY "histone,histone modification,broad histone mark" H3K36me3-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF655QIY https://www.encodeproject.org/files/ENCFF655QIY/@@download/ENCFF655QIY.bam ENCFF727WYH https://www.encodeproject.org/files/ENCFF727WYH/@@download/ENCFF727WYH.bam 80.3 M 0 77.6 M 0.966 SE "76,36" 36 36 0.0 M 58.3 M 55.0 M 0.684 0.94 0.95 18.37 205 1.03 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b3e6bb1-6062-4f36-80f8-11e96e5ee2ea/@@download/cross_correlation_plot/ENCFF196DWX-ENCFF131ZIH-ENCFF002BAN_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB541DJK bradley-bernstein:DNA_Lib 3287 "ENCFF196DWX,ENCFF002BAN,ENCFF131ZIH" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:57:15.278463+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9j100369BB5j8v0ZgY7F0 ENCSR460SEN https://www.encodeproject.org/experiments/ENCSR460SEN "histone,histone modification,broad histone mark" H3K4me1-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF298ETB https://www.encodeproject.org/files/ENCFF298ETB/@@download/ENCFF298ETB.bam ENCFF414GZA https://www.encodeproject.org/files/ENCFF414GZA/@@download/ENCFF414GZA.bam 68.7 M 0 66.9 M 0.974 SE "76,36" 36 36 0.0 M 53.9 M 44.1 M 0.642 0.82 0.83 5.77 215 1.16 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/77ffdf65-a9e6-45fb-a439-24fb691f09b6/@@download/cross_correlation_plot/ENCFF913IDD-ENCFF414TVW-ENCFF002BAG_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB156GXN bradley-bernstein:DNA_Lib 3295 "ENCFF414TVW,ENCFF913IDD,ENCFF002BAG" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:56:16.657698+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9k4j03697bxx77JFk25v7 ENCSR460SEN https://www.encodeproject.org/experiments/ENCSR460SEN "histone,histone modification,broad histone mark" H3K4me1-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF941RPH https://www.encodeproject.org/files/ENCFF941RPH/@@download/ENCFF941RPH.bam ENCFF908EDJ https://www.encodeproject.org/files/ENCFF908EDJ/@@download/ENCFF908EDJ.bam 74.8 M 0 72.8 M 0.974 SE "76,36" 36 36 0.0 M 57.9 M 51.2 M 0.685 0.89 0.89 9.14 195 1.16 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ece3838-04c3-429c-8247-8c76bf7cef43/@@download/cross_correlation_plot/ENCFF286FVD-ENCFF651OQN-ENCFF002BAI_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB234AXH bradley-bernstein:DNA_Lib 3282 "ENCFF002BAI,ENCFF651OQN,ENCFF286FVD" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:56:10.979999+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9k8j03699g2P58VFkQzGQ ENCSR992YSL https://www.encodeproject.org/experiments/ENCSR992YSL "histone,histone modification,narrow histone mark" H3K4me2-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF637RZE https://www.encodeproject.org/files/ENCFF637RZE/@@download/ENCFF637RZE.bam ENCFF420CMB https://www.encodeproject.org/files/ENCFF420CMB/@@download/ENCFF420CMB.bam 39.0 M 0 37.2 M 0.953 SE 36 36 native 0.0 M 30.6 M 23.0 M 0.590 0.77 0.77 4.21 230 1.29 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf654ff3-0f4a-4e25-ab1f-0bbf5c262d6f/@@download/cross_correlation_plot/ENCFF002BBV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB056ILV bradley-bernstein:DNA_Lib 3296 ENCFF002BBV HiSeq 2000 2016-10-05T14:19:46.091211+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzkyYxQ03696qPkg5vPxVPXz ENCSR992YSL https://www.encodeproject.org/experiments/ENCSR992YSL "histone,histone modification,narrow histone mark" H3K4me2-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF885GLL https://www.encodeproject.org/files/ENCFF885GLL/@@download/ENCFF885GLL.bam ENCFF544VNN https://www.encodeproject.org/files/ENCFF544VNN/@@download/ENCFF544VNN.bam 36.7 M 0 35.5 M 0.969 SE 36 36 native 0.0 M 29.2 M 27.2 M 0.741 0.93 0.94 16.05 190 1.36 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/b505d707-068d-4305-9bd5-384893f1cb5c/@@download/cross_correlation_plot/ENCFF002BAJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB024MRY bradley-bernstein:DNA_Lib 3283 ENCFF002BAJ HiSeq 2000 2016-10-05T14:19:25.489745+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzkyZ100369JzKgxbbb93y2G ENCSR052WRV https://www.encodeproject.org/experiments/ENCSR052WRV "histone,histone modification,narrow histone mark" H3K4me3-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF318WYE https://www.encodeproject.org/files/ENCFF318WYE/@@download/ENCFF318WYE.bam ENCFF612RWC https://www.encodeproject.org/files/ENCFF612RWC/@@download/ENCFF612RWC.bam 44.6 M 0 43.4 M 0.973 SE "76,36" 36 36 0.0 M 34.7 M 30.9 M 0.693 0.90 0.90 11.05 215 1.44 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0e92fd1-96ac-47c2-b6d3-45e94784349c/@@download/cross_correlation_plot/ENCFF545NBQ-ENCFF773VRJ-ENCFF002BAK_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB677ZTB bradley-bernstein:DNA_Lib 3284 "ENCFF002BAK,ENCFF773VRJ,ENCFF545NBQ" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:56:21.319361+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9gGQ0369GPFJ09bf99Kxb ENCSR052WRV https://www.encodeproject.org/experiments/ENCSR052WRV "histone,histone modification,narrow histone mark" H3K4me3-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF585ZNY https://www.encodeproject.org/files/ENCFF585ZNY/@@download/ENCFF585ZNY.bam ENCFF096LKZ https://www.encodeproject.org/files/ENCFF096LKZ/@@download/ENCFF096LKZ.bam 45.9 M 0 44.2 M 0.961 SE 36 36 native 0.0 M 36.1 M 30.1 M 0.656 0.85 0.86 7.37 215 1.44 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/73145c4d-9538-4ef4-8cdd-b34daf6af5e3/@@download/cross_correlation_plot/ENCFF002BBU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB122AYK bradley-bernstein:DNA_Lib 3297 ENCFF002BBU HiSeq 2000 2016-08-09T15:14:20.822185+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQP4j036900FyV0Q3P2p5x ENCSR623GZY https://www.encodeproject.org/experiments/ENCSR623GZY "histone,histone modification,broad histone mark" H3K79me2-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF903EOR https://www.encodeproject.org/files/ENCFF903EOR/@@download/ENCFF903EOR.bam ENCFF685PEW https://www.encodeproject.org/files/ENCFF685PEW/@@download/ENCFF685PEW.bam 73.1 M 0 70.5 M 0.964 SE "76,36" 36 36 0.0 M 54.7 M 49.6 M 0.678 0.91 0.91 11.95 185 1.09 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/47b3b47b-4ee6-4ec5-8af2-7cc896bcda59/@@download/cross_correlation_plot/ENCFF053ZDX-ENCFF151RRD-ENCFF002AZF_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB950CHJ bradley-bernstein:DNA_Lib 3292 "ENCFF053ZDX,ENCFF151RRD,ENCFF002AZF" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:56:31.174043+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9jkj0369FP3YZ6VFy9kY0 ENCSR623GZY https://www.encodeproject.org/experiments/ENCSR623GZY "histone,histone modification,broad histone mark" H3K79me2-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF236PYW https://www.encodeproject.org/files/ENCFF236PYW/@@download/ENCFF236PYW.bam ENCFF748OOJ https://www.encodeproject.org/files/ENCFF748OOJ/@@download/ENCFF748OOJ.bam 80.9 M 0 77.5 M 0.958 SE "76,36" 36 36 0.0 M 60.5 M 52.4 M 0.648 0.87 0.88 8.51 180 1.11 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/040f1834-245d-4a48-8b13-1b42bb3d9f1f/@@download/cross_correlation_plot/ENCFF722LBO-ENCFF779HQQ-ENCFF002ASS_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB721SEI bradley-bernstein:DNA_Lib 3873 "ENCFF002ASS,ENCFF779HQQ,ENCFF722LBO" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:56:31.557163+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9jy003697bxx77JFk25qx ENCSR463DSJ https://www.encodeproject.org/experiments/ENCSR463DSJ "histone,histone modification,broad histone mark" H3K9me2-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF784EGI https://www.encodeproject.org/files/ENCFF784EGI/@@download/ENCFF784EGI.bam ENCFF159BXM https://www.encodeproject.org/files/ENCFF159BXM/@@download/ENCFF159BXM.bam 77.3 M 0 74.8 M 0.968 SE "76,37" 36 36 0.0 M 57.9 M 48.8 M 0.632 0.84 0.84 6.05 190 1.01 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/87d3436c-1196-43cb-be17-0ee6d3d2a018/@@download/cross_correlation_plot/ENCFF636AOT-ENCFF632RMC-ENCFF002AWE_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB314FAR bradley-bernstein:DNA_Lib 4843 "ENCFF632RMC,ENCFF636AOT,ENCFF002AWE" HiSeq 2500 2016-09-27T20:57:38.227674+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9jPj03696BXQbYZgq13x3 ENCSR463DSJ https://www.encodeproject.org/experiments/ENCSR463DSJ "histone,histone modification,broad histone mark" H3K9me2-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF962CGG https://www.encodeproject.org/files/ENCFF962CGG/@@download/ENCFF962CGG.bam ENCFF771GXT https://www.encodeproject.org/files/ENCFF771GXT/@@download/ENCFF771GXT.bam 82.4 M 0 75.9 M 0.921 SE "76,36" 36 36 0.0 M 57.1 M 49.8 M 0.604 0.90 0.90 9.51 185 1.02 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b78402d-d940-4677-9d3f-e3c8f03d7cfd/@@download/cross_correlation_plot/ENCFF694ZWF-ENCFF335QPW-ENCFF002BBX_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB998GPX bradley-bernstein:DNA_Lib 3294 "ENCFF694ZWF,ENCFF002BBX,ENCFF335QPW" HiSeq 2500 2016-09-27T20:57:12.743039+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9jZ003698ByP745FzVyjv ENCSR627TNG https://www.encodeproject.org/experiments/ENCSR627TNG "histone,histone modification,broad histone mark" H3K9me3-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF220HEB https://www.encodeproject.org/files/ENCFF220HEB/@@download/ENCFF220HEB.bam ENCFF264HPV https://www.encodeproject.org/files/ENCFF264HPV/@@download/ENCFF264HPV.bam 27.2 M 0 25.8 M 0.950 SE 36 36 36 0.0 M 17.2 M 16.2 M 0.595 0.94 0.94 17.83 200 1.02 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ba0693b-e11a-4ea0-bb12-ebd8ffcb400d/@@download/cross_correlation_plot/ENCFF002ASR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB980RFK bradley-bernstein:DNA_Lib 3874 ENCFF002ASR HiSeq 2000 2016-09-27T20:55:16.498965+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9j5Q03696QFJqkZZkBkqj ENCSR627TNG https://www.encodeproject.org/experiments/ENCSR627TNG "histone,histone modification,broad histone mark" H3K9me3-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF986OPA https://www.encodeproject.org/files/ENCFF986OPA/@@download/ENCFF986OPA.bam ENCFF433RMR https://www.encodeproject.org/files/ENCFF433RMR/@@download/ENCFF433RMR.bam 90.7 M 0 87.1 M 0.961 SE "76,36" 36 36 0.0 M 55.1 M 53.2 M 0.587 0.97 0.97 31.85 185 1.02 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ffaf8e4-aa7c-4597-b4b7-5100006358a1/@@download/cross_correlation_plot/ENCFF827ENX-ENCFF697DSB-ENCFF002AXN_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB603FQD bradley-bernstein:DNA_Lib 3293 "ENCFF002AXN,ENCFF827ENX,ENCFF697DSB" "HiSeq 2000,HiSeq 2500" 2016-09-27T20:57:36.526785+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9j9Q03695bpx4zQZxBK2Y ENCSR279JHU https://www.encodeproject.org/experiments/ENCSR279JHU "histone,histone modification,broad histone mark" H4K20me1-human DOHH2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF563LJS https://www.encodeproject.org/files/ENCFF563LJS/@@download/ENCFF563LJS.bam ENCFF052BAG https://www.encodeproject.org/files/ENCFF052BAG/@@download/ENCFF052BAG.bam 29.8 M 0 27.4 M 0.920 SE 36 36 native 0.0 M 21.4 M 14.1 M 0.473 0.68 0.66 2.82 215 1.03 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/41ea89b4-7895-4c41-bc43-fbdb6915eb75/@@download/cross_correlation_plot/ENCFF002BAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB393STY bradley-bernstein:DNA_Lib 3290 ENCFF002BAY HiSeq 2000 2016-10-07T23:17:35.574875+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzv0j4j03690kfFX8V1vJYkV ENCSR279JHU https://www.encodeproject.org/experiments/ENCSR279JHU "histone,histone modification,broad histone mark" H4K20me1-human DOHH2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF529FRX https://www.encodeproject.org/files/ENCFF529FRX/@@download/ENCFF529FRX.bam ENCFF352BFC https://www.encodeproject.org/files/ENCFF352BFC/@@download/ENCFF352BFC.bam 48.6 M 0 47.4 M 0.976 SE 36 36 native 0.0 M 36.6 M 35.6 M 0.733 0.98 0.98 40.68 210 1.01 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa9fbc8b-d258-4908-bbae-fbcb26113208/@@download/cross_correlation_plot/ENCFF002AWK-ENCFF002AVP_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB644DEJ,ENCLB367RCQ" "bradley-bernstein:DNA_Lib 3857,bradley-bernstein:DNA_Lib 3869" "ENCFF002AWK,ENCFF002AVP" HiSeq 2000 2016-10-08T21:20:35.000186+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzv0j8003690Zp37BGvK2893 ENCSR000ALG https://www.encodeproject.org/experiments/ENCSR000ALG control Control-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF780ZFP https://www.encodeproject.org/files/ENCFF780ZFP/@@download/ENCFF780ZFP.bam ENCFF261CBZ https://www.encodeproject.org/files/ENCFF261CBZ/@@download/ENCFF261CBZ.bam 45.3 M 0 24.2 M 0.534 SE 36 36 None 0.0 M 14.8 M 13.9 M 0.307 0.95 0.95 21.13 190 1.02 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf3606ef-9e62-4b81-8f1c-453b3c5cde0b/@@download/cross_correlation_plot/ENCFF000BQW-ENCFF000BQV-ENCFF000BQS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695AUA,ENCLB695AUB,ENCLB695AUC" "ENCFF000BQV,ENCFF000BQS,ENCFF000BQW" "Illumina Genome Analyzer IIx,Illumina Genome Analyzer IIe,Illumina Genome Analyzer II" 2016-07-13T02:51:01.306474+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z6ZQ03697z0vKGJZXgx84 ENCSR000ATA https://www.encodeproject.org/experiments/ENCSR000ATA "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF734WUI https://www.encodeproject.org/files/ENCFF734WUI/@@download/ENCFF734WUI.bam ENCFF280MCJ https://www.encodeproject.org/files/ENCFF280MCJ/@@download/ENCFF280MCJ.bam 54.5 M 0 35.5 M 0.651 SE 36 36 native 0.0 M 26.5 M 23.7 M 0.435 0.92 0.92 12.45 160 1.12 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ce9485f-6bd3-41cf-97af-2f4a5e45790f/@@download/cross_correlation_plot/ENCFF000BRN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALN bradley-bernstein:DNA_Lib 155 ENCFF000BRN HiSeq 2000 2016-12-11T10:38:21.886691+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166ZX80369BJyPz9fb9qYbV ENCSR000ATA https://www.encodeproject.org/experiments/ENCSR000ATA "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF774SET https://www.encodeproject.org/files/ENCFF774SET/@@download/ENCFF774SET.bam ENCFF418VHT https://www.encodeproject.org/files/ENCFF418VHT/@@download/ENCFF418VHT.bam 44.7 M 0 33.5 M 0.749 SE 36 36 native 0.0 M 25.4 M 13.6 M 0.304 0.57 0.55 2.12 120 1.12 3.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/06711893-2f25-4013-874d-078b5dd8a6f1/@@download/cross_correlation_plot/ENCFF000BRJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALM ENCFF000BRJ Illumina Genome Analyzer IIx 2016-12-11T10:16:25.294983+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Zjj0369KbxV61z4GFx20 ENCSR000ASC https://www.encodeproject.org/experiments/ENCSR000ASC "histone,histone modification,narrow histone mark" H2AFZ-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF415YBM https://www.encodeproject.org/files/ENCFF415YBM/@@download/ENCFF415YBM.bam ENCFF086QLD https://www.encodeproject.org/files/ENCFF086QLD/@@download/ENCFF086QLD.bam 23.6 M 0 16.2 M 0.685 SE 36 36 native 0.0 M 13.0 M 12.7 M 0.536 0.98 0.98 42.87 180 1.44 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/946276b6-9c29-4ba1-b4d8-6b44b927d78e/@@download/cross_correlation_plot/ENCFF000BRO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOE bradley-bernstein:DNA_Lib 154 ENCFF000BRO Illumina Genome Analyzer 2016-11-11T15:26:09.558157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg1Zj036945J1QPjf6ZKy1 ENCSR000ASC https://www.encodeproject.org/experiments/ENCSR000ASC "histone,histone modification,narrow histone mark" H2AFZ-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF672PZJ https://www.encodeproject.org/files/ENCFF672PZJ/@@download/ENCFF672PZJ.bam ENCFF813DKN https://www.encodeproject.org/files/ENCFF813DKN/@@download/ENCFF813DKN.bam 41.4 M 0 41.0 M 0.990 SE 36 36 native 0.0 M 33.1 M 32.1 M 0.775 0.97 0.97 38.00 140 1.17 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/911ac0f8-0021-4c5e-82fc-180df2a4ed32/@@download/cross_correlation_plot/ENCFF000BRU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOD ENCFF000BRU Illumina Genome Analyzer 2016-11-11T15:27:25.478673+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg1k003696BZZPjG1pqvpK ENCSR000ALB https://www.encodeproject.org/experiments/ENCSR000ALB "histone,histone modification,narrow histone mark" H3K27ac-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF450EBG https://www.encodeproject.org/files/ENCFF450EBG/@@download/ENCFF450EBG.bam ENCFF735TGN https://www.encodeproject.org/files/ENCFF735TGN/@@download/ENCFF735TGN.bam 22.4 M 0 11.7 M 0.523 SE 36 36 native 0.0 M 8.3 M 6.6 M 0.297 0.87 0.87 7.81 175 1.59 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1f650e6-89ca-4b0b-a034-421304a4b184/@@download/cross_correlation_plot/ENCFF000BSI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APM ENCFF000BSI Illumina Genome Analyzer IIx 2016-08-12T23:32:47.556367+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg3zxj0369Bp2VfVjxGK72K ENCSR000ALB https://www.encodeproject.org/experiments/ENCSR000ALB "histone,histone modification,narrow histone mark" H3K27ac-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF851NCB https://www.encodeproject.org/files/ENCFF851NCB/@@download/ENCFF851NCB.bam ENCFF036NWL https://www.encodeproject.org/files/ENCFF036NWL/@@download/ENCFF036NWL.bam 19.9 M 0 14.7 M 0.737 SE 36 36 native 0.0 M 11.4 M 10.3 M 0.516 0.91 0.91 11.47 220 1.95 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/9995bc29-6ae9-420c-b542-41c287cc821e/@@download/cross_correlation_plot/ENCFF000BSD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APK ENCFF000BSD Illumina Genome Analyzer II 2016-08-12T14:59:00.495297+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByfbQfj036946XvQb09Kj6KV ENCSR000AKK https://www.encodeproject.org/experiments/ENCSR000AKK "histone,histone modification,broad histone mark" H3K27me3-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF764MJN https://www.encodeproject.org/files/ENCFF764MJN/@@download/ENCFF764MJN.bam ENCFF201FNP https://www.encodeproject.org/files/ENCFF201FNP/@@download/ENCFF201FNP.bam 28.1 M 0 13.9 M 0.496 SE 36 36 native 0.0 M 9.0 M 8.5 M 0.301 0.96 0.96 28.19 165 1.06 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a4f0b2b-760f-4c1b-854d-2e96e50be226/@@download/cross_correlation_plot/ENCFF000BSK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACQ ENCFF000BSK Illumina Genome Analyzer IIx 2016-11-13T03:38:29.528093+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgVpj036945J1QPjf6ZqJv ENCSR000AKK https://www.encodeproject.org/experiments/ENCSR000AKK "histone,histone modification,broad histone mark" H3K27me3-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF205VFD https://www.encodeproject.org/files/ENCFF205VFD/@@download/ENCFF205VFD.bam ENCFF549PWP https://www.encodeproject.org/files/ENCFF549PWP/@@download/ENCFF549PWP.bam 16.7 M 0 12.2 M 0.727 SE 51 36 36 0.0 M 8.5 M 8.1 M 0.481 0.95 0.94 18.03 195 1.08 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cdce0d1-bb9d-40b3-9b17-ac4b27143d72/@@download/cross_correlation_plot/ENCFF000BSR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACP ENCFF000BSR Illumina Genome Analyzer II 2017-01-05T21:12:26.464785+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7GzQ0369PjBfKG4QzQvpZ ENCSR000ALC https://www.encodeproject.org/experiments/ENCSR000ALC "histone,histone modification,broad histone mark" H3K36me3-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF486AVB https://www.encodeproject.org/files/ENCFF486AVB/@@download/ENCFF486AVB.bam ENCFF612KZD https://www.encodeproject.org/files/ENCFF612KZD/@@download/ENCFF612KZD.bam 24.5 M 0 12.8 M 0.523 SE 36 36 native 0.0 M 8.1 M 7.9 M 0.322 0.98 0.98 54.28 165 1.03 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/a139c04c-bc1f-4f5d-9fbd-49d8b163892b/@@download/cross_correlation_plot/ENCFF000BSQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVS ENCFF000BSQ Illumina Genome Analyzer IIx 2016-11-13T03:37:40.473711+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgY5Q0369696p87G654vXv ENCSR000ALC https://www.encodeproject.org/experiments/ENCSR000ALC "histone,histone modification,broad histone mark" H3K36me3-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF205BVA https://www.encodeproject.org/files/ENCFF205BVA/@@download/ENCFF205BVA.bam ENCFF988LDZ https://www.encodeproject.org/files/ENCFF988LDZ/@@download/ENCFF988LDZ.bam 11.0 M 0 8.8 M 0.797 SE 36 36 native 0.0 M 5.9 M 5.4 M 0.492 0.92 0.92 12.15 200 1.04 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/814a8c55-7f26-4f27-a2df-ea49cc96da9c/@@download/cross_correlation_plot/ENCFF000BSS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVU ENCFF000BSS Illumina Genome Analyzer II 2016-11-13T00:46:28.272257+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgYB80369BZ4kqbvjGpj88 ENCSR000ALC https://www.encodeproject.org/experiments/ENCSR000ALC "histone,histone modification,broad histone mark" H3K36me3-human endothelial cell of umbilical vein primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF492VQB https://www.encodeproject.org/files/ENCFF492VQB/@@download/ENCFF492VQB.bam ENCFF518PYB https://www.encodeproject.org/files/ENCFF518PYB/@@download/ENCFF518PYB.bam 2.1 M 0 1.8 M 0.856 SE 36 36 native 0.0 M 1.2 M 1.0 M 0.469 0.83 0.83 6.13 155 1.04 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f8ce972-a598-415b-b6b7-a03dfcd5d295/@@download/cross_correlation_plot/ENCFF000BSJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVT ENCFF000BSJ Illumina Genome Analyzer IIx 2016-11-13T00:46:24.146446+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgYKj03696PK1PQ11XpjYx ENCSR000AKL https://www.encodeproject.org/experiments/ENCSR000AKL "histone,histone modification,broad histone mark" H3K4me1-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF627UTL https://www.encodeproject.org/files/ENCFF627UTL/@@download/ENCFF627UTL.bam ENCFF322MOQ https://www.encodeproject.org/files/ENCFF322MOQ/@@download/ENCFF322MOQ.bam 30.6 M 0 15.7 M 0.515 SE 36 36 native 0.0 M 11.3 M 10.1 M 0.331 0.93 0.93 13.57 175 1.27 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/65d71392-df5c-49c8-ba55-ffb0066b663e/@@download/cross_correlation_plot/ENCFF000BTD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKH ENCFF000BTD Illumina Genome Analyzer IIx 2016-11-13T03:38:33.063742+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgX680369632125J8YQ22X ENCSR000AKL https://www.encodeproject.org/experiments/ENCSR000AKL "histone,histone modification,broad histone mark" H3K4me1-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF063CGA https://www.encodeproject.org/files/ENCFF063CGA/@@download/ENCFF063CGA.bam ENCFF811BWU https://www.encodeproject.org/files/ENCFF811BWU/@@download/ENCFF811BWU.bam 17.4 M 0 11.4 M 0.654 SE 36 36 native 0.0 M 8.3 M 7.8 M 0.448 0.93 0.93 15.28 205 1.25 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a67e4a1-ab8b-4836-8fe5-ce570340c44e/@@download/cross_correlation_plot/ENCFF000BSY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKJ ENCFF000BSY Illumina Genome Analyzer II 2016-11-13T03:39:21.743101+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgXFQ0369JKzYX9Gzz3VQb ENCSR000AKL https://www.encodeproject.org/experiments/ENCSR000AKL "histone,histone modification,broad histone mark" H3K4me1-human endothelial cell of umbilical vein primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF393MDN https://www.encodeproject.org/files/ENCFF393MDN/@@download/ENCFF393MDN.bam ENCFF450VNG https://www.encodeproject.org/files/ENCFF450VNG/@@download/ENCFF450VNG.bam 5.7 M 0 3.1 M 0.543 SE 36 36 native 0.0 M 2.0 M 1.9 M 0.340 0.98 0.98 52.17 185 1.34 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a37ce4d-08c5-40d7-b930-1d7f8a4a30d7/@@download/cross_correlation_plot/ENCFF000BSX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKI ENCFF000BSX Illumina Genome Analyzer IIx 2016-11-13T00:46:35.461400+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgXQ0036980Yx5QZkJjQBy ENCSR000AKM https://www.encodeproject.org/experiments/ENCSR000AKM "histone,histone modification,narrow histone mark" H3K4me2-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF219OLH https://www.encodeproject.org/files/ENCFF219OLH/@@download/ENCFF219OLH.bam ENCFF313ESU https://www.encodeproject.org/files/ENCFF313ESU/@@download/ENCFF313ESU.bam 28.2 M 0 11.3 M 0.399 SE 36 36 36 0.0 M 7.4 M 6.9 M 0.245 0.96 0.96 23.67 165 1.55 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee027fb3-fade-458f-9663-bf17f0ec4c9a/@@download/cross_correlation_plot/ENCFF000BTF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKB ENCFF000BTF Illumina Genome Analyzer IIx 2017-01-05T21:12:53.815455+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7JZQ0369Kbx0VG4x73zpJ ENCSR000AKM https://www.encodeproject.org/experiments/ENCSR000AKM "histone,histone modification,narrow histone mark" H3K4me2-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF341ESI https://www.encodeproject.org/files/ENCFF341ESI/@@download/ENCFF341ESI.bam ENCFF518LPN https://www.encodeproject.org/files/ENCFF518LPN/@@download/ENCFF518LPN.bam 17.2 M 0 12.1 M 0.705 SE 51 36 36 0.0 M 8.9 M 8.7 M 0.504 0.98 0.98 42.82 215 1.34 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ae478f2-1595-4085-8a10-601fdb2d7bf7/@@download/cross_correlation_plot/ENCFF000BTN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKA ENCFF000BTN Illumina Genome Analyzer II 2017-01-05T21:12:40.172782+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7JvQ0369PjBfKG4QzQvqQ ENCSR000AKN https://www.encodeproject.org/experiments/ENCSR000AKN "histone,histone modification,narrow histone mark" H3K4me3-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF511MAH https://www.encodeproject.org/files/ENCFF511MAH/@@download/ENCFF511MAH.bam ENCFF568RXY https://www.encodeproject.org/files/ENCFF568RXY/@@download/ENCFF568RXY.bam 27.9 M 0 11.4 M 0.408 SE 36 36 native 0.0 M 7.5 M 6.9 M 0.247 0.94 0.94 18.04 165 2.21 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1e67bb5-acf8-4ee9-84b6-331c193a3845/@@download/cross_correlation_plot/ENCFF000BTS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJU ENCFF000BTS Illumina Genome Analyzer IIx 2016-08-12T15:04:50.292917+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byff04003696fv3xb11gg205 ENCSR000AKN https://www.encodeproject.org/experiments/ENCSR000AKN "histone,histone modification,narrow histone mark" H3K4me3-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF315PDO https://www.encodeproject.org/files/ENCFF315PDO/@@download/ENCFF315PDO.bam ENCFF437VAE https://www.encodeproject.org/files/ENCFF437VAE/@@download/ENCFF437VAE.bam 14.5 M 0 10.4 M 0.719 SE 36 36 native 0.0 M 7.4 M 7.0 M 0.487 0.96 0.96 25.19 200 1.45 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/7914c0f2-2d3e-4f92-a781-552417f4b912/@@download/cross_correlation_plot/ENCFF000BTL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJS ENCFF000BTL Illumina Genome Analyzer II 2016-08-12T15:04:00.285454+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byff06Q0369B9QkbxQ8BJbZx ENCSR578QSO https://www.encodeproject.org/experiments/ENCSR578QSO "histone,histone modification,narrow histone mark" H3K4me3-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF650CMQ https://www.encodeproject.org/files/ENCFF650CMQ/@@download/ENCFF650CMQ.bam ENCFF851WJR https://www.encodeproject.org/files/ENCFF851WJR/@@download/ENCFF851WJR.bam 61.4 M 0 60.2 M 0.980 SE 36 36 native 0.0 M 46.9 M 34.6 M 0.563 0.74 0.74 3.69 215 1.07 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/f62b8f62-fee7-4714-8fc8-bde71ee30fd2/@@download/cross_correlation_plot/ENCFF255MRT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB305XAQ bradley-bernstein:DNA_Lib 5075 ENCFF255MRT HiSeq 2500 2016-11-05T17:41:03.782003+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjZK803690fYk9G03B1f74 ENCSR578QSO https://www.encodeproject.org/experiments/ENCSR578QSO "histone,histone modification,narrow histone mark" H3K4me3-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF146JPX https://www.encodeproject.org/files/ENCFF146JPX/@@download/ENCFF146JPX.bam ENCFF479TVM https://www.encodeproject.org/files/ENCFF479TVM/@@download/ENCFF479TVM.bam 34.7 M 0 33.7 M 0.972 SE 36 36 native 0.0 M 25.9 M 25.1 M 0.725 0.98 0.98 60.68 215 1.14 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/238a7309-b9cc-4353-9d05-b6169411ee79/@@download/cross_correlation_plot/ENCFF356SYW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB204VWR bradley-bernstein:DNA_Lib 4587 ENCFF356SYW HiSeq 2500 2016-11-05T17:39:44.919673+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjZj80369B7X2vz981662j ENCSR000ASD https://www.encodeproject.org/experiments/ENCSR000ASD "histone,histone modification,broad histone mark" H3K79me2-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF115UHU https://www.encodeproject.org/files/ENCFF115UHU/@@download/ENCFF115UHU.bam ENCFF482TON https://www.encodeproject.org/files/ENCFF482TON/@@download/ENCFF482TON.bam 25.7 M 0 20.8 M 0.808 SE 36 36 native 0.0 M 16.1 M 15.5 M 0.602 0.97 0.97 30.24 160 1.17 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f101ae8-566e-484e-aada-6bace85f2369/@@download/cross_correlation_plot/ENCFF000BTT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARW bradley-bernstein:DNA_Lib 153 ENCFF000BTT Illumina Genome Analyzer 2016-11-11T15:30:12.196234+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfk7j0369FfP54JvFgg4x7 ENCSR000ASD https://www.encodeproject.org/experiments/ENCSR000ASD "histone,histone modification,broad histone mark" H3K79me2-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF376AAA https://www.encodeproject.org/files/ENCFF376AAA/@@download/ENCFF376AAA.bam ENCFF328ARE https://www.encodeproject.org/files/ENCFF328ARE/@@download/ENCFF328ARE.bam 40.6 M 0 39.6 M 0.976 SE 36 36 native 0.0 M 30.4 M 28.8 M 0.710 0.95 0.95 21.77 110 1.14 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc156f99-7134-4ca7-992a-825c423c6c42/@@download/cross_correlation_plot/ENCFF000BTX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARX ENCFF000BTX Illumina Genome Analyzer 2016-11-11T15:30:43.121969+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfkKj036935XbqQ06p96V8 ENCSR000ALD https://www.encodeproject.org/experiments/ENCSR000ALD "histone,histone modification,narrow histone mark" H3K9ac-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF529JBK https://www.encodeproject.org/files/ENCFF529JBK/@@download/ENCFF529JBK.bam ENCFF253VDH https://www.encodeproject.org/files/ENCFF253VDH/@@download/ENCFF253VDH.bam 15.6 M 0 9.0 M 0.579 SE 36 36 native 0.0 M 6.6 M 6.3 M 0.404 0.97 0.97 29.90 170 1.65 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0773fed-ee89-41fe-9282-9315297e512d/@@download/cross_correlation_plot/ENCFF000BUE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOX ENCFF000BUE Illumina Genome Analyzer IIx 2016-11-13T03:37:19.801076+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgYZ00369696p87G654vY6 ENCSR000ALD https://www.encodeproject.org/experiments/ENCSR000ALD "histone,histone modification,narrow histone mark" H3K9ac-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF155YDP https://www.encodeproject.org/files/ENCFF155YDP/@@download/ENCFF155YDP.bam ENCFF093LUM https://www.encodeproject.org/files/ENCFF093LUM/@@download/ENCFF093LUM.bam 2.9 M 0 2.3 M 0.787 SE 36 36 native 0.0 M 1.7 M 1.6 M 0.539 0.93 0.93 14.86 215 3.22 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/5685ee44-8761-47ca-a479-cf17cccaa8b1/@@download/cross_correlation_plot/ENCFF000BTY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOW ENCFF000BTY Illumina Genome Analyzer IIx 2016-11-13T00:46:07.344015+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgYkQ036945J1QPjf6ZqKB ENCSR000ALD https://www.encodeproject.org/experiments/ENCSR000ALD "histone,histone modification,narrow histone mark" H3K9ac-human endothelial cell of umbilical vein primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF839QUN https://www.encodeproject.org/files/ENCFF839QUN/@@download/ENCFF839QUN.bam ENCFF287SUA https://www.encodeproject.org/files/ENCFF287SUA/@@download/ENCFF287SUA.bam 10.6 M 0 6.7 M 0.634 SE 36 36 native 0.0 M 5.0 M 4.6 M 0.431 0.93 0.93 13.70 210 2.37 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a25dbe7-7914-4cb6-a5fc-a3ff5444de8f/@@download/cross_correlation_plot/ENCFF000BTW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOV ENCFF000BTW Illumina Genome Analyzer II 2016-11-13T00:46:21.423561+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgYy00369PBFF2z0Pk0Q19 ENCSR000ALE https://www.encodeproject.org/experiments/ENCSR000ALE "histone,histone modification,broad histone mark" H3K9me1-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF824TXG https://www.encodeproject.org/files/ENCFF824TXG/@@download/ENCFF824TXG.bam ENCFF010CHA https://www.encodeproject.org/files/ENCFF010CHA/@@download/ENCFF010CHA.bam 17.4 M 0 10.5 M 0.604 SE 36 36 native 0.0 M 7.2 M 7.0 M 0.404 0.99 0.99 72.46 170 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/27563fd3-a965-4592-bf28-47f083c5f0fb/@@download/cross_correlation_plot/ENCFF000BUJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARE ENCFF000BUJ Illumina Genome Analyzer IIx 2016-11-13T03:37:19.808701+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgZ3Q03694p2jjB4qqvk59 ENCSR000ALE https://www.encodeproject.org/experiments/ENCSR000ALE "histone,histone modification,broad histone mark" H3K9me1-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF378CGW https://www.encodeproject.org/files/ENCFF378CGW/@@download/ENCFF378CGW.bam ENCFF581JTN https://www.encodeproject.org/files/ENCFF581JTN/@@download/ENCFF581JTN.bam 13.5 M 0 8.9 M 0.658 SE 36 36 native 0.0 M 5.8 M 5.6 M 0.411 0.97 0.97 33.27 220 1.02 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2cb868a-ff5d-4694-ba17-48094af606de/@@download/cross_correlation_plot/ENCFF000BUK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARD ENCFF000BUK Illumina Genome Analyzer II 2016-11-13T00:46:25.243401+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgZ800369BZ4kqbvjGpj8Z ENCSR000ALE https://www.encodeproject.org/experiments/ENCSR000ALE "histone,histone modification,broad histone mark" H3K9me1-human endothelial cell of umbilical vein primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF903PZT https://www.encodeproject.org/files/ENCFF903PZT/@@download/ENCFF903PZT.bam ENCFF427LID https://www.encodeproject.org/files/ENCFF427LID/@@download/ENCFF427LID.bam 2.4 M 0 2.0 M 0.844 SE 36 36 native 0.0 M 1.4 M 1.2 M 0.522 0.88 0.88 8.96 150 1.03 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/7eac04ee-cac5-42d5-8a01-e86293ebc639/@@download/cross_correlation_plot/ENCFF000BUD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARC ENCFF000BUD Illumina Genome Analyzer IIx 2016-11-13T00:45:59.903334+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgZJ803698PxP1Qj6z9Zgv ENCSR000ATB https://www.encodeproject.org/experiments/ENCSR000ATB "histone,histone modification,broad histone mark" H3K9me3-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF034DVR https://www.encodeproject.org/files/ENCFF034DVR/@@download/ENCFF034DVR.bam ENCFF983FNC https://www.encodeproject.org/files/ENCFF983FNC/@@download/ENCFF983FNC.bam 30.2 M 0 22.5 M 0.745 SE 36 36 native 0.0 M 11.8 M 11.3 M 0.375 0.96 0.96 26.43 170 1.05 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/4dd7fbca-15ba-420d-84dc-815bc58a2342/@@download/cross_correlation_plot/ENCFF000BRW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARA bradley-bernstein:DNA_Lib 152 ENCFF000BRW HiSeq 2000 2016-11-11T15:26:40.106224+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg0yj03690GY00B90p6vy9 ENCSR000ATB https://www.encodeproject.org/experiments/ENCSR000ATB "histone,histone modification,broad histone mark" H3K9me3-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF111ZMG https://www.encodeproject.org/files/ENCFF111ZMG/@@download/ENCFF111ZMG.bam ENCFF454WXE https://www.encodeproject.org/files/ENCFF454WXE/@@download/ENCFF454WXE.bam 50.4 M 0 45.3 M 0.899 SE 36 36 native 0.0 M 28.6 M 28.1 M 0.558 0.98 0.99 68.24 125 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d7b90cc-b645-4366-af4e-c9755992c35f/@@download/cross_correlation_plot/ENCFF000BRX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQZ ENCFF000BRX Illumina Genome Analyzer IIx 2016-11-11T15:27:53.172975+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg1380369B69qZqv0V7yj7 ENCSR000ALF https://www.encodeproject.org/experiments/ENCSR000ALF "histone,histone modification,broad histone mark" H4K20me1-human endothelial cell of umbilical vein primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF748ZOH https://www.encodeproject.org/files/ENCFF748ZOH/@@download/ENCFF748ZOH.bam ENCFF194OZV https://www.encodeproject.org/files/ENCFF194OZV/@@download/ENCFF194OZV.bam 18.7 M 0 10.9 M 0.582 SE 36 36 native 0.0 M 7.2 M 7.2 M 0.384 0.99 0.99 129.17 140 1.02 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/f011b188-007a-499b-b306-49d3f3f9b5ce/@@download/cross_correlation_plot/ENCFF000BUT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFS ENCFF000BUT Illumina Genome Analyzer IIx 2016-11-13T03:37:22.068778+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgZXj0369696p87G654vYj ENCSR000ALF https://www.encodeproject.org/experiments/ENCSR000ALF "histone,histone modification,broad histone mark" H4K20me1-human endothelial cell of umbilical vein primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF747TLC https://www.encodeproject.org/files/ENCFF747TLC/@@download/ENCFF747TLC.bam ENCFF142GER https://www.encodeproject.org/files/ENCFF142GER/@@download/ENCFF142GER.bam 19.7 M 0 14.5 M 0.732 SE 36 36 native 0.0 M 9.9 M 8.7 M 0.442 0.91 0.91 10.67 185 1.03 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/c35c029b-1972-4cc0-82d8-19ec60a7b13c/@@download/cross_correlation_plot/ENCFF000BUR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFQ ENCFF000BUR Illumina Genome Analyzer II 2016-11-13T00:46:36.437973+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgZg003699PK8zfkzkBkk3 ENCSR000ALF https://www.encodeproject.org/experiments/ENCSR000ALF "histone,histone modification,broad histone mark" H4K20me1-human endothelial cell of umbilical vein primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF661OVK https://www.encodeproject.org/files/ENCFF661OVK/@@download/ENCFF661OVK.bam ENCFF408RCO https://www.encodeproject.org/files/ENCFF408RCO/@@download/ENCFF408RCO.bam 9.9 M 0 2.3 M 0.238 SE 36 36 native 0.0 M 1.2 M 1.1 M 0.117 1.00 1.00 218.28 55 1.02 0.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6872c82-84b4-4a3b-89bc-2a1d863f5349/@@download/cross_correlation_plot/ENCFF000BUQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFR ENCFF000BUQ Illumina Genome Analyzer IIe 2016-11-13T00:46:15.201497+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgZqQ0369BZ4kqbvjGpj90 ENCSR474WLZ https://www.encodeproject.org/experiments/ENCSR474WLZ control Control-human esophagus muscularis mucosa tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF144FKQ https://www.encodeproject.org/files/ENCFF144FKQ/@@download/ENCFF144FKQ.bam ENCFF890LQX https://www.encodeproject.org/files/ENCFF890LQX/@@download/ENCFF890LQX.bam 82.8 M 0 79.9 M 0.965 SE 76 76 native 0.0 M 70.3 M 66.6 M 0.805 0.97 0.97 38.88 90 1.00 0.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/07983b93-4f09-4642-99b5-c4e492b5a78c/@@download/cross_correlation_plot/ENCFF583LPM-ENCFF614GOP-ENCFF433FBI-ENCFF279CHC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB497TEJ,ENCLB520OCT" "bradley-bernstein:DNA_Lib 7977,bradley-bernstein:DNA_Lib 8223" "ENCFF614GOP,ENCFF279CHC,ENCFF433FBI,ENCFF583LPM" HiSeq 2500 2016-10-27T22:04:58.956116+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091VFQ0369J70k2QVF5Bj97 ENCSR095YMD https://www.encodeproject.org/experiments/ENCSR095YMD "histone,histone modification,narrow histone mark" H3K27ac-human esophagus muscularis mucosa tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF065VYW https://www.encodeproject.org/files/ENCFF065VYW/@@download/ENCFF065VYW.bam ENCFF789QQU https://www.encodeproject.org/files/ENCFF789QQU/@@download/ENCFF789QQU.bam 31.4 M 0 30.0 M 0.956 SE 76 76 native 0.0 M 28.1 M 24.2 M 0.772 0.86 0.86 7.38 210 1.36 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/ceb53f43-932b-4718-abf7-a7a484dc346f/@@download/cross_correlation_plot/ENCFF907WMK-ENCFF512DRA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB836RTH bradley-bernstein:DNA_Lib 8070 "ENCFF907WMK,ENCFF512DRA" HiSeq 2500 2016-10-31T13:23:49.408200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8bk80369P876f29P7QZy9 ENCSR177CGN https://www.encodeproject.org/experiments/ENCSR177CGN "histone,histone modification,broad histone mark" H3K27me3-human esophagus muscularis mucosa tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF349LVZ https://www.encodeproject.org/files/ENCFF349LVZ/@@download/ENCFF349LVZ.bam ENCFF331SSS https://www.encodeproject.org/files/ENCFF331SSS/@@download/ENCFF331SSS.bam 73.3 M 0 70.1 M 0.956 SE 76 76 native 0.0 M 61.9 M 57.0 M 0.778 0.92 0.92 12.59 480 1.00 5.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c033495-595c-477c-8096-00d7073ecef2/@@download/cross_correlation_plot/ENCFF471OKC-ENCFF727JOC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB510HSR bradley-bernstein:DNA_Lib 8183 "ENCFF471OKC,ENCFF727JOC" HiSeq 2500 2016-10-31T13:26:26.876321+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8bZ00369668063VP6bvQX ENCSR743KZR https://www.encodeproject.org/experiments/ENCSR743KZR "histone,histone modification,broad histone mark" H3K36me3-human esophagus muscularis mucosa tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF408AOS https://www.encodeproject.org/files/ENCFF408AOS/@@download/ENCFF408AOS.bam ENCFF789ULT https://www.encodeproject.org/files/ENCFF789ULT/@@download/ENCFF789ULT.bam 69.3 M 0 66.4 M 0.958 SE 76 76 native 0.0 M 59.3 M 56.7 M 0.818 0.96 0.96 25.85 280 1.01 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b6cfb28-cdce-4dc4-9808-835f68b96116/@@download/cross_correlation_plot/ENCFF670SWL-ENCFF616IPR-ENCFF724RKY-ENCFF397ZJP_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB919IPT bradley-bernstein:DNA_Lib 8076 "ENCFF397ZJP,ENCFF670SWL,ENCFF724RKY,ENCFF616IPR" HiSeq 2500 2016-10-31T13:26:59.296802+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8f3803692404175P5Yvbj ENCSR229KWP https://www.encodeproject.org/experiments/ENCSR229KWP "histone,histone modification,broad histone mark" H3K4me1-human esophagus muscularis mucosa tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF906LXR https://www.encodeproject.org/files/ENCFF906LXR/@@download/ENCFF906LXR.bam ENCFF701VNB https://www.encodeproject.org/files/ENCFF701VNB/@@download/ENCFF701VNB.bam 115.4 M 0 112.0 M 0.970 SE 76 76 native 0.0 M 101.7 M 97.4 M 0.844 0.96 0.96 26.74 285 1.01 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/effd82fa-9e56-422f-9b79-43d045515158/@@download/cross_correlation_plot/ENCFF642ZLG-ENCFF679YJL-ENCFF338JGV-ENCFF899VKO-ENCFF227KNT-ENCFF042UYA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB142RBB,ENCLB817QTL" "bradley-bernstein:DNA_Lib 8345,bradley-bernstein:DNA_Lib 8179" "ENCFF899VKO,ENCFF227KNT,ENCFF679YJL,ENCFF642ZLG,ENCFF338JGV,ENCFF042UYA" HiSeq 2500 2017-01-27T05:42:26.750436+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F255ZZQ03699PJK0J00QzXQV ENCSR607ARN https://www.encodeproject.org/experiments/ENCSR607ARN "histone,histone modification,narrow histone mark" H3K4me3-human esophagus muscularis mucosa tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF511OLW https://www.encodeproject.org/files/ENCFF511OLW/@@download/ENCFF511OLW.bam ENCFF200QRK https://www.encodeproject.org/files/ENCFF200QRK/@@download/ENCFF200QRK.bam 47.7 M 0 44.4 M 0.932 SE 76 76 native 0.0 M 41.1 M 31.9 M 0.669 0.78 0.80 5.93 190 2.15 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/79586da1-01eb-4abe-bca0-f0970916c757/@@download/cross_correlation_plot/ENCFF794KZW-ENCFF115GTV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB795ZFO bradley-bernstein:DNA_Lib 8167 "ENCFF794KZW,ENCFF115GTV" HiSeq 2500 2016-10-31T13:24:27.562685+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8f7003695140QP5B2xbXZ ENCSR607ARN https://www.encodeproject.org/experiments/ENCSR607ARN "histone,histone modification,narrow histone mark" H3K4me3-human esophagus muscularis mucosa tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF903YYP https://www.encodeproject.org/files/ENCFF903YYP/@@download/ENCFF903YYP.bam ENCFF694DCU https://www.encodeproject.org/files/ENCFF694DCU/@@download/ENCFF694DCU.bam 94.7 M 0 90.5 M 0.955 SE 76 76 native 0.0 M 82.5 M 69.1 M 0.729 0.84 0.87 9.04 210 1.41 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/ded37615-6978-488e-99c2-abae7389a220/@@download/cross_correlation_plot/ENCFF215DKB-ENCFF130WTZ-ENCFF347UDF-ENCFF782EEN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB703EHZ,ENCLB110TIV" "bradley-bernstein:DNA_Lib 8206,bradley-bernstein:DNA_Lib 8314" "ENCFF130WTZ,ENCFF782EEN,ENCFF347UDF,ENCFF215DKB" HiSeq 2500 2017-01-28T06:16:20.785070+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25yfF003691Fp8xFYBg44Q3 ENCSR578MTT https://www.encodeproject.org/experiments/ENCSR578MTT "histone,histone modification,broad histone mark" H3K9me3-human esophagus muscularis mucosa tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF889RNU https://www.encodeproject.org/files/ENCFF889RNU/@@download/ENCFF889RNU.bam ENCFF665POR https://www.encodeproject.org/files/ENCFF665POR/@@download/ENCFF665POR.bam 64.5 M 0 58.5 M 0.907 SE 76 76 native 0.0 M 50.3 M 48.2 M 0.747 0.96 0.96 26.13 185 1.00 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/8629aebf-d327-4eea-959f-7b4e442275d5/@@download/cross_correlation_plot/ENCFF220RFZ-ENCFF202PEQ-ENCFF026JJJ-ENCFF618ZUU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB108RTG bradley-bernstein:DNA_Lib 8187 "ENCFF618ZUU,ENCFF220RFZ,ENCFF202PEQ,ENCFF026JJJ" HiSeq 2500 2016-10-31T13:26:04.970248+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8byQ03692404175P5Yvb7 ENCSR652EPR https://www.encodeproject.org/experiments/ENCSR652EPR control Control-human esophagus squamous epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF305KDB https://www.encodeproject.org/files/ENCFF305KDB/@@download/ENCFF305KDB.bam ENCFF011DCG https://www.encodeproject.org/files/ENCFF011DCG/@@download/ENCFF011DCG.bam 75.4 M 0 72.7 M 0.964 SE 76 76 native 0.0 M 64.5 M 62.5 M 0.829 0.97 0.97 35.85 240 1.00 0.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5879cd7-9fef-47d2-94fa-bc4d018bb7d2/@@download/cross_correlation_plot/ENCFF067KOA-ENCFF142HVK-ENCFF145VOM-ENCFF228AVN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB358KPP bradley-bernstein:DNA_Lib 8235 "ENCFF228AVN,ENCFF067KOA,ENCFF145VOM,ENCFF142HVK" HiSeq 2500 2016-10-27T22:04:24.432503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Vk803693F6GvgxF249j8 ENCSR909UAG https://www.encodeproject.org/experiments/ENCSR909UAG "histone,histone modification,narrow histone mark" H3K27ac-human esophagus squamous epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF952HHU https://www.encodeproject.org/files/ENCFF952HHU/@@download/ENCFF952HHU.bam ENCFF694MWX https://www.encodeproject.org/files/ENCFF694MWX/@@download/ENCFF694MWX.bam 41.5 M 0 39.5 M 0.951 SE 76 76 native 0.0 M 36.6 M 33.2 M 0.798 0.91 0.91 12.06 200 1.33 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/fde815eb-950a-448d-91aa-bc84eb602fe3/@@download/cross_correlation_plot/ENCFF143SOY-ENCFF976BRQ-ENCFF244ISL-ENCFF804MSF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB926RHQ bradley-bernstein:DNA_Lib 8154 "ENCFF804MSF,ENCFF976BRQ,ENCFF143SOY,ENCFF244ISL" HiSeq 2500 2016-11-05T00:21:01.479479+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KK3800369349Kqpx8PZVbQ ENCSR057BFO https://www.encodeproject.org/experiments/ENCSR057BFO "histone,histone modification,broad histone mark" H3K27me3-human esophagus squamous epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF245SNK https://www.encodeproject.org/files/ENCFF245SNK/@@download/ENCFF245SNK.bam ENCFF341QNW https://www.encodeproject.org/files/ENCFF341QNW/@@download/ENCFF341QNW.bam 88.5 M 0 85.4 M 0.965 SE 76 76 native 0.0 M 75.5 M 72.8 M 0.823 0.97 0.97 30.49 245 1.00 0.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f24f2cb-7178-4a06-83b9-322798d45309/@@download/cross_correlation_plot/ENCFF997GUE-ENCFF792QAP-ENCFF694RXF-ENCFF769KKC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB512MLZ bradley-bernstein:DNA_Lib 8342 "ENCFF769KKC,ENCFF792QAP,ENCFF694RXF,ENCFF997GUE" HiSeq 2500 2017-01-25T07:53:42.992857+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2412000369BQ3qg2vYVZ3k9 ENCSR078ZGC https://www.encodeproject.org/experiments/ENCSR078ZGC "histone,histone modification,broad histone mark" H3K36me3-human esophagus squamous epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF050BAX https://www.encodeproject.org/files/ENCFF050BAX/@@download/ENCFF050BAX.bam ENCFF186PTJ https://www.encodeproject.org/files/ENCFF186PTJ/@@download/ENCFF186PTJ.bam 88.8 M 0 86.1 M 0.970 SE 76 76 native 0.0 M 76.5 M 73.4 M 0.827 0.96 0.96 25.48 230 1.00 0.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6578221-60d2-4ed3-8a47-a75c3c1a872f/@@download/cross_correlation_plot/ENCFF596WJL-ENCFF146CFR-ENCFF113WYX-ENCFF293OOZ-ENCFF431ZOR-ENCFF919ENX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB726TPD bradley-bernstein:DNA_Lib 8283 "ENCFF431ZOR,ENCFF146CFR,ENCFF919ENX,ENCFF293OOZ,ENCFF596WJL,ENCFF113WYX" HiSeq 2500 2017-01-27T05:51:08.859485+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F255jY80369FB2f75bZ9QzPk ENCSR121RSS https://www.encodeproject.org/experiments/ENCSR121RSS "histone,histone modification,broad histone mark" H3K4me1-human esophagus squamous epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF675SBU https://www.encodeproject.org/files/ENCFF675SBU/@@download/ENCFF675SBU.bam ENCFF164UPI https://www.encodeproject.org/files/ENCFF164UPI/@@download/ENCFF164UPI.bam 143.6 M 0 138.3 M 0.963 SE 76 76 native 0.0 M 125.1 M 118.4 M 0.825 0.95 0.95 19.33 280 1.01 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0b66cbd-2a1f-49e1-8b4d-9458077b2cae/@@download/cross_correlation_plot/ENCFF657IHS-ENCFF572NVQ-ENCFF507QZN-ENCFF620AXX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB294SQM bradley-bernstein:DNA_Lib 8343 "ENCFF507QZN,ENCFF657IHS,ENCFF572NVQ,ENCFF620AXX" HiSeq 2500 2017-01-25T10:36:05.172079+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2411800369GvZBq15z6X8b3 ENCSR508UPW https://www.encodeproject.org/experiments/ENCSR508UPW "histone,histone modification,narrow histone mark" H3K4me3-human esophagus squamous epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF222IOW https://www.encodeproject.org/files/ENCFF222IOW/@@download/ENCFF222IOW.bam ENCFF989VSV https://www.encodeproject.org/files/ENCFF989VSV/@@download/ENCFF989VSV.bam 41.1 M 0 37.3 M 0.907 SE 76 76 native 0.0 M 33.7 M 27.3 M 0.665 0.81 0.82 6.01 200 1.91 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/a499741a-4f62-4b1b-b5a9-39eb25b8912e/@@download/cross_correlation_plot/ENCFF190YXS-ENCFF571TAK-ENCFF498STU-ENCFF406UNZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB593FJU bradley-bernstein:DNA_Lib 8153 "ENCFF498STU,ENCFF190YXS,ENCFF406UNZ,ENCFF571TAK" HiSeq 2500 2016-10-31T13:20:02.443555+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8vPQ0369668063VP6bvZ9 ENCSR508UPW https://www.encodeproject.org/experiments/ENCSR508UPW "histone,histone modification,narrow histone mark" H3K4me3-human esophagus squamous epithelium tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF404OEM https://www.encodeproject.org/files/ENCFF404OEM/@@download/ENCFF404OEM.bam ENCFF465UFV https://www.encodeproject.org/files/ENCFF465UFV/@@download/ENCFF465UFV.bam 47.5 M 0 45.0 M 0.948 SE 76 76 native 0.0 M 40.9 M 35.3 M 0.744 0.86 0.88 8.80 210 1.70 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/17dd18a0-7283-4717-b01a-ec0cdcfb6382/@@download/cross_correlation_plot/ENCFF059SNY-ENCFF581YWA-ENCFF809FIR-ENCFF640BFT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB174JYZ bradley-bernstein:DNA_Lib 8201 "ENCFF581YWA,ENCFF059SNY,ENCFF809FIR,ENCFF640BFT" HiSeq 2500 2016-10-31T13:20:31.908504+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8vb803692404175P5Yvk6 ENCSR057YVO https://www.encodeproject.org/experiments/ENCSR057YVO "histone,histone modification,broad histone mark" H3K9me3-human esophagus squamous epithelium tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF282FFE https://www.encodeproject.org/files/ENCFF282FFE/@@download/ENCFF282FFE.bam ENCFF641GRC https://www.encodeproject.org/files/ENCFF641GRC/@@download/ENCFF641GRC.bam 53.7 M 0 51.6 M 0.962 SE 76 76 native 0.0 M 44.4 M 43.0 M 0.801 0.97 0.97 35.20 185 1.00 0.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/6206ea84-b89e-41d4-b881-9d75a775d3ed/@@download/cross_correlation_plot/ENCFF429XYU-ENCFF680SIR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB836RKS bradley-bernstein:DNA_Lib 8284 "ENCFF429XYU,ENCFF680SIR" HiSeq 2500 2016-11-05T00:22:16.984615+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KK2pj0369P0J6bFv35k1By ENCSR922FLS https://www.encodeproject.org/experiments/ENCSR922FLS control Control-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF322KCH https://www.encodeproject.org/files/ENCFF322KCH/@@download/ENCFF322KCH.bam ENCFF315MHP https://www.encodeproject.org/files/ENCFF315MHP/@@download/ENCFF315MHP.bam 140.3 M 0 135.3 M 0.964 SE 76 76 native 0.0 M 119.4 M 112.0 M 0.798 0.94 0.94 17.87 195 1.00 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/00759b62-8279-415d-8350-c280d6de3b6c/@@download/cross_correlation_plot/ENCFF780VKF-ENCFF888OQB-ENCFF274RNW-ENCFF460JSA-ENCFF569WIS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB486DRD,ENCLB305UEH" "bradley-bernstein:DNA_Lib 8270,bradley-bernstein:DNA_Lib 5895" "ENCFF274RNW,ENCFF888OQB,ENCFF780VKF,ENCFF460JSA,ENCFF569WIS" HiSeq 2500 2016-10-25T22:04:30.950436+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07J82Q03690qKk7Z513jg2v ENCSR922FLS https://www.encodeproject.org/experiments/ENCSR922FLS control Control-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF027OMV https://www.encodeproject.org/files/ENCFF027OMV/@@download/ENCFF027OMV.bam ENCFF100PMS https://www.encodeproject.org/files/ENCFF100PMS/@@download/ENCFF100PMS.bam 78.6 M 0 76.0 M 0.967 SE 76 76 native 0.0 M 67.3 M 61.9 M 0.787 0.92 0.93 13.34 205 1.00 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b05f904-fe87-4c04-b335-2a8bc93f76ee/@@download/cross_correlation_plot/ENCFF377FRL-ENCFF601FJT-ENCFF105BSH-ENCFF283SSQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB021TGC bradley-bernstein:DNA_Lib 8271 "ENCFF601FJT,ENCFF105BSH,ENCFF283SSQ,ENCFF377FRL" HiSeq 2500 2016-10-25T21:57:03.280906+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07J8980369BPXY7vJzVyJ80 ENCSR795HTY https://www.encodeproject.org/experiments/ENCSR795HTY "transcription factor,RNA binding protein" CTCF-human fibroblast of arm primary cell bradley-bernstein ENCODE3 pending "SE,PE" "76,36" "HiSeq 2000,HiSeq 2500" unrunnable ENCSR397TUH https://www.encodeproject.org/experiments/ENCSR397TUH "histone,histone modification,narrow histone mark" H2AFZ-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF093ELQ https://www.encodeproject.org/files/ENCFF093ELQ/@@download/ENCFF093ELQ.bam ENCFF587MUA https://www.encodeproject.org/files/ENCFF587MUA/@@download/ENCFF587MUA.bam 44.8 M 0 43.0 M 0.960 SE 76 76 native 0.0 M 39.0 M 35.4 M 0.790 0.91 0.91 10.75 220 1.08 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/67c65d73-2e79-4f37-bebf-f70ac236da88/@@download/cross_correlation_plot/ENCFF678JGF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB375RAS bradley-bernstein:DNA_Lib 5871 ENCFF678JGF HiSeq 2500 2016-10-25T21:47:10.852118+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JV3Q0369BPXY7vJzVyJFK ENCSR397TUH https://www.encodeproject.org/experiments/ENCSR397TUH "histone,histone modification,narrow histone mark" H2AFZ-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF360PBG https://www.encodeproject.org/files/ENCFF360PBG/@@download/ENCFF360PBG.bam ENCFF705QTR https://www.encodeproject.org/files/ENCFF705QTR/@@download/ENCFF705QTR.bam 41.0 M 0 39.7 M 0.968 SE 76 76 native 0.0 M 35.8 M 34.1 M 0.831 0.95 0.95 21.82 225 1.08 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/3fa9e35d-afc8-40af-bee8-5a7957ac3ab4/@@download/cross_correlation_plot/ENCFF090JSL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB400GLL bradley-bernstein:DNA_Lib 5875 ENCFF090JSL HiSeq 2000 2016-10-25T21:40:15.889365+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JV7Q0369F6QF32GzJxQjb ENCSR377QMP https://www.encodeproject.org/experiments/ENCSR377QMP "histone,histone modification,broad histone mark" H3F3A-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF491AIS https://www.encodeproject.org/files/ENCFF491AIS/@@download/ENCFF491AIS.bam ENCFF723HCN https://www.encodeproject.org/files/ENCFF723HCN/@@download/ENCFF723HCN.bam 23.4 M 0 22.6 M 0.962 SE 76 76 native 0.0 M 19.7 M 19.0 M 0.811 0.97 0.97 32.84 250 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/8973f767-9389-4a59-996e-781ab8ab485f/@@download/cross_correlation_plot/ENCFF564HYG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB880YIQ bradley-bernstein:DNA_Lib 6319 ENCFF564HYG HiSeq 2500 2016-11-04T03:46:28.068176+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0J3ZP80369JzJYQX59X9qp0 ENCSR377QMP https://www.encodeproject.org/experiments/ENCSR377QMP "histone,histone modification,broad histone mark" H3F3A-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF875QUJ https://www.encodeproject.org/files/ENCFF875QUJ/@@download/ENCFF875QUJ.bam ENCFF942MJW https://www.encodeproject.org/files/ENCFF942MJW/@@download/ENCFF942MJW.bam 79.9 M 0 76.4 M 0.957 SE 76 76 native 0.0 M 67.1 M 59.2 M 0.741 0.89 0.89 8.87 205 1.03 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/d8db053f-969d-4152-84ad-44f9b9d748dd/@@download/cross_correlation_plot/ENCFF063ANS-ENCFF039FBV-ENCFF014YDJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB652ZOL bradley-bernstein:DNA_Lib 6314 "ENCFF014YDJ,ENCFF063ANS,ENCFF039FBV" HiSeq 2500 2016-11-04T03:49:42.070202+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0J3ZY00369GjXJXPb9ZkQgj ENCSR007YOT https://www.encodeproject.org/experiments/ENCSR007YOT "histone,histone modification,narrow histone mark" H3K27ac-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF338JGH https://www.encodeproject.org/files/ENCFF338JGH/@@download/ENCFF338JGH.bam ENCFF207QWZ https://www.encodeproject.org/files/ENCFF207QWZ/@@download/ENCFF207QWZ.bam 34.8 M 0 33.6 M 0.967 SE 76 76 native 0.0 M 31.3 M 25.5 M 0.732 0.82 0.82 5.54 200 1.43 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/e335fe87-fa7f-4afb-8f1e-9af29f139562/@@download/cross_correlation_plot/ENCFF863CCQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB522ZLN bradley-bernstein:DNA_Lib 5867 ENCFF863CCQ HiSeq 2500 2016-10-25T21:47:36.645785+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JQGQ03693fqZYX43J16Jf ENCSR007YOT https://www.encodeproject.org/experiments/ENCSR007YOT "histone,histone modification,narrow histone mark" H3K27ac-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF470UMA https://www.encodeproject.org/files/ENCFF470UMA/@@download/ENCFF470UMA.bam ENCFF575LUX https://www.encodeproject.org/files/ENCFF575LUX/@@download/ENCFF575LUX.bam 33.2 M 0 32.5 M 0.978 SE 76 76 native 0.0 M 30.4 M 26.8 M 0.807 0.88 0.89 9.28 240 1.45 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/a482d013-727e-4aa2-a7c0-f1d7d1e36b9d/@@download/cross_correlation_plot/ENCFF447BFL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB919DQK bradley-bernstein:DNA_Lib 5861 ENCFF447BFL HiSeq 2000 2016-10-25T21:46:13.972506+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JQY803692ZB9QBj36jq01 ENCSR866KFY https://www.encodeproject.org/experiments/ENCSR866KFY "histone,histone modification,broad histone mark" H3K27me3-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF943RTB https://www.encodeproject.org/files/ENCFF943RTB/@@download/ENCFF943RTB.bam ENCFF727VYQ https://www.encodeproject.org/files/ENCFF727VYQ/@@download/ENCFF727VYQ.bam 43.5 M 0 42.3 M 0.973 SE 76 76 native 0.0 M 37.8 M 33.1 M 0.761 0.88 0.88 8.02 185 1.01 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/45aa7f3f-38bd-4e9b-9b14-45de7274c9d8/@@download/cross_correlation_plot/ENCFF773FIB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB866EZN bradley-bernstein:DNA_Lib 5859 ENCFF773FIB HiSeq 2500 2016-10-25T21:04:56.426711+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K4vj03696Y9jfbG3VZg48 ENCSR866KFY https://www.encodeproject.org/experiments/ENCSR866KFY "histone,histone modification,broad histone mark" H3K27me3-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF122SGX https://www.encodeproject.org/files/ENCFF122SGX/@@download/ENCFF122SGX.bam ENCFF832JUB https://www.encodeproject.org/files/ENCFF832JUB/@@download/ENCFF832JUB.bam 45.6 M 0 43.8 M 0.961 SE 76 76 native 0.0 M 39.0 M 32.3 M 0.708 0.83 0.83 5.66 195 1.02 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/975b4c49-cc89-49df-af59-e9bf74337f7a/@@download/cross_correlation_plot/ENCFF380NLA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB670CHL bradley-bernstein:DNA_Lib 5865 ENCFF380NLA HiSeq 2500 2016-10-25T21:05:13.011897+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K50j0369Pqvj8VxzZYz8K ENCSR914AWT https://www.encodeproject.org/experiments/ENCSR914AWT "histone,histone modification,broad histone mark" H3K36me3-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF577GWT https://www.encodeproject.org/files/ENCFF577GWT/@@download/ENCFF577GWT.bam ENCFF645SBD https://www.encodeproject.org/files/ENCFF645SBD/@@download/ENCFF645SBD.bam 53.3 M 0 50.9 M 0.955 SE 76 76 native 0.0 M 44.5 M 37.4 M 0.702 0.84 0.84 6.19 195 1.01 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/c45bbb3d-d765-4ccd-b00f-551aa939e1ce/@@download/cross_correlation_plot/ENCFF112MSI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB974HCB bradley-bernstein:DNA_Lib 5868 ENCFF112MSI HiSeq 2500 2016-10-25T21:48:28.081565+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JPbQ0369KGyBxbkxpb5Fj ENCSR914AWT https://www.encodeproject.org/experiments/ENCSR914AWT "histone,histone modification,broad histone mark" H3K36me3-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF558RXY https://www.encodeproject.org/files/ENCFF558RXY/@@download/ENCFF558RXY.bam ENCFF459LYI https://www.encodeproject.org/files/ENCFF459LYI/@@download/ENCFF459LYI.bam 49.6 M 0 47.4 M 0.957 SE 76 76 native 0.0 M 41.3 M 36.3 M 0.733 0.88 0.88 8.14 185 1.02 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec1b0f62-071d-41cd-9b3c-ef1c40c941aa/@@download/cross_correlation_plot/ENCFF698CME.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB839TOH bradley-bernstein:DNA_Lib 5869 ENCFF698CME HiSeq 2000 2016-10-25T21:47:55.076733+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JPk803692ZB9QBj36jpz8 ENCSR906NGD https://www.encodeproject.org/experiments/ENCSR906NGD "histone,histone modification,broad histone mark" H3K4me1-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF914GDQ https://www.encodeproject.org/files/ENCFF914GDQ/@@download/ENCFF914GDQ.bam ENCFF298KIR https://www.encodeproject.org/files/ENCFF298KIR/@@download/ENCFF298KIR.bam 36.6 M 0 35.8 M 0.977 SE 76 76 native 0.0 M 33.0 M 29.5 M 0.805 0.89 0.89 9.25 200 1.07 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/279cdf68-e292-42a8-9daf-16f2ebf3e312/@@download/cross_correlation_plot/ENCFF182AFY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB503MGA bradley-bernstein:DNA_Lib 5856 ENCFF182AFY HiSeq 2000 2016-10-25T21:51:16.672408+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JP280369F6QF32GzJxQgP ENCSR906NGD https://www.encodeproject.org/experiments/ENCSR906NGD "histone,histone modification,broad histone mark" H3K4me1-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF490ZCW https://www.encodeproject.org/files/ENCFF490ZCW/@@download/ENCFF490ZCW.bam ENCFF023MLC https://www.encodeproject.org/files/ENCFF023MLC/@@download/ENCFF023MLC.bam 37.3 M 0 36.4 M 0.976 SE 76 76 native 0.0 M 33.4 M 31.1 M 0.833 0.93 0.93 14.37 200 1.05 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a8d9903-b203-4bf9-924f-80ac8c0e8d26/@@download/cross_correlation_plot/ENCFF335CQJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB078QTQ bradley-bernstein:DNA_Lib 5862 ENCFF335CQJ HiSeq 2000 2016-10-25T21:47:54.966536+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JP6003692zXjp9j3Fqp8z ENCSR124MTJ https://www.encodeproject.org/experiments/ENCSR124MTJ "histone,histone modification,narrow histone mark" H3K4me2-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF857ONF https://www.encodeproject.org/files/ENCFF857ONF/@@download/ENCFF857ONF.bam ENCFF407OIS https://www.encodeproject.org/files/ENCFF407OIS/@@download/ENCFF407OIS.bam 34.1 M 0 33.1 M 0.971 SE 76 76 native 0.0 M 30.7 M 25.3 M 0.742 0.83 0.82 5.60 200 1.17 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8ddb0e1-aee7-4d10-ae5f-8f172b8c7653/@@download/cross_correlation_plot/ENCFF103VWU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB818INI bradley-bernstein:DNA_Lib 5857 ENCFF103VWU HiSeq 2500 2016-10-25T21:03:50.908012+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K72803697VXYXF1zjJkvX ENCSR479HKJ https://www.encodeproject.org/experiments/ENCSR479HKJ "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF889MWV https://www.encodeproject.org/files/ENCFF889MWV/@@download/ENCFF889MWV.bam ENCFF548IBO https://www.encodeproject.org/files/ENCFF548IBO/@@download/ENCFF548IBO.bam 47.7 M 0 45.4 M 0.952 SE 76 76 native 0.0 M 40.8 M 35.1 M 0.736 0.86 0.86 7.37 215 1.25 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/31fb09de-db61-48bb-8900-eb6f296dfee0/@@download/cross_correlation_plot/ENCFF499TDD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB779ELE bradley-bernstein:DNA_Lib 5864 ENCFF499TDD HiSeq 2000 2016-10-25T21:04:51.827519+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K7yQ03696Y9jfbG3VZg4Z ENCSR479HKJ https://www.encodeproject.org/experiments/ENCSR479HKJ "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF722HLJ https://www.encodeproject.org/files/ENCFF722HLJ/@@download/ENCFF722HLJ.bam ENCFF987UTI https://www.encodeproject.org/files/ENCFF987UTI/@@download/ENCFF987UTI.bam 33.6 M 0 32.4 M 0.964 SE 76 76 native 0.0 M 29.2 M 27.1 M 0.805 0.93 0.93 14.71 200 1.31 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/3da9c687-dcf2-4644-b6e1-4c6898125a35/@@download/cross_correlation_plot/ENCFF436GLO-ENCFF771RQM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB528CWH bradley-bernstein:DNA_Lib 5858 "ENCFF436GLO,ENCFF771RQM" HiSeq 2500 2016-10-25T21:05:16.281844+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K82j0369F6QF32GzJxQvk ENCSR611CRY https://www.encodeproject.org/experiments/ENCSR611CRY "histone,histone modification,broad histone mark" H3K79me2-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF508ODJ https://www.encodeproject.org/files/ENCFF508ODJ/@@download/ENCFF508ODJ.bam ENCFF374YXA https://www.encodeproject.org/files/ENCFF374YXA/@@download/ENCFF374YXA.bam 30.7 M 0 30.0 M 0.978 SE 76 76 native 0.0 M 27.9 M 24.2 M 0.789 0.87 0.87 7.48 210 1.03 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/d89e2c30-85a7-4a26-8995-4b9d799bea03/@@download/cross_correlation_plot/ENCFF772USM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB212YPI bradley-bernstein:DNA_Lib 5872 ENCFF772USM HiSeq 2000 2016-10-25T21:04:00.129879+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K17003692zXjp9j3FqpG1 ENCSR611CRY https://www.encodeproject.org/experiments/ENCSR611CRY "histone,histone modification,broad histone mark" H3K79me2-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF752IVY https://www.encodeproject.org/files/ENCFF752IVY/@@download/ENCFF752IVY.bam ENCFF424GAO https://www.encodeproject.org/files/ENCFF424GAO/@@download/ENCFF424GAO.bam 40.7 M 0 39.7 M 0.976 SE 76 76 native 0.0 M 36.4 M 34.4 M 0.845 0.95 0.95 18.85 245 1.03 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/b82e4207-a951-48f8-950e-670220dc4359/@@download/cross_correlation_plot/ENCFF247ZUN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB839ROY bradley-bernstein:DNA_Lib 5876 ENCFF247ZUN HiSeq 2500 2016-10-25T21:07:17.155993+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K1F803697VXYXF1zjJkqq ENCSR562MOC https://www.encodeproject.org/experiments/ENCSR562MOC "histone,histone modification,narrow histone mark" H3K9ac-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF915WTF https://www.encodeproject.org/files/ENCFF915WTF/@@download/ENCFF915WTF.bam ENCFF727APV https://www.encodeproject.org/files/ENCFF727APV/@@download/ENCFF727APV.bam 36.7 M 0 35.7 M 0.972 SE 76 76 native 0.0 M 33.0 M 27.0 M 0.737 0.82 0.82 5.65 235 1.38 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/4abd8683-840b-4934-8623-5c6765da8503/@@download/cross_correlation_plot/ENCFF270JKL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB252EHD bradley-bernstein:DNA_Lib 5873 ENCFF270JKL HiSeq 2500 2016-11-25T03:05:53.317579+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQkPQ0369159JzpxQx41Fk ENCSR562MOC https://www.encodeproject.org/experiments/ENCSR562MOC "histone,histone modification,narrow histone mark" H3K9ac-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF068GIT https://www.encodeproject.org/files/ENCFF068GIT/@@download/ENCFF068GIT.bam ENCFF275EBV https://www.encodeproject.org/files/ENCFF275EBV/@@download/ENCFF275EBV.bam 49.2 M 0 47.4 M 0.963 SE 76 76 native 0.0 M 44.1 M 38.3 M 0.777 0.87 0.88 9.44 225 1.40 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c208d8e-fcf9-4824-9336-73afd74712c6/@@download/cross_correlation_plot/ENCFF925DDM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB944QRT bradley-bernstein:DNA_Lib 5877 ENCFF925DDM HiSeq 2000 2016-11-25T03:06:36.633648+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQkb803692k1PXjJQV38qx ENCSR328AVV https://www.encodeproject.org/experiments/ENCSR328AVV "histone,histone modification,broad histone mark" H3K9me2-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF976FQR https://www.encodeproject.org/files/ENCFF976FQR/@@download/ENCFF976FQR.bam ENCFF804KMR https://www.encodeproject.org/files/ENCFF804KMR/@@download/ENCFF804KMR.bam 78.0 M 0 73.9 M 0.947 SE 76 76 native 0.0 M 63.9 M 61.2 M 0.785 0.96 0.96 25.97 185 1.01 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8fc301e-56e7-47b5-8312-466cd686cad1/@@download/cross_correlation_plot/ENCFF277SAH-ENCFF539YAN-ENCFF589ZAX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB240RDY bradley-bernstein:DNA_Lib 6313 "ENCFF277SAH,ENCFF539YAN,ENCFF589ZAX" HiSeq 2500 2016-10-25T21:57:49.912140+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07J8q80369BPXY7vJzVyJ8K ENCSR328AVV https://www.encodeproject.org/experiments/ENCSR328AVV "histone,histone modification,broad histone mark" H3K9me2-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF196EGR https://www.encodeproject.org/files/ENCFF196EGR/@@download/ENCFF196EGR.bam ENCFF078ZYW https://www.encodeproject.org/files/ENCFF078ZYW/@@download/ENCFF078ZYW.bam 25.3 M 0 24.1 M 0.953 SE 76 76 native 0.0 M 21.2 M 11.8 M 0.466 0.59 0.59 2.57 215 1.04 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/56f0b5de-ac22-43aa-b01c-98d2b96e859c/@@download/cross_correlation_plot/ENCFF561QWR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB580GXU bradley-bernstein:DNA_Lib 6317 ENCFF561QWR HiSeq 2500 2016-10-25T21:53:21.892265+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07J90003693fqZYX43J169G ENCSR673OPX https://www.encodeproject.org/experiments/ENCSR673OPX "histone,histone modification,broad histone mark" H3K9me3-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF250LJV https://www.encodeproject.org/files/ENCFF250LJV/@@download/ENCFF250LJV.bam ENCFF898BTC https://www.encodeproject.org/files/ENCFF898BTC/@@download/ENCFF898BTC.bam 36.0 M 0 34.5 M 0.960 SE 76 76 native 0.0 M 28.9 M 27.0 M 0.751 0.94 0.94 16.22 185 1.01 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/9011d2f0-55d9-4633-b000-9a58a018192d/@@download/cross_correlation_plot/ENCFF548BVW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB288UHO bradley-bernstein:DNA_Lib 5896 ENCFF548BVW HiSeq 2500 2016-10-25T21:05:49.408028+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K2f803694fk81Y8491yQx ENCSR900AQX https://www.encodeproject.org/experiments/ENCSR900AQX "histone,histone modification,broad histone mark" H4K20me1-human fibroblast of arm primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF126KWX https://www.encodeproject.org/files/ENCFF126KWX/@@download/ENCFF126KWX.bam ENCFF903JKD https://www.encodeproject.org/files/ENCFF903JKD/@@download/ENCFF903JKD.bam 28.9 M 0 27.8 M 0.960 SE 76 76 native 0.0 M 24.2 M 22.8 M 0.787 0.95 0.95 19.15 195 1.01 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/11e9dd97-96c9-42ff-b9fa-5e0d373bd3b4/@@download/cross_correlation_plot/ENCFF130RLD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB566SOP bradley-bernstein:DNA_Lib 6312 ENCFF130RLD HiSeq 2500 2016-10-25T21:57:26.697924+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07J5FQ0369126YyK1zpPGQp ENCSR900AQX https://www.encodeproject.org/experiments/ENCSR900AQX "histone,histone modification,broad histone mark" H4K20me1-human fibroblast of arm primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF069KRG https://www.encodeproject.org/files/ENCFF069KRG/@@download/ENCFF069KRG.bam ENCFF158EPR https://www.encodeproject.org/files/ENCFF158EPR/@@download/ENCFF158EPR.bam 20.7 M 0 19.9 M 0.958 SE 76 76 native 0.0 M 17.3 M 16.9 M 0.816 0.98 0.98 48.78 240 1.01 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/eef9cfa7-9156-40bc-bdae-6ccb53b1cd13/@@download/cross_correlation_plot/ENCFF983QIJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB412CNU bradley-bernstein:DNA_Lib 6318 ENCFF983QIJ HiSeq 2500 2016-10-25T21:57:03.408465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07J5Q80369126YyK1zpPGVB ENCSR000APT https://www.encodeproject.org/experiments/ENCSR000APT control Control-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF782IQQ https://www.encodeproject.org/files/ENCFF782IQQ/@@download/ENCFF782IQQ.bam ENCFF487DBD https://www.encodeproject.org/files/ENCFF487DBD/@@download/ENCFF487DBD.bam 14.1 M 0 4.9 M 0.347 SE 36 36 native 0.0 M 2.8 M 2.8 M 0.201 1.00 1.00 234.25 100 1.03 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/394189b2-f997-4ed3-8f51-115f80c54e88/@@download/cross_correlation_plot/ENCFF000CIW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARK ENCFF000CIW Illumina Genome Analyzer IIx 2017-04-06T23:01:44.857092+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3YFb6Q036923JJ62BbkQV9V ENCSR000APT https://www.encodeproject.org/experiments/ENCSR000APT control Control-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF638YZB https://www.encodeproject.org/files/ENCFF638YZB/@@download/ENCFF638YZB.bam ENCFF429XTA https://www.encodeproject.org/files/ENCFF429XTA/@@download/ENCFF429XTA.bam 76.1 M 0 69.1 M 0.909 SE 36 36 native 0.0 M 51.8 M 38.6 M 0.507 0.76 0.83 7.92 135 1.02 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/08f46dfe-d995-44b9-a5c4-b726c670a635/@@download/cross_correlation_plot/ENCFF955HWE-ENCFF860HKY-ENCFF000CIU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695APT,ENCLB793MPN" bradley-bernstein:DNA_Lib 803 "ENCFF860HKY,ENCFF000CIU,ENCFF955HWE" "Illumina Genome Analyzer IIx,HiSeq 2000" 2017-04-07T01:39:37.999766+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3YFbBQ036912QfZFK6zF19X ENCSR000APT https://www.encodeproject.org/experiments/ENCSR000APT control Control-human fibroblast of dermis primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF753JIU https://www.encodeproject.org/files/ENCFF753JIU/@@download/ENCFF753JIU.bam ENCFF092GQD https://www.encodeproject.org/files/ENCFF092GQD/@@download/ENCFF092GQD.bam 49.0 M 0 41.9 M 0.855 SE 36 36 native 0.0 M 31.4 M 30.4 M 0.620 0.97 0.97 34.91 150 1.01 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/7fc239af-4ff8-454c-b688-1136032667f0/@@download/cross_correlation_plot/ENCFF859VNG-ENCFF412GJA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB401OIW bradley-bernstein:DNA_Lib 801 "ENCFF412GJA,ENCFF859VNG" HiSeq 2000 2017-04-06T01:46:53.611434+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3YFbKQ0369Bg0zv2BFvVy4k ENCSR000APM https://www.encodeproject.org/experiments/ENCSR000APM "transcription factor,RNA binding protein" CTCF-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF623PRW https://www.encodeproject.org/files/ENCFF623PRW/@@download/ENCFF623PRW.bam ENCFF636PAF https://www.encodeproject.org/files/ENCFF636PAF/@@download/ENCFF636PAF.bam 46.0 M 0 16.5 M 0.358 SE 36 36 native 0.0 M 11.3 M 7.6 M 0.165 0.72 0.76 4.90 130 5.94 2.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc31b187-adf1-4572-a82f-a8fd773d9774/@@download/cross_correlation_plot/ENCFF000CJC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWF ENCFF000CJC Illumina Genome Analyzer II 2016-12-11T04:27:31.747487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Xg80369GF0YB1zjPf70X ENCSR000APM https://www.encodeproject.org/experiments/ENCSR000APM "transcription factor,RNA binding protein" CTCF-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF977USM https://www.encodeproject.org/files/ENCFF977USM/@@download/ENCFF977USM.bam ENCFF251VSK https://www.encodeproject.org/files/ENCFF251VSK/@@download/ENCFF251VSK.bam 41.5 M 0 36.2 M 0.873 SE 36 36 native 0.0 M 28.9 M 14.5 M 0.351 0.54 0.50 1.80 135 1.91 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/b547fed3-f579-46b1-a9d2-51352c078518/@@download/cross_correlation_plot/ENCFF000CJD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWG ENCFF000CJD Illumina Genome Analyzer IIx 2016-12-11T04:32:45.139418+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Xv8036933PVVJ7Qq01bY ENCSR000ASE https://www.encodeproject.org/experiments/ENCSR000ASE "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF150RAO https://www.encodeproject.org/files/ENCFF150RAO/@@download/ENCFF150RAO.bam ENCFF604CGY https://www.encodeproject.org/files/ENCFF604CGY/@@download/ENCFF604CGY.bam 23.1 M 0 20.2 M 0.873 SE 36 36 native 0.0 M 15.7 M 9.1 M 0.392 0.59 0.56 2.10 185 1.08 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/e42494f7-9e33-4acc-9ac9-fea2c3ee23e5/@@download/cross_correlation_plot/ENCFF000CJH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEI bradley-bernstein:DNA_Lib 678 ENCFF000CJH HiSeq 2000 2016-12-11T06:49:38.969312+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166bBj0369PvYp91zK1PxvK ENCSR000ASE https://www.encodeproject.org/experiments/ENCSR000ASE "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF142AQQ https://www.encodeproject.org/files/ENCFF142AQQ/@@download/ENCFF142AQQ.bam ENCFF159AEY https://www.encodeproject.org/files/ENCFF159AEY/@@download/ENCFF159AEY.bam 27.7 M 0 21.6 M 0.778 SE 36 36 native 0.0 M 17.0 M 8.9 M 0.320 0.54 0.50 1.84 185 1.14 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/cfc378aa-6069-4881-8f06-2d5595426ec5/@@download/cross_correlation_plot/ENCFF000CJJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEH bradley-bernstein:DNA_Lib 690 ENCFF000CJJ HiSeq 2000 2016-12-11T08:41:44.844039+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166bQQ03692BKq0F3V3jFkG ENCSR000ATG https://www.encodeproject.org/experiments/ENCSR000ATG "histone,histone modification,narrow histone mark" H2AFZ-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF065NBX https://www.encodeproject.org/files/ENCFF065NBX/@@download/ENCFF065NBX.bam ENCFF889BAN https://www.encodeproject.org/files/ENCFF889BAN/@@download/ENCFF889BAN.bam 40.3 M 0 37.9 M 0.940 SE 36 36 native 0.0 M 30.1 M 18.1 M 0.448 0.62 0.60 2.35 150 1.13 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/82c29982-30ac-435e-ba45-29ec1b8df838/@@download/cross_correlation_plot/ENCFF000CJP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANW ENCFF000CJP Illumina Genome Analyzer IIx 2016-11-11T15:28:33.762452+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfyzj036980Yx5QZkJjF56 ENCSR000ATG https://www.encodeproject.org/experiments/ENCSR000ATG "histone,histone modification,narrow histone mark" H2AFZ-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF515NLW https://www.encodeproject.org/files/ENCFF515NLW/@@download/ENCFF515NLW.bam ENCFF400AOJ https://www.encodeproject.org/files/ENCFF400AOJ/@@download/ENCFF400AOJ.bam 34.4 M 0 23.7 M 0.688 SE 36 36 native 0.0 M 19.2 M 16.9 M 0.490 0.88 0.88 8.36 185 1.12 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/5cea1664-273f-4f2a-a0c7-c493700f2bad/@@download/cross_correlation_plot/ENCFF000CJO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANX bradley-bernstein:DNA_Lib 896 ENCFF000CJO HiSeq 2000 2016-11-11T15:28:24.870802+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfz480369FfP54JvFgg50K ENCSR000APN https://www.encodeproject.org/experiments/ENCSR000APN "histone,histone modification,narrow histone mark" H3K27ac-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF228BTY https://www.encodeproject.org/files/ENCFF228BTY/@@download/ENCFF228BTY.bam ENCFF397YYC https://www.encodeproject.org/files/ENCFF397YYC/@@download/ENCFF397YYC.bam 25.5 M 0 11.6 M 0.454 SE 36 36 native 0.0 M 8.3 M 7.7 M 0.304 0.94 0.94 18.36 150 1.87 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d33d08c-2b9f-4c9f-a3fc-480729a18697/@@download/cross_correlation_plot/ENCFF000CKG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATH ENCFF000CKG Illumina Genome Analyzer II 2016-08-09T15:58:48.476630+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYB380369BB4PPpG2jBgz8 ENCSR000APN https://www.encodeproject.org/experiments/ENCSR000APN "histone,histone modification,narrow histone mark" H3K27ac-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF680YEV https://www.encodeproject.org/files/ENCFF680YEV/@@download/ENCFF680YEV.bam ENCFF374TCS https://www.encodeproject.org/files/ENCFF374TCS/@@download/ENCFF374TCS.bam 41.6 M 0 38.8 M 0.931 SE 36 36 native 0.0 M 31.4 M 23.9 M 0.574 0.78 0.77 4.22 155 1.09 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/68bf13ac-c894-4efe-b694-026d4fb0ac14/@@download/cross_correlation_plot/ENCFF000CKH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATI ENCFF000CKH Illumina Genome Analyzer IIx 2016-08-09T15:59:29.317611+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYB5Q036927gfXkG2b308B ENCSR000APO https://www.encodeproject.org/experiments/ENCSR000APO "histone,histone modification,broad histone mark" H3K27me3-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF678BZW https://www.encodeproject.org/files/ENCFF678BZW/@@download/ENCFF678BZW.bam ENCFF145YST https://www.encodeproject.org/files/ENCFF145YST/@@download/ENCFF145YST.bam 32.5 M 0 12.4 M 0.380 SE 36 36 native 0.0 M 7.7 M 6.9 M 0.211 0.92 0.92 14.07 125 1.10 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a4ba21a-4e1b-4a53-be24-aeeda1b4bdac/@@download/cross_correlation_plot/ENCFF000CKM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APX ENCFF000CKM Illumina Genome Analyzer II 2016-11-07T03:16:53.163675+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJfxQ0369KV05GPQGPV5GQ ENCSR000APO https://www.encodeproject.org/experiments/ENCSR000APO "histone,histone modification,broad histone mark" H3K27me3-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF275IVB https://www.encodeproject.org/files/ENCFF275IVB/@@download/ENCFF275IVB.bam ENCFF483VIH https://www.encodeproject.org/files/ENCFF483VIH/@@download/ENCFF483VIH.bam 43.4 M 0 40.0 M 0.921 SE 36 36 native 0.0 M 31.1 M 25.5 M 0.589 0.84 0.83 5.76 135 1.03 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a39f1c3-2783-4934-914a-50e743fa97c3/@@download/cross_correlation_plot/ENCFF000CKN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APW ENCFF000CKN Illumina Genome Analyzer IIx 2016-11-07T03:17:36.572632+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJg3003697GFbjV1b4gVgG ENCSR000APP https://www.encodeproject.org/experiments/ENCSR000APP "histone,histone modification,broad histone mark" H3K36me3-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF008XJN https://www.encodeproject.org/files/ENCFF008XJN/@@download/ENCFF008XJN.bam ENCFF738VVF https://www.encodeproject.org/files/ENCFF738VVF/@@download/ENCFF738VVF.bam 20.1 M 0 13.4 M 0.666 SE 36 36 native 0.0 M 9.4 M 8.5 M 0.422 0.91 0.91 10.93 -5 1.02 0.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/899be57d-847b-47ae-bc0b-5f3307e8ab51/@@download/cross_correlation_plot/ENCFF000CKR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJW ENCFF000CKR Illumina Genome Analyzer II 2016-11-07T03:11:54.352210+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK2FQ0369B7X2vz98168VY ENCSR000APP https://www.encodeproject.org/experiments/ENCSR000APP "histone,histone modification,broad histone mark" H3K36me3-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF290MBH https://www.encodeproject.org/files/ENCFF290MBH/@@download/ENCFF290MBH.bam ENCFF584RGY https://www.encodeproject.org/files/ENCFF584RGY/@@download/ENCFF584RGY.bam 48.7 M 0 42.8 M 0.879 SE 36 36 native 0.0 M 32.2 M 29.0 M 0.596 0.91 0.91 11.69 130 1.03 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c302c61-6794-4595-b518-4cb7a9fda378/@@download/cross_correlation_plot/ENCFF000CKU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJX ENCFF000CKU Illumina Genome Analyzer IIx 2016-11-07T03:13:11.865914+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK2Q803696Zj590J8YzbjZ ENCSR000ARV https://www.encodeproject.org/experiments/ENCSR000ARV "histone,histone modification,broad histone mark" H3K4me1-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF788DNK https://www.encodeproject.org/files/ENCFF788DNK/@@download/ENCFF788DNK.bam ENCFF874ROO https://www.encodeproject.org/files/ENCFF874ROO/@@download/ENCFF874ROO.bam 22.2 M 0 11.0 M 0.497 SE 36 36 native 0.0 M 7.6 M 7.2 M 0.323 0.96 0.96 26.15 145 1.17 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/23668b99-829e-4c8a-93d1-f167289026c1/@@download/cross_correlation_plot/ENCFF000CJT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANZ ENCFF000CJT Illumina Genome Analyzer IIx 2016-11-07T03:15:51.411972+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJpx00369F4g82fJbGXYKp ENCSR000ARV https://www.encodeproject.org/experiments/ENCSR000ARV "histone,histone modification,broad histone mark" H3K4me1-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF320ICB https://www.encodeproject.org/files/ENCFF320ICB/@@download/ENCFF320ICB.bam ENCFF260XKY https://www.encodeproject.org/files/ENCFF260XKY/@@download/ENCFF260XKY.bam 46.9 M 0 45.5 M 0.970 SE 36 36 native 0.0 M 38.0 M 36.3 M 0.773 0.96 0.96 24.48 160 1.11 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ac3451f-70d5-439a-b62b-3618fd27a01c/@@download/cross_correlation_plot/ENCFF000CJY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANY ENCFF000CJY HiSeq 2000 2016-11-07T03:16:57.682875+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJq28036954FbBZ1bGf46B ENCSR000APQ https://www.encodeproject.org/experiments/ENCSR000APQ "histone,histone modification,narrow histone mark" H3K4me2-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF941ZSZ https://www.encodeproject.org/files/ENCFF941ZSZ/@@download/ENCFF941ZSZ.bam ENCFF968VOK https://www.encodeproject.org/files/ENCFF968VOK/@@download/ENCFF968VOK.bam 25.1 M 0 13.2 M 0.525 SE 36 36 native 0.0 M 9.3 M 8.8 M 0.352 0.96 0.96 25.97 135 1.46 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/a66ded5f-e85c-4dc7-9ee6-b714c5897a4f/@@download/cross_correlation_plot/ENCFF000CKY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALV ENCFF000CKY Illumina Genome Analyzer IIx 2016-11-07T03:16:16.904990+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJj7003697GFbjV1b4gVjV ENCSR000APQ https://www.encodeproject.org/experiments/ENCSR000APQ "histone,histone modification,narrow histone mark" H3K4me2-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF067DQJ https://www.encodeproject.org/files/ENCFF067DQJ/@@download/ENCFF067DQJ.bam ENCFF969BNP https://www.encodeproject.org/files/ENCFF969BNP/@@download/ENCFF969BNP.bam 38.9 M 0 36.3 M 0.933 SE 36 36 native 0.0 M 29.9 M 25.4 M 0.653 0.86 0.86 7.25 180 1.23 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/5946af68-4025-445c-aa85-848d898bed17/@@download/cross_correlation_plot/ENCFF000CKZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALW ENCFF000CKZ Illumina Genome Analyzer IIx 2016-11-07T03:17:19.529362+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJjGQ03697GFbjV1b4gVjv ENCSR000APR https://www.encodeproject.org/experiments/ENCSR000APR "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF619XJS https://www.encodeproject.org/files/ENCFF619XJS/@@download/ENCFF619XJS.bam ENCFF223AJS https://www.encodeproject.org/files/ENCFF223AJS/@@download/ENCFF223AJS.bam 48.3 M 0 16.0 M 0.331 SE 36 36 native 0.0 M 9.9 M 9.1 M 0.189 0.93 0.94 17.00 140 1.87 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/c14c41bd-3e0c-433a-81bc-1706f31ef6eb/@@download/cross_correlation_plot/ENCFF000CLG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAQ ENCFF000CLG Illumina Genome Analyzer II 2016-08-20T15:06:39.346085+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byqy7x003692BQgFKG75j8KQ ENCSR000APR https://www.encodeproject.org/experiments/ENCSR000APR "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF242IST https://www.encodeproject.org/files/ENCFF242IST/@@download/ENCFF242IST.bam ENCFF175JZG https://www.encodeproject.org/files/ENCFF175JZG/@@download/ENCFF175JZG.bam 47.3 M 0 41.4 M 0.877 SE 36 36 native 0.0 M 31.7 M 28.7 M 0.606 0.92 0.92 12.19 145 1.18 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f54619b-6955-4b56-b562-5aad5e73112b/@@download/cross_correlation_plot/ENCFF000CLE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAR ENCFF000CLE Illumina Genome Analyzer II 2016-08-20T15:07:50.775102+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byqy7zQ036968qzv81pPKQy4 ENCSR000ARW https://www.encodeproject.org/experiments/ENCSR000ARW "histone,histone modification,broad histone mark" H3K79me2-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF015GYE https://www.encodeproject.org/files/ENCFF015GYE/@@download/ENCFF015GYE.bam ENCFF280FFQ https://www.encodeproject.org/files/ENCFF280FFQ/@@download/ENCFF280FFQ.bam 46.1 M 0 44.7 M 0.969 SE 36 36 native 0.0 M 35.5 M 28.4 M 0.617 0.81 0.81 5.39 145 1.07 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb2f31b3-60a3-48d0-ac4c-688890894d15/@@download/cross_correlation_plot/ENCFF000CLP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKG ENCFF000CLP HiSeq 2000 2016-11-07T03:12:57.364747+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK33003696kxzJj982F2xp ENCSR000ARW https://www.encodeproject.org/experiments/ENCSR000ARW "histone,histone modification,broad histone mark" H3K79me2-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF744PZM https://www.encodeproject.org/files/ENCFF744PZM/@@download/ENCFF744PZM.bam ENCFF688IBO https://www.encodeproject.org/files/ENCFF688IBO/@@download/ENCFF688IBO.bam 5.9 M 0 5.6 M 0.937 SE 36 36 native 0.0 M 4.4 M 4.1 M 0.692 0.93 0.93 14.28 405 1.07 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc196ccc-7539-4e7e-bb37-69627b5d1f3e/@@download/cross_correlation_plot/ENCFF000CLF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOS ENCFF000CLF Illumina Genome Analyzer 2016-11-07T03:11:04.780079+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK37j03696kxzJj982F2y2 ENCSR000APS https://www.encodeproject.org/experiments/ENCSR000APS "histone,histone modification,narrow histone mark" H3K9ac-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF876WZI https://www.encodeproject.org/files/ENCFF876WZI/@@download/ENCFF876WZI.bam ENCFF726FBP https://www.encodeproject.org/files/ENCFF726FBP/@@download/ENCFF726FBP.bam 19.6 M 0 13.3 M 0.681 SE 36 36 native 0.0 M 9.8 M 7.4 M 0.379 0.83 0.83 6.09 175 1.54 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f2ab81e-4c40-4267-8792-124579ed9089/@@download/cross_correlation_plot/ENCFF000CLR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMB ENCFF000CLR Illumina Genome Analyzer IIx 2016-11-07T03:14:56.778116+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJxqj03696Zj590J8YzbZ6 ENCSR000APS https://www.encodeproject.org/experiments/ENCSR000APS "histone,histone modification,narrow histone mark" H3K9ac-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF466YIK https://www.encodeproject.org/files/ENCFF466YIK/@@download/ENCFF466YIK.bam ENCFF361NNQ https://www.encodeproject.org/files/ENCFF361NNQ/@@download/ENCFF361NNQ.bam 44.6 M 0 33.9 M 0.762 SE 36 36 native 0.0 M 26.8 M 15.1 M 0.338 0.60 0.58 2.25 170 1.25 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/34abcc22-8399-4ebd-9bbb-a5ab90ae150a/@@download/cross_correlation_plot/ENCFF000CLU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGD ENCFF000CLU Illumina Genome Analyzer IIx 2016-11-07T03:14:40.573828+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJy0Q03697bbG5kk8621k4 ENCSR000ARX https://www.encodeproject.org/experiments/ENCSR000ARX "histone,histone modification,broad histone mark" H3K9me3-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF506WJB https://www.encodeproject.org/files/ENCFF506WJB/@@download/ENCFF506WJB.bam ENCFF766WYG https://www.encodeproject.org/files/ENCFF766WYG/@@download/ENCFF766WYG.bam 44.2 M 0 43.0 M 0.972 SE 36 36 native 0.0 M 29.6 M 26.3 M 0.594 0.89 0.89 8.98 155 1.02 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/61eef350-2020-49de-8a91-a20786eedb00/@@download/cross_correlation_plot/ENCFF000CKD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACD ENCFF000CKD Illumina Genome Analyzer 2016-11-07T03:17:22.238189+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJpPj036954FbBZ1bGf45k ENCSR000ARX https://www.encodeproject.org/experiments/ENCSR000ARX "histone,histone modification,broad histone mark" H3K9me3-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF530SNB https://www.encodeproject.org/files/ENCFF530SNB/@@download/ENCFF530SNB.bam ENCFF584VOZ https://www.encodeproject.org/files/ENCFF584VOZ/@@download/ENCFF584VOZ.bam 5.9 M 0 5.6 M 0.946 SE 36 36 native 0.0 M 3.7 M 3.6 M 0.607 0.98 0.98 66.39 265 1.02 0.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/3739bdcf-12a8-4413-a7c7-0e34f217de3b/@@download/cross_correlation_plot/ENCFF000CJV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACE ENCFF000CJV Illumina Genome Analyzer 2016-11-07T03:14:59.554693+00:00 released pipeline ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJpgQ03696QVKGb5b1825B ENCSR000ARJ https://www.encodeproject.org/experiments/ENCSR000ARJ "histone,histone modification,broad histone mark" H4K20me1-human fibroblast of dermis primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF050JAL https://www.encodeproject.org/files/ENCFF050JAL/@@download/ENCFF050JAL.bam ENCFF443KCP https://www.encodeproject.org/files/ENCFF443KCP/@@download/ENCFF443KCP.bam 13.3 M 0 9.2 M 0.691 SE 76 76 native 0.0 M 7.9 M 7.7 M 0.585 0.98 0.99 68.24 140 1.02 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/626960dc-f576-4d60-b1ff-c9b6eac220ac/@@download/cross_correlation_plot/ENCFF000CMC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKC ENCFF000CMC Illumina Genome Analyzer 2016-11-11T15:31:12.361137+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfgbQ0369BJY9x58Vj4xfy ENCSR000ARJ https://www.encodeproject.org/experiments/ENCSR000ARJ "histone,histone modification,broad histone mark" H4K20me1-human fibroblast of dermis primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF095UZJ https://www.encodeproject.org/files/ENCFF095UZJ/@@download/ENCFF095UZJ.bam ENCFF869BRE https://www.encodeproject.org/files/ENCFF869BRE/@@download/ENCFF869BRE.bam 5.9 M 0 5.1 M 0.856 SE 36 36 native 0.0 M 3.9 M 3.4 M 0.575 0.88 0.87 7.80 335 1.05 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/efc75f24-a718-4908-9477-40d2c7e8a927/@@download/cross_correlation_plot/ENCFF000CLQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKD ENCFF000CLQ Illumina Genome Analyzer 2016-11-11T15:30:20.567311+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfgpj036935XbqQ06p96Q1 ENCSR000ARJ https://www.encodeproject.org/experiments/ENCSR000ARJ "histone,histone modification,broad histone mark" H4K20me1-human fibroblast of dermis primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF275WIU https://www.encodeproject.org/files/ENCFF275WIU/@@download/ENCFF275WIU.bam ENCFF078BEP https://www.encodeproject.org/files/ENCFF078BEP/@@download/ENCFF078BEP.bam 6.7 M 0 6.4 M 0.955 SE 36 36 native 0.0 M 5.0 M 4.7 M 0.693 0.94 0.94 16.77 265 1.04 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/8c8348e8-3357-4162-a413-07c25281675c/@@download/cross_correlation_plot/ENCFF000CLT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKE ENCFF000CLT Illumina Genome Analyzer 2016-11-11T15:30:17.664513+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfj0Q0369FfP54JvFgg4v8 ENCSR000AMZ https://www.encodeproject.org/experiments/ENCSR000AMZ control Control-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF681UKF https://www.encodeproject.org/files/ENCFF681UKF/@@download/ENCFF681UKF.bam ENCFF007RSP https://www.encodeproject.org/files/ENCFF007RSP/@@download/ENCFF007RSP.bam 11.2 M 0 10.4 M 0.927 SE 36 36 native 0.0 M 7.8 M 7.5 M 0.673 0.97 0.97 34.95 215 1.01 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a83ad76-d0ff-4f86-9d29-8cc0fe82a71a/@@download/cross_correlation_plot/ENCFF000CQP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQE ENCFF000CQP Illumina Genome Analyzer IIe 2016-08-09T15:57:48.013415+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYBkj0369J0Bzfkv2XyxBq ENCSR000AMZ https://www.encodeproject.org/experiments/ENCSR000AMZ control Control-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF386PAD https://www.encodeproject.org/files/ENCFF386PAD/@@download/ENCFF386PAD.bam ENCFF554LJZ https://www.encodeproject.org/files/ENCFF554LJZ/@@download/ENCFF554LJZ.bam 9.4 M 0 4.7 M 0.506 SE 36 36 native 0.0 M 2.7 M 2.5 M 0.269 0.94 0.94 14.60 110 1.02 0.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/0fff5050-7797-491a-905b-35c551f76ef6/@@download/cross_correlation_plot/ENCFF000CQO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQF ENCFF000CQO Illumina Genome Analyzer IIx 2016-08-09T15:57:49.076106+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYBv00369J0Bzfkv2XyxF4 ENCSR000ANO https://www.encodeproject.org/experiments/ENCSR000ANO "transcription factor,RNA binding protein" CTCF-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF892QTE https://www.encodeproject.org/files/ENCFF892QTE/@@download/ENCFF892QTE.bam ENCFF218NGY https://www.encodeproject.org/files/ENCFF218NGY/@@download/ENCFF218NGY.bam 21.6 M 0 16.4 M 0.757 SE 36 36 native 0.0 M 12.0 M 10.6 M 0.490 0.89 0.89 9.48 145 2.34 2.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/535198f5-6a3f-4efa-b921-d3c36aa6e26f/@@download/cross_correlation_plot/ENCFF000CQV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMN ENCFF000CQV Illumina Genome Analyzer IIe 2016-12-11T04:38:38.438112+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165q300369KbxV61z4GFvj5 ENCSR000ANO https://www.encodeproject.org/experiments/ENCSR000ANO "transcription factor,RNA binding protein" CTCF-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF026AUZ https://www.encodeproject.org/files/ENCFF026AUZ/@@download/ENCFF026AUZ.bam ENCFF060JGL https://www.encodeproject.org/files/ENCFF060JGL/@@download/ENCFF060JGL.bam 19.0 M 0 10.5 M 0.551 SE 36 36 native 0.0 M 7.8 M 3.2 M 0.168 0.48 0.48 2.04 145 2.43 2.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/c169c3af-d901-43fa-b538-19d66e540bf1/@@download/cross_correlation_plot/ENCFF000CQU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMO ENCFF000CQU Illumina Genome Analyzer IIe 2016-12-11T04:31:55.606217+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165q800369BJyPz9fb9qYKV ENCSR000ARO https://www.encodeproject.org/experiments/ENCSR000ARO "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF171PUL https://www.encodeproject.org/files/ENCFF171PUL/@@download/ENCFF171PUL.bam ENCFF416DEJ https://www.encodeproject.org/files/ENCFF416DEJ/@@download/ENCFF416DEJ.bam 37.2 M 0 34.4 M 0.925 SE 36 36 native 0.0 M 26.6 M 21.4 M 0.575 0.81 0.81 5.14 130 1.11 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/6076f271-b943-467c-a61e-ac47f049a684/@@download/cross_correlation_plot/ENCFF000CRA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWC ENCFF000CRA Illumina Genome Analyzer IIx 2016-12-11T04:32:37.618903+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165QV00369BgG8x1ygv1XP4 ENCSR000ARO https://www.encodeproject.org/experiments/ENCSR000ARO "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF072QPI https://www.encodeproject.org/files/ENCFF072QPI/@@download/ENCFF072QPI.bam ENCFF277UKB https://www.encodeproject.org/files/ENCFF277UKB/@@download/ENCFF277UKB.bam 41.6 M 0 39.3 M 0.946 SE 36 36 native 0.0 M 29.9 M 26.0 M 0.626 0.88 0.88 8.18 125 1.07 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/1eda8a0b-ff6d-4ee5-bc2c-edf6dbff782e/@@download/cross_correlation_plot/ENCFF000CRB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWB ENCFF000CRB Illumina Genome Analyzer IIx 2016-12-11T04:35:26.578149+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Qf00369B6ZyvJ8yKQXJp ENCSR000ARP https://www.encodeproject.org/experiments/ENCSR000ARP "histone,histone modification,narrow histone mark" H2AFZ-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF750JVH https://www.encodeproject.org/files/ENCFF750JVH/@@download/ENCFF750JVH.bam ENCFF020FOB https://www.encodeproject.org/files/ENCFF020FOB/@@download/ENCFF020FOB.bam 43.0 M 0 42.6 M 0.989 SE 36 36 native 0.0 M 34.4 M 33.7 M 0.782 0.98 0.98 51.58 135 1.12 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd01e62c-7bf0-4688-8bad-d4ee7ffacf04/@@download/cross_correlation_plot/ENCFF000CRG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMX ENCFF000CRG Illumina Genome Analyzer 2016-11-11T15:30:24.438583+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfv8j03698k9bbVGJ8yff7 ENCSR000ARP https://www.encodeproject.org/experiments/ENCSR000ARP "histone,histone modification,narrow histone mark" H2AFZ-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF494JKZ https://www.encodeproject.org/files/ENCFF494JKZ/@@download/ENCFF494JKZ.bam ENCFF630MKA https://www.encodeproject.org/files/ENCFF630MKA/@@download/ENCFF630MKA.bam 39.9 M 0 39.3 M 0.984 SE 36 36 native 0.0 M 31.9 M 31.0 M 0.776 0.97 0.97 36.63 130 1.15 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/e46995c0-7574-431a-976b-39dbfa4d6d21/@@download/cross_correlation_plot/ENCFF000CRH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMW ENCFF000CRH Illumina Genome Analyzer 2016-11-11T15:29:55.462191+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfvJ803698k9bbVGJ8yffP ENCSR000AMR https://www.encodeproject.org/experiments/ENCSR000AMR "histone,histone modification,narrow histone mark" H3K27ac-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF440FYI https://www.encodeproject.org/files/ENCFF440FYI/@@download/ENCFF440FYI.bam ENCFF457PTS https://www.encodeproject.org/files/ENCFF457PTS/@@download/ENCFF457PTS.bam 12.3 M 0 9.4 M 0.760 SE 36 36 native 0.0 M 7.3 M 6.8 M 0.551 0.93 0.94 15.70 185 1.89 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/b32781d5-60fd-4f2b-87f3-150d4290d46a/@@download/cross_correlation_plot/ENCFF000CRV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARI ENCFF000CRV Illumina Genome Analyzer IIe 2016-08-09T15:58:49.954766+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY8Kj0369K6bQZG82k0k8Y ENCSR000AMR https://www.encodeproject.org/experiments/ENCSR000AMR "histone,histone modification,narrow histone mark" H3K27ac-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF071QAT https://www.encodeproject.org/files/ENCFF071QAT/@@download/ENCFF071QAT.bam ENCFF064MWK https://www.encodeproject.org/files/ENCFF064MWK/@@download/ENCFF064MWK.bam 10.2 M 0 9.3 M 0.920 SE 36 36 native 0.0 M 7.7 M 7.3 M 0.720 0.96 0.96 24.54 225 1.29 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcf3d6e7-153b-4d5a-9c6a-7722af447b75/@@download/cross_correlation_plot/ENCFF000CRS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARH ENCFF000CRS Illumina Genome Analyzer IIe 2016-08-09T15:58:44.480652+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY8V803696BF6v1Q3BGK5X ENCSR000AMS https://www.encodeproject.org/experiments/ENCSR000AMS "histone,histone modification,broad histone mark" H3K27me3-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF834MYP https://www.encodeproject.org/files/ENCFF834MYP/@@download/ENCFF834MYP.bam ENCFF179EFW https://www.encodeproject.org/files/ENCFF179EFW/@@download/ENCFF179EFW.bam 10.1 M 0 9.0 M 0.898 SE 36 36 native 0.0 M 7.0 M 6.3 M 0.622 0.91 0.91 10.91 195 1.04 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/734f28c2-451c-417d-9915-6cc11b877c08/@@download/cross_correlation_plot/ENCFF000CRX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACA ENCFF000CRX Illumina Genome Analyzer IIe 2016-11-11T15:28:13.038182+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfvjj03690VBK7Zv5vZG0y ENCSR000AMS https://www.encodeproject.org/experiments/ENCSR000AMS "histone,histone modification,broad histone mark" H3K27me3-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF535LEC https://www.encodeproject.org/files/ENCFF535LEC/@@download/ENCFF535LEC.bam ENCFF096SHY https://www.encodeproject.org/files/ENCFF096SHY/@@download/ENCFF096SHY.bam 14.6 M 0 10.9 M 0.749 SE 36 36 native 0.0 M 7.7 M 7.3 M 0.498 0.95 0.95 18.58 145 1.05 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/b04fc901-8f57-4454-bae4-b5f3a671b11c/@@download/cross_correlation_plot/ENCFF000CSA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANS ENCFF000CSA Illumina Genome Analyzer IIe 2016-11-11T15:28:43.951297+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfvxQ0369JV8BkgQ8xvP7q ENCSR000AMT https://www.encodeproject.org/experiments/ENCSR000AMT "histone,histone modification,broad histone mark" H3K36me3-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF606TSX https://www.encodeproject.org/files/ENCFF606TSX/@@download/ENCFF606TSX.bam ENCFF360TEU https://www.encodeproject.org/files/ENCFF360TEU/@@download/ENCFF360TEU.bam 12.6 M 0 9.9 M 0.787 SE 36 36 native 0.0 M 6.9 M 6.6 M 0.521 0.96 0.96 24.67 150 1.06 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ffeef22-94b1-4182-81e0-100a10264a47/@@download/cross_correlation_plot/ENCFF000CSE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUH ENCFF000CSE Illumina Genome Analyzer IIe 2016-11-11T15:27:45.789353+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfxj00369BZ4kqbvjGpQqk ENCSR000AMT https://www.encodeproject.org/experiments/ENCSR000AMT "histone,histone modification,broad histone mark" H3K36me3-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF658XBJ https://www.encodeproject.org/files/ENCFF658XBJ/@@download/ENCFF658XBJ.bam ENCFF727JWP https://www.encodeproject.org/files/ENCFF727JWP/@@download/ENCFF727JWP.bam 21.5 M 0 18.5 M 0.859 SE 36 36 native 0.0 M 13.5 M 12.5 M 0.583 0.94 0.94 16.49 125 1.06 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b922d45-dccb-4881-93e1-720b2b944f4f/@@download/cross_correlation_plot/ENCFF000CSF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUI ENCFF000CSF Illumina Genome Analyzer IIe 2016-11-11T15:28:35.153029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfxv003698k9bbVGJ8yfgJ ENCSR000AMU https://www.encodeproject.org/experiments/ENCSR000AMU "histone,histone modification,broad histone mark" H3K4me1-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF008NLZ https://www.encodeproject.org/files/ENCFF008NLZ/@@download/ENCFF008NLZ.bam ENCFF347JUF https://www.encodeproject.org/files/ENCFF347JUF/@@download/ENCFF347JUF.bam 19.8 M 0 16.9 M 0.856 SE 36 36 native 0.0 M 13.5 M 12.5 M 0.634 0.94 0.94 15.39 150 1.09 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/25364804-efd6-4552-8943-c5def6ddbcc4/@@download/cross_correlation_plot/ENCFF000CSM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIY ENCFF000CSM Illumina Genome Analyzer IIe 2016-11-11T15:31:38.182518+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfbxj036945pqjGJ4QpPVf ENCSR000AMU https://www.encodeproject.org/experiments/ENCSR000AMU "histone,histone modification,broad histone mark" H3K4me1-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF468DLR https://www.encodeproject.org/files/ENCFF468DLR/@@download/ENCFF468DLR.bam ENCFF473XQA https://www.encodeproject.org/files/ENCFF473XQA/@@download/ENCFF473XQA.bam 7.9 M 0 5.8 M 0.739 SE 36 36 native 0.0 M 4.3 M 4.1 M 0.524 0.96 0.96 23.85 155 1.18 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/9efe2edb-0b7a-4f98-ab50-5f80ed18969f/@@download/cross_correlation_plot/ENCFF000CSJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIZ ENCFF000CSJ Illumina Genome Analyzer IIe 2016-11-11T15:31:24.243560+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xff480369JKzYX9Gzz3B5g ENCSR000AMV https://www.encodeproject.org/experiments/ENCSR000AMV "histone,histone modification,narrow histone mark" H3K4me2-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF301ERB https://www.encodeproject.org/files/ENCFF301ERB/@@download/ENCFF301ERB.bam ENCFF384OPN https://www.encodeproject.org/files/ENCFF384OPN/@@download/ENCFF384OPN.bam 13.9 M 0 10.7 M 0.768 SE 36 36 native 0.0 M 8.3 M 7.8 M 0.559 0.94 0.94 17.08 165 1.38 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bb9d73c-3d5a-42d1-8158-8915e0160dd0/@@download/cross_correlation_plot/ENCFF000CSQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJL ENCFF000CSQ Illumina Genome Analyzer IIe 2016-11-11T15:25:52.661711+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg1GQ0369Fbg36VZ8KyB9P ENCSR000AMV https://www.encodeproject.org/experiments/ENCSR000AMV "histone,histone modification,narrow histone mark" H3K4me2-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF667VOF https://www.encodeproject.org/files/ENCFF667VOF/@@download/ENCFF667VOF.bam ENCFF125JQE https://www.encodeproject.org/files/ENCFF125JQE/@@download/ENCFF125JQE.bam 20.3 M 0 5.2 M 0.255 SE 36 36 native 0.0 M 3.3 M 3.2 M 0.156 0.98 0.98 54.29 125 1.17 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8bdd353-88d6-48e0-bce1-e0a33aed3856/@@download/cross_correlation_plot/ENCFF000CSR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJK ENCFF000CSR Illumina Genome Analyzer IIe 2016-11-11T15:25:58.857516+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg1Q00369K4JbVzZ5F3kp9 ENCSR000AMW https://www.encodeproject.org/experiments/ENCSR000AMW "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF873BGL https://www.encodeproject.org/files/ENCFF873BGL/@@download/ENCFF873BGL.bam ENCFF268EJE https://www.encodeproject.org/files/ENCFF268EJE/@@download/ENCFF268EJE.bam 16.2 M 0 11.9 M 0.738 SE 36 36 native 0.0 M 9.2 M 8.5 M 0.523 0.92 0.93 13.56 165 2.08 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fd6915f-8001-4cb9-ac9b-07d4adcbb299/@@download/cross_correlation_plot/ENCFF000CST.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJO ENCFF000CST Illumina Genome Analyzer IIe 2016-08-20T00:44:08.573109+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZKk80369G3fy7kZ93Gfyy ENCSR000AMW https://www.encodeproject.org/experiments/ENCSR000AMW "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF155AZU https://www.encodeproject.org/files/ENCFF155AZU/@@download/ENCFF155AZU.bam ENCFF555WNG https://www.encodeproject.org/files/ENCFF555WNG/@@download/ENCFF555WNG.bam 26.5 M 0 22.7 M 0.857 SE 36 36 native 0.0 M 16.6 M 15.6 M 0.590 0.95 0.95 20.46 195 1.09 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/3de8caf8-84ec-41df-a10b-ad833a1d8da5/@@download/cross_correlation_plot/ENCFF000CSY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJN ENCFF000CSY Illumina Genome Analyzer IIx 2016-08-20T00:46:36.149952+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZKqj0369G3fy7kZ93Gfz6 ENCSR915QOL https://www.encodeproject.org/experiments/ENCSR915QOL "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF316LJR https://www.encodeproject.org/files/ENCFF316LJR/@@download/ENCFF316LJR.bam ENCFF288HFB https://www.encodeproject.org/files/ENCFF288HFB/@@download/ENCFF288HFB.bam 46.6 M 0 45.7 M 0.981 SE 36 36 native 0.0 M 35.7 M 33.9 M 0.728 0.95 0.95 20.40 265 1.04 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9c49d1a-0f4f-4035-a659-d2e854af3a74/@@download/cross_correlation_plot/ENCFF238HDJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB051ILC bradley-bernstein:DNA_Lib 4584 ENCFF238HDJ HiSeq 2500 2016-11-15T18:23:02.560278+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b4PGQ03696q4yFJZ9QQYv0 ENCSR915QOL https://www.encodeproject.org/experiments/ENCSR915QOL "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF358HBR https://www.encodeproject.org/files/ENCFF358HBR/@@download/ENCFF358HBR.bam ENCFF330JML https://www.encodeproject.org/files/ENCFF330JML/@@download/ENCFF330JML.bam 52.3 M 0 51.2 M 0.978 SE 76 36 36 0.0 M 41.9 M 37.3 M 0.713 0.89 0.89 9.42 185 1.30 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b17ffad-2509-44b8-9ed0-5b4e5165b409/@@download/cross_correlation_plot/ENCFF612NOM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB713YOY bradley-bernstein:DNA_Lib 6093 ENCFF612NOM HiSeq 2500 2016-11-15T23:51:24.923504+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bb9g003691jKGBVGv908Zq ENCSR000ASF https://www.encodeproject.org/experiments/ENCSR000ASF "histone,histone modification,broad histone mark" H3K79me2-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF649JWQ https://www.encodeproject.org/files/ENCFF649JWQ/@@download/ENCFF649JWQ.bam ENCFF623IPE https://www.encodeproject.org/files/ENCFF623IPE/@@download/ENCFF623IPE.bam 35.3 M 0 35.0 M 0.992 SE 36 36 native 0.0 M 27.7 M 26.5 M 0.750 0.96 0.96 24.76 130 1.14 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/82e057a7-7e66-4d5c-80b9-7330fbf7ea77/@@download/cross_correlation_plot/ENCFF000CTG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANJ ENCFF000CTG Illumina Genome Analyzer 2016-11-11T15:30:21.363703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfkYQ0369JKzYX9Gzz3B6q ENCSR000ASF https://www.encodeproject.org/experiments/ENCSR000ASF "histone,histone modification,broad histone mark" H3K79me2-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF882JAM https://www.encodeproject.org/files/ENCFF882JAM/@@download/ENCFF882JAM.bam ENCFF097MEA https://www.encodeproject.org/files/ENCFF097MEA/@@download/ENCFF097MEA.bam 37.5 M 0 36.7 M 0.979 SE 36 36 native 0.0 M 29.2 M 24.3 M 0.649 0.84 0.84 6.17 110 1.12 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/559667e6-499d-4273-bd3d-da893b279137/@@download/cross_correlation_plot/ENCFF000CTH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANK ENCFF000CTH Illumina Genome Analyzer 2016-11-11T15:30:52.590989+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfkk003698k9bbVGJ8yfb4 ENCSR000AMX https://www.encodeproject.org/experiments/ENCSR000AMX "histone,histone modification,narrow histone mark" H3K9ac-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF456CSQ https://www.encodeproject.org/files/ENCFF456CSQ/@@download/ENCFF456CSQ.bam ENCFF173TMY https://www.encodeproject.org/files/ENCFF173TMY/@@download/ENCFF173TMY.bam 8.9 M 0 7.4 M 0.832 SE 36 36 native 0.0 M 5.6 M 5.3 M 0.593 0.94 0.94 16.33 150 1.37 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/c05ae3fd-5335-4e9b-b804-9f02cd4218c5/@@download/cross_correlation_plot/ENCFF000CTF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAY ENCFF000CTF Illumina Genome Analyzer IIe 2016-11-11T15:27:05.677716+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg0F0036953q5qVQkfJggy ENCSR000AMX https://www.encodeproject.org/experiments/ENCSR000AMX "histone,histone modification,narrow histone mark" H3K9ac-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF106YJX https://www.encodeproject.org/files/ENCFF106YJX/@@download/ENCFF106YJX.bam ENCFF649LIJ https://www.encodeproject.org/files/ENCFF649LIJ/@@download/ENCFF649LIJ.bam 18.4 M 0 12.2 M 0.664 SE 36 36 native 0.0 M 9.3 M 7.9 M 0.432 0.90 0.90 9.85 130 1.64 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/265433c7-41f5-48ce-a020-9f5100a725bc/@@download/cross_correlation_plot/ENCFF000CTI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAX ENCFF000CTI Illumina Genome Analyzer IIe 2016-11-11T15:27:20.230841+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg0P003696BZZPjG1pqvp2 ENCSR000ARQ https://www.encodeproject.org/experiments/ENCSR000ARQ "histone,histone modification,broad histone mark" H3K9me3-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF306YKM https://www.encodeproject.org/files/ENCFF306YKM/@@download/ENCFF306YKM.bam ENCFF628ZAE https://www.encodeproject.org/files/ENCFF628ZAE/@@download/ENCFF628ZAE.bam 34.3 M 0 33.4 M 0.974 SE 36 36 native 0.0 M 22.5 M 22.3 M 0.650 0.99 0.99 106.49 125 1.02 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bef6796-b62c-4f0a-a6a3-d00a642fe2cd/@@download/cross_correlation_plot/ENCFF000CRN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALI ENCFF000CRN Illumina Genome Analyzer IIx 2016-11-11T15:29:30.526747+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfx3803698k9bbVGJ8yfg1 ENCSR000ARQ https://www.encodeproject.org/experiments/ENCSR000ARQ "histone,histone modification,broad histone mark" H3K9me3-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF398RMY https://www.encodeproject.org/files/ENCFF398RMY/@@download/ENCFF398RMY.bam ENCFF279JVA https://www.encodeproject.org/files/ENCFF279JVA/@@download/ENCFF279JVA.bam 44.3 M 0 43.5 M 0.982 SE 36 36 native 0.0 M 29.1 M 28.6 M 0.645 0.98 0.99 68.88 120 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/907f7250-3fb2-40ed-bbab-80ad45f1ee84/@@download/cross_correlation_plot/ENCFF000CRP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALH ENCFF000CRP Illumina Genome Analyzer IIx 2016-11-11T15:29:43.981546+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfx7j0369K4JbVzZ5F3kkX ENCSR000AMY https://www.encodeproject.org/experiments/ENCSR000AMY "histone,histone modification,broad histone mark" H4K20me1-human fibroblast of lung primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF694XPD https://www.encodeproject.org/files/ENCFF694XPD/@@download/ENCFF694XPD.bam ENCFF359ALC https://www.encodeproject.org/files/ENCFF359ALC/@@download/ENCFF359ALC.bam 16.1 M 0 9.4 M 0.581 SE 36 36 native 0.0 M 6.1 M 6.0 M 0.371 0.98 0.98 47.93 120 1.02 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3b57fbc-a9c9-4486-a2f7-dc5f3e693738/@@download/cross_correlation_plot/ENCFF000CTO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWQ ENCFF000CTO Illumina Genome Analyzer II 2016-11-11T15:25:33.999527+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg26j036945J1QPjf6ZKyB ENCSR000AMY https://www.encodeproject.org/experiments/ENCSR000AMY "histone,histone modification,broad histone mark" H4K20me1-human fibroblast of lung primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF287EEC https://www.encodeproject.org/files/ENCFF287EEC/@@download/ENCFF287EEC.bam ENCFF539CXP https://www.encodeproject.org/files/ENCFF539CXP/@@download/ENCFF539CXP.bam 17.0 M 0 4.8 M 0.282 SE 36 36 native 0.0 M 2.8 M 2.7 M 0.159 0.97 0.97 35.29 130 1.06 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f788ac1-05a8-4066-96c5-08007c433a7b/@@download/cross_correlation_plot/ENCFF000CTT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWP ENCFF000CTT Illumina Genome Analyzer IIe 2016-11-11T15:25:23.246820+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg2BQ036984XkYP1yq4VV4 ENCSR001UFN https://www.encodeproject.org/experiments/ENCSR001UFN control Control-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF736RVR https://www.encodeproject.org/files/ENCFF736RVR/@@download/ENCFF736RVR.bam ENCFF164QLT https://www.encodeproject.org/files/ENCFF164QLT/@@download/ENCFF164QLT.bam 60.3 M 0 58.6 M 0.972 SE 76 76 native 0.0 M 52.0 M 50.0 M 0.830 0.97 0.97 39.85 540 1.00 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/5cadce5b-8a21-4cad-9b4d-cfb0104a4c64/@@download/cross_correlation_plot/ENCFF691QIG-ENCFF865BLC-ENCFF598YFV-ENCFF249UEG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB592NMU bradley-bernstein:DNA_Lib 8227 "ENCFF865BLC,ENCFF598YFV,ENCFF249UEG,ENCFF691QIG" HiSeq 2500 2016-10-27T22:03:42.780812+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091X0003694VvqYvxK23FvY ENCSR775IMI https://www.encodeproject.org/experiments/ENCSR775IMI control Control-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF634UHG https://www.encodeproject.org/files/ENCFF634UHG/@@download/ENCFF634UHG.bam ENCFF599VSB https://www.encodeproject.org/files/ENCFF599VSB/@@download/ENCFF599VSB.bam 77.7 M 0 75.5 M 0.971 SE 76 76 native 0.0 M 66.4 M 46.8 M 0.602 0.71 0.69 3.04 200 1.01 3.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/79bf7546-2596-4a55-a69d-270532bfdd4a/@@download/cross_correlation_plot/ENCFF297UFN-ENCFF265JXW-ENCFF437OBX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB112SSV bradley-bernstein:DNA_Lib 7386 "ENCFF437OBX,ENCFF265JXW,ENCFF297UFN" HiSeq 2500 2017-02-03T16:03:18.869704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F29vVV803698Y174Fz56XJYB ENCSR897RRA https://www.encodeproject.org/experiments/ENCSR897RRA control Control-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF302HIW https://www.encodeproject.org/files/ENCFF302HIW/@@download/ENCFF302HIW.bam ENCFF494MEJ https://www.encodeproject.org/files/ENCFF494MEJ/@@download/ENCFF494MEJ.bam 70.2 M 0 68.1 M 0.970 SE "76,72" 72 native 0.0 M 59.5 M 41.4 M 0.590 0.83 0.83 5.53 170 1.03 3.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/92903a06-58a0-46fe-81b8-b35ef15e92ae/@@download/cross_correlation_plot/ENCFF321CPH-ENCFF360DUF-ENCFF566VUE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB395SIR bradley-bernstein:DNA_Lib 7701 "ENCFF360DUF,ENCFF566VUE,ENCFF321CPH" HiSeq 2500 2016-10-26T20:59:35.780928+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08J2gQ03691PG1GVbF47V0p ENCSR897RRA https://www.encodeproject.org/experiments/ENCSR897RRA control Control-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF287TUT https://www.encodeproject.org/files/ENCFF287TUT/@@download/ENCFF287TUT.bam ENCFF693DSK https://www.encodeproject.org/files/ENCFF693DSK/@@download/ENCFF693DSK.bam 54.1 M 0 51.8 M 0.958 SE 76 76 native 0.0 M 45.1 M 42.7 M 0.790 0.97 0.97 34.13 180 1.00 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/34def963-c730-440c-92af-41938a6d5800/@@download/cross_correlation_plot/ENCFF498FZT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB026PVO bradley-bernstein:DNA_Lib 7709 ENCFF498FZT HiSeq 2500 2016-10-26T20:58:28.554635+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08GzBj03695140QP5B2vpv9 ENCSR736ALU https://www.encodeproject.org/experiments/ENCSR736ALU "histone,histone modification,narrow histone mark" H3K27ac-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF829OGO https://www.encodeproject.org/files/ENCFF829OGO/@@download/ENCFF829OGO.bam ENCFF563RDM https://www.encodeproject.org/files/ENCFF563RDM/@@download/ENCFF563RDM.bam 31.1 M 0 30.0 M 0.963 SE 76 76 native 0.0 M 28.0 M 26.3 M 0.844 0.94 0.94 17.73 215 1.29 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec0520d1-aef7-45d3-ac20-574435c03033/@@download/cross_correlation_plot/ENCFF789APL-ENCFF184LPK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB820SST bradley-bernstein:DNA_Lib 8066 "ENCFF789APL,ENCFF184LPK" HiSeq 2500 2016-10-31T13:23:40.748343+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8gVQ036923pJJqk9y0Qg3 ENCSR736ALU https://www.encodeproject.org/experiments/ENCSR736ALU "histone,histone modification,narrow histone mark" H3K27ac-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF527YUB https://www.encodeproject.org/files/ENCFF527YUB/@@download/ENCFF527YUB.bam ENCFF815DGZ https://www.encodeproject.org/files/ENCFF815DGZ/@@download/ENCFF815DGZ.bam 28.9 M 0 28.4 M 0.983 SE 76 76 native 0.0 M 26.8 M 25.3 M 0.875 0.94 0.94 18.40 205 1.24 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/57814d92-2d09-450f-a643-6cfb49359cbf/@@download/cross_correlation_plot/ENCFF707VEV-ENCFF298AKE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB355NZH bradley-bernstein:DNA_Lib 8305 "ENCFF298AKE,ENCFF707VEV" HiSeq 2500 2017-01-25T20:33:23.909275+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24GKFj03693K5xJ8f7yzyyZ ENCSR801IPH https://www.encodeproject.org/experiments/ENCSR801IPH "histone,histone modification,narrow histone mark" H3K27ac-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF025FAP https://www.encodeproject.org/files/ENCFF025FAP/@@download/ENCFF025FAP.bam ENCFF584JVS https://www.encodeproject.org/files/ENCFF584JVS/@@download/ENCFF584JVS.bam 136.9 M 0 133.3 M 0.974 SE 76 76 native 0.0 M 125.5 M 66.1 M 0.483 0.53 0.58 2.79 200 1.17 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/580e4fe4-5d32-406a-a266-00920ce978dd/@@download/cross_correlation_plot/ENCFF596HQA-ENCFF898WVK-ENCFF404QLW-ENCFF391EOT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB586UIH,ENCLB406RQW,ENCLB614VQS,ENCLB685HWU" "bradley-bernstein:DNA_Lib 7767,bradley-bernstein:DNA_Lib 7390,bradley-bernstein:DNA_Lib 7365,bradley-bernstein:DNA_Lib 7769" "ENCFF596HQA,ENCFF404QLW,ENCFF391EOT,ENCFF898WVK" HiSeq 2500 2016-08-09T16:55:52.284939+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV64j03690qf1GGj2xqpQ2 ENCSR801IPH https://www.encodeproject.org/experiments/ENCSR801IPH "histone,histone modification,narrow histone mark" H3K27ac-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF409ZYH https://www.encodeproject.org/files/ENCFF409ZYH/@@download/ENCFF409ZYH.bam ENCFF018YLH https://www.encodeproject.org/files/ENCFF018YLH/@@download/ENCFF018YLH.bam 81.5 M 0 79.2 M 0.971 SE 76 76 native 0.0 M 73.9 M 61.8 M 0.758 0.84 0.85 6.92 230 1.16 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/9eb389f0-2359-45a1-829f-7aa53187990c/@@download/cross_correlation_plot/ENCFF777GCN-ENCFF175LIK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB321HZV,ENCLB016BJY" "bradley-bernstein:DNA_Lib 7510,bradley-bernstein:DNA_Lib 7786" "ENCFF175LIK,ENCFF777GCN" HiSeq 2500 2016-08-09T16:54:18.506330+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV67j0369GFvV7jG2Q3FGv ENCSR948YYZ https://www.encodeproject.org/experiments/ENCSR948YYZ "histone,histone modification,narrow histone mark" H3K27ac-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF405TRE https://www.encodeproject.org/files/ENCFF405TRE/@@download/ENCFF405TRE.bam ENCFF950THC https://www.encodeproject.org/files/ENCFF950THC/@@download/ENCFF950THC.bam 36.2 M 0 35.6 M 0.983 SE 76 None 0.0 M 33.6 M 31.1 M 0.857 0.93 0.93 14.27 230 1.19 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/26b21d93-7801-40b7-8579-28b3b377023f/@@download/cross_correlation_plot/ENCFF454TGL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB721GZX bradley-bernstein:DNA_Lib 7694 ENCFF454TGL HiSeq 2500 2016-06-14T05:40:47.051530+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZvvj036904gYJx0Q1KzYj ENCSR948YYZ https://www.encodeproject.org/experiments/ENCSR948YYZ "histone,histone modification,narrow histone mark" H3K27ac-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF258BZL https://www.encodeproject.org/files/ENCFF258BZL/@@download/ENCFF258BZL.bam ENCFF845IJH https://www.encodeproject.org/files/ENCFF845IJH/@@download/ENCFF845IJH.bam 46.8 M 0 45.3 M 0.967 SE 76 None 0.0 M 42.6 M 37.8 M 0.807 0.89 0.89 9.58 195 1.27 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/8456f848-5205-4fb5-a3d1-65f10e883b37/@@download/cross_correlation_plot/ENCFF325UXV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB295VCL bradley-bernstein:DNA_Lib 7707 ENCFF325UXV HiSeq 2500 2016-06-14T05:40:58.202637+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZvz803692Y2bVf1QGK0Qk ENCSR201OSX https://www.encodeproject.org/experiments/ENCSR201OSX "histone,histone modification,broad histone mark" H3K27me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF633HJH https://www.encodeproject.org/files/ENCFF633HJH/@@download/ENCFF633HJH.bam ENCFF367BUY https://www.encodeproject.org/files/ENCFF367BUY/@@download/ENCFF367BUY.bam 83.0 M 0 80.3 M 0.968 SE 76 76 native 0.0 M 69.7 M 67.0 M 0.807 0.96 0.96 27.78 210 1.00 0.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3a6af4a-ef47-4826-97d6-df571b1db1e6/@@download/cross_correlation_plot/ENCFF387ZXK-ENCFF636NLM-ENCFF531NRI-ENCFF550EGJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB027ICU bradley-bernstein:DNA_Lib 8306 "ENCFF387ZXK,ENCFF636NLM,ENCFF550EGJ,ENCFF531NRI" HiSeq 2500 2017-01-25T07:34:55.069648+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2412J00369G5q008pbX84bj ENCSR423LXQ https://www.encodeproject.org/experiments/ENCSR423LXQ "histone,histone modification,broad histone mark" H3K27me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF650KVU https://www.encodeproject.org/files/ENCFF650KVU/@@download/ENCFF650KVU.bam ENCFF766QUI https://www.encodeproject.org/files/ENCFF766QUI/@@download/ENCFF766QUI.bam 48.1 M 0 46.7 M 0.971 SE 76 76 native 0.0 M 41.0 M 31.1 M 0.647 0.76 0.75 3.84 215 1.02 3.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/08cf93ed-8ac3-4409-a7e5-69e1699cc708/@@download/cross_correlation_plot/ENCFF112QPL-ENCFF977XYB-ENCFF888MPQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB112UVM bradley-bernstein:DNA_Lib 7690 "ENCFF977XYB,ENCFF888MPQ,ENCFF112QPL" HiSeq 2500 2017-01-27T17:04:06.851510+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25K4j803690vp9f14546fj9 ENCSR519WQH https://www.encodeproject.org/experiments/ENCSR519WQH "histone,histone modification,broad histone mark" H3K27me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF144WWG https://www.encodeproject.org/files/ENCFF144WWG/@@download/ENCFF144WWG.bam ENCFF806EQY https://www.encodeproject.org/files/ENCFF806EQY/@@download/ENCFF806EQY.bam 91.9 M 0 88.9 M 0.967 SE 76 76 native 0.0 M 77.8 M 52.0 M 0.567 0.67 0.65 2.70 205 1.01 4.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/429337b6-6de7-4d8c-bbc8-fe96c98089d6/@@download/cross_correlation_plot/ENCFF143UPY-ENCFF136SMN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB846ONM bradley-bernstein:DNA_Lib 7509 "ENCFF143UPY,ENCFF136SMN" HiSeq 2500 2017-02-04T05:14:34.019319+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BGX8j03698Y174Fz56XVY9 ENCSR519WQH https://www.encodeproject.org/experiments/ENCSR519WQH "histone,histone modification,broad histone mark" H3K27me3-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF234GEW https://www.encodeproject.org/files/ENCFF234GEW/@@download/ENCFF234GEW.bam ENCFF434IST https://www.encodeproject.org/files/ENCFF434IST/@@download/ENCFF434IST.bam 87.2 M 0 84.2 M 0.966 SE 76 76 native 0.0 M 73.7 M 46.1 M 0.529 0.63 0.60 2.35 170 1.01 2.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d32271e-7257-45ad-82cb-5aebb4750187/@@download/cross_correlation_plot/ENCFF149ARH-ENCFF679SJH-ENCFF528IOQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB056SKS bradley-bernstein:DNA_Lib 7364 "ENCFF679SJH,ENCFF149ARH,ENCFF528IOQ" HiSeq 2500 2017-02-04T05:16:12.662757+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BGXVQ0369348QfFzJqXKj6 ENCSR101NFY https://www.encodeproject.org/experiments/ENCSR101NFY "histone,histone modification,broad histone mark" H3K36me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF438UAX https://www.encodeproject.org/files/ENCFF438UAX/@@download/ENCFF438UAX.bam ENCFF443EHK https://www.encodeproject.org/files/ENCFF443EHK/@@download/ENCFF443EHK.bam 85.3 M 0 82.6 M 0.968 SE 76 76 native 0.0 M 73.1 M 69.4 M 0.813 0.95 0.95 21.37 90 1.00 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e4be99c-83a8-4399-a177-d7b88f467c5f/@@download/cross_correlation_plot/ENCFF936AJV-ENCFF565IFM-ENCFF133PPV-ENCFF583HVR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB616PJK bradley-bernstein:DNA_Lib 8307 "ENCFF133PPV,ENCFF583HVR,ENCFF565IFM,ENCFF936AJV" HiSeq 2500 2017-01-25T07:48:26.930820+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2413BQ03695KX5x274GxJFK ENCSR105YNJ https://www.encodeproject.org/experiments/ENCSR105YNJ "histone,histone modification,broad histone mark" H3K36me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF930OAT https://www.encodeproject.org/files/ENCFF930OAT/@@download/ENCFF930OAT.bam ENCFF137DOU https://www.encodeproject.org/files/ENCFF137DOU/@@download/ENCFF137DOU.bam 45.0 M 0 43.0 M 0.955 SE 76 None 0.0 M 37.8 M 34.6 M 0.768 0.92 0.92 11.77 180 1.01 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/3031cd27-94a7-4bae-bb44-9c7aa8bcfd71/@@download/cross_correlation_plot/ENCFF054LSK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB218LEF bradley-bernstein:DNA_Lib 7708 ENCFF054LSK HiSeq 2500 2016-06-14T05:40:59.474628+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZvgj036904gYJx0Q1KzY6 ENCSR105YNJ https://www.encodeproject.org/experiments/ENCSR105YNJ "histone,histone modification,broad histone mark" H3K36me3-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF917WHC https://www.encodeproject.org/files/ENCFF917WHC/@@download/ENCFF917WHC.bam ENCFF720LZH https://www.encodeproject.org/files/ENCFF720LZH/@@download/ENCFF720LZH.bam 26.2 M 0 25.6 M 0.977 SE 76 None 0.0 M 22.6 M 21.7 M 0.827 0.96 0.96 24.95 210 1.01 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9dda211-5ade-4b66-8bd4-bf913fc0698a/@@download/cross_correlation_plot/ENCFF940VTW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB019XYQ bradley-bernstein:DNA_Lib 7695 ENCFF940VTW HiSeq 2500 2016-06-14T05:40:17.146915+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZvp003692Y2bVf1QGK0Q7 ENCSR380KNE https://www.encodeproject.org/experiments/ENCSR380KNE "histone,histone modification,broad histone mark" H3K36me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF700XLJ https://www.encodeproject.org/files/ENCFF700XLJ/@@download/ENCFF700XLJ.bam ENCFF337VMP https://www.encodeproject.org/files/ENCFF337VMP/@@download/ENCFF337VMP.bam 160.1 M 0 154.4 M 0.964 SE 76 76 native 0.0 M 134.6 M 104.9 M 0.655 0.78 0.79 4.89 195 1.00 14.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/b874bf11-8405-4d60-a40c-b78fd0b86142/@@download/cross_correlation_plot/ENCFF604AHS-ENCFF021VWZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB769OFX,ENCLB949DXQ" "bradley-bernstein:DNA_Lib 7508,bradley-bernstein:DNA_Lib 7785" "ENCFF021VWZ,ENCFF604AHS" HiSeq 2500 2016-10-26T19:44:08.404456+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0842xj0369JgG4ppJK6p799 ENCSR380KNE https://www.encodeproject.org/experiments/ENCSR380KNE "histone,histone modification,broad histone mark" H3K36me3-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF142KZT https://www.encodeproject.org/files/ENCFF142KZT/@@download/ENCFF142KZT.bam ENCFF957EXS https://www.encodeproject.org/files/ENCFF957EXS/@@download/ENCFF957EXS.bam 95.3 M 0 91.6 M 0.962 SE 76 76 native 0.0 M 80.5 M 33.4 M 0.350 0.42 0.35 1.32 175 1.01 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/14628660-50fc-442e-9764-95f595ffed00/@@download/cross_correlation_plot/ENCFF513PYY-ENCFF041PAU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB523JHM,ENCLB177HSL" "bradley-bernstein:DNA_Lib 7768,bradley-bernstein:DNA_Lib 7366" "ENCFF513PYY,ENCFF041PAU" HiSeq 2500 2016-10-26T19:36:34.709314+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F084318036923pJJqk9xzZ65 ENCSR148FWR https://www.encodeproject.org/experiments/ENCSR148FWR "histone,histone modification,broad histone mark" H3K4me1-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF234EOK https://www.encodeproject.org/files/ENCFF234EOK/@@download/ENCFF234EOK.bam ENCFF998MMC https://www.encodeproject.org/files/ENCFF998MMC/@@download/ENCFF998MMC.bam 68.4 M 0 66.3 M 0.970 SE 76 76 native 0.0 M 61.1 M 50.5 M 0.738 0.83 0.82 5.49 185 1.03 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/321e8b5e-2edc-41cb-895b-4cd7339507ac/@@download/cross_correlation_plot/ENCFF627SUW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB406STF bradley-bernstein:DNA_Lib 7362 ENCFF627SUW HiSeq 2500 2016-08-09T16:54:02.326882+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV6P003692zxj1pQ2ky7Zf ENCSR161HZJ https://www.encodeproject.org/experiments/ENCSR161HZJ "histone,histone modification,broad histone mark" H3K4me1-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF795NRD https://www.encodeproject.org/files/ENCFF795NRD/@@download/ENCFF795NRD.bam ENCFF183DJC https://www.encodeproject.org/files/ENCFF183DJC/@@download/ENCFF183DJC.bam 22.0 M 0 21.6 M 0.982 SE 76 None 0.0 M 20.1 M 18.4 M 0.837 0.92 0.92 12.12 240 1.04 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/cdc67818-b857-4236-8bc5-b9d7d9b06c0e/@@download/cross_correlation_plot/ENCFF454ASR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB027VNS bradley-bernstein:DNA_Lib 7692 ENCFF454ASR HiSeq 2500 2016-06-14T05:40:09.758046+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZvXj0369GP5gb3GQpQ8p2 ENCSR161HZJ https://www.encodeproject.org/experiments/ENCSR161HZJ "histone,histone modification,broad histone mark" H3K4me1-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF415IZJ https://www.encodeproject.org/files/ENCFF415IZJ/@@download/ENCFF415IZJ.bam ENCFF803AKB https://www.encodeproject.org/files/ENCFF803AKB/@@download/ENCFF803AKB.bam 40.6 M 0 39.2 M 0.965 SE 76 None 0.0 M 36.2 M 32.9 M 0.810 0.91 0.91 10.86 195 1.03 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/a285ea43-ca87-4e41-89f7-07e33593ebbb/@@download/cross_correlation_plot/ENCFF517MYS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB843GIW bradley-bernstein:DNA_Lib 7705 ENCFF517MYS HiSeq 2500 2016-06-14T05:40:56.927982+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZvb00369B0QYY1QQXVfB4 ENCSR776EAH https://www.encodeproject.org/experiments/ENCSR776EAH "histone,histone modification,broad histone mark" H3K4me1-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF107CVP https://www.encodeproject.org/files/ENCFF107CVP/@@download/ENCFF107CVP.bam ENCFF787CAM https://www.encodeproject.org/files/ENCFF787CAM/@@download/ENCFF787CAM.bam 67.8 M 0 66.3 M 0.978 SE 76 76 native 0.0 M 61.1 M 53.5 M 0.789 0.88 0.88 7.91 215 1.02 2.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e0faff2-edb1-4a99-b564-c6f1407ef128/@@download/cross_correlation_plot/ENCFF267QBK-ENCFF807XWS-ENCFF815DIH-ENCFF720DHM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB566MIR bradley-bernstein:DNA_Lib 8308 "ENCFF267QBK,ENCFF815DIH,ENCFF807XWS,ENCFF720DHM" HiSeq 2500 2017-01-25T06:48:33.801365+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2411Z80369G5q008pbX84b6 ENCSR206STN https://www.encodeproject.org/experiments/ENCSR206STN "histone,histone modification,narrow histone mark" H3K4me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF382SKJ https://www.encodeproject.org/files/ENCFF382SKJ/@@download/ENCFF382SKJ.bam ENCFF126LRA https://www.encodeproject.org/files/ENCFF126LRA/@@download/ENCFF126LRA.bam 69.6 M 0 67.5 M 0.969 SE 76 76 native 0.0 M 59.9 M 54.0 M 0.775 0.90 0.91 11.26 260 1.13 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/13578bef-d383-46e8-927e-ca3ef5727627/@@download/cross_correlation_plot/ENCFF958GEP-ENCFF427SMR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB793PYA,ENCLB151TWB" "bradley-bernstein:DNA_Lib 7499,bradley-bernstein:DNA_Lib 7777" "ENCFF958GEP,ENCFF427SMR" HiSeq 2500 2017-02-06T00:27:55.924266+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BfKkQ03696kqfy5v2b9G1Y ENCSR206STN https://www.encodeproject.org/experiments/ENCSR206STN "histone,histone modification,narrow histone mark" H3K4me3-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF022MAK https://www.encodeproject.org/files/ENCFF022MAK/@@download/ENCFF022MAK.bam ENCFF332FBJ https://www.encodeproject.org/files/ENCFF332FBJ/@@download/ENCFF332FBJ.bam 68.9 M 0 66.9 M 0.970 SE 76 76 native 0.0 M 59.1 M 53.8 M 0.780 0.91 0.92 11.96 225 1.04 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/0633f5b6-ea07-41d9-abd8-dee601c63d12/@@download/cross_correlation_plot/ENCFF521DNR-ENCFF949RTK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB737OGT,ENCLB970DHJ" "bradley-bernstein:DNA_Lib 7501,bradley-bernstein:DNA_Lib 7779" "ENCFF521DNR,ENCFF949RTK" HiSeq 2500 2017-02-06T00:31:55.194487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BfZXj0369BG639BVQz09vv ENCSR785DJD https://www.encodeproject.org/experiments/ENCSR785DJD "histone,histone modification,narrow histone mark" H3K4me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF924SMA https://www.encodeproject.org/files/ENCFF924SMA/@@download/ENCFF924SMA.bam ENCFF596ZLO https://www.encodeproject.org/files/ENCFF596ZLO/@@download/ENCFF596ZLO.bam 29.9 M 0 29.1 M 0.971 SE 76 76 native 0.0 M 26.7 M 24.0 M 0.804 0.90 0.91 11.01 200 1.66 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/92fb5427-796f-4d32-a133-d9a1237e27c6/@@download/cross_correlation_plot/ENCFF437WNR-ENCFF132HMZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB797RDW bradley-bernstein:DNA_Lib 8304 "ENCFF132HMZ,ENCFF437WNR" HiSeq 2500 2017-01-25T03:11:08.488567+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23yjQQ036937yFgPVXB70Zq ENCSR972ETR https://www.encodeproject.org/experiments/ENCSR972ETR "histone,histone modification,narrow histone mark" H3K4me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF925OTX https://www.encodeproject.org/files/ENCFF925OTX/@@download/ENCFF925OTX.bam ENCFF230JIL https://www.encodeproject.org/files/ENCFF230JIL/@@download/ENCFF230JIL.bam 52.8 M 0 50.5 M 0.956 SE 76 None 0.0 M 43.2 M 39.2 M 0.744 0.91 0.91 11.21 195 1.08 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/138e7e69-ec93-440d-9dc0-e12eb06fb3dc/@@download/cross_correlation_plot/ENCFF451FXP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB492EUL bradley-bernstein:DNA_Lib 7706 ENCFF451FXP HiSeq 2500 2016-06-14T05:41:21.579877+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZv60036904gYJx0Q1KzX3 ENCSR972ETR https://www.encodeproject.org/experiments/ENCSR972ETR "histone,histone modification,narrow histone mark" H3K4me3-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF932KMM https://www.encodeproject.org/files/ENCFF932KMM/@@download/ENCFF932KMM.bam ENCFF492EPC https://www.encodeproject.org/files/ENCFF492EPC/@@download/ENCFF492EPC.bam 39.3 M 0 38.0 M 0.967 SE 76 76 native 0.0 M 32.6 M 29.1 M 0.741 0.89 0.90 9.50 220 1.05 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4f7b9e0-02a4-47f1-87ea-323b662b3856/@@download/cross_correlation_plot/ENCFF804KXD-ENCFF881YAW-ENCFF020IHJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB772GCV bradley-bernstein:DNA_Lib 7693 "ENCFF804KXD,ENCFF881YAW,ENCFF020IHJ" HiSeq 2500 2016-10-26T20:56:26.842776+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08J2vQ0369BX1xqb1B80GzF ENCSR697RIW https://www.encodeproject.org/experiments/ENCSR697RIW "histone,histone modification,broad histone mark" H3K9me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF698ALW https://www.encodeproject.org/files/ENCFF698ALW/@@download/ENCFF698ALW.bam ENCFF298PEP https://www.encodeproject.org/files/ENCFF298PEP/@@download/ENCFF298PEP.bam 30.4 M 0 29.2 M 0.963 SE 76 None 0.0 M 23.3 M 22.2 M 0.733 0.96 0.96 28.03 185 1.01 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/6af4ed75-51e5-4249-aba3-e52e9af1337d/@@download/cross_correlation_plot/ENCFF211LVY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB561YSN bradley-bernstein:DNA_Lib 7691 ENCFF211LVY HiSeq 2500 2016-06-14T05:40:26.198845+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZvF803692Y2bVf1QGK0PB ENCSR697RIW https://www.encodeproject.org/experiments/ENCSR697RIW "histone,histone modification,broad histone mark" H3K9me3-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF635GWY https://www.encodeproject.org/files/ENCFF635GWY/@@download/ENCFF635GWY.bam ENCFF292RGS https://www.encodeproject.org/files/ENCFF292RGS/@@download/ENCFF292RGS.bam 48.3 M 0 45.4 M 0.940 SE 76 None 0.0 M 35.6 M 30.2 M 0.625 0.85 0.85 6.57 220 1.01 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/40bb6360-ec14-4bca-943d-c2137fc19b52/@@download/cross_correlation_plot/ENCFF702ZTS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB428FAV bradley-bernstein:DNA_Lib 7704 ENCFF702ZTS HiSeq 2500 2016-06-14T05:40:49.927534+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZvJQ0369B0QYY1QQXVf9b ENCSR899TDF https://www.encodeproject.org/experiments/ENCSR899TDF "histone,histone modification,broad histone mark" H3K9me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF895GMY https://www.encodeproject.org/files/ENCFF895GMY/@@download/ENCFF895GMY.bam ENCFF145BIJ https://www.encodeproject.org/files/ENCFF145BIJ/@@download/ENCFF145BIJ.bam 54.5 M 0 52.8 M 0.968 SE 76 76 native 0.0 M 45.5 M 43.5 M 0.797 0.96 0.96 24.52 105 1.00 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/40a36920-ae56-4394-b19d-a8d49be7a18f/@@download/cross_correlation_plot/ENCFF496PCJ-ENCFF869EJQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB965OIZ bradley-bernstein:DNA_Lib 8303 "ENCFF496PCJ,ENCFF869EJQ" HiSeq 2500 2017-01-25T06:10:40.417008+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2412yj0369528x8PvjjPggj ENCSR922OXX https://www.encodeproject.org/experiments/ENCSR922OXX "histone,histone modification,broad histone mark" H3K9me3-human gastrocnemius medialis tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF562GCB https://www.encodeproject.org/files/ENCFF562GCB/@@download/ENCFF562GCB.bam ENCFF705FYT https://www.encodeproject.org/files/ENCFF705FYT/@@download/ENCFF705FYT.bam 87.8 M 0 84.7 M 0.964 SE 76 76 native 0.0 M 71.7 M 65.9 M 0.751 0.92 0.93 13.43 240 1.00 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/8337ecf6-0761-479d-a1c4-292f626b59b0/@@download/cross_correlation_plot/ENCFF696NNL-ENCFF622ULU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB219HOL,ENCLB280AXZ" "bradley-bernstein:DNA_Lib 7780,bradley-bernstein:DNA_Lib 7500" "ENCFF696NNL,ENCFF622ULU" HiSeq 2500 2016-10-26T19:39:47.803814+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0842f803694VvqYvxK22vPz ENCSR922OXX https://www.encodeproject.org/experiments/ENCSR922OXX "histone,histone modification,broad histone mark" H3K9me3-human gastrocnemius medialis tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF660FVM https://www.encodeproject.org/files/ENCFF660FVM/@@download/ENCFF660FVM.bam ENCFF821TYA https://www.encodeproject.org/files/ENCFF821TYA/@@download/ENCFF821TYA.bam 113.5 M 0 109.0 M 0.961 SE 76 76 native 0.0 M 91.9 M 86.0 M 0.758 0.94 0.94 17.53 230 1.00 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b10fcb4-d69b-4e42-96a3-3e68a27685bc/@@download/cross_correlation_plot/ENCFF344HWG-ENCFF797ROW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB119QUF,ENCLB227PJN" "bradley-bernstein:DNA_Lib 7502,bradley-bernstein:DNA_Lib 7778" "ENCFF797ROW,ENCFF344HWG" HiSeq 2500 2016-10-26T19:42:02.407121+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0842kj0369JKJFVg9KK38z2 ENCSR178MWD https://www.encodeproject.org/experiments/ENCSR178MWD control Control-human gastroesophageal sphincter tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF956VTO https://www.encodeproject.org/files/ENCFF956VTO/@@download/ENCFF956VTO.bam ENCFF184MWE https://www.encodeproject.org/files/ENCFF184MWE/@@download/ENCFF184MWE.bam 53.9 M 0 52.2 M 0.968 SE 76 76 native 0.0 M 46.3 M 45.0 M 0.834 0.97 0.97 38.07 100 1.00 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/0409f7e1-57a5-4546-8b01-528cbc3947ba/@@download/cross_correlation_plot/ENCFF260HFH-ENCFF384OED-ENCFF985SAX-ENCFF364CZV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB795YAL bradley-bernstein:DNA_Lib 8123 "ENCFF384OED,ENCFF985SAX,ENCFF260HFH,ENCFF364CZV" HiSeq 2500 2016-10-27T22:01:10.745146+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Xb003699VK2qfkF2Zqp3 ENCSR677LBH https://www.encodeproject.org/experiments/ENCSR677LBH "histone,histone modification,narrow histone mark" H3K27ac-human gastroesophageal sphincter tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF727EYK https://www.encodeproject.org/files/ENCFF727EYK/@@download/ENCFF727EYK.bam ENCFF814FQI https://www.encodeproject.org/files/ENCFF814FQI/@@download/ENCFF814FQI.bam 33.3 M 0 31.9 M 0.958 SE 76 76 native 0.0 M 29.9 M 26.9 M 0.807 0.90 0.90 10.64 200 1.37 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/c66a14ff-3788-4aa3-9a07-e0c134a06a19/@@download/cross_correlation_plot/ENCFF488BKS-ENCFF220NMY-ENCFF144BTL-ENCFF864UBH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB927ZZP bradley-bernstein:DNA_Lib 8152 "ENCFF864UBH,ENCFF220NMY,ENCFF144BTL,ENCFF488BKS" HiSeq 2500 2016-10-31T13:20:35.905692+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8kkQ0369BX1xqb1B81PfX ENCSR872WVR https://www.encodeproject.org/experiments/ENCSR872WVR "histone,histone modification,broad histone mark" H3K4me1-human gastroesophageal sphincter tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF979JKO https://www.encodeproject.org/files/ENCFF979JKO/@@download/ENCFF979JKO.bam ENCFF294UHX https://www.encodeproject.org/files/ENCFF294UHX/@@download/ENCFF294UHX.bam 55.7 M 0 53.9 M 0.968 SE 76 76 native 0.0 M 48.1 M 46.0 M 0.826 0.96 0.96 24.65 210 1.00 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/3acaf5df-838a-4d71-a3dd-854d17477ae9/@@download/cross_correlation_plot/ENCFF933SBD-ENCFF166SND_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB263UHE bradley-bernstein:DNA_Lib 8177 "ENCFF933SBD,ENCFF166SND" HiSeq 2500 2016-10-31T13:21:56.264585+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8kx80369P876f29P7Qb0y ENCSR872WVR https://www.encodeproject.org/experiments/ENCSR872WVR "histone,histone modification,broad histone mark" H3K4me1-human gastroesophageal sphincter tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF643GKN https://www.encodeproject.org/files/ENCFF643GKN/@@download/ENCFF643GKN.bam ENCFF919OPU https://www.encodeproject.org/files/ENCFF919OPU/@@download/ENCFF919OPU.bam 94.1 M 0 91.5 M 0.972 SE 76 76 native 0.0 M 83.6 M 79.7 M 0.848 0.95 0.96 22.24 240 1.02 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7228757-157e-4510-9a32-e9221eedf36d/@@download/cross_correlation_plot/ENCFF347UYT-ENCFF689CYF-ENCFF691CRM-ENCFF367NUF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB728AVL bradley-bernstein:DNA_Lib 8344 "ENCFF347UYT,ENCFF689CYF,ENCFF691CRM,ENCFF367NUF" HiSeq 2500 2017-01-25T21:18:44.393201+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24GFQ80369424qKP3Yf7x5J ENCSR510NXV https://www.encodeproject.org/experiments/ENCSR510NXV "histone,histone modification,narrow histone mark" H3K4me3-human gastroesophageal sphincter tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF113CGU https://www.encodeproject.org/files/ENCFF113CGU/@@download/ENCFF113CGU.bam ENCFF475ZJL https://www.encodeproject.org/files/ENCFF475ZJL/@@download/ENCFF475ZJL.bam 26.9 M 0 24.8 M 0.922 SE 76 76 native 0.0 M 22.5 M 19.1 M 0.711 0.85 0.85 7.07 200 1.83 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/40184ed6-67c5-461e-8602-40968b1be065/@@download/cross_correlation_plot/ENCFF705OAP-ENCFF826IUR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB162TZY bradley-bernstein:DNA_Lib 8151 "ENCFF826IUR,ENCFF705OAP" HiSeq 2500 2016-10-31T13:18:47.380045+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8x2j036913377YJjkvgXx ENCSR510NXV https://www.encodeproject.org/experiments/ENCSR510NXV "histone,histone modification,narrow histone mark" H3K4me3-human gastroesophageal sphincter tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF526EUO https://www.encodeproject.org/files/ENCFF526EUO/@@download/ENCFF526EUO.bam ENCFF308QUD https://www.encodeproject.org/files/ENCFF308QUD/@@download/ENCFF308QUD.bam 39.6 M 0 38.3 M 0.966 SE 76 76 native 0.0 M 34.8 M 31.8 M 0.804 0.92 0.92 13.80 220 1.55 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/a175e302-9b03-49aa-a829-180ed6ec5651/@@download/cross_correlation_plot/ENCFF831YTJ-ENCFF450YJM-ENCFF021AZX-ENCFF155HRA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB499QHS bradley-bernstein:DNA_Lib 8195 "ENCFF450YJM,ENCFF021AZX,ENCFF831YTJ,ENCFF155HRA" HiSeq 2500 2016-11-16T23:55:16.171245+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0fFqVj0369J3gQvqQJBJ4Qq ENCSR025CGR https://www.encodeproject.org/experiments/ENCSR025CGR "histone,histone modification,broad histone mark" H3K9me3-human gastroesophageal sphincter tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF874PGF https://www.encodeproject.org/files/ENCFF874PGF/@@download/ENCFF874PGF.bam ENCFF409ORL https://www.encodeproject.org/files/ENCFF409ORL/@@download/ENCFF409ORL.bam 82.1 M 0 74.4 M 0.905 SE 76 76 native 0.0 M 63.9 M 60.5 M 0.737 0.95 0.95 20.26 100 1.00 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdd878a8-74e5-4363-884b-e6d01a99134c/@@download/cross_correlation_plot/ENCFF710UNG-ENCFF312ACW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB341HGL bradley-bernstein:DNA_Lib 8339 "ENCFF710UNG,ENCFF312ACW" HiSeq 2500 2017-01-25T07:35:55.026921+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2413x003695JvXVBgKgJYz7 ENCSR849WCQ https://www.encodeproject.org/experiments/ENCSR849WCQ "transcription factor,chromatin remodeller" ASH2L-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF898CWV https://www.encodeproject.org/files/ENCFF898CWV/@@download/ENCFF898CWV.bam ENCFF456YBO https://www.encodeproject.org/files/ENCFF456YBO/@@download/ENCFF456YBO.bam 20.1 M 0 18.7 M 0.933 SE 76 76 native 0.0 M 16.6 M 15.5 M 0.772 0.93 0.93 14.70 195 1.02 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/6865ec32-ef56-41f4-a2eb-fc0e570a82d9/@@download/cross_correlation_plot/ENCFF236MSV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB064KHY bradley-bernstein:DNA_Lib 6783 ENCFF236MSV HiSeq 2500 2016-11-05T17:40:17.011221+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjF1j03697vzB1y0B63V57 ENCSR849WCQ https://www.encodeproject.org/experiments/ENCSR849WCQ "transcription factor,chromatin remodeller" ASH2L-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF279PAE https://www.encodeproject.org/files/ENCFF279PAE/@@download/ENCFF279PAE.bam ENCFF306SNU https://www.encodeproject.org/files/ENCFF306SNU/@@download/ENCFF306SNU.bam 40.1 M 0 38.4 M 0.956 SE 75 75 native 0.0 M 33.8 M 29.9 M 0.747 0.89 0.89 8.99 175 1.02 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b8f70f6-f704-4ca1-9fb9-18b5a42a47a5/@@download/cross_correlation_plot/ENCFF439JPL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB624UVT bradley-bernstein:DNA_Lib 6588 ENCFF439JPL HiSeq 2500 2016-11-05T17:41:13.568964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjF6803699P6PYx8BPxQFb ENCSR549NPZ https://www.encodeproject.org/experiments/ENCSR549NPZ "transcription factor,chromatin remodeller,RNA binding protein" CBX3-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF891QYX https://www.encodeproject.org/files/ENCFF891QYX/@@download/ENCFF891QYX.bam ENCFF226SIV https://www.encodeproject.org/files/ENCFF226SIV/@@download/ENCFF226SIV.bam 25.1 M 0 23.4 M 0.931 SE 76 76 native 0.0 M 19.4 M 19.1 M 0.758 0.98 0.99 73.30 235 1.01 0.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb26c7d7-d42e-4247-a423-ff67541b2c03/@@download/cross_correlation_plot/ENCFF525YYN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB227AZX bradley-bernstein:DNA_Lib 6780 ENCFF525YYN HiSeq 2500 2016-10-29T15:37:31.841572+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B00FQ0369P876f29P7QKjZ ENCSR549NPZ https://www.encodeproject.org/experiments/ENCSR549NPZ "transcription factor,chromatin remodeller,RNA binding protein" CBX3-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF814XON https://www.encodeproject.org/files/ENCFF814XON/@@download/ENCFF814XON.bam ENCFF045BQI https://www.encodeproject.org/files/ENCFF045BQI/@@download/ENCFF045BQI.bam 26.7 M 0 25.8 M 0.967 SE 76 76 native 0.0 M 21.9 M 20.7 M 0.776 0.95 0.95 18.79 180 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e923f9a-efdf-403d-a682-cefde0d01b82/@@download/cross_correlation_plot/ENCFF500QDP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB283SSP bradley-bernstein:DNA_Lib 6716 ENCFF500QDP HiSeq 2500 2016-10-29T15:37:28.345724+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B00P80369Bj2bF0JP9K2YG ENCSR265MJJ https://www.encodeproject.org/experiments/ENCSR265MJJ "transcription factor,chromatin remodeller" CBX8-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF275MVV https://www.encodeproject.org/files/ENCFF275MVV/@@download/ENCFF275MVV.bam ENCFF781QDS https://www.encodeproject.org/files/ENCFF781QDS/@@download/ENCFF781QDS.bam 36.9 M 0 35.4 M 0.958 SE 75 75 native 0.0 M 31.4 M 29.7 M 0.804 0.95 0.95 19.11 185 1.01 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/5499ce50-2f01-4a7a-8dcf-5d673ecf8724/@@download/cross_correlation_plot/ENCFF496SEN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB115ATT bradley-bernstein:DNA_Lib 6583 ENCFF496SEN HiSeq 2500 2016-11-05T17:42:08.388198+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjG6003696gP4JvV866KFZ ENCSR265MJJ https://www.encodeproject.org/experiments/ENCSR265MJJ "transcription factor,chromatin remodeller" CBX8-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF924YRM https://www.encodeproject.org/files/ENCFF924YRM/@@download/ENCFF924YRM.bam ENCFF873FLN https://www.encodeproject.org/files/ENCFF873FLN/@@download/ENCFF873FLN.bam 32.6 M 0 30.4 M 0.933 SE 76 76 native 0.0 M 27.1 M 24.2 M 0.741 0.89 0.89 9.25 170 1.01 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/a22c1f62-6c67-4b94-9951-f7a7ff330e97/@@download/cross_correlation_plot/ENCFF641ITN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB337YAA bradley-bernstein:DNA_Lib 6789 ENCFF641ITN HiSeq 2500 2016-11-05T17:40:45.005650+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjGBQ03697bbG5kk861z87 ENCSR228DTL https://www.encodeproject.org/experiments/ENCSR228DTL "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF475TXX https://www.encodeproject.org/files/ENCFF475TXX/@@download/ENCFF475TXX.bam ENCFF440XFM https://www.encodeproject.org/files/ENCFF440XFM/@@download/ENCFF440XFM.bam 39.0 M 0 37.3 M 0.958 SE 75 75 native 0.0 M 33.1 M 31.6 M 0.810 0.96 0.96 23.84 180 1.01 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a898276-df78-40d6-9bc8-a9a8a7732a94/@@download/cross_correlation_plot/ENCFF481ROV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB690SLO bradley-bernstein:DNA_Lib 6584 ENCFF481ROV HiSeq 2500 2016-11-05T17:41:07.142739+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjFYj0369JF07kGZ35f0gg ENCSR228DTL https://www.encodeproject.org/experiments/ENCSR228DTL "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF485EMU https://www.encodeproject.org/files/ENCFF485EMU/@@download/ENCFF485EMU.bam ENCFF902JAR https://www.encodeproject.org/files/ENCFF902JAR/@@download/ENCFF902JAR.bam 25.4 M 0 23.8 M 0.937 SE 76 76 native 0.0 M 21.0 M 20.3 M 0.801 0.97 0.97 33.05 190 1.01 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fbd3cca-d22d-45f0-abf1-f6149cde9365/@@download/cross_correlation_plot/ENCFF687CSH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB200PBJ bradley-bernstein:DNA_Lib 6786 ENCFF687CSH HiSeq 2500 2016-11-05T17:41:08.157949+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjFj8036959gx6j8B2z9z5 ENCSR751CJG https://www.encodeproject.org/experiments/ENCSR751CJG "transcription factor,chromatin remodeller,RNA binding protein" CHD4-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF416WNF https://www.encodeproject.org/files/ENCFF416WNF/@@download/ENCFF416WNF.bam ENCFF944SDM https://www.encodeproject.org/files/ENCFF944SDM/@@download/ENCFF944SDM.bam 42.7 M 0 41.3 M 0.967 SE 76 76 native 0.0 M 36.5 M 35.0 M 0.821 0.96 0.96 26.82 200 1.01 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/d3e828a4-3244-4c0b-841c-bfe297b0c26d/@@download/cross_correlation_plot/ENCFF203DJH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB249IUE bradley-bernstein:DNA_Lib 7152 ENCFF203DJH HiSeq 2500 2016-10-29T15:26:29.881781+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B03q003699VK2qfkF2b4PP ENCSR751CJG https://www.encodeproject.org/experiments/ENCSR751CJG "transcription factor,chromatin remodeller,RNA binding protein" CHD4-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF449TTJ https://www.encodeproject.org/files/ENCFF449TTJ/@@download/ENCFF449TTJ.bam ENCFF337JUL https://www.encodeproject.org/files/ENCFF337JUL/@@download/ENCFF337JUL.bam 68.7 M 0 65.6 M 0.954 SE 76 76 native 0.0 M 58.5 M 48.7 M 0.709 0.84 0.83 5.80 195 1.01 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/44a2c775-4fdc-4ccf-b128-dc2b095ee49b/@@download/cross_correlation_plot/ENCFF374ENZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB735HPS bradley-bernstein:DNA_Lib 7087 ENCFF374ENZ HiSeq 2500 2016-10-29T15:26:28.834951+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B03yj0369FvKVQXxFJk97g ENCSR649WUM https://www.encodeproject.org/experiments/ENCSR649WUM "transcription factor,chromatin remodeller,RNA binding protein" CHD7-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF790UQI https://www.encodeproject.org/files/ENCFF790UQI/@@download/ENCFF790UQI.bam ENCFF735UFM https://www.encodeproject.org/files/ENCFF735UFM/@@download/ENCFF735UFM.bam 65.8 M 0 62.5 M 0.950 SE 76 76 native 0.0 M 54.8 M 50.1 M 0.761 0.92 0.92 13.25 180 1.01 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/565801c5-13e1-4260-bd8a-6bdab0434d01/@@download/cross_correlation_plot/ENCFF663LVG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB537JDJ bradley-bernstein:DNA_Lib 7157 ENCFF663LVG HiSeq 2500 2016-10-29T15:39:58.761143+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B03180369Gy59VJQ1KqF9v ENCSR649WUM https://www.encodeproject.org/experiments/ENCSR649WUM "transcription factor,chromatin remodeller,RNA binding protein" CHD7-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF228FKB https://www.encodeproject.org/files/ENCFF228FKB/@@download/ENCFF228FKB.bam ENCFF914SZR https://www.encodeproject.org/files/ENCFF914SZR/@@download/ENCFF914SZR.bam 54.8 M 0 51.7 M 0.944 SE 76 76 native 0.0 M 45.1 M 41.1 M 0.750 0.91 0.92 12.42 185 1.01 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab57b25b-57d2-4190-8d6e-8b84e97cec41/@@download/cross_correlation_plot/ENCFF428ODU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB148PNW bradley-bernstein:DNA_Lib 7083 ENCFF428ODU HiSeq 2500 2016-10-29T15:36:41.655352+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B03B803694q32PPxBJ7XK4 ENCSR000AKJ https://www.encodeproject.org/experiments/ENCSR000AKJ control Control-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF797ARJ https://www.encodeproject.org/files/ENCFF797ARJ/@@download/ENCFF797ARJ.bam ENCFF852TVX https://www.encodeproject.org/files/ENCFF852TVX/@@download/ENCFF852TVX.bam 10.7 M 0 7.8 M 0.734 SE 51 36 36 0.0 M 5.5 M 5.4 M 0.509 0.99 0.99 105.85 115 1.01 0.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/95d368b6-6b43-44ef-94aa-be563702fca1/@@download/cross_correlation_plot/ENCFF000ARK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEW ENCFF000ARK Illumina Genome Analyzer IIe 2016-08-09T16:00:33.610559+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZGjQ0369J5y8gFQ2XfZY0 ENCSR000AKJ https://www.encodeproject.org/experiments/ENCSR000AKJ control Control-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF547XEQ https://www.encodeproject.org/files/ENCFF547XEQ/@@download/ENCFF547XEQ.bam ENCFF852TVX https://www.encodeproject.org/files/ENCFF852TVX/@@download/ENCFF852TVX.bam 10.7 M 0 7.5 M 0.707 SE 51 47 47 0.0 M 5.8 M 5.7 M 0.537 0.99 0.99 108.34 75 1.01 0.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/75511cd1-6fca-4cbe-bf09-7b1490f8a7b3/@@download/cross_correlation_plot/ENCFF000ARK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEW ENCFF000ARK Illumina Genome Analyzer IIe 2016-08-09T16:00:32.474038+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZJJ003691pg08JG2g7pkY ENCSR000AKJ https://www.encodeproject.org/experiments/ENCSR000AKJ control Control-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF651UIO https://www.encodeproject.org/files/ENCFF651UIO/@@download/ENCFF651UIO.bam ENCFF852TVX https://www.encodeproject.org/files/ENCFF852TVX/@@download/ENCFF852TVX.bam 10.7 M 0 7.3 M 0.683 SE 51 51 None 0.0 M 5.7 M 5.6 M 0.525 0.99 0.99 122.24 75 1.01 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/3927112d-6403-4cc8-926b-c19758bc5dd0/@@download/cross_correlation_plot/ENCFF000ARK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEW ENCFF000ARK Illumina Genome Analyzer IIe 2016-07-13T02:51:04.868991+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z5Pj03693JvxGJJZb0P1x ENCSR000AKJ https://www.encodeproject.org/experiments/ENCSR000AKJ control Control-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF873ZWP https://www.encodeproject.org/files/ENCFF873ZWP/@@download/ENCFF873ZWP.bam ENCFF858ORL https://www.encodeproject.org/files/ENCFF858ORL/@@download/ENCFF858ORL.bam 10.0 M 0 7.3 M 0.729 SE 51 36 36 0.0 M 5.1 M 5.1 M 0.507 0.99 0.99 98.26 55 1.01 0.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/d49d8c74-0f32-404a-b5f6-71dfd82939e6/@@download/cross_correlation_plot/ENCFF000ARO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEX ENCFF000ARO Illumina Genome Analyzer IIe 2016-08-09T16:00:19.669382+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZGpj03691pg08JG2g7pk9 ENCSR000AKJ https://www.encodeproject.org/experiments/ENCSR000AKJ control Control-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF434HLD https://www.encodeproject.org/files/ENCFF434HLD/@@download/ENCFF434HLD.bam ENCFF858ORL https://www.encodeproject.org/files/ENCFF858ORL/@@download/ENCFF858ORL.bam 10.0 M 0 7.1 M 0.709 SE 51 47 47 0.0 M 5.5 M 5.4 M 0.540 0.99 0.99 98.10 105 1.01 0.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf21e574-dac8-4d7b-8da8-b46b0005b670/@@download/cross_correlation_plot/ENCFF000ARO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEX ENCFF000ARO Illumina Genome Analyzer IIe 2016-08-09T16:00:34.465655+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZJPQ0369J5y8gFQ2XfZYP ENCSR000AKJ https://www.encodeproject.org/experiments/ENCSR000AKJ control Control-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF684NLR https://www.encodeproject.org/files/ENCFF684NLR/@@download/ENCFF684NLR.bam ENCFF858ORL https://www.encodeproject.org/files/ENCFF858ORL/@@download/ENCFF858ORL.bam 10.0 M 0 6.9 M 0.693 SE 51 51 None 0.0 M 5.4 M 5.3 M 0.535 0.99 0.99 107.22 105 1.01 0.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f576006-608e-487e-afd5-69967c3fc5cc/@@download/cross_correlation_plot/ENCFF000ARO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEX ENCFF000ARO Illumina Genome Analyzer IIe 2016-07-13T02:51:49.988604+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z5X8036902Vz1B1Zb0kX3 ENCSR142REC https://www.encodeproject.org/experiments/ENCSR142REC control Control-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF142VHH https://www.encodeproject.org/files/ENCFF142VHH/@@download/ENCFF142VHH.bam ENCFF826DOK https://www.encodeproject.org/files/ENCFF826DOK/@@download/ENCFF826DOK.bam 68.0 M 0 65.6 M 0.964 SE 76 76 native 0.0 M 57.9 M 55.8 M 0.820 0.97 0.97 32.81 210 1.01 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/22c1d9b7-8441-4e26-9a19-38b059e1b3e2/@@download/cross_correlation_plot/ENCFF451IDT-ENCFF643EHE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB067ZPY,ENCLB163DKG" "bradley-bernstein:DNA_Lib 6879,bradley-bernstein:DNA_Lib 7093" "ENCFF451IDT,ENCFF643EHE" HiSeq 2500 2016-08-09T16:52:37.011162+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV8B803690qf1GGj2xqpQG ENCSR142REC https://www.encodeproject.org/experiments/ENCSR142REC control Control-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF401XXH https://www.encodeproject.org/files/ENCFF401XXH/@@download/ENCFF401XXH.bam ENCFF579QXQ https://www.encodeproject.org/files/ENCFF579QXQ/@@download/ENCFF579QXQ.bam 35.6 M 0 34.2 M 0.961 SE 76 76 native 0.0 M 30.1 M 29.6 M 0.831 0.99 0.99 76.79 90 1.01 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/e691e611-59f0-430a-8a90-884975720b1e/@@download/cross_correlation_plot/ENCFF015ZEK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB641LWV bradley-bernstein:DNA_Lib 7160 ENCFF015ZEK HiSeq 2500 2016-08-09T16:50:26.818744+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV8J003692zxj1pQ2ky7fV ENCSR120IIK https://www.encodeproject.org/experiments/ENCSR120IIK "transcription factor,chromatin remodeller" CTBP1-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF043KGQ https://www.encodeproject.org/files/ENCFF043KGQ/@@download/ENCFF043KGQ.bam ENCFF428TJR https://www.encodeproject.org/files/ENCFF428TJR/@@download/ENCFF428TJR.bam 23.9 M 0 23.1 M 0.967 SE 76 76 native 0.0 M 20.3 M 18.7 M 0.783 0.92 0.92 12.83 180 1.02 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9f80b57-d51f-4eaa-93e8-bd250ccb0540/@@download/cross_correlation_plot/ENCFF693KOP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB818JAF bradley-bernstein:DNA_Lib 7170 ENCFF693KOP HiSeq 2500 2016-10-29T15:37:20.555415+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B02XQ0369JYX7855VG0J86 ENCSR120IIK https://www.encodeproject.org/experiments/ENCSR120IIK "transcription factor,chromatin remodeller" CTBP1-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF161UYJ https://www.encodeproject.org/files/ENCFF161UYJ/@@download/ENCFF161UYJ.bam ENCFF863NHN https://www.encodeproject.org/files/ENCFF863NHN/@@download/ENCFF863NHN.bam 24.4 M 0 23.8 M 0.975 SE 76 76 native 0.0 M 20.9 M 19.8 M 0.811 0.95 0.95 19.05 185 1.01 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd4f9a12-73b1-4900-aaf4-cad48a285930/@@download/cross_correlation_plot/ENCFF854DIL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB082XBO bradley-bernstein:DNA_Lib 6875 ENCFF854DIL HiSeq 2500 2016-10-29T15:36:18.163777+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B02f80369BG88Zjx051pBx ENCSR000AKB https://www.encodeproject.org/experiments/ENCSR000AKB "transcription factor,RNA binding protein" CTCF-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF538VCH https://www.encodeproject.org/files/ENCFF538VCH/@@download/ENCFF538VCH.bam ENCFF834CAH https://www.encodeproject.org/files/ENCFF834CAH/@@download/ENCFF834CAH.bam 17.9 M 0 11.5 M 0.638 SE 51 36 36 0.0 M 7.9 M 6.8 M 0.377 0.86 0.86 6.75 175 2.26 3.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/cdfc3999-71fa-4ccc-a0ae-0b6e93646da4/@@download/cross_correlation_plot/ENCFF000ARV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADM ENCFF000ARV Illumina Genome Analyzer II 2017-01-05T01:34:18.048391+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1fk8080369Gy3543YZ1j7Kq ENCSR000AKB https://www.encodeproject.org/experiments/ENCSR000AKB "transcription factor,RNA binding protein" CTCF-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF994NWU https://www.encodeproject.org/files/ENCFF994NWU/@@download/ENCFF994NWU.bam ENCFF313NRK https://www.encodeproject.org/files/ENCFF313NRK/@@download/ENCFF313NRK.bam 29.9 M 0 21.4 M 0.718 SE 36 36 native 0.0 M 15.3 M 14.4 M 0.480 0.94 0.94 18.52 165 1.58 2.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed2a49ce-91a6-4448-87ee-74f6bab00e85/@@download/cross_correlation_plot/ENCFF000ARP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASF ENCFF000ARP Illumina Genome Analyzer IIe 2016-10-29T15:37:11.455589+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09zz8003699VK2qfkF2b4GQ ENCSR000ARD https://www.encodeproject.org/experiments/ENCSR000ARD "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF621CEP https://www.encodeproject.org/files/ENCFF621CEP/@@download/ENCFF621CEP.bam ENCFF885ZDW https://www.encodeproject.org/files/ENCFF885ZDW/@@download/ENCFF885ZDW.bam 23.5 M 0 14.6 M 0.621 SE 36 36 native 0.0 M 11.8 M 9.7 M 0.411 0.82 0.82 5.36 120 1.07 3.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/67c3b17f-53e7-4679-8e2b-e24f1ac76997/@@download/cross_correlation_plot/ENCFF000ARU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIX ENCFF000ARU Illumina Genome Analyzer 2017-01-05T01:48:13.245226+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1fk9JQ0369BVx998v4QK4F7 ENCSR000ARD https://www.encodeproject.org/experiments/ENCSR000ARD "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF735FDV https://www.encodeproject.org/files/ENCFF735FDV/@@download/ENCFF735FDV.bam ENCFF731DXP https://www.encodeproject.org/files/ENCFF731DXP/@@download/ENCFF731DXP.bam 63.4 M 0 49.1 M 0.774 SE 36 36 native 0.0 M 38.7 M 31.8 M 0.501 0.83 0.83 5.72 115 1.03 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/54730c9c-38dc-4119-8116-eedfe2a72b30/@@download/cross_correlation_plot/ENCFF000ASA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIW ENCFF000ASA Illumina Genome Analyzer 2017-01-05T03:14:34.580822+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1fk9XQ03696yX0b3ZJyG787 ENCSR000AOV https://www.encodeproject.org/experiments/ENCSR000AOV "histone,histone modification,narrow histone mark" H2AFZ-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF762TRA https://www.encodeproject.org/files/ENCFF762TRA/@@download/ENCFF762TRA.bam ENCFF296GGQ https://www.encodeproject.org/files/ENCFF296GGQ/@@download/ENCFF296GGQ.bam 26.4 M 0 21.0 M 0.795 SE 36 36 36 0.0 M 17.1 M 16.2 M 0.612 0.95 0.95 20.44 140 1.20 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/7fe9fc05-f2af-4a1f-9a00-d7986e0d914f/@@download/cross_correlation_plot/ENCFF000ASC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACX ENCFF000ASC Illumina Genome Analyzer IIx 2016-11-05T17:37:41.683114+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk8jQ03697vzB1y0B63VG2 ENCSR000AOV https://www.encodeproject.org/experiments/ENCSR000AOV "histone,histone modification,narrow histone mark" H2AFZ-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF848PUT https://www.encodeproject.org/files/ENCFF848PUT/@@download/ENCFF848PUT.bam ENCFF125DCJ https://www.encodeproject.org/files/ENCFF125DCJ/@@download/ENCFF125DCJ.bam 19.8 M 0 15.3 M 0.772 SE 36 36 36 0.0 M 12.4 M 11.5 M 0.580 0.93 0.93 14.10 150 1.29 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d157c9f-2408-40cc-9e8b-a4b8c76a1130/@@download/cross_correlation_plot/ENCFF000ASD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACY ENCFF000ASD Illumina Genome Analyzer IIx 2016-11-05T17:37:05.034317+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk8vQ03693Yx5pkGB3y92V ENCSR000AKC https://www.encodeproject.org/experiments/ENCSR000AKC "histone,histone modification,narrow histone mark" H3K27ac-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF804NCH https://www.encodeproject.org/files/ENCFF804NCH/@@download/ENCFF804NCH.bam ENCFF620IUQ https://www.encodeproject.org/files/ENCFF620IUQ/@@download/ENCFF620IUQ.bam 27.0 M 0 8.8 M 0.325 SE 51 51 native 0.0 M 6.7 M 6.4 M 0.239 0.97 0.97 31.02 190 1.41 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/83fa2090-0bc2-4d44-b56d-ce06fba0565d/@@download/cross_correlation_plot/ENCFF000ASU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQT ENCFF000ASU Illumina Genome Analyzer IIe 2016-08-09T15:59:08.907375+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY8vQ0369J0Bzfkv2Xyx9G ENCSR000AKC https://www.encodeproject.org/experiments/ENCSR000AKC "histone,histone modification,narrow histone mark" H3K27ac-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF948GTC https://www.encodeproject.org/files/ENCFF948GTC/@@download/ENCFF948GTC.bam ENCFF067FBS https://www.encodeproject.org/files/ENCFF067FBS/@@download/ENCFF067FBS.bam 9.8 M 0 6.9 M 0.709 SE 51 51 native 0.0 M 5.7 M 5.5 M 0.562 0.97 0.97 37.76 185 1.47 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/841c4519-fbae-471a-820f-937ddb7d521e/@@download/cross_correlation_plot/ENCFF000ASP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQU ENCFF000ASP Illumina Genome Analyzer IIe 2016-08-09T15:58:36.105066+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY8z00369BB4PPpG2jBgyQ ENCSR000AKD https://www.encodeproject.org/experiments/ENCSR000AKD "histone,histone modification,broad histone mark" H3K27me3-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF231DJN https://www.encodeproject.org/files/ENCFF231DJN/@@download/ENCFF231DJN.bam ENCFF587LMY https://www.encodeproject.org/files/ENCFF587LMY/@@download/ENCFF587LMY.bam 28.8 M 0 12.5 M 0.436 SE 51 51 native 0.0 M 9.6 M 9.4 M 0.328 0.98 0.98 62.98 185 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8234680-45c2-44c4-bb46-67740a8f58c6/@@download/cross_correlation_plot/ENCFF000ASZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACV ENCFF000ASZ Illumina Genome Analyzer IIe 2017-01-05T02:03:16.708960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1fkBy8036988JQz3YF5Jgpg ENCSR000AKD https://www.encodeproject.org/experiments/ENCSR000AKD "histone,histone modification,broad histone mark" H3K27me3-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF175YYN https://www.encodeproject.org/files/ENCFF175YYN/@@download/ENCFF175YYN.bam ENCFF517QUV https://www.encodeproject.org/files/ENCFF517QUV/@@download/ENCFF517QUV.bam 10.3 M 0 7.9 M 0.770 SE 51 51 native 0.0 M 6.4 M 6.1 M 0.596 0.96 0.96 26.71 230 1.02 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7b94e5a-0a97-45e5-ae87-d36cf35fc4e1/@@download/cross_correlation_plot/ENCFF000ASV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACU ENCFF000ASV Illumina Genome Analyzer IIe 2017-01-05T01:32:25.828284+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1fkF38036988JQz3YF5Jgq0 ENCSR000AKE https://www.encodeproject.org/experiments/ENCSR000AKE "histone,histone modification,broad histone mark" H3K36me3-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF958QVX https://www.encodeproject.org/files/ENCFF958QVX/@@download/ENCFF958QVX.bam ENCFF366HRF https://www.encodeproject.org/files/ENCFF366HRF/@@download/ENCFF366HRF.bam 22.4 M 0 15.3 M 0.684 SE 51 36 36 0.0 M 10.2 M 9.6 M 0.428 0.94 0.94 15.57 165 1.02 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/15add2c1-1908-4ea3-b8bf-bd6d6b565822/@@download/cross_correlation_plot/ENCFF000ATN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGK ENCFF000ATN Illumina Genome Analyzer II 2016-11-05T17:37:10.360296+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk8P803696jy9Kv0B4Y6b8 ENCSR000AKE https://www.encodeproject.org/experiments/ENCSR000AKE "histone,histone modification,broad histone mark" H3K36me3-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF460TXJ https://www.encodeproject.org/files/ENCFF460TXJ/@@download/ENCFF460TXJ.bam ENCFF541EAW https://www.encodeproject.org/files/ENCFF541EAW/@@download/ENCFF541EAW.bam 14.3 M 0 10.7 M 0.750 SE 51 36 36 0.0 M 7.5 M 7.4 M 0.518 0.99 0.99 73.39 -15 1.02 0.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/1015604e-7924-4a2a-ac68-f1fb99e45a1d/@@download/cross_correlation_plot/ENCFF000ATJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQR ENCFF000ATJ Illumina Genome Analyzer IIe 2016-11-05T17:37:07.058438+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk8YQ036945FQkxk8GJPVJ ENCSR000AKF https://www.encodeproject.org/experiments/ENCSR000AKF "histone,histone modification,broad histone mark" H3K4me1-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF153KPG https://www.encodeproject.org/files/ENCFF153KPG/@@download/ENCFF153KPG.bam ENCFF934CQC https://www.encodeproject.org/files/ENCFF934CQC/@@download/ENCFF934CQC.bam 48.2 M 0 44.1 M 0.915 SE 36 36 36 0.0 M 34.6 M 26.8 M 0.556 0.78 0.80 5.56 205 1.08 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e6e5739-33b8-4bfe-844d-6a76bf1f4a92/@@download/cross_correlation_plot/ENCFF000ASM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMJ ENCFF000ASM Illumina Genome Analyzer IIx 2016-11-05T17:38:11.989170+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkB7j03699P6PYx8BPxQYP ENCSR000AKF https://www.encodeproject.org/experiments/ENCSR000AKF "histone,histone modification,broad histone mark" H3K4me1-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF815TLX https://www.encodeproject.org/files/ENCFF815TLX/@@download/ENCFF815TLX.bam ENCFF876TMJ https://www.encodeproject.org/files/ENCFF876TMJ/@@download/ENCFF876TMJ.bam 14.9 M 0 10.3 M 0.692 SE 51 36 36 0.0 M 7.3 M 7.0 M 0.469 0.96 0.96 24.08 235 1.12 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f4349c5-67d4-4a4a-84c9-de223821dbd4/@@download/cross_correlation_plot/ENCFF000ATK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWJ ENCFF000ATK Illumina Genome Analyzer IIe 2016-11-05T17:36:50.329457+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkBFj03696jy9Kv0B4Y6bk ENCSR000AKG https://www.encodeproject.org/experiments/ENCSR000AKG "histone,histone modification,narrow histone mark" H3K4me2-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF803ROB https://www.encodeproject.org/files/ENCFF803ROB/@@download/ENCFF803ROB.bam ENCFF434LXG https://www.encodeproject.org/files/ENCFF434LXG/@@download/ENCFF434LXG.bam 12.3 M 0 8.9 M 0.720 SE 51 51 native 0.0 M 6.9 M 6.6 M 0.537 0.97 0.97 34.07 175 1.22 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1ae1518-e627-4d01-a7c3-10f4dbabfce8/@@download/cross_correlation_plot/ENCFF000ATO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUT ENCFF000ATO Illumina Genome Analyzer IIe 2017-01-06T16:48:11.979492+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gqVPj0369Gy3543YZ1jJYk ENCSR000AKG https://www.encodeproject.org/experiments/ENCSR000AKG "histone,histone modification,narrow histone mark" H3K4me2-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF128WUO https://www.encodeproject.org/files/ENCFF128WUO/@@download/ENCFF128WUO.bam ENCFF491HQJ https://www.encodeproject.org/files/ENCFF491HQJ/@@download/ENCFF491HQJ.bam 8.7 M 0 7.0 M 0.800 SE 51 51 native 0.0 M 5.9 M 5.7 M 0.658 0.98 0.98 43.26 170 1.22 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f2f94ae-47ce-4048-a669-1ac992dc57fc/@@download/cross_correlation_plot/ENCFF000ATW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUU ENCFF000ATW Illumina Genome Analyzer IIe 2017-01-06T16:48:07.636971+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gqVf8036926KpbGbP70ZKg ENCSR000AKA https://www.encodeproject.org/experiments/ENCSR000AKA "histone,histone modification,narrow histone mark" H3K4me3-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF019VEK https://www.encodeproject.org/files/ENCFF019VEK/@@download/ENCFF019VEK.bam ENCFF433IIU https://www.encodeproject.org/files/ENCFF433IIU/@@download/ENCFF433IIU.bam 49.1 M 0 23.7 M 0.483 SE 36 36 native 0.0 M 15.5 M 15.1 M 0.307 0.98 0.98 42.46 165 1.13 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/516fc036-7218-40f2-afb4-9d41d2a02d02/@@download/cross_correlation_plot/ENCFF000AUB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGH ENCFF000AUB Illumina Genome Analyzer IIe 2016-08-20T00:45:17.188191+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZP2003696k6PjpZ95Bxjg ENCSR000AKA https://www.encodeproject.org/experiments/ENCSR000AKA "histone,histone modification,narrow histone mark" H3K4me3-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF278QPY https://www.encodeproject.org/files/ENCFF278QPY/@@download/ENCFF278QPY.bam ENCFF708JUN https://www.encodeproject.org/files/ENCFF708JUN/@@download/ENCFF708JUN.bam 95.7 M 0 68.5 M 0.716 SE 36 36 native 0.0 M 50.5 M 46.8 M 0.489 0.93 0.93 14.92 185 1.13 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3cbf7de-75f7-4a48-b08e-e16c7fea9d0b/@@download/cross_correlation_plot/ENCFF000ASR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGI ENCFF000ASR Illumina Genome Analyzer IIe 2016-08-20T00:47:39.614645+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZP4Q03693GY6YjZ97650v ENCSR057BWO https://www.encodeproject.org/experiments/ENCSR057BWO "histone,histone modification,narrow histone mark" H3K4me3-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF396LGW https://www.encodeproject.org/files/ENCFF396LGW/@@download/ENCFF396LGW.bam ENCFF635VVK https://www.encodeproject.org/files/ENCFF635VVK/@@download/ENCFF635VVK.bam 34.8 M 0 33.4 M 0.961 SE 76 76 native 0.0 M 29.5 M 28.4 M 0.816 0.96 0.96 27.49 200 1.03 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ff1645d-2381-4355-ac0b-72fca6050ef1/@@download/cross_correlation_plot/ENCFF825QGB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB736ZLR bradley-bernstein:DNA_Lib 5583 ENCFF825QGB HiSeq 2500 2016-08-09T16:49:55.278043+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV8Z8036972Fz1xj2vY2gY ENCSR057BWO https://www.encodeproject.org/experiments/ENCSR057BWO "histone,histone modification,narrow histone mark" H3K4me3-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF634CBL https://www.encodeproject.org/files/ENCFF634CBL/@@download/ENCFF634CBL.bam ENCFF811ZTA https://www.encodeproject.org/files/ENCFF811ZTA/@@download/ENCFF811ZTA.bam 47.2 M 0 44.9 M 0.950 SE 76 76 native 0.0 M 39.2 M 36.7 M 0.776 0.93 0.94 15.57 175 1.05 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/abe4450f-663a-4dff-94f3-720964d87f15/@@download/cross_correlation_plot/ENCFF598WCX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB973TBZ bradley-bernstein:DNA_Lib 5582 ENCFF598WCX HiSeq 2500 2016-08-09T16:49:51.229709+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV8fQ03696g79pkG2YKkGG ENCSR000AOW https://www.encodeproject.org/experiments/ENCSR000AOW "histone,histone modification,broad histone mark" H3K79me2-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF676NDU https://www.encodeproject.org/files/ENCFF676NDU/@@download/ENCFF676NDU.bam ENCFF720OEQ https://www.encodeproject.org/files/ENCFF720OEQ/@@download/ENCFF720OEQ.bam 19.4 M 0 16.3 M 0.842 SE 36 36 36 0.0 M 13.0 M 12.3 M 0.635 0.95 0.95 19.49 110 1.13 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/da841530-edd6-4bbd-ac21-f1f3222d5371/@@download/cross_correlation_plot/ENCFF000AUD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACB ENCFF000AUD Illumina Genome Analyzer IIx 2016-11-05T17:37:30.573376+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk67Q036959gx6j8B2zB56 ENCSR000AOW https://www.encodeproject.org/experiments/ENCSR000AOW "histone,histone modification,broad histone mark" H3K79me2-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF231YZJ https://www.encodeproject.org/files/ENCFF231YZJ/@@download/ENCFF231YZJ.bam ENCFF124MJB https://www.encodeproject.org/files/ENCFF124MJB/@@download/ENCFF124MJB.bam 19.4 M 0 15.3 M 0.788 SE 36 36 36 0.0 M 12.3 M 11.5 M 0.592 0.94 0.94 16.94 100 1.14 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/25ca7a60-460f-45b1-9295-40f8b9426ec0/@@download/cross_correlation_plot/ENCFF000AUC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACC ENCFF000AUC Illumina Genome Analyzer IIx 2016-11-05T17:37:39.290799+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk6G003697vzB1y0B63VF9 ENCSR000AKH https://www.encodeproject.org/experiments/ENCSR000AKH "histone,histone modification,narrow histone mark" H3K9ac-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF737GSB https://www.encodeproject.org/files/ENCFF737GSB/@@download/ENCFF737GSB.bam ENCFF095EBZ https://www.encodeproject.org/files/ENCFF095EBZ/@@download/ENCFF095EBZ.bam 15.8 M 0 12.1 M 0.762 SE 47 36 36 0.0 M 8.6 M 7.9 M 0.499 0.92 0.92 12.62 190 1.43 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe13773e-ea50-4f3b-a205-c7f734bd809e/@@download/cross_correlation_plot/ENCFF000AUN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEK ENCFF000AUN Illumina Genome Analyzer II 2016-11-05T17:36:14.839182+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkJgj0369P6G90pZB0zypb ENCSR000AKH https://www.encodeproject.org/experiments/ENCSR000AKH "histone,histone modification,narrow histone mark" H3K9ac-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF424IMO https://www.encodeproject.org/files/ENCFF424IMO/@@download/ENCFF424IMO.bam ENCFF822BBB https://www.encodeproject.org/files/ENCFF822BBB/@@download/ENCFF822BBB.bam 11.7 M 0 8.0 M 0.682 SE 51 36 36 0.0 M 5.9 M 5.7 M 0.489 0.97 0.97 37.51 205 1.24 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b74924b-cf90-411e-af5e-6ab1d8dd42aa/@@download/cross_correlation_plot/ENCFF000AUM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEJ ENCFF000AUM Illumina Genome Analyzer IIe 2016-11-05T17:35:58.194448+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkJv80369349Kqpx8PZY6f ENCSR000AOX https://www.encodeproject.org/experiments/ENCSR000AOX "histone,histone modification,broad histone mark" H3K9me3-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF663EWP https://www.encodeproject.org/files/ENCFF663EWP/@@download/ENCFF663EWP.bam ENCFF030QXS https://www.encodeproject.org/files/ENCFF030QXS/@@download/ENCFF030QXS.bam 20.6 M 0 17.6 M 0.850 SE 36 36 36 0.0 M 12.4 M 11.3 M 0.546 0.92 0.92 11.72 110 1.04 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/36167eaf-5048-45b3-8f31-1737458edf0c/@@download/cross_correlation_plot/ENCFF000AUK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASI ENCFF000AUK Illumina Genome Analyzer IIx 2016-11-05T17:34:58.966282+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkX9Q03697vzB1y0B63VQX ENCSR000AOX https://www.encodeproject.org/experiments/ENCSR000AOX "histone,histone modification,broad histone mark" H3K9me3-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF758GUH https://www.encodeproject.org/files/ENCFF758GUH/@@download/ENCFF758GUH.bam ENCFF335MWA https://www.encodeproject.org/files/ENCFF335MWA/@@download/ENCFF335MWA.bam 18.1 M 0 14.6 M 0.804 SE 36 36 36 0.0 M 10.1 M 8.8 M 0.483 0.87 0.87 7.50 120 1.06 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/0643a075-99c7-4b18-aeeb-045ecaa8b897/@@download/cross_correlation_plot/ENCFF000AUO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOK ENCFF000AUO Illumina Genome Analyzer IIx 2016-11-05T17:34:28.555959+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkXPQ03696jy9Kv0B4Y6qK ENCSR000AOX https://www.encodeproject.org/experiments/ENCSR000AOX "histone,histone modification,broad histone mark" H3K9me3-human GM12878 immortalized cell line 3 bradley-bernstein ENCODE2 GRCh38 ENCFF370XAS https://www.encodeproject.org/files/ENCFF370XAS/@@download/ENCFF370XAS.bam ENCFF144FVL https://www.encodeproject.org/files/ENCFF144FVL/@@download/ENCFF144FVL.bam 18.5 M 0 15.7 M 0.849 SE 36 36 36 0.0 M 8.6 M 8.1 M 0.438 0.95 0.95 20.76 175 1.11 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/b85244c0-cf52-4fc5-863f-7fa3f7fc63d4/@@download/cross_correlation_plot/ENCFF000AUP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOL ENCFF000AUP Illumina Genome Analyzer IIx 2016-11-05T17:34:33.225079+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkXbj03696zP1V5JfxK218 ENCSR000AKI https://www.encodeproject.org/experiments/ENCSR000AKI "histone,histone modification,broad histone mark" H4K20me1-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF880XJW https://www.encodeproject.org/files/ENCFF880XJW/@@download/ENCFF880XJW.bam ENCFF648VIE https://www.encodeproject.org/files/ENCFF648VIE/@@download/ENCFF648VIE.bam 18.6 M 0 12.1 M 0.650 SE 51 36 36 0.0 M 7.5 M 7.2 M 0.386 0.96 0.96 26.81 215 1.02 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/71ae54e9-8f52-45a5-af03-e68448fcd23e/@@download/cross_correlation_plot/ENCFF000AVC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADT ENCFF000AVC Illumina Genome Analyzer II 2016-11-05T17:34:34.487545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkVX003697GFbjV1b4gPpY ENCSR000AKI https://www.encodeproject.org/experiments/ENCSR000AKI "histone,histone modification,broad histone mark" H4K20me1-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF937PBY https://www.encodeproject.org/files/ENCFF937PBY/@@download/ENCFF937PBY.bam ENCFF537JWT https://www.encodeproject.org/files/ENCFF537JWT/@@download/ENCFF537JWT.bam 13.7 M 0 9.7 M 0.709 SE 51 36 36 0.0 M 6.8 M 6.7 M 0.489 0.99 0.99 90.62 190 1.02 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/92228b79-d6aa-4312-905e-e34f0ca10614/@@download/cross_correlation_plot/ENCFF000AVB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADS ENCFF000AVB Illumina Genome Analyzer IIe 2016-11-05T17:34:37.529239+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkVf8036959gx6j8B2zB9y ENCSR330OEO https://www.encodeproject.org/experiments/ENCSR330OEO "transcription factor,chromatin remodeller" HDAC2-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF954FIU https://www.encodeproject.org/files/ENCFF954FIU/@@download/ENCFF954FIU.bam ENCFF793CEU https://www.encodeproject.org/files/ENCFF793CEU/@@download/ENCFF793CEU.bam 37.1 M 0 35.1 M 0.947 SE 75 75 native 0.0 M 30.9 M 28.5 M 0.768 0.92 0.93 13.29 195 1.01 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf061fcd-782a-4608-81e8-93f966e83387/@@download/cross_correlation_plot/ENCFF846FJT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB674CRX bradley-bernstein:DNA_Lib 6587 ENCFF846FJT HiSeq 2500 2016-11-05T17:41:10.307591+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjFvQ0369B9XVbg4B76B3p ENCSR330OEO https://www.encodeproject.org/experiments/ENCSR330OEO "transcription factor,chromatin remodeller" HDAC2-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF122XZP https://www.encodeproject.org/files/ENCFF122XZP/@@download/ENCFF122XZP.bam ENCFF769EMA https://www.encodeproject.org/files/ENCFF769EMA/@@download/ENCFF769EMA.bam 26.6 M 0 24.9 M 0.937 SE 76 76 native 0.0 M 22.1 M 20.7 M 0.779 0.94 0.94 17.77 200 1.01 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/d5a2e5c1-88fe-43dd-9408-f81f7a794b42/@@download/cross_correlation_plot/ENCFF533CYJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB774RSM bradley-bernstein:DNA_Lib 6781 ENCFF533CYJ HiSeq 2500 2016-11-05T17:41:16.398562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjG100369BV4Z6KQV32j2v ENCSR391IWM https://www.encodeproject.org/experiments/ENCSR391IWM "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF761QRJ https://www.encodeproject.org/files/ENCFF761QRJ/@@download/ENCFF761QRJ.bam ENCFF108NQY https://www.encodeproject.org/files/ENCFF108NQY/@@download/ENCFF108NQY.bam 33.4 M 0 31.8 M 0.953 SE 75 75 native 0.0 M 28.1 M 25.3 M 0.759 0.90 0.90 10.11 170 1.01 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7ed60e1-9eaa-4d97-b14d-5e111369f3e0/@@download/cross_correlation_plot/ENCFF100FQP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB507VEX bradley-bernstein:DNA_Lib 6586 ENCFF100FQP HiSeq 2500 2016-11-05T17:42:34.714553+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjFF0036959gx6j8B2z9yf ENCSR391IWM https://www.encodeproject.org/experiments/ENCSR391IWM "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF122ZQQ https://www.encodeproject.org/files/ENCFF122ZQQ/@@download/ENCFF122ZQQ.bam ENCFF679PJD https://www.encodeproject.org/files/ENCFF679PJD/@@download/ENCFF679PJD.bam 26.8 M 0 24.9 M 0.928 SE 76 76 native 0.0 M 22.0 M 20.9 M 0.778 0.95 0.95 20.62 175 1.01 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/b621415c-f3ff-4295-9257-57404be754aa/@@download/cross_correlation_plot/ENCFF965ZWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB769GWB bradley-bernstein:DNA_Lib 6784 ENCFF965ZWE HiSeq 2500 2016-11-05T17:40:55.721352+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjFP8036945FQkxk8GJP86 ENCSR982FSK https://www.encodeproject.org/experiments/ENCSR982FSK "transcription factor,chromatin remodeller" KDM5A-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF175TRB https://www.encodeproject.org/files/ENCFF175TRB/@@download/ENCFF175TRB.bam ENCFF263FQO https://www.encodeproject.org/files/ENCFF263FQO/@@download/ENCFF263FQO.bam 40.6 M 0 39.0 M 0.960 SE 76 76 native 0.0 M 34.3 M 32.4 M 0.798 0.95 0.95 18.52 205 1.01 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bf5017a-a719-475c-9e37-4fb0e6b86e70/@@download/cross_correlation_plot/ENCFF427HAD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB584FZQ bradley-bernstein:DNA_Lib 6687 ENCFF427HAD HiSeq 2500 2016-10-29T15:38:30.044916+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B000Q0369BG88Zjx051p9V ENCSR982FSK https://www.encodeproject.org/experiments/ENCSR982FSK "transcription factor,chromatin remodeller" KDM5A-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF308AVE https://www.encodeproject.org/files/ENCFF308AVE/@@download/ENCFF308AVE.bam ENCFF461ZVD https://www.encodeproject.org/files/ENCFF461ZVD/@@download/ENCFF461ZVD.bam 34.9 M 0 33.2 M 0.951 SE 76 76 native 0.0 M 29.3 M 27.9 M 0.801 0.96 0.96 24.69 195 1.01 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d3c4138-d9de-497e-8936-1cd1be7b5f34/@@download/cross_correlation_plot/ENCFF338YNC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB267CFW bradley-bernstein:DNA_Lib 7081 ENCFF338YNC HiSeq 2500 2016-10-29T15:37:37.500591+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B004j03699VK2qfkF2b4Jp ENCSR330EXS https://www.encodeproject.org/experiments/ENCSR330EXS "transcription factor,chromatin remodeller,RNA binding protein" RBBP5-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF207IEO https://www.encodeproject.org/files/ENCFF207IEO/@@download/ENCFF207IEO.bam ENCFF274KZU https://www.encodeproject.org/files/ENCFF274KZU/@@download/ENCFF274KZU.bam 29.3 M 0 27.9 M 0.955 SE 75 75 native 0.0 M 24.8 M 23.6 M 0.806 0.95 0.95 21.74 180 1.01 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1e94f56-a90a-4c79-a9ff-5c528488302d/@@download/cross_correlation_plot/ENCFF561XFC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB671RMZ bradley-bernstein:DNA_Lib 6582 ENCFF561XFC HiSeq 2500 2016-11-05T17:40:55.914719+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjBQ803690fYk9G03B1f4F ENCSR330EXS https://www.encodeproject.org/experiments/ENCSR330EXS "transcription factor,chromatin remodeller,RNA binding protein" RBBP5-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF145BPW https://www.encodeproject.org/files/ENCFF145BPW/@@download/ENCFF145BPW.bam ENCFF531BVQ https://www.encodeproject.org/files/ENCFF531BVQ/@@download/ENCFF531BVQ.bam 26.9 M 0 24.9 M 0.927 SE 76 76 native 0.0 M 22.1 M 20.4 M 0.758 0.92 0.92 13.14 175 1.01 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/9014856f-cd2b-42b2-85c0-c59c8567e56e/@@download/cross_correlation_plot/ENCFF425QLF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB069XOY bradley-bernstein:DNA_Lib 6788 ENCFF425QLF HiSeq 2500 2016-11-05T17:40:47.655861+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjBZ803697vzB1y0B63V4b ENCSR410HFN https://www.encodeproject.org/experiments/ENCSR410HFN "transcription factor,chromatin remodeller" WHSC1-human GM12878 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF231XIX https://www.encodeproject.org/files/ENCFF231XIX/@@download/ENCFF231XIX.bam ENCFF075BMU https://www.encodeproject.org/files/ENCFF075BMU/@@download/ENCFF075BMU.bam 20.6 M 0 20.0 M 0.974 SE 76 76 native 0.0 M 17.9 M 16.6 M 0.808 0.93 0.93 14.11 330 1.01 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/0467b6ed-7f55-4727-ba14-634d011fba7c/@@download/cross_correlation_plot/ENCFF304MPX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB758GEJ bradley-bernstein:DNA_Lib 7214 ENCFF304MPX HiSeq 2500 2016-10-29T15:37:01.784324+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B027803699VK2qfkF2b4KY ENCSR410HFN https://www.encodeproject.org/experiments/ENCSR410HFN "transcription factor,chromatin remodeller" WHSC1-human GM12878 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF221HKO https://www.encodeproject.org/files/ENCFF221HKO/@@download/ENCFF221HKO.bam ENCFF211EMQ https://www.encodeproject.org/files/ENCFF211EMQ/@@download/ENCFF211EMQ.bam 25.7 M 0 24.7 M 0.959 SE 76 76 native 0.0 M 22.0 M 20.8 M 0.807 0.95 0.95 20.63 185 1.01 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/149eb258-c551-4b46-84fe-b3b8f2385aff/@@download/cross_correlation_plot/ENCFF994FAH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB346TVP bradley-bernstein:DNA_Lib 7089 ENCFF994FAH HiSeq 2500 2016-10-29T15:37:51.382966+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B02J00369668063VP6bfQj ENCSR774YGM https://www.encodeproject.org/experiments/ENCSR774YGM "transcription factor,chromatin remodeller" CBX2-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF201GWN https://www.encodeproject.org/files/ENCFF201GWN/@@download/ENCFF201GWN.bam ENCFF999CUJ https://www.encodeproject.org/files/ENCFF999CUJ/@@download/ENCFF999CUJ.bam 29.1 M 0 22.4 M 0.773 SE 36 36 native 0.0 M 16.7 M 15.5 M 0.534 0.94 0.94 15.90 210 1.01 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ebff479-48eb-4535-bcfc-533b6492df7b/@@download/cross_correlation_plot/ENCFF675KJY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB601IKH bradley-bernstein:DNA_Lib 2152 ENCFF675KJY HiSeq 2000 2016-11-26T01:23:33.721069+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB7G80369J81yj9VV3FZ09 ENCSR774YGM https://www.encodeproject.org/experiments/ENCSR774YGM "transcription factor,chromatin remodeller" CBX2-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF614JXQ https://www.encodeproject.org/files/ENCFF614JXQ/@@download/ENCFF614JXQ.bam ENCFF581OTR https://www.encodeproject.org/files/ENCFF581OTR/@@download/ENCFF581OTR.bam 32.6 M 0 32.0 M 0.984 SE 36 36 native 0.0 M 25.7 M 22.2 M 0.681 0.86 0.86 7.24 215 1.07 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/3322cd4f-3657-46d4-80aa-277040175a16/@@download/cross_correlation_plot/ENCFF481ENJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB206FBF bradley-bernstein:DNA_Lib 5681 ENCFF481ENJ HiSeq 2500 2016-11-26T01:23:28.003069+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB7Qj03694jJVG35Fx48vv ENCSR267YDT https://www.encodeproject.org/experiments/ENCSR267YDT "transcription factor,chromatin remodeller,RNA binding protein" CBX3-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF154QFZ https://www.encodeproject.org/files/ENCFF154QFZ/@@download/ENCFF154QFZ.bam ENCFF922GVW https://www.encodeproject.org/files/ENCFF922GVW/@@download/ENCFF922GVW.bam 45.6 M 0 36.2 M 0.793 SE 36 36 native 0.0 M 20.3 M 19.8 M 0.434 0.98 0.98 44.64 210 1.02 0.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/faf2a16f-f49d-4639-95c1-690ddb8196c8/@@download/cross_correlation_plot/ENCFF613SKX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB717OWZ bradley-bernstein:DNA_Lib 2200 ENCFF613SKX HiSeq 2000 2016-11-25T03:04:33.658313+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qVB58036943B6X5x3Fvf9P ENCSR267YDT https://www.encodeproject.org/experiments/ENCSR267YDT "transcription factor,chromatin remodeller,RNA binding protein" CBX3-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF915GUA https://www.encodeproject.org/files/ENCFF915GUA/@@download/ENCFF915GUA.bam ENCFF212ANE https://www.encodeproject.org/files/ENCFF212ANE/@@download/ENCFF212ANE.bam 70.0 M 0 67.1 M 0.959 SE 76 36 36 0.0 M 45.0 M 23.9 M 0.342 0.53 0.48 1.67 160 1.04 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/d3b2274d-5de5-4926-88c4-05cefee30421/@@download/cross_correlation_plot/ENCFF224IEM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB448QLT bradley-bernstein:DNA_Lib 5803 ENCFF224IEM HiSeq 2500 2016-11-25T20:33:04.950798+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyjG803693q3XFPQy0vBb1 ENCSR814KIO https://www.encodeproject.org/experiments/ENCSR814KIO "transcription factor,chromatin remodeller" CBX5-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF500PUQ https://www.encodeproject.org/files/ENCFF500PUQ/@@download/ENCFF500PUQ.bam ENCFF410WJI https://www.encodeproject.org/files/ENCFF410WJI/@@download/ENCFF410WJI.bam 56.7 M 0 21.5 M 0.379 SE 36 36 native 0.0 M 13.6 M 12.5 M 0.220 0.92 0.92 12.88 185 1.02 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/64b43a2d-9501-4bda-944a-ffafffecf36f/@@download/cross_correlation_plot/ENCFF372AND.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB254JND bradley-bernstein:DNA_Lib 2204 ENCFF372AND HiSeq 2000 2016-11-26T01:24:12.782332+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB6g003694jJVG35Fx48vG ENCSR814KIO https://www.encodeproject.org/experiments/ENCSR814KIO "transcription factor,chromatin remodeller" CBX5-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF690FZS https://www.encodeproject.org/files/ENCFF690FZS/@@download/ENCFF690FZS.bam ENCFF936WIF https://www.encodeproject.org/files/ENCFF936WIF/@@download/ENCFF936WIF.bam 22.7 M 0 20.6 M 0.907 SE 36 36 native 0.0 M 11.9 M 11.3 M 0.499 0.95 0.96 22.43 -20 1.01 0.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/37838336-05ce-4431-8f99-b4370250c391/@@download/cross_correlation_plot/ENCFF650WVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB102BNU bradley-bernstein:DNA_Lib 3851 ENCFF650WVN HiSeq 2000 2016-11-26T01:23:34.158796+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB6qj03693Y2BB0bFXxg96 ENCSR771SNW https://www.encodeproject.org/experiments/ENCSR771SNW "transcription factor,chromatin remodeller" CBX8-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF500WMP https://www.encodeproject.org/files/ENCFF500WMP/@@download/ENCFF500WMP.bam ENCFF097MJR https://www.encodeproject.org/files/ENCFF097MJR/@@download/ENCFF097MJR.bam 28.2 M 0 25.5 M 0.904 SE 36 36 native 0.0 M 17.6 M 16.3 M 0.580 0.94 0.94 15.83 120 1.01 0.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2922db7-f82f-45a8-a933-041663ebb05d/@@download/cross_correlation_plot/ENCFF979OQS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB693NXV bradley-bernstein:DNA_Lib 3843 ENCFF979OQS HiSeq 2000 2016-11-26T01:23:20.441365+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB81Q03694jJVG35Fx48xG ENCSR771SNW https://www.encodeproject.org/experiments/ENCSR771SNW "transcription factor,chromatin remodeller" CBX8-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF746GKF https://www.encodeproject.org/files/ENCFF746GKF/@@download/ENCFF746GKF.bam ENCFF400CWI https://www.encodeproject.org/files/ENCFF400CWI/@@download/ENCFF400CWI.bam 31.2 M 0 23.8 M 0.763 SE 36 36 native 0.0 M 17.4 M 15.9 M 0.508 0.92 0.92 12.04 225 1.01 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/a51f85f9-feb2-4931-a2ff-820584659baf/@@download/cross_correlation_plot/ENCFF529XNL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB840AVY bradley-bernstein:DNA_Lib 2153 ENCFF529XNL HiSeq 2000 2016-11-26T01:23:05.908874+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB85Q0369KQ15V00X1qBgz ENCSR000AQK https://www.encodeproject.org/experiments/ENCSR000AQK "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF660BOQ https://www.encodeproject.org/files/ENCFF660BOQ/@@download/ENCFF660BOQ.bam ENCFF787ZFQ https://www.encodeproject.org/files/ENCFF787ZFQ/@@download/ENCFF787ZFQ.bam 87.3 M 0 71.5 M 0.819 SE 36 36 native 0.0 M 52.1 M 40.8 M 0.468 0.81 0.82 5.81 110 1.06 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/82d6f2bc-ca21-4873-b71c-c0aaf00756a0/@@download/cross_correlation_plot/ENCFF380VMM-ENCFF350FRQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695ACO,ENCLB695ACN" "bradley-bernstein:DNA_Lib 5210,bradley-bernstein:DNA_Lib 5211" "ENCFF380VMM,ENCFF350FRQ" Illumina Genome Analyzer IIx 2017-03-01T18:17:16.624671+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pvzV00369336Q1JgKPfx5g ENCSR000AQK https://www.encodeproject.org/experiments/ENCSR000AQK "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF652VQH https://www.encodeproject.org/files/ENCFF652VQH/@@download/ENCFF652VQH.bam ENCFF457MDU https://www.encodeproject.org/files/ENCFF457MDU/@@download/ENCFF457MDU.bam 85.4 M 0 83.8 M 0.981 SE 76 36 36 0.0 M 63.8 M 60.7 M 0.711 0.95 0.95 21.13 185 1.01 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fbb4a66-8036-4c15-99f4-c8b466dbedb8/@@download/cross_correlation_plot/ENCFF473ZWP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB979OGZ bradley-bernstein:DNA_Lib 7305 ENCFF473ZWP HiSeq 2500 2017-03-11T03:28:30.638346+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F31YxZj0369BY05q51Z510bV ENCSR000AVA https://www.encodeproject.org/experiments/ENCSR000AVA "transcription factor,chromatin remodeller,RNA binding protein" CHD7-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF844PQH https://www.encodeproject.org/files/ENCFF844PQH/@@download/ENCFF844PQH.bam ENCFF876WBK https://www.encodeproject.org/files/ENCFF876WBK/@@download/ENCFF876WBK.bam 44.4 M 0 37.0 M 0.833 SE 36 36 native 0.0 M 27.5 M 19.6 M 0.442 0.74 0.74 3.85 90 1.09 2.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/689bc726-c5fe-4789-976e-4e0891bc2882/@@download/cross_correlation_plot/ENCFF000AVL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALG bradley-bernstein:DNA_Lib 5213 ENCFF000AVL Illumina Genome Analyzer IIx 2016-12-11T10:39:11.461222+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166fQQ0369BgG8x1ygv1XpP ENCSR000AVA https://www.encodeproject.org/experiments/ENCSR000AVA "transcription factor,chromatin remodeller,RNA binding protein" CHD7-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF906SNA https://www.encodeproject.org/files/ENCFF906SNA/@@download/ENCFF906SNA.bam ENCFF123EBF https://www.encodeproject.org/files/ENCFF123EBF/@@download/ENCFF123EBF.bam 84.5 M 0 83.2 M 0.984 SE 36 36 native 0.0 M 66.3 M 55.1 M 0.652 0.83 0.83 5.96 170 1.03 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/de1d5b4e-6b34-4a63-af23-8faab7b72112/@@download/cross_correlation_plot/ENCFF580HUJ-ENCFF349SFU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB121UTD,ENCLB880ZVW" "bradley-bernstein:DNA_Lib 5540,bradley-bernstein:DNA_Lib 5541" "ENCFF580HUJ,ENCFF349SFU" HiSeq 2500 2016-12-11T11:40:29.701578+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166ff00369KbxV61z4GFx2x ENCSR000AMI https://www.encodeproject.org/experiments/ENCSR000AMI control Control-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF064DDT https://www.encodeproject.org/files/ENCFF064DDT/@@download/ENCFF064DDT.bam ENCFF401LXB https://www.encodeproject.org/files/ENCFF401LXB/@@download/ENCFF401LXB.bam 38.7 M 0 37.4 M 0.968 SE 36 36 native 0.0 M 27.3 M 27.1 M 0.700 0.99 0.99 175.16 195 1.01 0.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/d87da014-bc14-464c-be78-6fadbf2787be/@@download/cross_correlation_plot/ENCFF191QXK-ENCFF036EGF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB182YPD bradley-bernstein:DNA_Lib 2190 "ENCFF036EGF,ENCFF191QXK" HiSeq 2000 2016-10-29T04:23:12.291959+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1329yj03693q85b33Z6vXPZ ENCSR000AMI https://www.encodeproject.org/experiments/ENCSR000AMI control Control-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF504ZFN https://www.encodeproject.org/files/ENCFF504ZFN/@@download/ENCFF504ZFN.bam ENCFF344OKG https://www.encodeproject.org/files/ENCFF344OKG/@@download/ENCFF344OKG.bam 203.6 M 0 197.3 M 0.969 SE 36 36 native 0.0 M 151.4 M 142.3 M 0.699 0.94 0.94 17.69 175 1.01 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/2caf72d4-2326-46b4-9fdc-338ae7aedf93/@@download/cross_correlation_plot/ENCFF393KUX-ENCFF368CYL-ENCFF138KKQ-ENCFF472QMD-ENCFF064XIS-ENCFF635VQA-ENCFF763DAQ-ENCFF508ZFI-ENCFF659UFR-ENCFF145GCJ-ENCFF303YPV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB701ZDL,ENCLB997SYN,ENCLB778YWY,ENCLB967KMI,ENCLB197SAE,ENCLB082PCW" "bradley-bernstein:DNA_Lib 5685,bradley-bernstein:DNA_Lib 5345,bradley-bernstein:DNA_Lib 5572,bradley-bernstein:DNA_Lib 5440,bradley-bernstein:DNA_Lib 5339,bradley-bernstein:DNA_Lib 5573" "ENCFF393KUX,ENCFF763DAQ,ENCFF145GCJ,ENCFF472QMD,ENCFF138KKQ,ENCFF508ZFI,ENCFF635VQA,ENCFF368CYL,ENCFF659UFR,ENCFF064XIS,ENCFF303YPV" HiSeq 2500 2016-11-02T17:17:56.967466+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Gbgqj03692k0X1Jb9xF8Z6 ENCSR000AMI https://www.encodeproject.org/experiments/ENCSR000AMI control Control-human H1-hESC stem cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF234FUH https://www.encodeproject.org/files/ENCFF234FUH/@@download/ENCFF234FUH.bam ENCFF452JET https://www.encodeproject.org/files/ENCFF452JET/@@download/ENCFF452JET.bam 71.1 M 0 67.7 M 0.952 SE 76 76 native 0.0 M 59.8 M 57.9 M 0.814 0.97 0.97 37.59 260 1.00 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6d3965e-2423-47a2-a399-2aebadf76963/@@download/cross_correlation_plot/ENCFF805KPU-ENCFF809ZPN-ENCFF164ZWM-ENCFF740ECI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB038EWS,ENCLB261FLT" "bradley-bernstein:DNA_Lib 7361,bradley-bernstein:DNA_Lib 7281" "ENCFF164ZWM,ENCFF740ECI,ENCFF805KPU,ENCFF809ZPN" HiSeq 2500 2016-10-29T04:26:08.693368+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v9jQ0369GJ6xQfbB7FVjG ENCSR000AMI https://www.encodeproject.org/experiments/ENCSR000AMI control Control-human H1-hESC stem cell 4 bradley-bernstein ENCODE2 GRCh38 ENCFF473WBH https://www.encodeproject.org/files/ENCFF473WBH/@@download/ENCFF473WBH.bam ENCFF994DDP https://www.encodeproject.org/files/ENCFF994DDP/@@download/ENCFF994DDP.bam 39.4 M 0 37.7 M 0.957 SE 76 76 native 0.0 M 33.2 M 30.8 M 0.780 0.93 0.93 14.07 200 1.01 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f1ab1c4-840a-4ea1-9b75-b2a74489a70b/@@download/cross_correlation_plot/ENCFF689EIT-ENCFF663FLW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB839IKQ bradley-bernstein:DNA_Lib 7314 "ENCFF689EIT,ENCFF663FLW" HiSeq 2500 2016-11-03T22:08:57.735826+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JZ8Z003692k0X1Jb9xFQx9 ENCSR000ASY https://www.encodeproject.org/experiments/ENCSR000ASY "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF436ZJR https://www.encodeproject.org/files/ENCFF436ZJR/@@download/ENCFF436ZJR.bam ENCFF108SNW https://www.encodeproject.org/files/ENCFF108SNW/@@download/ENCFF108SNW.bam 38.9 M 0 35.2 M 0.905 SE 36 36 native 0.0 M 28.0 M 14.6 M 0.375 0.56 0.55 2.21 210 1.15 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/bce43f78-31e2-47f6-b330-9b2708cec583/@@download/cross_correlation_plot/ENCFF000AVZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APE bradley-bernstein:DNA_Lib 1660 ENCFF000AVZ HiSeq 2000 2016-12-11T08:35:56.932625+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166VGQ03695F8Bk64ff078Q ENCSR000ASY https://www.encodeproject.org/experiments/ENCSR000ASY "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF136XOW https://www.encodeproject.org/files/ENCFF136XOW/@@download/ENCFF136XOW.bam ENCFF160ICH https://www.encodeproject.org/files/ENCFF160ICH/@@download/ENCFF160ICH.bam 70.6 M 0 56.8 M 0.805 SE 36 36 native 0.0 M 42.8 M 32.8 M 0.465 0.79 0.80 5.26 175 1.05 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/772ccc0b-a95f-4a1a-be18-1d115c407ab0/@@download/cross_correlation_plot/ENCFF225ZAL-ENCFF090FUA-ENCFF458LKN-ENCFF000AWC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695APD,ENCLB322RFM" "bradley-bernstein:DNA_Lib 5323,bradley-bernstein:DNA_Lib 654" "ENCFF000AWC,ENCFF225ZAL,ENCFF458LKN,ENCFF090FUA" "Illumina Genome Analyzer IIx,HiSeq 2000" 2016-12-11T11:12:08.840166+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166VX80369KQ3Yk1yz1kj2Y ENCSR000APX https://www.encodeproject.org/experiments/ENCSR000APX "histone,histone modification,narrow histone mark" H2AFZ-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF673SFE https://www.encodeproject.org/files/ENCFF673SFE/@@download/ENCFF673SFE.bam ENCFF532SKM https://www.encodeproject.org/files/ENCFF532SKM/@@download/ENCFF532SKM.bam 48.4 M 0 47.3 M 0.979 SE 36 36 native 0.0 M 37.7 M 35.4 M 0.733 0.94 0.95 18.28 180 1.04 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/3432c229-9830-4b71-b58c-876036bfdcdb/@@download/cross_correlation_plot/ENCFF000AWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALE ENCFF000AWJ Illumina Genome Analyzer IIx 2016-11-13T02:20:01.165837+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygj3Q03691jKGBVGv8zgyq ENCSR000APX https://www.encodeproject.org/experiments/ENCSR000APX "histone,histone modification,narrow histone mark" H2AFZ-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF156BHJ https://www.encodeproject.org/files/ENCFF156BHJ/@@download/ENCFF156BHJ.bam ENCFF537BVW https://www.encodeproject.org/files/ENCFF537BVW/@@download/ENCFF537BVW.bam 43.2 M 0 41.8 M 0.966 SE 36 36 native 0.0 M 33.4 M 32.3 M 0.747 0.97 0.97 31.96 115 1.04 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b6b178f-385e-4204-9f94-0f7947dedf9a/@@download/cross_correlation_plot/ENCFF000AWI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALF ENCFF000AWI Illumina Genome Analyzer IIx 2016-11-13T02:19:45.195568+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygj8Q0369PxQkg0xY3Ppf0 ENCSR000ANP https://www.encodeproject.org/experiments/ENCSR000ANP "histone,histone modification,narrow histone mark" H3K27ac-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF238SQN https://www.encodeproject.org/files/ENCFF238SQN/@@download/ENCFF238SQN.bam ENCFF654RIP https://www.encodeproject.org/files/ENCFF654RIP/@@download/ENCFF654RIP.bam 23.2 M 0 19.4 M 0.834 SE 36 36 native 0.0 M 14.1 M 13.2 M 0.569 0.95 0.95 20.07 175 1.06 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/8812d378-d5ea-4dfd-8967-6942597ce957/@@download/cross_correlation_plot/ENCFF000AWR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIT ENCFF000AWR Illumina Genome Analyzer IIx 2016-11-13T00:46:25.588676+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YggpQ0369BZ4kqbvjGpjF7 ENCSR000ANP https://www.encodeproject.org/experiments/ENCSR000ANP "histone,histone modification,narrow histone mark" H3K27ac-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF242PAC https://www.encodeproject.org/files/ENCFF242PAC/@@download/ENCFF242PAC.bam ENCFF864UIC https://www.encodeproject.org/files/ENCFF864UIC/@@download/ENCFF864UIC.bam 19.2 M 0 16.9 M 0.884 SE 36 36 native 0.0 M 13.0 M 12.2 M 0.637 0.95 0.95 19.46 150 1.13 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/5be049f8-35d0-4b75-a1a0-39205bf5061c/@@download/cross_correlation_plot/ENCFF000AWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIS ENCFF000AWV Illumina Genome Analyzer IIe 2016-11-13T00:46:25.114437+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Yggyj03697B6KjJ0vkYzgq ENCSR000ALU https://www.encodeproject.org/experiments/ENCSR000ALU "histone,histone modification,broad histone mark" H3K27me3-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF270IOE https://www.encodeproject.org/files/ENCFF270IOE/@@download/ENCFF270IOE.bam ENCFF798VIO https://www.encodeproject.org/files/ENCFF798VIO/@@download/ENCFF798VIO.bam 8.3 M 0 7.6 M 0.908 SE 36 36 native 0.0 M 5.3 M 4.7 M 0.564 0.90 0.90 10.07 190 1.17 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/018f2074-3822-40c2-acc8-49c75872e1c6/@@download/cross_correlation_plot/ENCFF000AWX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANC ENCFF000AWX Illumina Genome Analyzer IIe 2016-11-13T02:20:07.723549+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgbQQ0369PxQkg0xY3PpZF ENCSR000ALU https://www.encodeproject.org/experiments/ENCSR000ALU "histone,histone modification,broad histone mark" H3K27me3-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF171RVK https://www.encodeproject.org/files/ENCFF171RVK/@@download/ENCFF171RVK.bam ENCFF706DOS https://www.encodeproject.org/files/ENCFF706DOS/@@download/ENCFF706DOS.bam 16.0 M 0 13.0 M 0.813 SE 36 36 native 0.0 M 9.3 M 8.7 M 0.547 0.95 0.95 19.06 160 1.15 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1e54082-8d84-431c-8d31-5296267cd81f/@@download/cross_correlation_plot/ENCFF000AWY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMZ ENCFF000AWY Illumina Genome Analyzer IIe 2016-11-13T00:46:27.147778+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygbf00369BZ4kqbvjGpj9G ENCSR000ANB https://www.encodeproject.org/experiments/ENCSR000ANB "histone,histone modification,broad histone mark" H3K36me3-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF247BVI https://www.encodeproject.org/files/ENCFF247BVI/@@download/ENCFF247BVI.bam ENCFF716JTQ https://www.encodeproject.org/files/ENCFF716JTQ/@@download/ENCFF716JTQ.bam 24.1 M 0 15.1 M 0.627 SE 36 36 native 0.0 M 10.1 M 9.7 M 0.403 0.97 0.97 37.49 160 1.04 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b2a6ec8-fbb0-4835-8c63-4275f55cae15/@@download/cross_correlation_plot/ENCFF000AXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIG ENCFF000AXG Illumina Genome Analyzer IIx 2016-11-13T00:46:24.518828+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygfq00369BZ4kqbvjGpjBB ENCSR000ANB https://www.encodeproject.org/experiments/ENCSR000ANB "histone,histone modification,broad histone mark" H3K36me3-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF204EVH https://www.encodeproject.org/files/ENCFF204EVH/@@download/ENCFF204EVH.bam ENCFF946HBP https://www.encodeproject.org/files/ENCFF946HBP/@@download/ENCFF946HBP.bam 16.7 M 0 15.1 M 0.902 SE 36 36 native 0.0 M 11.5 M 10.4 M 0.618 0.91 0.91 10.63 140 1.04 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/f192e0e3-06ed-448e-8533-045420d26ab2/@@download/cross_correlation_plot/ENCFF000AXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIH ENCFF000AXH Illumina Genome Analyzer IIe 2016-11-13T00:46:32.302122+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygfz803694p2jjB4qqvk6K ENCSR000ANA https://www.encodeproject.org/experiments/ENCSR000ANA "histone,histone modification,broad histone mark" H3K4me1-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF818MAU https://www.encodeproject.org/files/ENCFF818MAU/@@download/ENCFF818MAU.bam ENCFF903KMK https://www.encodeproject.org/files/ENCFF903KMK/@@download/ENCFF903KMK.bam 11.2 M 0 10.3 M 0.921 SE 36 36 native 0.0 M 8.1 M 7.4 M 0.654 0.91 0.91 11.36 130 1.14 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ce12e25-082a-4026-80d5-8d9f9c29c8ee/@@download/cross_correlation_plot/ENCFF000AXJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANI ENCFF000AXJ Illumina Genome Analyzer IIe 2016-11-13T00:46:00.688755+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgfX00369632125J8YQ231 ENCSR000ANA https://www.encodeproject.org/experiments/ENCSR000ANA "histone,histone modification,broad histone mark" H3K4me1-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF052LQE https://www.encodeproject.org/files/ENCFF052LQE/@@download/ENCFF052LQE.bam ENCFF014ZPV https://www.encodeproject.org/files/ENCFF014ZPV/@@download/ENCFF014ZPV.bam 24.0 M 0 19.8 M 0.823 SE 36 36 native 0.0 M 15.5 M 14.6 M 0.606 0.95 0.95 19.84 140 1.08 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/3bd05842-55c9-4c17-b484-812d0a564595/@@download/cross_correlation_plot/ENCFF000AXM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFH ENCFF000AXM Illumina Genome Analyzer IIx 2016-11-13T02:19:57.645045+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygff00369PxQkg0xY3PpbK ENCSR000ANC https://www.encodeproject.org/experiments/ENCSR000ANC "histone,histone modification,narrow histone mark" H3K4me2-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF694EXK https://www.encodeproject.org/files/ENCFF694EXK/@@download/ENCFF694EXK.bam ENCFF846GTQ https://www.encodeproject.org/files/ENCFF846GTQ/@@download/ENCFF846GTQ.bam 17.0 M 0 15.2 M 0.895 SE 36 36 native 0.0 M 11.8 M 11.3 M 0.668 0.96 0.96 27.79 150 1.30 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b1ae52a-9c04-41bb-8891-86074fa4546e/@@download/cross_correlation_plot/ENCFF000AXR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASO ENCFF000AXR Illumina Genome Analyzer IIx 2016-11-13T00:46:13.249838+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygg580369696p87G654vZv ENCSR000ANC https://www.encodeproject.org/experiments/ENCSR000ANC "histone,histone modification,narrow histone mark" H3K4me2-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF115ZGZ https://www.encodeproject.org/files/ENCFF115ZGZ/@@download/ENCFF115ZGZ.bam ENCFF728BDT https://www.encodeproject.org/files/ENCFF728BDT/@@download/ENCFF728BDT.bam 19.8 M 0 16.8 M 0.850 SE 36 36 native 0.0 M 13.6 M 12.6 M 0.635 0.93 0.93 15.16 165 1.44 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/005c9259-02b5-48d4-b580-90d2963b7fa3/@@download/cross_correlation_plot/ENCFF000AXQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASN ENCFF000AXQ Illumina Genome Analyzer IIe 2016-11-13T00:46:23.740487+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YggF80369BZ4kqbvjGpjBx ENCSR000AMG https://www.encodeproject.org/experiments/ENCSR000AMG "histone,histone modification,narrow histone mark" H3K4me3-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF571AXH https://www.encodeproject.org/files/ENCFF571AXH/@@download/ENCFF571AXH.bam ENCFF719JJB https://www.encodeproject.org/files/ENCFF719JJB/@@download/ENCFF719JJB.bam 8.0 M 0 7.2 M 0.906 SE 36 36 native 0.0 M 5.4 M 5.2 M 0.654 0.97 0.97 31.42 200 1.76 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0fc1ee9-2eb5-44be-9af0-3e6cfb53832f/@@download/cross_correlation_plot/ENCFF000AXS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUL ENCFF000AXS Illumina Genome Analyzer IIe 2016-08-13T01:48:39.734961+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg66GQ03690Px98j487Zjgx ENCSR000AMG https://www.encodeproject.org/experiments/ENCSR000AMG "histone,histone modification,narrow histone mark" H3K4me3-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF153RJP https://www.encodeproject.org/files/ENCFF153RJP/@@download/ENCFF153RJP.bam ENCFF574KEV https://www.encodeproject.org/files/ENCFF574KEV/@@download/ENCFF574KEV.bam 16.5 M 0 14.5 M 0.878 SE 36 36 native 0.0 M 10.6 M 10.2 M 0.622 0.97 0.97 33.88 155 1.26 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7bb7f5d-bc3b-479a-b147-d7a5201a7576/@@download/cross_correlation_plot/ENCFF000AXZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHJ ENCFF000AXZ Illumina Genome Analyzer IIe 2016-08-13T01:49:05.683876+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg66KQ03690fzPBZG8156fY ENCSR814XPE https://www.encodeproject.org/experiments/ENCSR814XPE "histone,histone modification,narrow histone mark" H3K4me3-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF775QSF https://www.encodeproject.org/files/ENCFF775QSF/@@download/ENCFF775QSF.bam ENCFF576XYN https://www.encodeproject.org/files/ENCFF576XYN/@@download/ENCFF576XYN.bam 34.9 M 0 34.1 M 0.977 SE 36 36 36 0.0 M 27.2 M 23.5 M 0.673 0.92 0.93 13.96 230 1.65 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb7fcfe1-61e9-46c1-8be3-8706398780c4/@@download/cross_correlation_plot/ENCFF156FYC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB893KQS bradley-bernstein:DNA_Lib 4790 ENCFF156FYC HiSeq 2000 2016-10-29T05:00:17.544496+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xZ1j0369BX1xqb1B818g9 ENCSR814XPE https://www.encodeproject.org/experiments/ENCSR814XPE "histone,histone modification,narrow histone mark" H3K4me3-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF262WSA https://www.encodeproject.org/files/ENCFF262WSA/@@download/ENCFF262WSA.bam ENCFF026OEX https://www.encodeproject.org/files/ENCFF026OEX/@@download/ENCFF026OEX.bam 74.6 M 0 72.8 M 0.976 SE 36 36 36 0.0 M 56.1 M 48.1 M 0.645 0.86 0.87 8.83 210 1.43 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/88966846-d6b8-4fdc-b911-e1f788a33552/@@download/cross_correlation_plot/ENCFF813UAU-ENCFF654NIP_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB872HOH,ENCLB790WEO" "bradley-bernstein:DNA_Lib 5545,bradley-bernstein:DNA_Lib 5544" "ENCFF654NIP,ENCFF813UAU" HiSeq 2500 2016-10-29T05:01:47.103405+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xZ6Q0369Gy59VJQ1KqBp4 ENCSR000APY https://www.encodeproject.org/experiments/ENCSR000APY "histone,histone modification,broad histone mark" H3K79me2-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF334FBV https://www.encodeproject.org/files/ENCFF334FBV/@@download/ENCFF334FBV.bam ENCFF503RMC https://www.encodeproject.org/files/ENCFF503RMC/@@download/ENCFF503RMC.bam 29.7 M 0 28.8 M 0.968 SE 36 36 native 0.0 M 22.9 M 20.4 M 0.687 0.90 0.90 10.02 125 1.10 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/8112e3e0-5760-4b78-8b83-f7f8f2e52fb2/@@download/cross_correlation_plot/ENCFF000AYD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUS ENCFF000AYD Illumina Genome Analyzer IIx 2016-11-13T00:46:35.834772+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgjP803694p2jjB4qqvk7F ENCSR000APY https://www.encodeproject.org/experiments/ENCSR000APY "histone,histone modification,broad histone mark" H3K79me2-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF965LBC https://www.encodeproject.org/files/ENCFF965LBC/@@download/ENCFF965LBC.bam ENCFF176PZN https://www.encodeproject.org/files/ENCFF176PZN/@@download/ENCFF176PZN.bam 45.8 M 0 42.7 M 0.931 SE 36 36 native 0.0 M 33.2 M 30.3 M 0.661 0.92 0.92 12.57 105 1.09 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/de5d0aff-30d2-4b4b-872a-11d4cf62829e/@@download/cross_correlation_plot/ENCFF000AYF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKS ENCFF000AYF Illumina Genome Analyzer 2016-11-13T02:19:40.527322+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgjYj036945pqjGJ4QpbkF ENCSR000AND https://www.encodeproject.org/experiments/ENCSR000AND "histone,histone modification,narrow histone mark" H3K9ac-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF707RSH https://www.encodeproject.org/files/ENCFF707RSH/@@download/ENCFF707RSH.bam ENCFF567DCK https://www.encodeproject.org/files/ENCFF567DCK/@@download/ENCFF567DCK.bam 21.9 M 0 16.8 M 0.769 SE 36 36 native 0.0 M 12.2 M 11.8 M 0.540 0.97 0.97 37.69 180 1.20 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f0bfda1-ce57-4130-b2a1-74436d739a4f/@@download/cross_correlation_plot/ENCFF000AYG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJB ENCFF000AYG Illumina Genome Analyzer IIx 2016-11-13T00:46:12.990123+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YggQQ0369PqYzGJbxQ6kGb ENCSR000AND https://www.encodeproject.org/experiments/ENCSR000AND "histone,histone modification,narrow histone mark" H3K9ac-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF101FLH https://www.encodeproject.org/files/ENCFF101FLH/@@download/ENCFF101FLH.bam ENCFF961CYT https://www.encodeproject.org/files/ENCFF961CYT/@@download/ENCFF961CYT.bam 20.4 M 0 17.0 M 0.831 SE 36 36 native 0.0 M 12.4 M 9.8 M 0.482 0.84 0.84 6.55 130 1.24 2.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/44607876-e9ed-4f29-9a50-cb1424ff6a03/@@download/cross_correlation_plot/ENCFF000AYH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJA ENCFF000AYH Illumina Genome Analyzer IIe 2016-11-13T00:46:17.846633+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YggZj0369PBFF2z0Pk0Q22 ENCSR000APZ https://www.encodeproject.org/experiments/ENCSR000APZ "histone,histone modification,broad histone mark" H3K9me3-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF669PQL https://www.encodeproject.org/files/ENCFF669PQL/@@download/ENCFF669PQL.bam ENCFF302DOV https://www.encodeproject.org/files/ENCFF302DOV/@@download/ENCFF302DOV.bam 32.4 M 0 31.3 M 0.967 SE 36 36 native 0.0 M 18.6 M 14.9 M 0.459 0.80 0.81 5.10 185 1.06 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/18abe881-cf9b-4a6f-a2c7-c79d0cd996dd/@@download/cross_correlation_plot/ENCFF000AWP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWI ENCFF000AWP Illumina Genome Analyzer IIx 2016-11-13T00:46:31.652715+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygjjj0369Kzkv2p8jPV5vq ENCSR000APZ https://www.encodeproject.org/experiments/ENCSR000APZ "histone,histone modification,broad histone mark" H3K9me3-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF230VQG https://www.encodeproject.org/files/ENCFF230VQG/@@download/ENCFF230VQG.bam ENCFF473PMW https://www.encodeproject.org/files/ENCFF473PMW/@@download/ENCFF473PMW.bam 41.6 M 0 39.3 M 0.944 SE 36 36 native 0.0 M 21.6 M 20.4 M 0.490 0.95 0.95 19.48 95 1.04 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a502dd4-8b2a-470a-b25c-031d3d618ff7/@@download/cross_correlation_plot/ENCFF000AWO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWH ENCFF000AWO Illumina Genome Analyzer IIx 2016-11-13T02:19:57.819555+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygjx003691jKGBVGv8zgz3 ENCSR000AMH https://www.encodeproject.org/experiments/ENCSR000AMH "histone,histone modification,broad histone mark" H4K20me1-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF890EPF https://www.encodeproject.org/files/ENCFF890EPF/@@download/ENCFF890EPF.bam ENCFF387RLX https://www.encodeproject.org/files/ENCFF387RLX/@@download/ENCFF387RLX.bam 21.5 M 0 17.5 M 0.812 SE 36 36 native 0.0 M 12.6 M 11.0 M 0.512 0.88 0.88 8.62 120 1.08 4.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/815ee55e-5ebf-4601-9d00-061a46edaf22/@@download/cross_correlation_plot/ENCFF000AYQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APQ ENCFF000AYQ Illumina Genome Analyzer IIe 2016-11-13T00:46:43.440530+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygbqj0369986BVPGZ1K1K4 ENCSR000AMH https://www.encodeproject.org/experiments/ENCSR000AMH "histone,histone modification,broad histone mark" H4K20me1-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF767VBX https://www.encodeproject.org/files/ENCFF767VBX/@@download/ENCFF767VBX.bam ENCFF326XZF https://www.encodeproject.org/files/ENCFF326XZF/@@download/ENCFF326XZF.bam 23.4 M 0 19.5 M 0.831 SE 36 36 native 0.0 M 14.6 M 13.5 M 0.575 0.93 0.93 14.50 120 1.03 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4146c1f-313a-4427-97bd-a8e3695b44f0/@@download/cross_correlation_plot/ENCFF000AYP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APP ENCFF000AYP Illumina Genome Analyzer IIe 2016-11-13T00:46:39.080487+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygf08036945J1QPjf6ZqP0 ENCSR000AVB https://www.encodeproject.org/experiments/ENCSR000AVB "transcription factor,chromatin remodeller" HDAC2-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF769PHM https://www.encodeproject.org/files/ENCFF769PHM/@@download/ENCFF769PHM.bam ENCFF256WJJ https://www.encodeproject.org/files/ENCFF256WJJ/@@download/ENCFF256WJJ.bam 51.5 M 0 40.5 M 0.785 SE 36 36 native 0.0 M 29.1 M 17.1 M 0.332 0.63 0.63 2.68 90 1.13 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/91419b52-2346-47d9-aae0-82e34ab9a924/@@download/cross_correlation_plot/ENCFF000AYV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASP bradley-bernstein:DNA_Lib 5219 ENCFF000AYV Illumina Genome Analyzer IIx 2016-12-11T04:55:39.554243+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165zGj0369KQ3Yk1yz1kgvx ENCSR000AVB https://www.encodeproject.org/experiments/ENCSR000AVB "transcription factor,chromatin remodeller" HDAC2-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF831LAD https://www.encodeproject.org/files/ENCFF831LAD/@@download/ENCFF831LAD.bam ENCFF061TDJ https://www.encodeproject.org/files/ENCFF061TDJ/@@download/ENCFF061TDJ.bam 32.8 M 0 32.2 M 0.981 SE 36 36 native 0.0 M 24.1 M 21.8 M 0.665 0.91 0.90 10.27 195 1.06 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/acfd6d38-f451-41bc-a633-95768bd4f279/@@download/cross_correlation_plot/ENCFF524BES.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB125QDM bradley-bernstein:DNA_Lib 5538 ENCFF524BES HiSeq 2500 2016-12-11T04:49:24.009855+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165zVj03698ZxQY8q63X878 ENCSR418RRF https://www.encodeproject.org/experiments/ENCSR418RRF "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF098PQX https://www.encodeproject.org/files/ENCFF098PQX/@@download/ENCFF098PQX.bam ENCFF265MNI https://www.encodeproject.org/files/ENCFF265MNI/@@download/ENCFF265MNI.bam 33.2 M 0 31.9 M 0.962 SE 36 36 native 0.0 M 23.9 M 20.6 M 0.621 0.86 0.86 6.93 180 1.04 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d131551-73f5-4bc5-bbb0-1a5843311171/@@download/cross_correlation_plot/ENCFF220HNB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB158GQW bradley-bernstein:DNA_Lib 5679 ENCFF220HNB HiSeq 2500 2016-11-26T01:23:42.012791+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB7gj03697fgyK1xFjYzBz ENCSR418RRF https://www.encodeproject.org/experiments/ENCSR418RRF "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF984CRF https://www.encodeproject.org/files/ENCFF984CRF/@@download/ENCFF984CRF.bam ENCFF513UKA https://www.encodeproject.org/files/ENCFF513UKA/@@download/ENCFF513UKA.bam 46.1 M 0 43.6 M 0.945 SE 36 36 native 0.0 M 31.0 M 29.1 M 0.632 0.94 0.95 22.13 255 1.07 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/5af7934c-6de8-470b-aaa6-3971f9c370f8/@@download/cross_correlation_plot/ENCFF935HUK-ENCFF503DAG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB693VHC,ENCLB126YGP" "bradley-bernstein:DNA_Lib 1605,bradley-bernstein:DNA_Lib 1620" "ENCFF935HUK,ENCFF503DAG" HiSeq 2000 2016-11-26T01:24:34.145432+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB7x0036923B6YykFJ0kQP ENCSR160ZLP https://www.encodeproject.org/experiments/ENCSR160ZLP "transcription factor,chromatin remodeller" KDM5A-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF538IYG https://www.encodeproject.org/files/ENCFF538IYG/@@download/ENCFF538IYG.bam ENCFF805DWT https://www.encodeproject.org/files/ENCFF805DWT/@@download/ENCFF805DWT.bam 42.9 M 0 33.8 M 0.788 SE 36 36 36 0.0 M 24.5 M 20.8 M 0.485 0.87 0.87 7.79 60 1.08 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb91b769-d119-433e-a718-05c0fa1f722d/@@download/cross_correlation_plot/ENCFF769WTD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAK bradley-bernstein:DNA_Lib 5226 ENCFF769WTD Illumina Genome Analyzer IIx 2017-01-12T23:51:29.650499+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1qzPp00369Gbf610XY85742 ENCSR160ZLP https://www.encodeproject.org/experiments/ENCSR160ZLP "transcription factor,chromatin remodeller" KDM5A-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF998WUZ https://www.encodeproject.org/files/ENCFF998WUZ/@@download/ENCFF998WUZ.bam ENCFF533YHC https://www.encodeproject.org/files/ENCFF533YHC/@@download/ENCFF533YHC.bam 47.9 M 0 47.0 M 0.980 SE 76 36 36 0.0 M 36.7 M 30.2 M 0.630 0.82 0.82 5.19 145 1.03 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/42ad0292-e9b3-439f-aee1-d8dc7816ce63/@@download/cross_correlation_plot/ENCFF281HTF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB160OTT bradley-bernstein:DNA_Lib 7310 ENCFF281HTF HiSeq 2500 2017-01-13T00:05:47.946466+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1qzPzQ0369G31gQ0Y6P4XjQ ENCSR157EOE https://www.encodeproject.org/experiments/ENCSR157EOE "transcription factor,chromatin remodeller" KDM5B-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF242VWT https://www.encodeproject.org/files/ENCFF242VWT/@@download/ENCFF242VWT.bam ENCFF235WZJ https://www.encodeproject.org/files/ENCFF235WZJ/@@download/ENCFF235WZJ.bam 66.5 M 0 63.6 M 0.957 SE 76 76 native 0.0 M 56.5 M 42.1 M 0.634 0.75 0.73 3.52 165 1.02 3.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2700499-8984-4570-9c49-988fe02dd4d0/@@download/cross_correlation_plot/ENCFF957DUJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB842RCY bradley-bernstein:DNA_Lib 7309 ENCFF957DUJ HiSeq 2500 2016-11-26T01:24:05.872214+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB9p003697fgyK1xFjYzGz ENCSR157EOE https://www.encodeproject.org/experiments/ENCSR157EOE "transcription factor,chromatin remodeller" KDM5B-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF306EUI https://www.encodeproject.org/files/ENCFF306EUI/@@download/ENCFF306EUI.bam ENCFF490IFL https://www.encodeproject.org/files/ENCFF490IFL/@@download/ENCFF490IFL.bam 36.0 M 0 34.7 M 0.966 SE 76 76 native 0.0 M 30.9 M 24.8 M 0.689 0.81 0.80 4.74 185 1.02 3.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1925ae1-e411-411f-b6ff-adc55d1a18ff/@@download/cross_correlation_plot/ENCFF975UNN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB269VHM bradley-bernstein:DNA_Lib 7278 ENCFF975UNN HiSeq 2500 2016-11-26T01:18:52.718326+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vBB00036923B6YykFJ0kVg ENCSR895AWR https://www.encodeproject.org/experiments/ENCSR895AWR "transcription factor,chromatin remodeller" KDM6A-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF349LAB https://www.encodeproject.org/files/ENCFF349LAB/@@download/ENCFF349LAB.bam ENCFF792NOG https://www.encodeproject.org/files/ENCFF792NOG/@@download/ENCFF792NOG.bam 28.4 M 0 27.0 M 0.952 SE 36 36 native 0.0 M 20.7 M 20.3 M 0.713 0.98 0.98 50.24 210 1.04 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e9cb110-4eaf-42c0-b4bf-824a2baba653/@@download/cross_correlation_plot/ENCFF627OOT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB253YZQ bradley-bernstein:DNA_Lib 1606 ENCFF627OOT HiSeq 2000 2016-11-26T01:24:07.500022+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB6G80369KQ15V00X1qBf3 ENCSR895AWR https://www.encodeproject.org/experiments/ENCSR895AWR "transcription factor,chromatin remodeller" KDM6A-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF745BRI https://www.encodeproject.org/files/ENCFF745BRI/@@download/ENCFF745BRI.bam ENCFF315RWM https://www.encodeproject.org/files/ENCFF315RWM/@@download/ENCFF315RWM.bam 25.0 M 0 24.5 M 0.979 SE 36 36 native 0.0 M 19.1 M 17.1 M 0.683 0.89 0.89 9.03 190 1.02 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef74d099-3324-4bf9-86b4-d514ecb7233c/@@download/cross_correlation_plot/ENCFF397SOK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB413AWK bradley-bernstein:DNA_Lib 5682 ENCFF397SOK HiSeq 2500 2016-11-26T01:23:55.365243+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB6Q8036923B6YykFJ0kPg ENCSR591AOD https://www.encodeproject.org/experiments/ENCSR591AOD "transcription factor,chromatin remodeller" PAF1-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF944BYB https://www.encodeproject.org/files/ENCFF944BYB/@@download/ENCFF944BYB.bam ENCFF011PIR https://www.encodeproject.org/files/ENCFF011PIR/@@download/ENCFF011PIR.bam 38.2 M 0 33.6 M 0.880 SE 76 76 native 0.0 M 29.9 M 28.1 M 0.736 0.94 0.94 17.61 190 1.01 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f8eb102-2b2c-40af-a6d9-7c12986be1e2/@@download/cross_correlation_plot/ENCFF119FUG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB447QBL bradley-bernstein:DNA_Lib 7356 ENCFF119FUG HiSeq 2500 2016-11-26T01:23:57.169835+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB8v0036923B6YykFJ0kV3 ENCSR591AOD https://www.encodeproject.org/experiments/ENCSR591AOD "transcription factor,chromatin remodeller" PAF1-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF065CRS https://www.encodeproject.org/files/ENCFF065CRS/@@download/ENCFF065CRS.bam ENCFF387CHB https://www.encodeproject.org/files/ENCFF387CHB/@@download/ENCFF387CHB.bam 41.5 M 0 35.0 M 0.841 SE 76 76 native 0.0 M 31.0 M 28.9 M 0.696 0.93 0.93 15.16 200 1.01 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/1886cfef-37bd-4a3f-b166-409a8f65250e/@@download/cross_correlation_plot/ENCFF688DCO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB816NFY bradley-bernstein:DNA_Lib 7359 ENCFF688DCO HiSeq 2500 2016-11-26T01:24:05.297960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB9080369Kyg1Z5bFkJkxk ENCSR000ATK https://www.encodeproject.org/experiments/ENCSR000ATK "transcription factor,chromatin remodeller,RNA binding protein" PHF8-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF365JHC https://www.encodeproject.org/files/ENCFF365JHC/@@download/ENCFF365JHC.bam ENCFF453ZBS https://www.encodeproject.org/files/ENCFF453ZBS/@@download/ENCFF453ZBS.bam 31.0 M 0 24.6 M 0.792 SE 36 36 native 0.0 M 18.3 M 13.3 M 0.429 0.74 0.74 3.73 110 1.41 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/47f01a2c-0f10-494a-9fb0-c281065324e3/@@download/cross_correlation_plot/ENCFF000AZT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKF bradley-bernstein:DNA_Lib 5233 ENCFF000AZT Illumina Genome Analyzer IIx 2016-12-10T19:14:39.399296+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162V2Q0369F4yf5544b18XX ENCSR000ATK https://www.encodeproject.org/experiments/ENCSR000ATK "transcription factor,chromatin remodeller,RNA binding protein" PHF8-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF992JEQ https://www.encodeproject.org/files/ENCFF992JEQ/@@download/ENCFF992JEQ.bam ENCFF234VFU https://www.encodeproject.org/files/ENCFF234VFU/@@download/ENCFF234VFU.bam 28.0 M 0 27.4 M 0.978 SE 36 36 native 0.0 M 21.3 M 18.6 M 0.664 0.87 0.87 7.46 180 1.08 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/12968a47-7338-4650-90f4-9775a9d776c4/@@download/cross_correlation_plot/ENCFF346JZZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB886VMM bradley-bernstein:DNA_Lib 5676 ENCFF346JZZ HiSeq 2500 2016-12-10T19:29:25.934986+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162V7003695yqvv8q311Q6G ENCSR000AQC https://www.encodeproject.org/experiments/ENCSR000AQC "transcription factor,chromatin remodeller,RNA binding protein" RBBP5-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF491ABD https://www.encodeproject.org/files/ENCFF491ABD/@@download/ENCFF491ABD.bam ENCFF018QOY https://www.encodeproject.org/files/ENCFF018QOY/@@download/ENCFF018QOY.bam 43.8 M 0 33.5 M 0.766 SE 36 36 native 0.0 M 23.5 M 21.2 M 0.485 0.93 0.93 13.55 80 1.07 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/2b001440-4fde-4a77-8beb-fe1188445171/@@download/cross_correlation_plot/ENCFF720HOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVD bradley-bernstein:DNA_Lib 5237 ENCFF720HOL Illumina Genome Analyzer IIx 2017-03-06T16:58:06.124911+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vx2300369PQK2Q3gXGfyyB ENCSR000AQC https://www.encodeproject.org/experiments/ENCSR000AQC "transcription factor,chromatin remodeller,RNA binding protein" RBBP5-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF195XAG https://www.encodeproject.org/files/ENCFF195XAG/@@download/ENCFF195XAG.bam ENCFF074CHR https://www.encodeproject.org/files/ENCFF074CHR/@@download/ENCFF074CHR.bam 34.5 M 0 29.1 M 0.841 SE 36 36 native 0.0 M 22.1 M 11.9 M 0.345 0.57 0.56 2.21 90 1.31 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/a65ff07f-4efc-4e4f-beb8-1adfc0411b93/@@download/cross_correlation_plot/ENCFF279SFM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVC bradley-bernstein:DNA_Lib 5238 ENCFF279SFM Illumina Genome Analyzer IIx 2017-03-06T16:55:10.935778+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vx29j0369PfPf73g8kqZbK ENCSR663WAR https://www.encodeproject.org/experiments/ENCSR663WAR "transcription factor,chromatin remodeller" REST-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF031TYH https://www.encodeproject.org/files/ENCFF031TYH/@@download/ENCFF031TYH.bam ENCFF925ASI https://www.encodeproject.org/files/ENCFF925ASI/@@download/ENCFF925ASI.bam 36.1 M 0 35.4 M 0.981 SE 76 36 36 0.0 M 27.5 M 25.9 M 0.718 0.94 0.95 18.81 220 1.09 2.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b0b9513-a917-4513-8ff0-510a64ab98a6/@@download/cross_correlation_plot/ENCFF079NVQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB706HVA bradley-bernstein:DNA_Lib 7303 ENCFF079NVQ HiSeq 2500 2016-11-25T20:40:08.909516+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyYy803695ZXZ1g5QQy270 ENCSR663WAR https://www.encodeproject.org/experiments/ENCSR663WAR "transcription factor,chromatin remodeller" REST-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF277PVA https://www.encodeproject.org/files/ENCFF277PVA/@@download/ENCFF277PVA.bam ENCFF594NNJ https://www.encodeproject.org/files/ENCFF594NNJ/@@download/ENCFF594NNJ.bam 30.3 M 0 27.5 M 0.907 SE 36 36 native 0.0 M 18.7 M 18.0 M 0.593 0.97 0.97 31.83 220 1.11 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d79c5c61-4ce0-4901-9f2e-2ca5a1253199/@@download/cross_correlation_plot/ENCFF794IGW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB933RWS bradley-bernstein:DNA_Lib 3850 ENCFF794IGW HiSeq 2000 2016-11-25T03:05:26.060924+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qV4yj036923B6YykFJ0bB0 ENCSR882AWL https://www.encodeproject.org/experiments/ENCSR882AWL "transcription factor,chromatin remodeller" RING1-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF615UTM https://www.encodeproject.org/files/ENCFF615UTM/@@download/ENCFF615UTM.bam ENCFF088ZHS https://www.encodeproject.org/files/ENCFF088ZHS/@@download/ENCFF088ZHS.bam 39.3 M 0 37.7 M 0.959 SE 76 76 native 0.0 M 33.5 M 29.6 M 0.754 0.89 0.88 8.45 180 1.01 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/d55567f4-bff7-4fa8-9d5f-d0853b4fdf6e/@@download/cross_correlation_plot/ENCFF708SMC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB059LGY bradley-bernstein:DNA_Lib 7312 ENCFF708SMC HiSeq 2500 2016-11-26T01:18:50.369354+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vBB600369KQ15V00X1qBkq ENCSR882AWL https://www.encodeproject.org/experiments/ENCSR882AWL "transcription factor,chromatin remodeller" RING1-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF542MVD https://www.encodeproject.org/files/ENCFF542MVD/@@download/ENCFF542MVD.bam ENCFF812BRA https://www.encodeproject.org/files/ENCFF812BRA/@@download/ENCFF812BRA.bam 42.3 M 0 39.9 M 0.942 SE 76 76 native 0.0 M 35.7 M 32.8 M 0.775 0.92 0.92 12.19 195 1.01 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/f98bd81d-e622-4d61-9f86-62aeeb91d5b1/@@download/cross_correlation_plot/ENCFF935SOR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB762VPL bradley-bernstein:DNA_Lib 7360 ENCFF935SOR HiSeq 2500 2016-11-26T01:18:51.080589+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vBBG003698X1qkv5Qyzy8z ENCSR784VUY https://www.encodeproject.org/experiments/ENCSR784VUY "transcription factor,chromatin remodeller" RNF2-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF354ELR https://www.encodeproject.org/files/ENCFF354ELR/@@download/ENCFF354ELR.bam ENCFF262QYW https://www.encodeproject.org/files/ENCFF262QYW/@@download/ENCFF262QYW.bam 27.9 M 0 25.6 M 0.919 SE 36 36 native 0.0 M 17.2 M 16.9 M 0.608 0.99 0.99 78.29 140 1.01 0.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/2139420e-1947-4d7d-a9d7-e19f58630940/@@download/cross_correlation_plot/ENCFF517QCO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB770HAP bradley-bernstein:DNA_Lib 3842 ENCFF517QCO HiSeq 2000 2016-11-26T01:23:43.649842+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB7080369KQ15V00X1qBfV ENCSR784VUY https://www.encodeproject.org/experiments/ENCSR784VUY "transcription factor,chromatin remodeller" RNF2-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF180DGV https://www.encodeproject.org/files/ENCFF180DGV/@@download/ENCFF180DGV.bam ENCFF246RPY https://www.encodeproject.org/files/ENCFF246RPY/@@download/ENCFF246RPY.bam 37.2 M 0 35.6 M 0.958 SE 36 36 native 0.0 M 25.5 M 9.9 M 0.265 0.42 0.41 1.73 280 1.14 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/c745f27b-d489-4cee-9ec8-3b237b207221/@@download/cross_correlation_plot/ENCFF420XPW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB619PPT bradley-bernstein:DNA_Lib 1484 ENCFF420XPW HiSeq 2000 2016-11-26T01:23:38.275051+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB77803698466zzVF9GYZf ENCSR000ATR https://www.encodeproject.org/experiments/ENCSR000ATR "transcription factor,chromatin remodeller" SAP30-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF154NVP https://www.encodeproject.org/files/ENCFF154NVP/@@download/ENCFF154NVP.bam ENCFF095ISN https://www.encodeproject.org/files/ENCFF095ISN/@@download/ENCFF095ISN.bam 35.4 M 0 13.9 M 0.391 SE 36 36 native 0.0 M 10.6 M 6.8 M 0.192 0.67 0.66 2.74 185 1.30 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/53635cf0-31d6-4438-9432-aaddfbf5304d/@@download/cross_correlation_plot/ENCFF270OEH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHC bradley-bernstein:DNA_Lib 5242 ENCFF270OEH Illumina Genome Analyzer IIx 2017-03-01T18:15:23.494341+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pxj2003699BZbbKgQbY2Pv ENCSR000ATR https://www.encodeproject.org/experiments/ENCSR000ATR "transcription factor,chromatin remodeller" SAP30-human H1-hESC stem cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF990APU https://www.encodeproject.org/files/ENCFF990APU/@@download/ENCFF990APU.bam ENCFF406EED https://www.encodeproject.org/files/ENCFF406EED/@@download/ENCFF406EED.bam 12.7 M 0 11.7 M 0.918 SE 36 36 native 0.0 M 8.7 M 8.5 M 0.669 0.98 0.98 49.85 150 1.02 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ddc465c-aa97-4b28-9937-248eeaa8eca7/@@download/cross_correlation_plot/ENCFF622UBZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB567NZA bradley-bernstein:DNA_Lib 5433 ENCFF622UBZ HiSeq 2500 2016-12-10T17:49:44.727310+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162VVj0369Bxb30J6x5bZ0K ENCSR000ATS https://www.encodeproject.org/experiments/ENCSR000ATS "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human H1-hESC stem cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF481HLX https://www.encodeproject.org/files/ENCFF481HLX/@@download/ENCFF481HLX.bam ENCFF534JYP https://www.encodeproject.org/files/ENCFF534JYP/@@download/ENCFF534JYP.bam 114.6 M 0 103.6 M 0.904 SE 36 36 native 0.0 M 77.5 M 69.7 M 0.608 0.91 0.92 12.29 205 1.04 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/e478cdfe-d2fd-4c34-967d-9e28f1b08211/@@download/cross_correlation_plot/ENCFF061EJH-ENCFF252NFT-ENCFF523HNT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695ACT,ENCLB768RIW,ENCLB677NUO" "bradley-bernstein:DNA_Lib 5246,bradley-bernstein:DNA_Lib 653,bradley-bernstein:DNA_Lib 652" "ENCFF523HNT,ENCFF252NFT,ENCFF061EJH" "Illumina Genome Analyzer IIx,HiSeq 2000" 2017-03-06T17:29:01.431657+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vkx5j0369868pB7FPzkk87 ENCSR000ATS https://www.encodeproject.org/experiments/ENCSR000ATS "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human H1-hESC stem cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF579UZO https://www.encodeproject.org/files/ENCFF579UZO/@@download/ENCFF579UZO.bam ENCFF852EMR https://www.encodeproject.org/files/ENCFF852EMR/@@download/ENCFF852EMR.bam 63.9 M 0 61.9 M 0.968 SE 76 36 36 0.0 M 48.2 M 32.1 M 0.502 0.67 0.64 2.45 175 1.04 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/348dbb8d-03f6-4d24-8590-bb145e4dc687/@@download/cross_correlation_plot/ENCFF003KFS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB866JSK bradley-bernstein:DNA_Lib 5809 ENCFF003KFS HiSeq 2500 2017-03-11T03:03:51.327904+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F31Yy4Q036969kxG6ZVB9XG4 ENCSR853NNZ https://www.encodeproject.org/experiments/ENCSR853NNZ "RNA binding protein,chromatin remodeller" WDR5-human H1-hESC stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF453CRJ https://www.encodeproject.org/files/ENCFF453CRJ/@@download/ENCFF453CRJ.bam ENCFF600EZM https://www.encodeproject.org/files/ENCFF600EZM/@@download/ENCFF600EZM.bam 42.8 M 0 37.4 M 0.874 SE 76 76 native 0.0 M 33.3 M 31.3 M 0.732 0.94 0.94 17.48 210 1.02 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a53127f-da67-4a8d-8413-0c0ec3d1a146/@@download/cross_correlation_plot/ENCFF954GUR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB225PWG bradley-bernstein:DNA_Lib 7357 ENCFF954GUR HiSeq 2500 2016-11-26T01:24:04.917703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB96j0369KQ15V00X1qBk0 ENCSR853NNZ https://www.encodeproject.org/experiments/ENCSR853NNZ "RNA binding protein,chromatin remodeller" WDR5-human H1-hESC stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF054WSM https://www.encodeproject.org/files/ENCFF054WSM/@@download/ENCFF054WSM.bam ENCFF821GTQ https://www.encodeproject.org/files/ENCFF821GTQ/@@download/ENCFF821GTQ.bam 36.1 M 0 35.2 M 0.975 SE 76 76 native 0.0 M 31.3 M 29.3 M 0.812 0.94 0.94 16.51 215 1.01 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f35433b-b723-4402-a20b-9b775c1cb63f/@@download/cross_correlation_plot/ENCFF805WZL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB103ROT bradley-bernstein:DNA_Lib 7276 ENCFF805WZL HiSeq 2500 2016-11-26T01:23:58.689955+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB9Bj03690qvfxGkZJb0VK ENCSR625CEM https://www.encodeproject.org/experiments/ENCSR625CEM control Control-human H9 stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF910JMV https://www.encodeproject.org/files/ENCFF910JMV/@@download/ENCFF910JMV.bam ENCFF181QVQ https://www.encodeproject.org/files/ENCFF181QVQ/@@download/ENCFF181QVQ.bam 54.1 M 0 50.9 M 0.941 SE 36 36 36 0.0 M 36.4 M 35.6 M 0.658 0.98 0.98 64.80 65 1.01 0.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/4336d70d-5c75-4b2c-b2e9-2991ce8bbac1/@@download/cross_correlation_plot/ENCFF533UCC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB504POG bradley-bernstein:DNA_Lib 3836 ENCFF533UCC HiSeq 2000 2017-01-09T16:52:23.752999+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kxg6j0369P4Vg0G4JKy37q ENCSR625CEM https://www.encodeproject.org/experiments/ENCSR625CEM control Control-human H9 stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF478PPT https://www.encodeproject.org/files/ENCFF478PPT/@@download/ENCFF478PPT.bam ENCFF902CRQ https://www.encodeproject.org/files/ENCFF902CRQ/@@download/ENCFF902CRQ.bam 67.3 M 0 64.0 M 0.951 SE 76 36 36 0.0 M 49.5 M 46.0 M 0.683 0.93 0.93 14.71 180 1.01 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6d1cd9d-5632-46ef-93c4-1ee04fd88d3e/@@download/cross_correlation_plot/ENCFF359BBF-ENCFF229SZZ-ENCFF876LYB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB499ENQ bradley-bernstein:DNA_Lib 6071 "ENCFF876LYB,ENCFF229SZZ,ENCFF359BBF" "HiSeq 2000,HiSeq 2500" 2017-01-09T22:31:27.456058+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kxgFj0369FxjKF7qzy2Zbb ENCSR566DVZ https://www.encodeproject.org/experiments/ENCSR566DVZ "histone,histone modification,narrow histone mark" H3K27ac-human H9 stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF596NFS https://www.encodeproject.org/files/ENCFF596NFS/@@download/ENCFF596NFS.bam ENCFF529SWR https://www.encodeproject.org/files/ENCFF529SWR/@@download/ENCFF529SWR.bam 46.3 M 0 43.8 M 0.947 SE 76 36 36 0.0 M 34.4 M 29.5 M 0.637 0.86 0.85 6.70 195 1.08 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/35cb978c-f16d-470c-8188-173dcefa5ddd/@@download/cross_correlation_plot/ENCFF613OTS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB460TXP bradley-bernstein:DNA_Lib 6068 ENCFF613OTS HiSeq 2500 2017-01-09T20:55:49.067091+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kxbGQ0369FxjKF7qzy2Zb8 ENCSR566DVZ https://www.encodeproject.org/experiments/ENCSR566DVZ "histone,histone modification,narrow histone mark" H3K27ac-human H9 stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF201SEL https://www.encodeproject.org/files/ENCFF201SEL/@@download/ENCFF201SEL.bam ENCFF988UIB https://www.encodeproject.org/files/ENCFF988UIB/@@download/ENCFF988UIB.bam 51.8 M 0 48.7 M 0.940 SE 36 36 36 0.0 M 37.6 M 32.2 M 0.620 0.87 0.87 7.33 215 1.03 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf81409f-a732-4a5b-8f4f-2b1ebb7d928e/@@download/cross_correlation_plot/ENCFF149OGB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB117FDC bradley-bernstein:DNA_Lib 3093 ENCFF149OGB HiSeq 2000 2017-01-09T21:13:35.008726+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kxbV00369752Vb2YqXp1F3 ENCSR754VAJ https://www.encodeproject.org/experiments/ENCSR754VAJ "histone,histone modification,broad histone mark" H3K27me3-human H9 stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF047FAU https://www.encodeproject.org/files/ENCFF047FAU/@@download/ENCFF047FAU.bam ENCFF564GMV https://www.encodeproject.org/files/ENCFF564GMV/@@download/ENCFF564GMV.bam 29.7 M 0 22.9 M 0.769 SE 36 36 36 0.0 M 13.6 M 5.3 M 0.177 0.44 0.45 2.04 335 1.17 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/4989b836-e3d8-4cbb-bda6-03d8945228fb/@@download/cross_correlation_plot/ENCFF942UDZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB533UET bradley-bernstein:DNA_Lib 3122 ENCFF942UDZ HiSeq 2000 2016-12-14T18:54:17.700651+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F187zfj0369F1Xbp2BQqJjPy ENCSR754VAJ https://www.encodeproject.org/experiments/ENCSR754VAJ "histone,histone modification,broad histone mark" H3K27me3-human H9 stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF031QAI https://www.encodeproject.org/files/ENCFF031QAI/@@download/ENCFF031QAI.bam ENCFF515KVD https://www.encodeproject.org/files/ENCFF515KVD/@@download/ENCFF515KVD.bam 60.5 M 0 53.8 M 0.889 SE 76 36 36 0.0 M 41.6 M 30.5 M 0.504 0.73 0.72 3.41 165 1.03 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b4c088b-b0ea-4ebe-987b-6146f4b0337d/@@download/cross_correlation_plot/ENCFF007RAN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB305TVL bradley-bernstein:DNA_Lib 6065 ENCFF007RAN HiSeq 2500 2016-12-14T23:47:02.364304+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F187zyj0369F1Xbp2BQqJjQ6 ENCSR870IUC https://www.encodeproject.org/experiments/ENCSR870IUC "histone,histone modification,broad histone mark" H3K36me3-human H9 stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF990UKW https://www.encodeproject.org/files/ENCFF990UKW/@@download/ENCFF990UKW.bam ENCFF396TVM https://www.encodeproject.org/files/ENCFF396TVM/@@download/ENCFF396TVM.bam 44.3 M 0 42.0 M 0.948 SE 76 36 36 0.0 M 31.2 M 29.6 M 0.668 0.95 0.95 19.25 175 1.01 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/8dbf97f2-fc58-4564-b8b5-352af7a22442/@@download/cross_correlation_plot/ENCFF053JOS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB540MMT bradley-bernstein:DNA_Lib 6070 ENCFF053JOS HiSeq 2500 2016-12-14T18:56:26.857510+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1880b80369F00q32BFF7470 ENCSR870IUC https://www.encodeproject.org/experiments/ENCSR870IUC "histone,histone modification,broad histone mark" H3K36me3-human H9 stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF364UEA https://www.encodeproject.org/files/ENCFF364UEA/@@download/ENCFF364UEA.bam ENCFF246JPS https://www.encodeproject.org/files/ENCFF246JPS/@@download/ENCFF246JPS.bam 27.9 M 0 24.6 M 0.884 SE 36 36 36 0.0 M 16.8 M 9.6 M 0.345 0.61 0.58 2.23 215 1.04 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9f800a8-23e7-4b04-aef0-4a6ac37e6cd6/@@download/cross_correlation_plot/ENCFF347SIP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB006TOQ bradley-bernstein:DNA_Lib 3094 ENCFF347SIP HiSeq 2000 2016-12-14T18:55:50.059779+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1880q003695ZjjX2BpbF4kY ENCSR967HXD https://www.encodeproject.org/experiments/ENCSR967HXD "histone,histone modification,broad histone mark" H3K4me1-human H9 stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF743GJA https://www.encodeproject.org/files/ENCFF743GJA/@@download/ENCFF743GJA.bam ENCFF230NBK https://www.encodeproject.org/files/ENCFF230NBK/@@download/ENCFF230NBK.bam 49.6 M 0 46.9 M 0.946 SE 36 36 36 0.0 M 36.4 M 32.0 M 0.646 0.89 0.89 8.96 200 1.03 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d3cc5fc-f9f7-458f-9958-437382180b4a/@@download/cross_correlation_plot/ENCFF625FYD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB803FLC bradley-bernstein:DNA_Lib 3090 ENCFF625FYD HiSeq 2000 2017-01-05T20:06:01.837018+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1p1vZ803692ZFYJGFPF08jq ENCSR967HXD https://www.encodeproject.org/experiments/ENCSR967HXD "histone,histone modification,broad histone mark" H3K4me1-human H9 stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF506GVQ https://www.encodeproject.org/files/ENCFF506GVQ/@@download/ENCFF506GVQ.bam ENCFF581THE https://www.encodeproject.org/files/ENCFF581THE/@@download/ENCFF581THE.bam 47.8 M 0 45.7 M 0.956 SE 76 36 36 0.0 M 36.5 M 33.8 M 0.707 0.93 0.92 13.15 190 1.02 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/54460825-5cde-46ac-b9dd-b86148a204cb/@@download/cross_correlation_plot/ENCFF626XCW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB264PLF bradley-bernstein:DNA_Lib 6067 ENCFF626XCW HiSeq 2500 2016-12-14T19:00:01.733309+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1p1vk80369GZ0V250f2yg7k ENCSR716ZJH https://www.encodeproject.org/experiments/ENCSR716ZJH "histone,histone modification,narrow histone mark" H3K4me3-human H9 stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF556EHG https://www.encodeproject.org/files/ENCFF556EHG/@@download/ENCFF556EHG.bam ENCFF244ANJ https://www.encodeproject.org/files/ENCFF244ANJ/@@download/ENCFF244ANJ.bam 44.3 M 0 41.9 M 0.947 SE 76 36 36 0.0 M 32.3 M 30.1 M 0.680 0.93 0.93 15.45 185 1.19 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/96e4b508-0bd0-42f7-a04b-910496d8a808/@@download/cross_correlation_plot/ENCFF562FPJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB580NFP bradley-bernstein:DNA_Lib 6069 ENCFF562FPJ HiSeq 2500 2017-01-09T21:13:23.168855+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kxxpQ0369BVx998v4QKXkZ ENCSR716ZJH https://www.encodeproject.org/experiments/ENCSR716ZJH "histone,histone modification,narrow histone mark" H3K4me3-human H9 stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF678EYS https://www.encodeproject.org/files/ENCFF678EYS/@@download/ENCFF678EYS.bam ENCFF338OVL https://www.encodeproject.org/files/ENCFF338OVL/@@download/ENCFF338OVL.bam 32.4 M 0 30.3 M 0.935 SE 36 36 native 0.0 M 21.3 M 20.2 M 0.625 0.96 0.96 27.94 210 1.39 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/50a797ae-045d-4b28-98f8-1295be5875d2/@@download/cross_correlation_plot/ENCFF744CHR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB917LJA bradley-bernstein:DNA_Lib 3828 ENCFF744CHR HiSeq 2000 2016-11-15T17:21:04.733224+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b5VPQ036953q5qVQkfK7FV ENCSR516KSY https://www.encodeproject.org/experiments/ENCSR516KSY "histone,histone modification,broad histone mark" H3K9me3-human H9 stem cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF463NOP https://www.encodeproject.org/files/ENCFF463NOP/@@download/ENCFF463NOP.bam ENCFF393YAZ https://www.encodeproject.org/files/ENCFF393YAZ/@@download/ENCFF393YAZ.bam 27.7 M 0 25.1 M 0.909 SE 36 36 36 0.0 M 12.6 M 12.3 M 0.445 0.98 0.98 61.15 170 1.02 0.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/11021fc3-6210-41e9-bbab-024a62da96b8/@@download/cross_correlation_plot/ENCFF318GUA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB553JHB bradley-bernstein:DNA_Lib 3829 ENCFF318GUA HiSeq 2000 2016-12-14T18:59:07.727771+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1884680369G1Z412B01Qv6j ENCSR516KSY https://www.encodeproject.org/experiments/ENCSR516KSY "histone,histone modification,broad histone mark" H3K9me3-human H9 stem cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF436WTK https://www.encodeproject.org/files/ENCFF436WTK/@@download/ENCFF436WTK.bam ENCFF898EBM https://www.encodeproject.org/files/ENCFF898EBM/@@download/ENCFF898EBM.bam 44.7 M 0 42.0 M 0.940 SE 76 36 36 0.0 M 28.5 M 27.8 M 0.622 0.97 0.97 39.48 190 1.01 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/90769b3e-3690-4055-9e4e-1e1ee70b113e/@@download/cross_correlation_plot/ENCFF029RJH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB510GSI bradley-bernstein:DNA_Lib 6066 ENCFF029RJH HiSeq 2500 2016-12-14T18:59:51.211701+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1884FQ0369J92qZ2Bf622zb ENCSR198WIH https://www.encodeproject.org/experiments/ENCSR198WIH control Control-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF889VIV https://www.encodeproject.org/files/ENCFF889VIV/@@download/ENCFF889VIV.bam ENCFF745NAF https://www.encodeproject.org/files/ENCFF745NAF/@@download/ENCFF745NAF.bam 34.6 M 0 34.0 M 0.980 SE 36 36 None 0.0 M 25.9 M 25.1 M 0.724 0.97 0.97 38.40 180 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/e17228a9-a529-478a-8d2a-30f5d45178c9/@@download/cross_correlation_plot/ENCFF413RQG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB149OYB bradley-bernstein:DNA_Lib 3764 ENCFF413RQG HiSeq 2000 2016-11-18T04:46:18.802605+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq80Q0369J44Fjx82zx7Q8 ENCSR198WIH https://www.encodeproject.org/experiments/ENCSR198WIH control Control-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF064LQH https://www.encodeproject.org/files/ENCFF064LQH/@@download/ENCFF064LQH.bam ENCFF373OZW https://www.encodeproject.org/files/ENCFF373OZW/@@download/ENCFF373OZW.bam 71.0 M 0 68.9 M 0.971 SE 76 36 36 0.0 M 52.8 M 47.9 M 0.675 0.91 0.91 11.01 210 1.01 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/f45f4756-2183-44d9-8518-f16db7b6253e/@@download/cross_correlation_plot/ENCFF796ERZ-ENCFF957PGR-ENCFF048ZOQ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB497WAJ bradley-bernstein:DNA_Lib 6195 "ENCFF957PGR,ENCFF048ZOQ,ENCFF796ERZ" HiSeq 2500 2016-11-15T23:52:43.670839+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bbX280369Fbg36VZ8Kyy0Z ENCSR227XNT https://www.encodeproject.org/experiments/ENCSR227XNT "histone,histone modification,narrow histone mark" H2AFZ-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF775DFO https://www.encodeproject.org/files/ENCFF775DFO/@@download/ENCFF775DFO.bam ENCFF821NJM https://www.encodeproject.org/files/ENCFF821NJM/@@download/ENCFF821NJM.bam 70.3 M 0 68.6 M 0.976 SE 36 36 36 0.0 M 56.2 M 26.1 M 0.371 0.46 0.00 0.00 180 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/356f36cb-b8db-4ec3-baf0-0e1d1a62a37a/@@download/cross_correlation_plot/ENCFF023NCH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB843PKP bradley-bernstein:DNA_Lib 5481 ENCFF023NCH HiSeq 2500 2017-01-13T19:04:02.818319+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vPkbQ03698PJzJKbxqjpfp ENCSR227XNT https://www.encodeproject.org/experiments/ENCSR227XNT "histone,histone modification,narrow histone mark" H2AFZ-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF662QBN https://www.encodeproject.org/files/ENCFF662QBN/@@download/ENCFF662QBN.bam ENCFF801EEB https://www.encodeproject.org/files/ENCFF801EEB/@@download/ENCFF801EEB.bam 23.6 M 0 22.3 M 0.947 SE 76 36 36 0.0 M 17.3 M 16.9 M 0.720 0.98 0.98 57.93 205 1.03 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc6639d1-98b1-4da6-bdbf-e02ddcd32467/@@download/cross_correlation_plot/ENCFF643DDV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB447JUQ bradley-bernstein:DNA_Lib 6271 ENCFF643DDV HiSeq 2500 2017-01-13T19:47:13.350922+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vPkqj0369Gbf610XY85G2v ENCSR661KMA https://www.encodeproject.org/experiments/ENCSR661KMA "histone,histone modification,narrow histone mark" H3K27ac-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF689GKI https://www.encodeproject.org/files/ENCFF689GKI/@@download/ENCFF689GKI.bam ENCFF171MOL https://www.encodeproject.org/files/ENCFF171MOL/@@download/ENCFF171MOL.bam 28.6 M 0 27.6 M 0.965 SE 36 36 native 0.0 M 22.1 M 10.1 M 0.352 0.48 0.44 1.71 205 1.44 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c417f05-e7d5-42f9-bb42-80c0657e38f1/@@download/cross_correlation_plot/ENCFF623IJZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB033YIR bradley-bernstein:DNA_Lib 3760 ENCFF623IJZ HiSeq 2000 2016-11-15T17:12:58.335879+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b4Vz003692Jv5Yk8GgbFfb ENCSR661KMA https://www.encodeproject.org/experiments/ENCSR661KMA "histone,histone modification,narrow histone mark" H3K27ac-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF340TPS https://www.encodeproject.org/files/ENCFF340TPS/@@download/ENCFF340TPS.bam ENCFF087TXL https://www.encodeproject.org/files/ENCFF087TXL/@@download/ENCFF087TXL.bam 40.8 M 0 38.7 M 0.947 SE 76 36 36 0.0 M 30.6 M 28.1 M 0.689 0.92 0.93 16.18 215 1.29 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/4da29e7a-7b29-4a28-8d30-07702b72b37e/@@download/cross_correlation_plot/ENCFF082JPN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB519USV bradley-bernstein:DNA_Lib 6272 ENCFF082JPN HiSeq 2500 2016-11-15T17:14:46.204283+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b4XG80369BZ4kqbvjGpzfB ENCSR810BDB https://www.encodeproject.org/experiments/ENCSR810BDB "histone,histone modification,broad histone mark" H3K27me3-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF293SFY https://www.encodeproject.org/files/ENCFF293SFY/@@download/ENCFF293SFY.bam ENCFF493MVT https://www.encodeproject.org/files/ENCFF493MVT/@@download/ENCFF493MVT.bam 34.3 M 0 33.2 M 0.967 SE 36 36 36 0.0 M 25.7 M 23.8 M 0.695 0.93 0.93 14.40 215 1.02 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ec55f41-8981-476e-af0d-6051311ae3be/@@download/cross_correlation_plot/ENCFF851YMW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB700WXT bradley-bernstein:DNA_Lib 3758 ENCFF851YMW HiSeq 2000 2016-12-14T23:06:15.025655+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292gK80369BvG3VJ5qF220Q ENCSR810BDB https://www.encodeproject.org/experiments/ENCSR810BDB "histone,histone modification,broad histone mark" H3K27me3-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF933YRM https://www.encodeproject.org/files/ENCFF933YRM/@@download/ENCFF933YRM.bam ENCFF818YBG https://www.encodeproject.org/files/ENCFF818YBG/@@download/ENCFF818YBG.bam 26.9 M 0 25.6 M 0.951 SE 76 36 36 0.0 M 19.8 M 18.1 M 0.671 0.91 0.91 11.40 205 1.02 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/1494eb03-a375-435d-8656-d6b1ada47895/@@download/cross_correlation_plot/ENCFF281SBT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB969JXW bradley-bernstein:DNA_Lib 6276 ENCFF281SBT HiSeq 2500 2016-12-14T23:05:55.418962+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292gvQ03695y6gFJ6jy81FQ ENCSR091QXP https://www.encodeproject.org/experiments/ENCSR091QXP "histone,histone modification,broad histone mark" H3K36me3-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF910ULI https://www.encodeproject.org/files/ENCFF910ULI/@@download/ENCFF910ULI.bam ENCFF371JBF https://www.encodeproject.org/files/ENCFF371JBF/@@download/ENCFF371JBF.bam 26.9 M 0 26.2 M 0.974 SE 36 36 native 0.0 M 19.5 M 18.9 M 0.705 0.97 0.97 35.60 215 1.02 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/208b3d78-b8b9-4c8b-8407-1eb395d73b8c/@@download/cross_correlation_plot/ENCFF934HVY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB901TMI bradley-bernstein:DNA_Lib 3765 ENCFF934HVY HiSeq 2000 2016-11-25T03:05:13.800114+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQkpQ03699j2bFb9QjY1jJ ENCSR091QXP https://www.encodeproject.org/experiments/ENCSR091QXP "histone,histone modification,broad histone mark" H3K36me3-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF773PJD https://www.encodeproject.org/files/ENCFF773PJD/@@download/ENCFF773PJD.bam ENCFF229JJZ https://www.encodeproject.org/files/ENCFF229JJZ/@@download/ENCFF229JJZ.bam 28.9 M 0 27.4 M 0.948 SE 76 36 36 0.0 M 20.5 M 19.9 M 0.687 0.97 0.97 34.38 200 1.01 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/05d21e57-1188-4ffb-8256-e5356e4fe317/@@download/cross_correlation_plot/ENCFF850EAH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB571FUG bradley-bernstein:DNA_Lib 6275 ENCFF850EAH HiSeq 2500 2016-11-25T07:46:18.512710+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qpYZ803696bpJ9xxQvVY0Y ENCSR161MXP https://www.encodeproject.org/experiments/ENCSR161MXP "histone,histone modification,broad histone mark" H3K4me1-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF798DCS https://www.encodeproject.org/files/ENCFF798DCS/@@download/ENCFF798DCS.bam ENCFF010QPU https://www.encodeproject.org/files/ENCFF010QPU/@@download/ENCFF010QPU.bam 89.4 M 0 82.5 M 0.923 SE "76,36" 36 36 0.0 M 65.1 M 60.1 M 0.672 0.92 0.93 13.82 195 1.12 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/2df62ff7-31a8-4bf2-92b9-9ad6a0ebfdc4/@@download/cross_correlation_plot/ENCFF126DXV-ENCFF564VKX-ENCFF973AFN_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB010GQD bradley-bernstein:DNA_Lib 3753 "ENCFF126DXV,ENCFF564VKX,ENCFF973AFN" "HiSeq 2000,HiSeq 2500" 2017-01-13T20:29:04.684100+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vPqY00369J2FB34xVKj2Q9 ENCSR161MXP https://www.encodeproject.org/experiments/ENCSR161MXP "histone,histone modification,broad histone mark" H3K4me1-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF386MHB https://www.encodeproject.org/files/ENCFF386MHB/@@download/ENCFF386MHB.bam ENCFF065WXP https://www.encodeproject.org/files/ENCFF065WXP/@@download/ENCFF065WXP.bam 51.8 M 0 49.9 M 0.964 SE 76 36 36 0.0 M 39.3 M 28.5 M 0.550 0.73 0.78 6.27 195 1.06 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/03cee25c-a5d2-4374-b32d-fdf79518345e/@@download/cross_correlation_plot/ENCFF088BWP-ENCFF924HDE_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB523TSS,ENCLB029TSZ" "bradley-bernstein:DNA_Lib 5632,bradley-bernstein:DNA_Lib 6201" "ENCFF088BWP,ENCFF924HDE" HiSeq 2500 2017-01-13T19:46:32.685703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vPqkj0369Gbf610XY85G3G ENCSR794ULT https://www.encodeproject.org/experiments/ENCSR794ULT "histone,histone modification,narrow histone mark" H3K4me2-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF163XOG https://www.encodeproject.org/files/ENCFF163XOG/@@download/ENCFF163XOG.bam ENCFF688PFA https://www.encodeproject.org/files/ENCFF688PFA/@@download/ENCFF688PFA.bam 32.6 M 0 31.5 M 0.967 SE 36 36 36 0.0 M 26.0 M 24.2 M 0.742 0.93 0.94 16.35 215 1.49 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/261f4b3f-704b-4baf-91fa-4029721b2b17/@@download/cross_correlation_plot/ENCFF943AHJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB146FGR bradley-bernstein:DNA_Lib 3754 ENCFF943AHJ HiSeq 2000 2017-01-13T15:52:54.154329+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vJf0j0369Gbf610XY85Fgy ENCSR794ULT https://www.encodeproject.org/experiments/ENCSR794ULT "histone,histone modification,narrow histone mark" H3K4me2-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF726OCL https://www.encodeproject.org/files/ENCFF726OCL/@@download/ENCFF726OCL.bam ENCFF359XNF https://www.encodeproject.org/files/ENCFF359XNF/@@download/ENCFF359XNF.bam 56.1 M 0 52.9 M 0.944 SE 76 36 36 0.0 M 42.4 M 39.0 M 0.695 0.92 0.93 14.70 205 1.28 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/702c2291-bf6a-4ea6-ad5b-a90a65d0c622/@@download/cross_correlation_plot/ENCFF936MMN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB699OHH bradley-bernstein:DNA_Lib 6273 ENCFF936MMN HiSeq 2500 2017-01-13T17:07:32.901777+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vJf6Q03695g8KF0X09Y3Gv ENCSR333OPW https://www.encodeproject.org/experiments/ENCSR333OPW "histone,histone modification,narrow histone mark" H3K4me3-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF016IET https://www.encodeproject.org/files/ENCFF016IET/@@download/ENCFF016IET.bam ENCFF702LCC https://www.encodeproject.org/files/ENCFF702LCC/@@download/ENCFF702LCC.bam 38.2 M 0 37.0 M 0.969 SE 36 36 native 0.0 M 29.4 M 26.9 M 0.705 0.92 0.93 15.54 225 1.64 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/1df1d409-b74b-4bf1-99ff-2d765c7017ab/@@download/cross_correlation_plot/ENCFF960ZXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB048WZL bradley-bernstein:DNA_Lib 3761 ENCFF960ZXH HiSeq 2000 2016-11-15T17:16:49.666596+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b4Xkj03698jxyvkJ65YYJj ENCSR333OPW https://www.encodeproject.org/experiments/ENCSR333OPW "histone,histone modification,narrow histone mark" H3K4me3-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF673EXR https://www.encodeproject.org/files/ENCFF673EXR/@@download/ENCFF673EXR.bam ENCFF791EYX https://www.encodeproject.org/files/ENCFF791EYX/@@download/ENCFF791EYX.bam 29.4 M 0 27.9 M 0.950 SE 76 36 36 0.0 M 22.1 M 20.2 M 0.686 0.92 0.92 13.40 215 1.44 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/23d1ce84-6296-4831-ab04-1653634ccf7b/@@download/cross_correlation_plot/ENCFF183OZI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB194NKG bradley-bernstein:DNA_Lib 6274 ENCFF183OZI HiSeq 2500 2016-11-15T17:15:43.951547+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b4Y1j0369JKzYX9Gzz3kJB ENCSR494CCN https://www.encodeproject.org/experiments/ENCSR494CCN "histone,histone modification,broad histone mark" H3K79me2-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF719HUZ https://www.encodeproject.org/files/ENCFF719HUZ/@@download/ENCFF719HUZ.bam ENCFF078TBW https://www.encodeproject.org/files/ENCFF078TBW/@@download/ENCFF078TBW.bam 32.5 M 0 31.6 M 0.970 SE 36 36 36 0.0 M 24.5 M 22.7 M 0.697 0.93 0.93 14.22 210 1.06 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/06b2f999-bd2e-4c2a-aad2-36f19107088e/@@download/cross_correlation_plot/ENCFF517MPZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB197PCN bradley-bernstein:DNA_Lib 3757 ENCFF517MPZ HiSeq 2000 2016-11-25T20:37:37.539963+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyg4j0369KQ15V00X1q8pj ENCSR494CCN https://www.encodeproject.org/experiments/ENCSR494CCN "histone,histone modification,broad histone mark" H3K79me2-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF303DKJ https://www.encodeproject.org/files/ENCFF303DKJ/@@download/ENCFF303DKJ.bam ENCFF595QWS https://www.encodeproject.org/files/ENCFF595QWS/@@download/ENCFF595QWS.bam 39.1 M 0 38.0 M 0.971 SE 76 36 36 0.0 M 30.1 M 20.3 M 0.519 0.68 0.68 3.03 170 1.06 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/39ca561a-625f-41f6-a054-6222a1cf898c/@@download/cross_correlation_plot/ENCFF865KPW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB806DGY bradley-bernstein:DNA_Lib 6197 ENCFF865KPW HiSeq 2500 2016-11-25T07:46:27.332665+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qpZ28036970Gy1vVJYXgxk ENCSR093SHE https://www.encodeproject.org/experiments/ENCSR093SHE "histone,histone modification,narrow histone mark" H3K9ac-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF013MBA https://www.encodeproject.org/files/ENCFF013MBA/@@download/ENCFF013MBA.bam ENCFF670HYV https://www.encodeproject.org/files/ENCFF670HYV/@@download/ENCFF670HYV.bam 35.4 M 0 33.6 M 0.951 SE 36 36 native 0.0 M 27.3 M 24.4 M 0.691 0.90 0.91 11.47 215 1.48 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf3bc814-0ae0-4597-9774-f7d2875df978/@@download/cross_correlation_plot/ENCFF398KLJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB740TOC bradley-bernstein:DNA_Lib 3755 ENCFF398KLJ HiSeq 2000 2016-11-25T03:04:45.781695+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qV87Q03692FXJff1QzKq6k ENCSR093SHE https://www.encodeproject.org/experiments/ENCSR093SHE "histone,histone modification,narrow histone mark" H3K9ac-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF760UWO https://www.encodeproject.org/files/ENCFF760UWO/@@download/ENCFF760UWO.bam ENCFF331WTO https://www.encodeproject.org/files/ENCFF331WTO/@@download/ENCFF331WTO.bam 31.8 M 0 31.4 M 0.987 SE 76 36 36 0.0 M 25.3 M 24.2 M 0.760 0.96 0.96 24.21 230 1.20 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/420c613d-8708-4ca3-8a4e-df34d514ac77/@@download/cross_correlation_plot/ENCFF408RRT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB744LEJ bradley-bernstein:DNA_Lib 7099 ENCFF408RRT HiSeq 2500 2016-11-25T20:37:17.960868+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qygB803695JqYP6xFZzQBY ENCSR555LYM https://www.encodeproject.org/experiments/ENCSR555LYM "histone,histone modification,broad histone mark" H3K9me2-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF247HIH https://www.encodeproject.org/files/ENCFF247HIH/@@download/ENCFF247HIH.bam ENCFF025NNP https://www.encodeproject.org/files/ENCFF025NNP/@@download/ENCFF025NNP.bam 53.8 M 0 52.7 M 0.979 SE 76 36 36 0.0 M 42.3 M 32.8 M 0.609 0.78 0.77 4.42 180 1.01 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/d56b9be1-0d9b-407f-a441-5c104c754b5b/@@download/cross_correlation_plot/ENCFF190MTF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB441XMX bradley-bernstein:DNA_Lib 5483 ENCFF190MTF HiSeq 2500 2016-11-25T20:37:14.512725+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyggQ036943B6X5x3Fx447 ENCSR555LYM https://www.encodeproject.org/experiments/ENCSR555LYM "histone,histone modification,broad histone mark" H3K9me2-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF949AIT https://www.encodeproject.org/files/ENCFF949AIT/@@download/ENCFF949AIT.bam ENCFF362EKS https://www.encodeproject.org/files/ENCFF362EKS/@@download/ENCFF362EKS.bam 42.8 M 0 41.9 M 0.977 SE 76 36 36 0.0 M 32.2 M 30.8 M 0.720 0.96 0.96 22.98 170 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/f57dce9e-03ff-4923-97f9-54029c50c251/@@download/cross_correlation_plot/ENCFF760OZN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB314GOD bradley-bernstein:DNA_Lib 6696 ENCFF760OZN HiSeq 2500 2017-01-13T16:34:05.113459+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vJvF00369KjX9GK4zPjBpj ENCSR179BUC https://www.encodeproject.org/experiments/ENCSR179BUC "histone,histone modification,broad histone mark" H3K9me3-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF534ULC https://www.encodeproject.org/files/ENCFF534ULC/@@download/ENCFF534ULC.bam ENCFF428TXP https://www.encodeproject.org/files/ENCFF428TXP/@@download/ENCFF428TXP.bam 65.3 M 0 62.7 M 0.960 SE "76,36" 36 36 0.0 M 41.7 M 40.3 M 0.617 0.97 0.97 31.17 210 1.02 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/24c9266e-fb14-4535-b366-cbfd79ae640b/@@download/cross_correlation_plot/ENCFF453UML-ENCFF029JYY-ENCFF566XFA_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB113ZNN bradley-bernstein:DNA_Lib 3759 "ENCFF029JYY,ENCFF566XFA,ENCFF453UML" "HiSeq 2000,HiSeq 2500" 2017-01-13T19:25:56.884316+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vPjgQ036910P2vKf3Qb3pG ENCSR179BUC https://www.encodeproject.org/experiments/ENCSR179BUC "histone,histone modification,broad histone mark" H3K9me3-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF141VHH https://www.encodeproject.org/files/ENCFF141VHH/@@download/ENCFF141VHH.bam ENCFF040ANC https://www.encodeproject.org/files/ENCFF040ANC/@@download/ENCFF040ANC.bam 31.1 M 0 30.0 M 0.966 SE 76 36 36 0.0 M 22.3 M 13.1 M 0.422 0.60 0.59 2.35 175 1.03 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2f9aa75-4f21-4566-8a28-92f4959b5e50/@@download/cross_correlation_plot/ENCFF578MDZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB245ENB bradley-bernstein:DNA_Lib 6204 ENCFF578MDZ HiSeq 2500 2017-01-13T19:47:11.078232+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vPjxj0369Gbf610XY85G2P ENCSR474DOV https://www.encodeproject.org/experiments/ENCSR474DOV "histone,histone modification,broad histone mark" H4K20me1-human HCT116 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF874XAQ https://www.encodeproject.org/files/ENCFF874XAQ/@@download/ENCFF874XAQ.bam ENCFF045EAI https://www.encodeproject.org/files/ENCFF045EAI/@@download/ENCFF045EAI.bam 41.3 M 0 40.5 M 0.980 SE 76 36 36 0.0 M 32.1 M 30.8 M 0.746 0.96 0.96 25.87 215 1.01 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d9a859b-fb26-4ded-b740-890b0f286134/@@download/cross_correlation_plot/ENCFF478VDD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB553DGW bradley-bernstein:DNA_Lib 5476 ENCFF478VDD HiSeq 2500 2017-01-13T16:10:32.511864+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vJbJj03690z6ypJZQYf0Z8 ENCSR474DOV https://www.encodeproject.org/experiments/ENCSR474DOV "histone,histone modification,broad histone mark" H4K20me1-human HCT116 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF675HRV https://www.encodeproject.org/files/ENCFF675HRV/@@download/ENCFF675HRV.bam ENCFF412HFF https://www.encodeproject.org/files/ENCFF412HFF/@@download/ENCFF412HFF.bam 20.2 M 0 16.4 M 0.814 SE 76 36 36 0.0 M 12.3 M 9.5 M 0.471 0.78 0.78 4.56 195 1.04 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb8a5633-44c1-4e74-ba08-ef03b890ea11/@@download/cross_correlation_plot/ENCFF070JDY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB246LQL bradley-bernstein:DNA_Lib 6200 ENCFF070JDY HiSeq 2500 2017-01-13T15:31:29.197502+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vJbZ00369Gbf610XY85FgX ENCSR526EXI https://www.encodeproject.org/experiments/ENCSR526EXI control Control-human heart left ventricle tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF639VKM https://www.encodeproject.org/files/ENCFF639VKM/@@download/ENCFF639VKM.bam ENCFF520BVL https://www.encodeproject.org/files/ENCFF520BVL/@@download/ENCFF520BVL.bam 148.5 M 0 141.9 M 0.956 SE 76 76 native 0.0 M 125.6 M 121.7 M 0.820 0.97 0.97 35.74 465 1.00 0.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb610f00-042e-4890-92a5-2a7cee98c195/@@download/cross_correlation_plot/ENCFF993UPA-ENCFF980IWS-ENCFF228LJG-ENCFF307LWZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB774HVW,ENCLB087VEM" "bradley-bernstein:DNA_Lib 8226,bradley-bernstein:DNA_Lib 7946" "ENCFF980IWS,ENCFF228LJG,ENCFF993UPA,ENCFF307LWZ" HiSeq 2500 2016-10-28T04:51:14.510806+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091V8003692g2Q4k5K0jq5X ENCSR854OXF https://www.encodeproject.org/experiments/ENCSR854OXF "histone,histone modification,narrow histone mark" H3K27ac-human heart left ventricle tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF065GIK https://www.encodeproject.org/files/ENCFF065GIK/@@download/ENCFF065GIK.bam ENCFF635EBJ https://www.encodeproject.org/files/ENCFF635EBJ/@@download/ENCFF635EBJ.bam 31.8 M 0 30.5 M 0.960 SE 76 76 native 0.0 M 28.5 M 26.6 M 0.834 0.93 0.94 15.98 230 1.22 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/828b4907-5d56-4fc3-88a0-a092c583ba1f/@@download/cross_correlation_plot/ENCFF978HHN-ENCFF762NSE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB818WJB bradley-bernstein:DNA_Lib 8065 "ENCFF978HHN,ENCFF762NSE" HiSeq 2500 2016-10-31T13:24:56.549744+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8ZxQ0369JYX7855VG0Z04 ENCSR988JLN https://www.encodeproject.org/experiments/ENCSR988JLN "histone,histone modification,broad histone mark" H3K27me3-human heart left ventricle tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF404YFJ https://www.encodeproject.org/files/ENCFF404YFJ/@@download/ENCFF404YFJ.bam ENCFF793FPD https://www.encodeproject.org/files/ENCFF793FPD/@@download/ENCFF793FPD.bam 62.7 M 0 61.1 M 0.974 SE 76 76 native 0.0 M 53.6 M 49.3 M 0.786 0.94 0.94 15.55 225 1.00 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/8793622e-2488-4e9a-8ba1-644bd1c81f03/@@download/cross_correlation_plot/ENCFF350JUT-ENCFF285FHY-ENCFF338SUU-ENCFF215PPA-ENCFF635NDK-ENCFF434IBK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB736KOR bradley-bernstein:DNA_Lib 8250 "ENCFF338SUU,ENCFF635NDK,ENCFF285FHY,ENCFF350JUT,ENCFF215PPA,ENCFF434IBK" HiSeq 2500 2017-01-26T20:59:21.936590+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24k1g003690448p9JQzZzQx ENCSR500ZGF https://www.encodeproject.org/experiments/ENCSR500ZGF "histone,histone modification,broad histone mark" H3K36me3-human heart left ventricle tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF177VMX https://www.encodeproject.org/files/ENCFF177VMX/@@download/ENCFF177VMX.bam ENCFF243UCA https://www.encodeproject.org/files/ENCFF243UCA/@@download/ENCFF243UCA.bam 74.5 M 0 71.6 M 0.961 SE 76 76 native 0.0 M 63.7 M 61.6 M 0.827 0.97 0.97 33.94 285 1.00 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/bfd35ba3-58b7-4827-a96f-e54fb3712cf1/@@download/cross_correlation_plot/ENCFF576BDG-ENCFF678ZKR-ENCFF354RCL-ENCFF182NIM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB574PHY bradley-bernstein:DNA_Lib 8077 "ENCFF354RCL,ENCFF678ZKR,ENCFF182NIM,ENCFF576BDG" HiSeq 2500 2016-10-31T13:24:55.007551+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8qq80369P876f29P7Qb32 ENCSR500ZGF https://www.encodeproject.org/experiments/ENCSR500ZGF "histone,histone modification,broad histone mark" H3K36me3-human heart left ventricle tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF271WMR https://www.encodeproject.org/files/ENCFF271WMR/@@download/ENCFF271WMR.bam ENCFF196DHO https://www.encodeproject.org/files/ENCFF196DHO/@@download/ENCFF196DHO.bam 38.1 M 0 37.3 M 0.979 SE 76 76 native 0.0 M 33.1 M 31.9 M 0.837 0.97 0.97 34.47 280 1.01 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9e8a693-d142-4b87-85a8-8fcaf24ac1a5/@@download/cross_correlation_plot/ENCFF341TOM-ENCFF791SNT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB738MIE bradley-bernstein:DNA_Lib 8251 "ENCFF791SNT,ENCFF341TOM" HiSeq 2500 2016-10-31T13:19:57.116722+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8qz80369668063VP6bvYf ENCSR438QZN https://www.encodeproject.org/experiments/ENCSR438QZN "histone,histone modification,broad histone mark" H3K4me1-human heart left ventricle tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF658QKI https://www.encodeproject.org/files/ENCFF658QKI/@@download/ENCFF658QKI.bam ENCFF036XRS https://www.encodeproject.org/files/ENCFF036XRS/@@download/ENCFF036XRS.bam 78.2 M 0 75.7 M 0.968 SE 76 76 native 0.0 M 67.6 M 61.2 M 0.783 0.92 0.92 12.95 240 1.01 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d50b520-91b3-453f-8f5d-a78caa410647/@@download/cross_correlation_plot/ENCFF913XUB-ENCFF044XZF-ENCFF546XVH-ENCFF108NZU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB373PQY bradley-bernstein:DNA_Lib 8249 "ENCFF913XUB,ENCFF108NZU,ENCFF546XVH,ENCFF044XZF" HiSeq 2500 2016-10-31T13:27:05.566947+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8bBj0369Bj2bF0JP9K9kQ ENCSR901SIL https://www.encodeproject.org/experiments/ENCSR901SIL "histone,histone modification,narrow histone mark" H3K4me3-human heart left ventricle tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF522PEL https://www.encodeproject.org/files/ENCFF522PEL/@@download/ENCFF522PEL.bam ENCFF841AUD https://www.encodeproject.org/files/ENCFF841AUD/@@download/ENCFF841AUD.bam 136.0 M 0 128.4 M 0.944 SE 76 76 native 0.0 M 115.4 M 97.9 M 0.719 0.86 0.88 9.95 175 1.19 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/844ff0b3-f0a6-4b38-be48-06a747707bc1/@@download/cross_correlation_plot/ENCFF276ILJ-ENCFF198IPO-ENCFF114DEX-ENCFF004IQU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB132WBF bradley-bernstein:DNA_Lib 8312 "ENCFF276ILJ,ENCFF004IQU,ENCFF198IPO,ENCFF114DEX" HiSeq 2500 2017-01-25T09:59:47.601198+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2413fj03699XXPP8kkVGv1y ENCSR000XAA https://www.encodeproject.org/experiments/ENCSR000XAA "histone,histone modification,broad histone mark" H3K9me3-human heart left ventricle tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF937ZBG https://www.encodeproject.org/files/ENCFF937ZBG/@@download/ENCFF937ZBG.bam ENCFF273GZA https://www.encodeproject.org/files/ENCFF273GZA/@@download/ENCFF273GZA.bam 64.3 M 0 61.4 M 0.955 SE 76 76 native 0.0 M 48.5 M 45.1 M 0.702 0.94 0.95 18.79 230 1.01 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/d65d177f-8048-493c-86a1-04f8916d0beb/@@download/cross_correlation_plot/ENCFF827ZMG-ENCFF468MZD-ENCFF255DKC-ENCFF777XFQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB522ZXV bradley-bernstein:DNA_Lib 8252 "ENCFF468MZD,ENCFF255DKC,ENCFF827ZMG,ENCFF777XFQ" HiSeq 2500 2017-01-26T21:02:03.566236+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24jfVj03693Jf2v97QJ7gf9 ENCSR000AOB https://www.encodeproject.org/experiments/ENCSR000AOB control Control-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF432JPE https://www.encodeproject.org/files/ENCFF432JPE/@@download/ENCFF432JPE.bam ENCFF713YQB https://www.encodeproject.org/files/ENCFF713YQB/@@download/ENCFF713YQB.bam 84.6 M 0 75.9 M 0.898 SE 36 36 native 0.0 M 57.3 M 49.0 M 0.580 0.87 0.89 10.48 155 1.02 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2b55703-6b98-457a-887b-f1bdb6e7743f/@@download/cross_correlation_plot/ENCFF000BAU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHL ENCFF000BAU Illumina Genome Analyzer IIx 2016-08-09T16:01:33.071965+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYF480369K6bQZG82k0kBg ENCSR000AOB https://www.encodeproject.org/experiments/ENCSR000AOB control Control-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF818YAG https://www.encodeproject.org/files/ENCFF818YAG/@@download/ENCFF818YAG.bam ENCFF954DWW https://www.encodeproject.org/files/ENCFF954DWW/@@download/ENCFF954DWW.bam 44.1 M 0 39.5 M 0.895 SE 36 36 native 0.0 M 29.1 M 24.6 M 0.557 0.86 0.86 7.47 140 1.03 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/edd22942-bfe1-4de7-8817-715ced6f7523/@@download/cross_correlation_plot/ENCFF000BAO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHK ENCFF000BAO Illumina Genome Analyzer IIx 2016-08-09T15:59:15.555213+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYF6Q03696BF6v1Q3BGK5z ENCSR000AOA https://www.encodeproject.org/experiments/ENCSR000AOA "transcription factor,RNA binding protein" CTCF-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF610QSE https://www.encodeproject.org/files/ENCFF610QSE/@@download/ENCFF610QSE.bam ENCFF211TQG https://www.encodeproject.org/files/ENCFF211TQG/@@download/ENCFF211TQG.bam 30.3 M 0 23.5 M 0.776 SE 36 36 native 0.0 M 16.4 M 12.4 M 0.410 0.79 0.80 5.05 210 1.52 3.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b189cd4-c897-423c-9179-8f0daa96a1cc/@@download/cross_correlation_plot/ENCFF000BAS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHY ENCFF000BAS Illumina Genome Analyzer IIx 2016-12-11T05:00:59.571178+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Jz003697yz601ypVJ3x8 ENCSR000AOA https://www.encodeproject.org/experiments/ENCSR000AOA "transcription factor,RNA binding protein" CTCF-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF144LJX https://www.encodeproject.org/files/ENCFF144LJX/@@download/ENCFF144LJX.bam ENCFF046FAF https://www.encodeproject.org/files/ENCFF046FAF/@@download/ENCFF046FAF.bam 29.7 M 0 23.8 M 0.802 SE 36 36 native 0.0 M 17.5 M 15.9 M 0.536 0.92 0.93 14.92 200 1.91 3.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cc7cd9f-6d5d-448c-a985-07ecbeceff49/@@download/cross_correlation_plot/ENCFF000BAT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQO ENCFF000BAT Illumina Genome Analyzer IIx 2016-12-11T05:04:52.541836+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166K4Q0369PvYp91zK1Pxpf ENCSR000ATC https://www.encodeproject.org/experiments/ENCSR000ATC "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF307JSM https://www.encodeproject.org/files/ENCFF307JSM/@@download/ENCFF307JSM.bam ENCFF518HTA https://www.encodeproject.org/files/ENCFF518HTA/@@download/ENCFF518HTA.bam 47.0 M 0 44.1 M 0.938 SE 36 36 native 0.0 M 33.3 M 29.2 M 0.621 0.89 0.89 8.84 220 1.02 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/afb10086-4c8e-466c-928e-b0dd81f99e7a/@@download/cross_correlation_plot/ENCFF000BBE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWN bradley-bernstein:DNA_Lib 222 ENCFF000BBE HiSeq 2000 2016-12-11T04:08:46.797034+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164zQj0369KbxV61z4GFvQQ ENCSR000ATC https://www.encodeproject.org/experiments/ENCSR000ATC "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF846NVE https://www.encodeproject.org/files/ENCFF846NVE/@@download/ENCFF846NVE.bam ENCFF005PUA https://www.encodeproject.org/files/ENCFF005PUA/@@download/ENCFF005PUA.bam 32.1 M 0 30.9 M 0.964 SE 36 36 native 0.0 M 23.0 M 20.5 M 0.638 0.90 0.90 10.26 385 1.02 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b8ee314-1768-4daf-aebc-a696a9a4d131/@@download/cross_correlation_plot/ENCFF000BBD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWM bradley-bernstein:DNA_Lib 221 ENCFF000BBD HiSeq 2000 2016-12-11T04:02:51.718418+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164zb803697yz601ypVJ3V2 ENCSR000AQN https://www.encodeproject.org/experiments/ENCSR000AQN "histone,histone modification,narrow histone mark" H2AFZ-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF218TEJ https://www.encodeproject.org/files/ENCFF218TEJ/@@download/ENCFF218TEJ.bam ENCFF644WBQ https://www.encodeproject.org/files/ENCFF644WBQ/@@download/ENCFF644WBQ.bam 43.3 M 0 41.8 M 0.964 SE 36 36 36 0.0 M 32.0 M 31.1 M 0.719 0.98 0.98 42.04 170 1.05 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/670c5805-2a8d-467d-8c56-9e820543c38e/@@download/cross_correlation_plot/ENCFF000BBJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATP ENCFF000BBJ Illumina Genome Analyzer 2016-11-05T17:36:50.430075+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkP5003697vzB1y0B63VJY ENCSR000AQN https://www.encodeproject.org/experiments/ENCSR000AQN "histone,histone modification,narrow histone mark" H2AFZ-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF351YXC https://www.encodeproject.org/files/ENCFF351YXC/@@download/ENCFF351YXC.bam ENCFF367VOP https://www.encodeproject.org/files/ENCFF367VOP/@@download/ENCFF367VOP.bam 36.7 M 0 35.8 M 0.976 SE 36 36 36 0.0 M 27.3 M 26.7 M 0.728 0.98 0.98 59.35 135 1.06 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/8dca6104-2bff-42a5-addd-f100995533c5/@@download/cross_correlation_plot/ENCFF000BBK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATO ENCFF000BBK Illumina Genome Analyzer 2016-11-05T17:38:32.758580+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkP9803696Zj590J8YzYp2 ENCSR000AOC https://www.encodeproject.org/experiments/ENCSR000AOC "histone,histone modification,narrow histone mark" H3K27ac-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF113QJM https://www.encodeproject.org/files/ENCFF113QJM/@@download/ENCFF113QJM.bam ENCFF566BQX https://www.encodeproject.org/files/ENCFF566BQX/@@download/ENCFF566BQX.bam 25.1 M 0 21.2 M 0.844 SE 36 36 native 0.0 M 16.2 M 14.8 M 0.591 0.93 0.93 15.85 235 1.78 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7218daf-515b-44ef-a27f-94b92437a150/@@download/cross_correlation_plot/ENCFF000BBY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUZ ENCFF000BBY Illumina Genome Analyzer IIx 2016-08-09T15:59:14.899569+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY91j03695yYyVq02XB5BV ENCSR000AOC https://www.encodeproject.org/experiments/ENCSR000AOC "histone,histone modification,narrow histone mark" H3K27ac-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF218BUW https://www.encodeproject.org/files/ENCFF218BUW/@@download/ENCFF218BUW.bam ENCFF225PEB https://www.encodeproject.org/files/ENCFF225PEB/@@download/ENCFF225PEB.bam 26.8 M 0 22.1 M 0.826 SE 36 36 native 0.0 M 17.3 M 15.7 M 0.586 0.93 0.93 16.32 195 1.79 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/80149876-dd54-4f12-9874-c0e7a1b91a95/@@download/cross_correlation_plot/ENCFF000BBZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUY ENCFF000BBZ Illumina Genome Analyzer IIx 2016-08-09T15:59:04.423127+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY9400369J0Bzfkv2Xyx9b ENCSR000APB https://www.encodeproject.org/experiments/ENCSR000APB "histone,histone modification,broad histone mark" H3K27me3-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF290GJJ https://www.encodeproject.org/files/ENCFF290GJJ/@@download/ENCFF290GJJ.bam ENCFF111LYA https://www.encodeproject.org/files/ENCFF111LYA/@@download/ENCFF111LYA.bam 39.6 M 0 36.5 M 0.923 SE 36 36 36 0.0 M 27.2 M 25.3 M 0.638 0.93 0.93 15.18 200 1.02 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ac1873d-2970-4510-8d6d-e34451de5f3d/@@download/cross_correlation_plot/ENCFF000BCE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACM ENCFF000BCE Illumina Genome Analyzer IIx 2016-11-05T17:37:32.393936+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkKgQ03696jy9Kv0B4Y6g7 ENCSR000APB https://www.encodeproject.org/experiments/ENCSR000APB "histone,histone modification,broad histone mark" H3K27me3-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF653IXT https://www.encodeproject.org/files/ENCFF653IXT/@@download/ENCFF653IXT.bam ENCFF971MFN https://www.encodeproject.org/files/ENCFF971MFN/@@download/ENCFF971MFN.bam 36.2 M 0 28.2 M 0.779 SE 36 36 36 0.0 M 20.6 M 19.8 M 0.546 0.97 0.97 32.74 175 1.02 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/21715cef-65a2-4479-9720-ed4cb07edbfa/@@download/cross_correlation_plot/ENCFF000BCI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACL ENCFF000BCI Illumina Genome Analyzer IIx 2016-11-05T17:36:32.714541+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkKy803693Yx5pkGB3y944 ENCSR000AOD https://www.encodeproject.org/experiments/ENCSR000AOD "histone,histone modification,broad histone mark" H3K36me3-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF156SYA https://www.encodeproject.org/files/ENCFF156SYA/@@download/ENCFF156SYA.bam ENCFF538PWO https://www.encodeproject.org/files/ENCFF538PWO/@@download/ENCFF538PWO.bam 36.9 M 0 33.4 M 0.905 SE 36 36 36 0.0 M 25.3 M 24.6 M 0.668 0.98 0.98 43.34 70 1.02 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/683cae0b-104f-44ff-b908-aed947678d44/@@download/cross_correlation_plot/ENCFF000BCK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHD ENCFF000BCK Illumina Genome Analyzer IIx 2016-11-05T17:37:02.158494+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkPVQ0369B9XVbg4B76BGK ENCSR000AOD https://www.encodeproject.org/experiments/ENCSR000AOD "histone,histone modification,broad histone mark" H3K36me3-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF237RQN https://www.encodeproject.org/files/ENCFF237RQN/@@download/ENCFF237RQN.bam ENCFF051ZJK https://www.encodeproject.org/files/ENCFF051ZJK/@@download/ENCFF051ZJK.bam 40.4 M 0 36.4 M 0.900 SE 36 36 36 0.0 M 27.4 M 26.7 M 0.660 0.98 0.98 44.57 0 1.01 0.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/23a40414-0f23-41c1-b017-f4f2c8f96212/@@download/cross_correlation_plot/ENCFF000BCL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALU ENCFF000BCL Illumina Genome Analyzer IIx 2016-11-05T17:36:39.318808+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkPgj0369PbJv8fGB41f74 ENCSR000APW https://www.encodeproject.org/experiments/ENCSR000APW "histone,histone modification,broad histone mark" H3K4me1-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF617YCQ https://www.encodeproject.org/files/ENCFF617YCQ/@@download/ENCFF617YCQ.bam ENCFF223SUG https://www.encodeproject.org/files/ENCFF223SUG/@@download/ENCFF223SUG.bam 25.1 M 0 20.2 M 0.805 SE 36 36 36 0.0 M 16.0 M 15.5 M 0.617 0.97 0.97 36.94 235 1.13 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/8db3f9a2-c1b3-407d-993e-6f26f373dbf0/@@download/cross_correlation_plot/ENCFF000BBP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHS ENCFF000BBP Illumina Genome Analyzer IIx 2016-11-05T17:37:08.829284+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkFPQ03693Yx5pkGB3y937 ENCSR000APW https://www.encodeproject.org/experiments/ENCSR000APW "histone,histone modification,broad histone mark" H3K4me1-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF235FMM https://www.encodeproject.org/files/ENCFF235FMM/@@download/ENCFF235FMM.bam ENCFF510HMZ https://www.encodeproject.org/files/ENCFF510HMZ/@@download/ENCFF510HMZ.bam 24.9 M 0 24.4 M 0.980 SE 36 36 36 0.0 M 19.5 M 18.8 M 0.755 0.96 0.97 28.75 185 1.10 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/52579c68-8726-4354-8ae3-e0c90eedde4f/@@download/cross_correlation_plot/ENCFF000BBQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHR ENCFF000BBQ Illumina Genome Analyzer IIx 2016-11-05T17:37:09.887065+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkFbj03696QVKGb5b18006 ENCSR000AOE https://www.encodeproject.org/experiments/ENCSR000AOE "histone,histone modification,narrow histone mark" H3K4me2-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF241VRU https://www.encodeproject.org/files/ENCFF241VRU/@@download/ENCFF241VRU.bam ENCFF730MIV https://www.encodeproject.org/files/ENCFF730MIV/@@download/ENCFF730MIV.bam 41.5 M 0 38.1 M 0.916 SE 36 36 36 0.0 M 29.5 M 28.4 M 0.683 0.97 0.97 30.09 215 1.18 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/75fccf53-976c-4b70-8bdd-36c0ae611c23/@@download/cross_correlation_plot/ENCFF000BCU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOG ENCFF000BCU Illumina Genome Analyzer IIx 2016-11-05T17:37:57.599210+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkF7003693Yx5pkGB3y92z ENCSR000AOE https://www.encodeproject.org/experiments/ENCSR000AOE "histone,histone modification,narrow histone mark" H3K4me2-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF999RCX https://www.encodeproject.org/files/ENCFF999RCX/@@download/ENCFF999RCX.bam ENCFF010LCV https://www.encodeproject.org/files/ENCFF010LCV/@@download/ENCFF010LCV.bam 31.4 M 0 20.8 M 0.662 SE 36 36 36 0.0 M 14.7 M 11.1 M 0.352 0.80 0.81 5.59 145 1.25 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/4299567d-3db5-4eae-851e-901c1f13167a/@@download/cross_correlation_plot/ENCFF000BCT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOF ENCFF000BCT Illumina Genome Analyzer IIx 2016-11-05T17:36:51.938897+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkFF003699P6PYx8BPxQYq ENCSR000AOF https://www.encodeproject.org/experiments/ENCSR000AOF "histone,histone modification,narrow histone mark" H3K4me3-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF063XTI https://www.encodeproject.org/files/ENCFF063XTI/@@download/ENCFF063XTI.bam ENCFF474OMH https://www.encodeproject.org/files/ENCFF474OMH/@@download/ENCFF474OMH.bam 26.2 M 0 22.2 M 0.849 SE 36 36 native 0.0 M 16.5 M 15.8 M 0.604 0.97 0.97 29.90 225 1.32 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecaa69ab-8f4e-482a-8c51-0d4cc1d06170/@@download/cross_correlation_plot/ENCFF000BDA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKU ENCFF000BDA Illumina Genome Analyzer IIx 2016-08-20T00:46:32.090735+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZP7j036946XvQb09Kgz4j ENCSR000AOF https://www.encodeproject.org/experiments/ENCSR000AOF "histone,histone modification,narrow histone mark" H3K4me3-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF418BEY https://www.encodeproject.org/files/ENCFF418BEY/@@download/ENCFF418BEY.bam ENCFF120UDA https://www.encodeproject.org/files/ENCFF120UDA/@@download/ENCFF120UDA.bam 23.3 M 0 17.6 M 0.754 SE 36 36 native 0.0 M 12.9 M 12.3 M 0.528 0.97 0.97 31.30 180 1.63 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/227890f6-33c2-411e-ba43-a6967cd0d3ea/@@download/cross_correlation_plot/ENCFF000BCZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKT ENCFF000BCZ Illumina Genome Analyzer IIx 2016-08-20T00:46:11.043791+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZPB80369JjVqXgZ9JkyY4 ENCSR340WQU https://www.encodeproject.org/experiments/ENCSR340WQU "histone,histone modification,narrow histone mark" H3K4me3-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF766QNY https://www.encodeproject.org/files/ENCFF766QNY/@@download/ENCFF766QNY.bam ENCFF600OGM https://www.encodeproject.org/files/ENCFF600OGM/@@download/ENCFF600OGM.bam 81.0 M 0 78.8 M 0.973 SE 36 36 native 0.0 M 60.9 M 57.2 M 0.706 0.95 0.96 23.99 230 1.13 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d07126f-aa45-46ca-8a68-cbd6a86862d1/@@download/cross_correlation_plot/ENCFF248WCN-ENCFF625VRT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB568OSM,ENCLB729HUC" "bradley-bernstein:DNA_Lib 4725,bradley-bernstein:DNA_Lib 4782" "ENCFF625VRT,ENCFF248WCN" "HiSeq 2000,HiSeq 2500" 2016-11-07T17:21:36.629900+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KV3880369P0J6bFv35k5Gx ENCSR340WQU https://www.encodeproject.org/experiments/ENCSR340WQU "histone,histone modification,narrow histone mark" H3K4me3-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF724BIL https://www.encodeproject.org/files/ENCFF724BIL/@@download/ENCFF724BIL.bam ENCFF399ACJ https://www.encodeproject.org/files/ENCFF399ACJ/@@download/ENCFF399ACJ.bam 42.3 M 0 40.9 M 0.966 SE 76 36 36 0.0 M 31.6 M 29.4 M 0.694 0.93 0.94 16.01 205 1.26 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc85c795-8c4b-4e9e-99e5-ee1afb8424ce/@@download/cross_correlation_plot/ENCFF588FTN-ENCFF485LYA-ENCFF751DMM_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB239IFU bradley-bernstein:DNA_Lib 6222 "ENCFF588FTN,ENCFF751DMM,ENCFF485LYA" HiSeq 2500 2016-10-29T04:51:45.783002+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xF900369GJ6xQfbB7FX13 ENCSR000AOG https://www.encodeproject.org/experiments/ENCSR000AOG "histone,histone modification,broad histone mark" H3K79me2-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF475NDZ https://www.encodeproject.org/files/ENCFF475NDZ/@@download/ENCFF475NDZ.bam ENCFF772QPI https://www.encodeproject.org/files/ENCFF772QPI/@@download/ENCFF772QPI.bam 33.7 M 0 22.4 M 0.664 SE 36 36 36 0.0 M 15.6 M 11.1 M 0.329 0.76 0.78 4.72 145 1.15 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b101636-2d2c-4a91-87ab-a7bd136fb81e/@@download/cross_correlation_plot/ENCFF000BDG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATY ENCFF000BDG Illumina Genome Analyzer IIx 2016-11-05T17:34:38.272746+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkYpj03699P6PYx8BPxQk6 ENCSR000AOG https://www.encodeproject.org/experiments/ENCSR000AOG "histone,histone modification,broad histone mark" H3K79me2-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF996LZO https://www.encodeproject.org/files/ENCFF996LZO/@@download/ENCFF996LZO.bam ENCFF652BKH https://www.encodeproject.org/files/ENCFF652BKH/@@download/ENCFF652BKH.bam 29.0 M 0 18.9 M 0.652 SE 36 36 36 0.0 M 12.7 M 8.9 M 0.306 0.76 0.78 4.78 145 1.15 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/e34bd6bb-429c-45eb-864f-cc99d992642b/@@download/cross_correlation_plot/ENCFF000BDF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATZ ENCFF000BDF Illumina Genome Analyzer IIx 2016-11-05T17:35:31.583263+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkZ0j0369B9XVbg4B76BQK ENCSR000AOH https://www.encodeproject.org/experiments/ENCSR000AOH "histone,histone modification,narrow histone mark" H3K9ac-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF725TAB https://www.encodeproject.org/files/ENCFF725TAB/@@download/ENCFF725TAB.bam ENCFF652HCH https://www.encodeproject.org/files/ENCFF652HCH/@@download/ENCFF652HCH.bam 30.4 M 0 23.5 M 0.774 SE 36 36 36 0.0 M 17.3 M 14.5 M 0.476 0.87 0.87 8.24 220 1.66 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/52a7b88f-c3ae-4db0-b417-1ad740047a8f/@@download/cross_correlation_plot/ENCFF000BDH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARJ ENCFF000BDH Illumina Genome Analyzer IIx 2016-11-05T17:37:48.894536+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkBq80369B9XVbg4B76BBV ENCSR000AOH https://www.encodeproject.org/experiments/ENCSR000AOH "histone,histone modification,narrow histone mark" H3K9ac-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF322BEP https://www.encodeproject.org/files/ENCFF322BEP/@@download/ENCFF322BEP.bam ENCFF367SLS https://www.encodeproject.org/files/ENCFF367SLS/@@download/ENCFF367SLS.bam 29.2 M 0 23.7 M 0.814 SE 36 36 36 0.0 M 17.9 M 16.2 M 0.554 0.92 0.92 13.78 210 1.66 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/15ab28d6-9f11-44e0-9227-22e33fdeb192/@@download/cross_correlation_plot/ENCFF000BDN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APV ENCFF000BDN Illumina Genome Analyzer IIx 2016-11-05T17:38:30.438258+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkF18036911ffQk1b9pPbQ ENCSR000AQO https://www.encodeproject.org/experiments/ENCSR000AQO "histone,histone modification,broad histone mark" H3K9me3-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF409PGL https://www.encodeproject.org/files/ENCFF409PGL/@@download/ENCFF409PGL.bam ENCFF151CEI https://www.encodeproject.org/files/ENCFF151CEI/@@download/ENCFF151CEI.bam 43.8 M 0 42.7 M 0.975 SE 36 36 36 0.0 M 29.1 M 28.3 M 0.647 0.98 0.98 43.34 135 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/29e4b3b7-490f-497c-88d4-6d10a24a7826/@@download/cross_correlation_plot/ENCFF000BBW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATA ENCFF000BBW Illumina Genome Analyzer 2016-11-05T17:38:29.832290+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkBV803696Zj590J8YzYk8 ENCSR000AQO https://www.encodeproject.org/experiments/ENCSR000AQO "histone,histone modification,broad histone mark" H3K9me3-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF870GXD https://www.encodeproject.org/files/ENCFF870GXD/@@download/ENCFF870GXD.bam ENCFF581LTD https://www.encodeproject.org/files/ENCFF581LTD/@@download/ENCFF581LTD.bam 20.1 M 0 19.6 M 0.974 SE 36 36 36 0.0 M 12.8 M 8.0 M 0.399 0.66 0.68 3.29 160 1.08 3.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/75b49a31-5ff7-497b-9e0e-bd7038cb5f19/@@download/cross_correlation_plot/ENCFF000BBT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASZ ENCFF000BBT Illumina Genome Analyzer 2016-11-05T17:37:03.439469+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkBbj03696jy9Kv0B4Y6f1 ENCSR000AOI https://www.encodeproject.org/experiments/ENCSR000AOI "histone,histone modification,broad histone mark" H4K20me1-human HeLa-S3 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF919JPY https://www.encodeproject.org/files/ENCFF919JPY/@@download/ENCFF919JPY.bam ENCFF214YME https://www.encodeproject.org/files/ENCFF214YME/@@download/ENCFF214YME.bam 28.2 M 0 19.2 M 0.679 SE 36 36 36 0.0 M 12.8 M 6.7 M 0.236 0.61 0.64 3.03 165 1.13 5.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/8da437d2-2455-4bb9-a1db-ee8f18954b5b/@@download/cross_correlation_plot/ENCFF000BDM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADD ENCFF000BDM Illumina Genome Analyzer IIx 2016-11-05T17:36:12.426736+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkPvj036945FQkxk8GJPb6 ENCSR000AOI https://www.encodeproject.org/experiments/ENCSR000AOI "histone,histone modification,broad histone mark" H4K20me1-human HeLa-S3 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF943SZD https://www.encodeproject.org/files/ENCFF943SZD/@@download/ENCFF943SZD.bam ENCFF888NZP https://www.encodeproject.org/files/ENCFF888NZP/@@download/ENCFF888NZP.bam 24.9 M 0 17.6 M 0.706 SE 36 36 36 0.0 M 12.2 M 9.8 M 0.394 0.84 0.85 6.87 145 1.07 3.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3615c5c-caa7-435d-94f5-5ca8cbf65f56/@@download/cross_correlation_plot/ENCFF000BDR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADC ENCFF000BDR Illumina Genome Analyzer IIx 2016-11-05T17:35:58.621825+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkQ3003697vzB1y0B63VKZ ENCSR107PGG https://www.encodeproject.org/experiments/ENCSR107PGG control Control-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF248XON https://www.encodeproject.org/files/ENCFF248XON/@@download/ENCFF248XON.bam ENCFF245VQD https://www.encodeproject.org/files/ENCFF245VQD/@@download/ENCFF245VQD.bam 102.1 M 0 97.8 M 0.958 SE 76 76 native 0.0 M 87.0 M 78.7 M 0.771 0.94 0.94 17.05 150 1.01 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f653153-e429-46b9-a83e-2d52c1ca8878/@@download/cross_correlation_plot/ENCFF600AGN-ENCFF280YFB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB565HMJ,ENCLB039ZAJ" "bradley-bernstein:DNA_Lib 7979,bradley-bernstein:DNA_Lib 7848" "ENCFF600AGN,ENCFF280YFB" HiSeq 2500 2016-10-12T17:35:44.293671+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzyfpVj0369333ZQZZz6fJyz ENCSR107PGG https://www.encodeproject.org/experiments/ENCSR107PGG control Control-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF882WXC https://www.encodeproject.org/files/ENCFF882WXC/@@download/ENCFF882WXC.bam ENCFF562PFJ https://www.encodeproject.org/files/ENCFF562PFJ/@@download/ENCFF562PFJ.bam 82.3 M 0 79.8 M 0.970 SE 76 76 native 0.0 M 71.7 M 56.3 M 0.685 0.79 0.78 4.37 150 1.01 15.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/65cc0787-13d9-4b49-854b-f26f2794e16a/@@download/cross_correlation_plot/ENCFF549ALF-ENCFF207NLW-ENCFF253BJA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB154QFW bradley-bernstein:DNA_Lib 7218 "ENCFF549ALF,ENCFF207NLW,ENCFF253BJA" HiSeq 2500 2016-10-12T17:37:07.067497+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzyfpf003692x3BZK0zKz0GG ENCSR252QYR https://www.encodeproject.org/experiments/ENCSR252QYR "transcription factor,RNA binding protein" CTCF-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF546BUY https://www.encodeproject.org/files/ENCFF546BUY/@@download/ENCFF546BUY.bam ENCFF269TFM https://www.encodeproject.org/files/ENCFF269TFM/@@download/ENCFF269TFM.bam 57.3 M 0 55.6 M 0.971 SE 76 76 None 0.0 M 50.5 M 24.4 M 0.425 0.49 0.74 11.24 150 1.49 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/90c0016c-748c-4272-9601-472d6b5d9a54/@@download/cross_correlation_plot/ENCFF371AJH-ENCFF855FAY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB753UCH,ENCLB069MNK" "bradley-bernstein:DNA_Lib 7734,bradley-bernstein:DNA_Lib 7870" "ENCFF371AJH,ENCFF855FAY" HiSeq 2500 2016-04-23T06:20:20.782296+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF60Q036955JYv7Q69KX0Z ENCSR252QYR https://www.encodeproject.org/experiments/ENCSR252QYR "transcription factor,RNA binding protein" CTCF-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF176KZS https://www.encodeproject.org/files/ENCFF176KZS/@@download/ENCFF176KZS.bam ENCFF579OZA https://www.encodeproject.org/files/ENCFF579OZA/@@download/ENCFF579OZA.bam 36.4 M 0 34.9 M 0.958 SE 76 76 None 0.0 M 31.5 M 29.8 M 0.819 0.95 0.95 22.49 155 1.30 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d9b3aa2-8d56-4fd6-9af2-93835d1f2b8d/@@download/cross_correlation_plot/ENCFF440WEY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB590TMU bradley-bernstein:DNA_Lib 7857 ENCFF440WEY HiSeq 2500 2016-04-23T06:20:21.041771+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF62Q0369Gz9XV5Z6PxB0j ENCSR384LYW https://www.encodeproject.org/experiments/ENCSR384LYW "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF144YCB https://www.encodeproject.org/files/ENCFF144YCB/@@download/ENCFF144YCB.bam ENCFF919IIQ https://www.encodeproject.org/files/ENCFF919IIQ/@@download/ENCFF919IIQ.bam 35.4 M 0 34.8 M 0.980 SE 76 76 native 0.0 M 31.3 M 28.0 M 0.789 0.89 0.89 9.26 190 1.03 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/49d5eff8-1803-4f06-8bc1-a59e8b68f38a/@@download/cross_correlation_plot/ENCFF273BIC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB929LYK bradley-bernstein:DNA_Lib 7048 ENCFF273BIC HiSeq 2500 2016-10-29T15:31:56.443512+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B03K803699VK2qfkF2b4Kz ENCSR384LYW https://www.encodeproject.org/experiments/ENCSR384LYW "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF072MHQ https://www.encodeproject.org/files/ENCFF072MHQ/@@download/ENCFF072MHQ.bam ENCFF900VKF https://www.encodeproject.org/files/ENCFF900VKF/@@download/ENCFF900VKF.bam 37.2 M 0 35.8 M 0.961 SE 76 76 native 0.0 M 32.3 M 31.5 M 0.846 0.98 0.98 43.72 190 1.01 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4745af0-b63b-4316-a59e-4078d92b5d1a/@@download/cross_correlation_plot/ENCFF109ECO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB291ZMP bradley-bernstein:DNA_Lib 7976 ENCFF109ECO HiSeq 2500 2016-10-29T15:36:35.607192+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0B03X003691jJ0BZ9F1B58v ENCSR883XRM https://www.encodeproject.org/experiments/ENCSR883XRM "histone,histone modification,narrow histone mark" H2AFZ-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF774SHE https://www.encodeproject.org/files/ENCFF774SHE/@@download/ENCFF774SHE.bam ENCFF277MXD https://www.encodeproject.org/files/ENCFF277MXD/@@download/ENCFF277MXD.bam 37.5 M 0 36.8 M 0.981 SE 76 76 native 0.0 M 33.5 M 29.7 M 0.791 0.89 0.88 8.51 190 1.04 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/642c229c-9913-46c1-8d32-1f0fb1a8232a/@@download/cross_correlation_plot/ENCFF359IWW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB174ASM bradley-bernstein:DNA_Lib 7740 ENCFF359IWW HiSeq 2500 2016-10-12T17:30:36.410546+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzyfjF00369B6J3y98368PKj ENCSR883XRM https://www.encodeproject.org/experiments/ENCSR883XRM "histone,histone modification,narrow histone mark" H2AFZ-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF105JWN https://www.encodeproject.org/files/ENCFF105JWN/@@download/ENCFF105JWN.bam ENCFF403INY https://www.encodeproject.org/files/ENCFF403INY/@@download/ENCFF403INY.bam 65.0 M 0 62.1 M 0.956 SE 76 76 native 0.0 M 56.3 M 54.7 M 0.842 0.97 0.97 39.10 200 1.02 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/c052a425-979b-436b-9a99-4d59280fcd57/@@download/cross_correlation_plot/ENCFF183BPI-ENCFF187RIJ-ENCFF486TRD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB069JYS bradley-bernstein:DNA_Lib 7975 "ENCFF486TRD,ENCFF187RIJ,ENCFF183BPI" HiSeq 2500 2016-10-12T17:34:35.542920+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzyfjP80369Kpz6J6j30KQjZ ENCSR507UDH https://www.encodeproject.org/experiments/ENCSR507UDH "histone,histone modification,narrow histone mark" H3K27ac-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF891WDF https://www.encodeproject.org/files/ENCFF891WDF/@@download/ENCFF891WDF.bam ENCFF597KGJ https://www.encodeproject.org/files/ENCFF597KGJ/@@download/ENCFF597KGJ.bam 102.0 M 0 99.6 M 0.976 SE "76,74" 74 74 0.0 M 91.7 M 81.5 M 0.800 0.89 0.90 9.86 210 1.08 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/c362e3c0-8e6e-4955-89fd-cbf89ed73114/@@download/cross_correlation_plot/ENCFF667AVG-ENCFF343XGX_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB640DXN,ENCLB094CKY" "bradley-bernstein:DNA_Lib 7297,bradley-bernstein:DNA_Lib 7046" "ENCFF667AVG,ENCFF343XGX" HiSeq 2500 2016-08-09T23:37:18.809435+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byb1898036963Y1bP02VGz0j ENCSR507UDH https://www.encodeproject.org/experiments/ENCSR507UDH "histone,histone modification,narrow histone mark" H3K27ac-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF098YME https://www.encodeproject.org/files/ENCFF098YME/@@download/ENCFF098YME.bam ENCFF107NZQ https://www.encodeproject.org/files/ENCFF107NZQ/@@download/ENCFF107NZQ.bam 50.0 M 0 48.2 M 0.965 SE 76 76 native 0.0 M 44.5 M 41.1 M 0.822 0.92 0.93 14.19 195 1.18 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/1775c58c-2e91-4b69-9b3a-09a7115e9393/@@download/cross_correlation_plot/ENCFF778YPM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB798HDH bradley-bernstein:DNA_Lib 7855 ENCFF778YPM HiSeq 2500 2016-08-09T16:53:04.531031+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV5Kj03696GPBjjv2bkQ05 ENCSR637RLN https://www.encodeproject.org/experiments/ENCSR637RLN "histone,histone modification,broad histone mark" H3K27me3-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF523TBZ https://www.encodeproject.org/files/ENCFF523TBZ/@@download/ENCFF523TBZ.bam ENCFF124LUT https://www.encodeproject.org/files/ENCFF124LUT/@@download/ENCFF124LUT.bam 125.6 M 0 121.0 M 0.964 SE "76,74" 74 native 0.0 M 109.6 M 98.9 M 0.788 0.91 0.91 10.90 240 1.00 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/fce83aa6-88e2-4934-ab79-c3d11f1f4b27/@@download/cross_correlation_plot/ENCFF951QVB-ENCFF730TKN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB693LRT,ENCLB414PSR" "bradley-bernstein:DNA_Lib 7047,bradley-bernstein:DNA_Lib 7298" "ENCFF951QVB,ENCFF730TKN" HiSeq 2500 2016-10-13T16:39:43.802444+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzPPvj0369BXpF7zZK38fbJ ENCSR637RLN https://www.encodeproject.org/experiments/ENCSR637RLN "histone,histone modification,broad histone mark" H3K27me3-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF208KVX https://www.encodeproject.org/files/ENCFF208KVX/@@download/ENCFF208KVX.bam ENCFF591NFF https://www.encodeproject.org/files/ENCFF591NFF/@@download/ENCFF591NFF.bam 63.4 M 0 60.1 M 0.948 SE 76 76 native 0.0 M 53.7 M 51.7 M 0.816 0.97 0.97 33.47 535 1.00 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/08f42850-c22c-4a3a-b0ed-e0af6411acc7/@@download/cross_correlation_plot/ENCFF944QYP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB505SWB bradley-bernstein:DNA_Lib 7854 ENCFF944QYP HiSeq 2500 2016-10-13T16:36:42.264684+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzPQ000369BXpF7zZK38fbb ENCSR034BEQ https://www.encodeproject.org/experiments/ENCSR034BEQ "histone,histone modification,broad histone mark" H3K36me3-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF749VZP https://www.encodeproject.org/files/ENCFF749VZP/@@download/ENCFF749VZP.bam ENCFF972EPF https://www.encodeproject.org/files/ENCFF972EPF/@@download/ENCFF972EPF.bam 44.0 M 0 42.8 M 0.972 SE 76 None 0.0 M 37.8 M 36.5 M 0.831 0.97 0.97 32.59 225 1.01 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ffaf5b9-f7fa-49ad-bf39-3f0cc927bd78/@@download/cross_correlation_plot/ENCFF997MXD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB161XYT bradley-bernstein:DNA_Lib 7043 ENCFF997MXD HiSeq 2500 2016-04-23T06:18:59.044011+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF6q003690784p219VpQ7Q ENCSR034BEQ https://www.encodeproject.org/experiments/ENCSR034BEQ "histone,histone modification,broad histone mark" H3K36me3-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF657BPE https://www.encodeproject.org/files/ENCFF657BPE/@@download/ENCFF657BPE.bam ENCFF140BJH https://www.encodeproject.org/files/ENCFF140BJH/@@download/ENCFF140BJH.bam 20.3 M 0 19.7 M 0.969 SE 76 None 0.0 M 17.6 M 17.2 M 0.846 0.98 0.98 61.23 120 1.01 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a30a385-9304-40ba-89b5-001c17c4805a/@@download/cross_correlation_plot/ENCFF980AUK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB780JMR bradley-bernstein:DNA_Lib 7872 ENCFF980AUK HiSeq 2500 2016-04-23T06:18:31.146120+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF6xQ0369941Gv159bj43G ENCSR689QUB https://www.encodeproject.org/experiments/ENCSR689QUB "histone,histone modification,broad histone mark" H3K4me1-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF686RTB https://www.encodeproject.org/files/ENCFF686RTB/@@download/ENCFF686RTB.bam ENCFF042KQW https://www.encodeproject.org/files/ENCFF042KQW/@@download/ENCFF042KQW.bam 60.0 M 0 56.9 M 0.949 SE 76 None 0.0 M 52.6 M 50.0 M 0.834 0.95 0.95 21.33 165 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec2ebe8c-918c-4abd-8723-db56fdcd2ff6/@@download/cross_correlation_plot/ENCFF442QTG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB312QWK bradley-bernstein:DNA_Lib 7851 ENCFF442QTG HiSeq 2500 2016-04-23T06:19:32.132657+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF6j00369Jy28Xy197y37B ENCSR689QUB https://www.encodeproject.org/experiments/ENCSR689QUB "histone,histone modification,broad histone mark" H3K4me1-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF533YPY https://www.encodeproject.org/files/ENCFF533YPY/@@download/ENCFF533YPY.bam ENCFF732FXE https://www.encodeproject.org/files/ENCFF732FXE/@@download/ENCFF732FXE.bam 49.0 M 0 47.4 M 0.966 SE 76 None 0.0 M 43.3 M 28.2 M 0.576 0.65 0.64 2.57 200 1.01 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/dfb35ada-0cd7-4d66-bd2d-c6dd9aec28c0/@@download/cross_correlation_plot/ENCFF753JZJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB522NNA bradley-bernstein:DNA_Lib 7757 ENCFF753JZJ HiSeq 2500 2016-04-23T06:18:48.932491+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF6k80369746Pyz19Gv8FV ENCSR220XCD https://www.encodeproject.org/experiments/ENCSR220XCD "histone,histone modification,narrow histone mark" H3K4me2-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF446COF https://www.encodeproject.org/files/ENCFF446COF/@@download/ENCFF446COF.bam ENCFF610PRS https://www.encodeproject.org/files/ENCFF610PRS/@@download/ENCFF610PRS.bam 56.9 M 0 54.2 M 0.954 SE 76 76 native 0.0 M 50.4 M 47.0 M 0.828 0.93 0.94 16.34 190 1.24 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/602df480-c311-490e-9608-5db42da54430/@@download/cross_correlation_plot/ENCFF976VRL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB976TQV bradley-bernstein:DNA_Lib 7852 ENCFF976VRL HiSeq 2500 2016-08-09T16:46:40.251516+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZVbB80369GjVY5303K3FXz ENCSR220XCD https://www.encodeproject.org/experiments/ENCSR220XCD "histone,histone modification,narrow histone mark" H3K4me2-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF790WIM https://www.encodeproject.org/files/ENCFF790WIM/@@download/ENCFF790WIM.bam ENCFF535VPO https://www.encodeproject.org/files/ENCFF535VPO/@@download/ENCFF535VPO.bam 40.1 M 0 38.6 M 0.964 SE 76 76 native 0.0 M 35.4 M 33.9 M 0.845 0.96 0.96 24.93 220 1.08 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/feb66c1b-464c-4285-b771-b5d3f8ae611a/@@download/cross_correlation_plot/ENCFF336PBH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB244HLM bradley-bernstein:DNA_Lib 7871 ENCFF336PBH HiSeq 2500 2016-08-09T16:45:42.909085+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZVbGj036961kVYx02z56v2 ENCSR442ZOI https://www.encodeproject.org/experiments/ENCSR442ZOI "histone,histone modification,narrow histone mark" H3K4me3-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF641FAI https://www.encodeproject.org/files/ENCFF641FAI/@@download/ENCFF641FAI.bam ENCFF232HKV https://www.encodeproject.org/files/ENCFF232HKV/@@download/ENCFF232HKV.bam 48.7 M 0 47.3 M 0.970 SE 76 76 native 0.0 M 42.0 M 36.3 M 0.746 0.87 0.87 7.28 185 1.03 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc8d9fdb-c160-44e7-9573-92735f9739cf/@@download/cross_correlation_plot/ENCFF030JBI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB688QTT bradley-bernstein:DNA_Lib 7045 ENCFF030JBI HiSeq 2500 2016-10-13T16:38:46.947595+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzPJq003692g9xFyJVZX6Y3 ENCSR442ZOI https://www.encodeproject.org/experiments/ENCSR442ZOI "histone,histone modification,narrow histone mark" H3K4me3-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF893XXE https://www.encodeproject.org/files/ENCFF893XXE/@@download/ENCFF893XXE.bam ENCFF342NOL https://www.encodeproject.org/files/ENCFF342NOL/@@download/ENCFF342NOL.bam 46.0 M 0 43.8 M 0.953 SE 76 76 native 0.0 M 38.9 M 37.9 M 0.825 0.98 0.98 54.39 180 1.04 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/b81accf8-9dd3-44fe-8a5b-9cb4ba3d1971/@@download/cross_correlation_plot/ENCFF640DGP-ENCFF964RWY-ENCFF767RUN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB167ZLU bradley-bernstein:DNA_Lib 7853 "ENCFF640DGP,ENCFF767RUN,ENCFF964RWY" HiSeq 2500 2016-10-12T17:30:43.964440+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzyfy70036967Y839kKzZ23x ENCSR695HYL https://www.encodeproject.org/experiments/ENCSR695HYL "histone,histone modification,broad histone mark" H3K79me2-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF538FRD https://www.encodeproject.org/files/ENCFF538FRD/@@download/ENCFF538FRD.bam ENCFF579QQU https://www.encodeproject.org/files/ENCFF579QQU/@@download/ENCFF579QQU.bam 88.8 M 0 86.4 M 0.973 SE 76 76 native 0.0 M 78.5 M 69.6 M 0.784 0.89 0.89 8.93 200 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/4af6d91f-f432-4b2c-a816-af2338cb533a/@@download/cross_correlation_plot/ENCFF213XRW-ENCFF200AKD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB009QUF,ENCLB786QBI" "bradley-bernstein:DNA_Lib 7738,bradley-bernstein:DNA_Lib 7760" "ENCFF200AKD,ENCFF213XRW" HiSeq 2500 2016-10-12T17:28:25.225023+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzyfg3j0369PP83P69x0gFPB ENCSR695HYL https://www.encodeproject.org/experiments/ENCSR695HYL "histone,histone modification,broad histone mark" H3K79me2-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF845NNQ https://www.encodeproject.org/files/ENCFF845NNQ/@@download/ENCFF845NNQ.bam ENCFF733HBX https://www.encodeproject.org/files/ENCFF733HBX/@@download/ENCFF733HBX.bam 189.6 M 0 182.1 M 0.961 SE 76 76 native 0.0 M 166.0 M 156.8 M 0.827 0.95 0.95 19.24 200 1.00 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/44ad2972-0704-4254-a079-0b41db7bc346/@@download/cross_correlation_plot/ENCFF770ITA-ENCFF972CPO-ENCFF588LYQ-ENCFF047BBA-ENCFF355IQV-ENCFF429OFN-ENCFF594GCF-ENCFF716OUO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB751RVT,ENCLB389QNO,ENCLB809ERS,ENCLB284ZPJ" "bradley-bernstein:DNA_Lib 8022,bradley-bernstein:DNA_Lib 7953,bradley-bernstein:DNA_Lib 8023,bradley-bernstein:DNA_Lib 7952" "ENCFF594GCF,ENCFF047BBA,ENCFF355IQV,ENCFF429OFN,ENCFF972CPO,ENCFF770ITA,ENCFF716OUO,ENCFF588LYQ" HiSeq 2500 2016-11-12T05:37:55.943210+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03kPz803693F9g2gVxPbp7B ENCSR850ODD https://www.encodeproject.org/experiments/ENCSR850ODD "histone,histone modification,narrow histone mark" H3K9ac-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF900GCT https://www.encodeproject.org/files/ENCFF900GCT/@@download/ENCFF900GCT.bam ENCFF284FLP https://www.encodeproject.org/files/ENCFF284FLP/@@download/ENCFF284FLP.bam 22.9 M 0 22.0 M 0.958 SE 76 76 native 0.0 M 20.2 M 19.5 M 0.851 0.97 0.97 30.88 220 1.15 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ec16ad3-2344-4733-8691-0f55a180ae1b/@@download/cross_correlation_plot/ENCFF968WND.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB244XFF bradley-bernstein:DNA_Lib 7950 ENCFF968WND HiSeq 2500 2016-10-12T17:27:44.305739+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzyfj3Q0369P1b3BBbyX3Z4b ENCSR850ODD https://www.encodeproject.org/experiments/ENCSR850ODD "histone,histone modification,narrow histone mark" H3K9ac-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF977BPK https://www.encodeproject.org/files/ENCFF977BPK/@@download/ENCFF977BPK.bam 38.8 M 0 37.4 M 0.963 SE 76 76 native 0.0 M 34.8 M 27.2 M 0.702 0.78 0.78 4.37 200 1.23 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/961e0516-4b76-4403-a7c9-028346b3eacc/@@download/cross_correlation_plot/ENCFF821KTS-ENCFF853PFS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB593CVN bradley-bernstein:DNA_Lib 7759 "ENCFF821KTS,ENCFF853PFS" HiSeq 2500 2016-11-12T23:01:02.472700+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03kPF00369232QFyJ0kxq82 ENCSR484MFB https://www.encodeproject.org/experiments/ENCSR484MFB "histone,histone modification,broad histone mark" H3K9me2-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF226HNN https://www.encodeproject.org/files/ENCFF226HNN/@@download/ENCFF226HNN.bam ENCFF441QZI https://www.encodeproject.org/files/ENCFF441QZI/@@download/ENCFF441QZI.bam 33.6 M 0 32.5 M 0.967 SE 76 76 native 0.0 M 29.1 M 27.7 M 0.824 0.95 0.95 21.73 220 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/06769be3-f4b2-4df1-9cb5-376b3c11c7b9/@@download/cross_correlation_plot/ENCFF804ILO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB642SUE bradley-bernstein:DNA_Lib 7761 ENCFF804ILO HiSeq 2500 2017-01-24T22:04:47.805702+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F237ffj0369BQ3qg2vYVYbJv ENCSR484MFB https://www.encodeproject.org/experiments/ENCSR484MFB "histone,histone modification,broad histone mark" H3K9me2-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF182INZ https://www.encodeproject.org/files/ENCFF182INZ/@@download/ENCFF182INZ.bam ENCFF107HUO https://www.encodeproject.org/files/ENCFF107HUO/@@download/ENCFF107HUO.bam 30.2 M 0 29.5 M 0.977 SE 76 76 native 0.0 M 26.6 M 21.6 M 0.713 0.81 0.81 5.04 185 1.03 2.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f81e3c4-54d5-433e-bd47-721fae74318f/@@download/cross_correlation_plot/ENCFF546NZW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB517UEN bradley-bernstein:DNA_Lib 7739 ENCFF546NZW HiSeq 2500 2017-01-24T21:45:02.175239+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F237fx003695KX5x274Gx7q3 ENCSR758GMX https://www.encodeproject.org/experiments/ENCSR758GMX "histone,histone modification,broad histone mark" H3K9me3-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF824QCO https://www.encodeproject.org/files/ENCFF824QCO/@@download/ENCFF824QCO.bam ENCFF041EWJ https://www.encodeproject.org/files/ENCFF041EWJ/@@download/ENCFF041EWJ.bam 82.4 M 0 79.4 M 0.964 SE 76 76 native 0.0 M 67.9 M 60.7 M 0.736 0.90 0.90 9.54 210 1.01 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/9de28469-96bd-42bd-a023-8db46a91efe1/@@download/cross_correlation_plot/ENCFF193FJJ-ENCFF440LWH-ENCFF405BBY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB551TOJ bradley-bernstein:DNA_Lib 7044 "ENCFF440LWH,ENCFF405BBY,ENCFF193FJJ" HiSeq 2500 2016-10-13T02:53:15.128397+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23yVX003693Jf2v97QJ7Y3k ENCSR758GMX https://www.encodeproject.org/experiments/ENCSR758GMX "histone,histone modification,broad histone mark" H3K9me3-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF998PEX https://www.encodeproject.org/files/ENCFF998PEX/@@download/ENCFF998PEX.bam ENCFF863OUQ https://www.encodeproject.org/files/ENCFF863OUQ/@@download/ENCFF863OUQ.bam 36.5 M 0 34.9 M 0.955 SE 76 76 native 0.0 M 29.0 M 26.8 M 0.735 0.93 0.93 14.65 210 1.01 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/1dddc25e-2dee-41f1-993c-7e0d476da724/@@download/cross_correlation_plot/ENCFF323SWS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB041OBU bradley-bernstein:DNA_Lib 7873 ENCFF323SWS HiSeq 2500 2017-01-25T03:08:07.825842+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23yVj803693Jf2v97QJ7Y42 ENCSR758GMX https://www.encodeproject.org/experiments/ENCSR758GMX "histone,histone modification,broad histone mark" H3K9me3-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF578GSD https://www.encodeproject.org/files/ENCFF578GSD/@@download/ENCFF578GSD.bam ENCFF863OUQ https://www.encodeproject.org/files/ENCFF863OUQ/@@download/ENCFF863OUQ.bam 36.5 M 0 34.9 M 0.955 SE 76 None 0.0 M 29.0 M 26.8 M 0.735 0.93 0.93 14.65 210 1.01 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/2df948eb-5c3a-446e-9aa6-616f7cecce1a/@@download/cross_correlation_plot/ENCFF323SWS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB041OBU bradley-bernstein:DNA_Lib 7873 ENCFF323SWS HiSeq 2500 2016-04-23T06:19:00.994713+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF6f8036911XBkv59P748y ENCSR289TGF https://www.encodeproject.org/experiments/ENCSR289TGF "histone,histone modification,broad histone mark" H4K20me1-human hepatocyte in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF888UYL https://www.encodeproject.org/files/ENCFF888UYL/@@download/ENCFF888UYL.bam ENCFF052WNC https://www.encodeproject.org/files/ENCFF052WNC/@@download/ENCFF052WNC.bam 70.7 M 0 69.2 M 0.978 SE 76 76 native 0.0 M 62.9 M 21.6 M 0.305 0.35 0.26 1.14 145 1.05 4.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/50bbb785-bc5e-470a-9ba2-63b8c5fde4d8/@@download/cross_correlation_plot/ENCFF524ZWL-ENCFF516IKE-ENCFF682URC-ENCFF128WEA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB231KWG bradley-bernstein:DNA_Lib 7735 "ENCFF516IKE,ENCFF524ZWL,ENCFF128WEA,ENCFF682URC" HiSeq 2500 2016-11-30T23:13:09.224488+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03kQ5Q0369JB6G805xQGxqj ENCSR289TGF https://www.encodeproject.org/experiments/ENCSR289TGF "histone,histone modification,broad histone mark" H4K20me1-human hepatocyte in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF093IVV https://www.encodeproject.org/files/ENCFF093IVV/@@download/ENCFF093IVV.bam ENCFF372KAA https://www.encodeproject.org/files/ENCFF372KAA/@@download/ENCFF372KAA.bam 40.0 M 0 38.3 M 0.958 SE 76 76 native 0.0 M 34.5 M 32.7 M 0.816 0.95 0.95 19.84 200 1.01 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3ab4c9b-6f88-47fc-b90e-fd97d1b5d283/@@download/cross_correlation_plot/ENCFF153GOX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB914RRW bradley-bernstein:DNA_Lib 7949 ENCFF153GOX HiSeq 2500 2016-10-12T17:24:52.112371+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzyffpQ036904Qk74Vx6755q ENCSR180AIC https://www.encodeproject.org/experiments/ENCSR180AIC "transcription factor,chromatin remodeller" BRCA2-human HepG2 immortalized cell line bradley-bernstein ENCODE3 pending PE 36 HiSeq 2500 pipeline completed ENCSR514EOE https://www.encodeproject.org/experiments/ENCSR514EOE "transcription factor,chromatin remodeller" BRD4-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF946XIU https://www.encodeproject.org/files/ENCFF946XIU/@@download/ENCFF946XIU.bam ENCFF265KDY https://www.encodeproject.org/files/ENCFF265KDY/@@download/ENCFF265KDY.bam 41.3 M 0 40.3 M 0.975 SE 76 36 36 0.0 M 29.2 M 28.2 M 0.682 0.97 0.97 29.13 195 1.01 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/00b84f94-040b-43a0-9c09-0592476dbc34/@@download/cross_correlation_plot/ENCFF953UBF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB799DHF bradley-bernstein:DNA_Lib 6613 ENCFF953UBF HiSeq 2500 2016-10-26T16:38:19.355269+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F081g7j0369GJ6xQfbB7Bk35 ENCSR514EOE https://www.encodeproject.org/experiments/ENCSR514EOE "transcription factor,chromatin remodeller" BRD4-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF426USZ https://www.encodeproject.org/files/ENCFF426USZ/@@download/ENCFF426USZ.bam ENCFF097VKJ https://www.encodeproject.org/files/ENCFF097VKJ/@@download/ENCFF097VKJ.bam 26.0 M 0 25.7 M 0.989 SE 76 36 36 0.0 M 18.7 M 18.0 M 0.694 0.97 0.97 29.93 195 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/df7c886e-b98c-4c70-9395-b1b2cd08b98b/@@download/cross_correlation_plot/ENCFF946FEX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB047HAW bradley-bernstein:DNA_Lib 6873 ENCFF946FEX HiSeq 2500 2016-10-26T16:37:57.509832+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F081gGj03695YX1xgJBKFBQp ENCSR431FOF https://www.encodeproject.org/experiments/ENCSR431FOF "transcription factor,chromatin remodeller,RNA binding protein" CHD4-human HepG2 immortalized cell line bradley-bernstein ENCODE3 pending PE 36 HiSeq 2500 pipeline completed ENCSR000AME https://www.encodeproject.org/experiments/ENCSR000AME control Control-human HepG2 immortalized cell line bradley-bernstein ENCODE2 no fastqs pipeline completed ENCSR055XHN https://www.encodeproject.org/experiments/ENCSR055XHN control Control-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF943MYJ https://www.encodeproject.org/files/ENCFF943MYJ/@@download/ENCFF943MYJ.bam ENCFF303SPG https://www.encodeproject.org/files/ENCFF303SPG/@@download/ENCFF303SPG.bam 77.2 M 0 76.3 M 0.989 SE 76 36 36 0.0 M 58.0 M 56.6 M 0.733 0.98 0.98 44.93 245 1.01 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb60304f-70ba-499f-a304-afa289be937e/@@download/cross_correlation_plot/ENCFF474ZPM-ENCFF642ZJC-ENCFF066LYG-ENCFF162ADN_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB062JEV,ENCLB123IGA" "bradley-bernstein:DNA_Lib 6606,bradley-bernstein:DNA_Lib 6878" "ENCFF642ZJC,ENCFF066LYG,ENCFF474ZPM,ENCFF162ADN" HiSeq 2500 2017-02-04T00:34:54.378981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BKfy003693q2BXJ6ZxBzvf ENCSR055XHN https://www.encodeproject.org/experiments/ENCSR055XHN control Control-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF645CCA https://www.encodeproject.org/files/ENCFF645CCA/@@download/ENCFF645CCA.bam ENCFF122NRW https://www.encodeproject.org/files/ENCFF122NRW/@@download/ENCFF122NRW.bam 61.7 M 0 58.4 M 0.947 SE 36 36 36 0.0 M 42.0 M 40.6 M 0.659 0.97 0.98 40.71 280 1.02 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f441797-2755-4132-9e40-cdb64eb54f3e/@@download/cross_correlation_plot/ENCFF653JWL-ENCFF369RYY-ENCFF881CNC-ENCFF608CWZ-ENCFF356QYZ-ENCFF854ELY_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB323UJR bradley-bernstein:DNA_Lib 273 "ENCFF369RYY,ENCFF854ELY,ENCFF608CWZ,ENCFF356QYZ,ENCFF881CNC,ENCFF653JWL" HiSeq 2000 2017-02-03T23:49:22.232264+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BKg4Q03694xy8kJkZzXzKZ ENCSR055XHN https://www.encodeproject.org/experiments/ENCSR055XHN control Control-human HepG2 immortalized cell line 3 bradley-bernstein ENCODE3 GRCh38 ENCFF255TUT https://www.encodeproject.org/files/ENCFF255TUT/@@download/ENCFF255TUT.bam ENCFF274GMA https://www.encodeproject.org/files/ENCFF274GMA/@@download/ENCFF274GMA.bam 38.0 M 0 37.3 M 0.983 SE 76 36 36 0.0 M 28.4 M 27.7 M 0.730 0.98 0.98 47.88 190 1.01 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/30a65c36-3fa3-4ebf-9d99-e3f1e4adb37f/@@download/cross_correlation_plot/ENCFF574VLI-ENCFF463RRE_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB162WSO bradley-bernstein:DNA_Lib 6618 "ENCFF463RRE,ENCFF574VLI" HiSeq 2500 2017-02-03T23:12:04.648925+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BKgFQ03693q4Kq8J76FjQZ ENCSR000AMA https://www.encodeproject.org/experiments/ENCSR000AMA "transcription factor,RNA binding protein" CTCF-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF094DVS https://www.encodeproject.org/files/ENCFF094DVS/@@download/ENCFF094DVS.bam ENCFF767PUI https://www.encodeproject.org/files/ENCFF767PUI/@@download/ENCFF767PUI.bam 2.8 M 0 2.6 M 0.912 SE 36 36 native 0.0 M 1.9 M 1.8 M 0.648 0.96 0.96 23.67 155 6.09 3.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/830fc0cb-a1c4-41d3-91d3-8fb0a8615fc6/@@download/cross_correlation_plot/ENCFF000BED.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAZ ENCFF000BED Illumina Genome Analyzer IIe 2016-12-11T04:26:24.961711+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165x5Q03695v47P6433JJ37 ENCSR000AMA https://www.encodeproject.org/experiments/ENCSR000AMA "transcription factor,RNA binding protein" CTCF-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF031UNH https://www.encodeproject.org/files/ENCFF031UNH/@@download/ENCFF031UNH.bam ENCFF514KFF https://www.encodeproject.org/files/ENCFF514KFF/@@download/ENCFF514KFF.bam 20.7 M 0 14.0 M 0.675 SE 36 36 native 0.0 M 9.9 M 9.3 M 0.448 0.95 0.95 19.76 155 2.10 3.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/77cc4266-e0fc-4e9e-923d-4642ae71a72a/@@download/cross_correlation_plot/ENCFF000BEI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABA ENCFF000BEI Illumina Genome Analyzer IIe 2016-12-11T04:38:11.105409+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165xBQ0369B6ZyvJ8yKQXKJ ENCSR376FMN https://www.encodeproject.org/experiments/ENCSR376FMN "transcription factor,chromatin remodeller" EHMT2-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF243ARI https://www.encodeproject.org/files/ENCFF243ARI/@@download/ENCFF243ARI.bam ENCFF934DPB https://www.encodeproject.org/files/ENCFF934DPB/@@download/ENCFF934DPB.bam 23.1 M 0 22.1 M 0.953 SE 36 36 native 0.0 M 16.8 M 15.9 M 0.687 0.95 0.95 19.44 160 1.09 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/27f05eca-de6c-40ae-9707-cff607fe8385/@@download/cross_correlation_plot/ENCFF540AUD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB941EZN bradley-bernstein:DNA_Lib 6327 ENCFF540AUD HiSeq 2500 2017-03-07T19:33:42.253607+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2zGXP00369P5Q3v3kQGZgqb ENCSR376FMN https://www.encodeproject.org/experiments/ENCSR376FMN "transcription factor,chromatin remodeller" EHMT2-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF531RJB https://www.encodeproject.org/files/ENCFF531RJB/@@download/ENCFF531RJB.bam ENCFF065IKG https://www.encodeproject.org/files/ENCFF065IKG/@@download/ENCFF065IKG.bam 21.6 M 0 21.2 M 0.983 SE 36 36 native 0.0 M 16.1 M 14.8 M 0.687 0.92 0.92 12.68 300 1.02 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/47a05911-0b83-4b89-beb9-d0f78ab94f9c/@@download/cross_correlation_plot/ENCFF036XWQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB764GDD bradley-bernstein:DNA_Lib 6401 ENCFF036XWQ HiSeq 2500 2017-03-07T19:34:31.141388+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2zGXbj036973VjX3g5kq1fv ENCSR000ARI https://www.encodeproject.org/experiments/ENCSR000ARI "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF586GBV https://www.encodeproject.org/files/ENCFF586GBV/@@download/ENCFF586GBV.bam ENCFF982KPD https://www.encodeproject.org/files/ENCFF982KPD/@@download/ENCFF982KPD.bam 23.3 M 0 22.3 M 0.958 SE 36 36 native 0.0 M 17.2 M 12.5 M 0.536 0.74 0.74 4.01 375 1.04 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcb65697-537b-4007-bd86-360ee4261421/@@download/cross_correlation_plot/ENCFF000BEL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGL bradley-bernstein:DNA_Lib 225 ENCFF000BEL HiSeq 2000 2016-12-11T04:55:27.686133+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1668Q80369BgG8x1ygv1XfV ENCSR000ARI https://www.encodeproject.org/experiments/ENCSR000ARI "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF051ILA https://www.encodeproject.org/files/ENCFF051ILA/@@download/ENCFF051ILA.bam ENCFF723QHK https://www.encodeproject.org/files/ENCFF723QHK/@@download/ENCFF723QHK.bam 52.9 M 0 51.8 M 0.980 SE 36 36 native 0.0 M 39.5 M 34.8 M 0.657 0.89 0.89 8.60 210 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4612dd3-976f-4a25-bc41-c8b2a8662e5b/@@download/cross_correlation_plot/ENCFF000BEQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHB bradley-bernstein:DNA_Lib 228 ENCFF000BEQ HiSeq 2000 2016-12-11T08:42:11.601474+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1668bQ03692f1gp513PxgX5 ENCSR000AOK https://www.encodeproject.org/experiments/ENCSR000AOK "histone,histone modification,narrow histone mark" H2AFZ-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF108XXY https://www.encodeproject.org/files/ENCFF108XXY/@@download/ENCFF108XXY.bam ENCFF072BWT https://www.encodeproject.org/files/ENCFF072BWT/@@download/ENCFF072BWT.bam 35.9 M 0 31.0 M 0.865 SE 36 36 36 0.0 M 23.2 M 21.5 M 0.598 0.94 0.94 16.32 175 1.04 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcc7fdb7-83e4-41a2-9b96-f509ab51379d/@@download/cross_correlation_plot/ENCFF000BEP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKM ENCFF000BEP Illumina Genome Analyzer IIx 2016-11-05T17:39:16.382925+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk138036911ffQk1b9pPYz ENCSR000AMO https://www.encodeproject.org/experiments/ENCSR000AMO "histone,histone modification,narrow histone mark" H3K27ac-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF805KGN https://www.encodeproject.org/files/ENCFF805KGN/@@download/ENCFF805KGN.bam ENCFF025MPI https://www.encodeproject.org/files/ENCFF025MPI/@@download/ENCFF025MPI.bam 6.5 M 0 6.2 M 0.953 SE 36 36 native 0.0 M 5.0 M 4.8 M 0.733 0.96 0.96 25.41 175 1.95 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ee9c5a5-1eff-45f7-b1ce-c70362c2f982/@@download/cross_correlation_plot/ENCFF000BFD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQK ENCFF000BFD Illumina Genome Analyzer IIe 2016-08-09T15:57:58.292254+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYB9003696GPBjjv2bkQb7 ENCSR000AMO https://www.encodeproject.org/experiments/ENCSR000AMO "histone,histone modification,narrow histone mark" H3K27ac-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF686HFQ https://www.encodeproject.org/files/ENCFF686HFQ/@@download/ENCFF686HFQ.bam ENCFF449KNN https://www.encodeproject.org/files/ENCFF449KNN/@@download/ENCFF449KNN.bam 10.0 M 0 9.0 M 0.901 SE 36 36 native 0.0 M 7.1 M 6.6 M 0.662 0.94 0.94 17.09 195 1.70 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb2ef701-6b36-4666-bd49-0f3db3544fa3/@@download/cross_correlation_plot/ENCFF000BFH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQL ENCFF000BFH Illumina Genome Analyzer IIx 2016-08-09T15:58:16.294057+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYBF80369F97Byg82v2pkG ENCSR000AOL https://www.encodeproject.org/experiments/ENCSR000AOL "histone,histone modification,broad histone mark" H3K27me3-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF247LXA https://www.encodeproject.org/files/ENCFF247LXA/@@download/ENCFF247LXA.bam ENCFF767KYD https://www.encodeproject.org/files/ENCFF767KYD/@@download/ENCFF767KYD.bam 35.2 M 0 29.3 M 0.831 SE 36 36 36 0.0 M 21.3 M 20.3 M 0.576 0.96 0.96 25.83 190 1.04 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/297600ad-bef4-42ad-b37f-cdebb53132d8/@@download/cross_correlation_plot/ENCFF000BFU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUQ ENCFF000BFU Illumina Genome Analyzer II 2016-11-05T17:40:32.734358+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk1j803696zP1V5JfxK1zY ENCSR000AOL https://www.encodeproject.org/experiments/ENCSR000AOL "histone,histone modification,broad histone mark" H3K27me3-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF785SBQ https://www.encodeproject.org/files/ENCFF785SBQ/@@download/ENCFF785SBQ.bam ENCFF786ANA https://www.encodeproject.org/files/ENCFF786ANA/@@download/ENCFF786ANA.bam 11.7 M 0 10.7 M 0.913 SE 36 36 36 0.0 M 7.7 M 5.2 M 0.446 0.69 0.68 3.13 200 1.05 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/11630233-9cca-434b-9a5d-4e36fe2bac14/@@download/cross_correlation_plot/ENCFF000BFR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUP ENCFF000BFR Illumina Genome Analyzer IIx 2016-11-05T17:38:02.836655+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk29j03696zP1V5JfxK1zx ENCSR000AMB https://www.encodeproject.org/experiments/ENCSR000AMB "histone,histone modification,broad histone mark" H3K36me3-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF830FLY https://www.encodeproject.org/files/ENCFF830FLY/@@download/ENCFF830FLY.bam ENCFF363IOZ https://www.encodeproject.org/files/ENCFF363IOZ/@@download/ENCFF363IOZ.bam 7.1 M 0 6.8 M 0.965 SE 36 36 36 0.0 M 5.0 M 4.6 M 0.653 0.93 0.93 13.89 185 1.07 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/5feb491e-6768-45a4-b218-f2a6f46f5128/@@download/cross_correlation_plot/ENCFF000BFT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANT ENCFF000BFT Illumina Genome Analyzer IIe 2016-11-05T17:36:32.759123+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk9y8036945FQkxk8GJPXK ENCSR000AMB https://www.encodeproject.org/experiments/ENCSR000AMB "histone,histone modification,broad histone mark" H3K36me3-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF508EQJ https://www.encodeproject.org/files/ENCFF508EQJ/@@download/ENCFF508EQJ.bam ENCFF923PMX https://www.encodeproject.org/files/ENCFF923PMX/@@download/ENCFF923PMX.bam 18.0 M 0 8.3 M 0.460 SE 36 36 36 0.0 M 4.5 M 4.4 M 0.245 0.99 0.99 86.87 150 1.04 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/aaa1e1e5-3460-4490-8f97-faac612d6195/@@download/cross_correlation_plot/ENCFF000BFZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANU ENCFF000BFZ Illumina Genome Analyzer IIe 2016-11-05T17:36:38.531932+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkB2j03697vzB1y0B63VGg ENCSR000APV https://www.encodeproject.org/experiments/ENCSR000APV "histone,histone modification,broad histone mark" H3K4me1-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF256HMH https://www.encodeproject.org/files/ENCFF256HMH/@@download/ENCFF256HMH.bam ENCFF790MFM https://www.encodeproject.org/files/ENCFF790MFM/@@download/ENCFF790MFM.bam 31.0 M 0 30.6 M 0.987 SE 36 36 36 0.0 M 24.5 M 23.3 M 0.752 0.96 0.96 23.66 340 1.16 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a0dfa68-3528-4ced-952e-4b3b2ee69d70/@@download/cross_correlation_plot/ENCFF000BEX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMS ENCFF000BEX Illumina Genome Analyzer IIx 2016-11-05T17:38:23.456572+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk5y003693Yx5pkGB3y90x ENCSR000APV https://www.encodeproject.org/experiments/ENCSR000APV "histone,histone modification,broad histone mark" H3K4me1-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF372VZP https://www.encodeproject.org/files/ENCFF372VZP/@@download/ENCFF372VZP.bam ENCFF241SVO https://www.encodeproject.org/files/ENCFF241SVO/@@download/ENCFF241SVO.bam 31.3 M 0 31.0 M 0.991 SE 36 36 36 0.0 M 24.6 M 23.3 M 0.746 0.95 0.95 21.83 330 1.15 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/188b0ea5-554b-4d5a-a4f4-d424d0b2e104/@@download/cross_correlation_plot/ENCFF000BEY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMR ENCFF000BEY Illumina Genome Analyzer IIx 2016-11-05T17:38:14.097914+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk62Q036945FQkxk8GJPQq ENCSR000AMC https://www.encodeproject.org/experiments/ENCSR000AMC "histone,histone modification,narrow histone mark" H3K4me2-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF837GSJ https://www.encodeproject.org/files/ENCFF837GSJ/@@download/ENCFF837GSJ.bam ENCFF550LKV https://www.encodeproject.org/files/ENCFF550LKV/@@download/ENCFF550LKV.bam 21.6 M 0 17.8 M 0.825 SE 36 36 36 0.0 M 14.0 M 13.3 M 0.619 0.96 0.96 23.94 170 1.38 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/02185d11-9992-498f-9fe2-e2579f803383/@@download/cross_correlation_plot/ENCFF000BGD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADU ENCFF000BGD Illumina Genome Analyzer IIe 2016-11-05T17:36:29.810596+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkK2Q03699P6PYx8BPxQZ8 ENCSR000AMC https://www.encodeproject.org/experiments/ENCSR000AMC "histone,histone modification,narrow histone mark" H3K4me2-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF018EID https://www.encodeproject.org/files/ENCFF018EID/@@download/ENCFF018EID.bam ENCFF156EST https://www.encodeproject.org/files/ENCFF156EST/@@download/ENCFF156EST.bam 15.3 M 0 14.4 M 0.942 SE 36 36 36 0.0 M 11.6 M 11.1 M 0.723 0.96 0.96 24.12 160 1.52 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0447b83-08fd-40db-a8df-afec577a62bc/@@download/cross_correlation_plot/ENCFF000BGA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADV ENCFF000BGA Illumina Genome Analyzer IIe 2016-11-05T17:36:16.204625+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkK6Q0369B9XVbg4B76BFG ENCSR000AMP https://www.encodeproject.org/experiments/ENCSR000AMP "histone,histone modification,narrow histone mark" H3K4me3-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF959HGH https://www.encodeproject.org/files/ENCFF959HGH/@@download/ENCFF959HGH.bam ENCFF767YNH https://www.encodeproject.org/files/ENCFF767YNH/@@download/ENCFF767YNH.bam 10.2 M 0 9.8 M 0.962 SE 36 36 native 0.0 M 7.9 M 7.2 M 0.707 0.92 0.92 13.40 165 2.65 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff8d51da-e0d3-43f8-b9a5-6109edbe8e5a/@@download/cross_correlation_plot/ENCFF000BGE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABP ENCFF000BGE Illumina Genome Analyzer IIe 2016-08-20T00:43:40.460672+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZPJ803696k6PjpZ95Bxk5 ENCSR000AMP https://www.encodeproject.org/experiments/ENCSR000AMP "histone,histone modification,narrow histone mark" H3K4me3-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF730FGK https://www.encodeproject.org/files/ENCFF730FGK/@@download/ENCFF730FGK.bam ENCFF958QQL https://www.encodeproject.org/files/ENCFF958QQL/@@download/ENCFF958QQL.bam 11.6 M 0 10.6 M 0.912 SE 36 36 native 0.0 M 8.1 M 7.8 M 0.675 0.97 0.97 34.67 200 1.44 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/007c9f5c-2832-4adb-b370-ef7a85401672/@@download/cross_correlation_plot/ENCFF000BGF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABQ ENCFF000BGF Illumina Genome Analyzer IIx 2016-08-20T00:44:16.568860+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZPPj03694QXJjqj94ZP01 ENCSR575RRX https://www.encodeproject.org/experiments/ENCSR575RRX "histone,histone modification,narrow histone mark" H3K4me3-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF360OCU https://www.encodeproject.org/files/ENCFF360OCU/@@download/ENCFF360OCU.bam ENCFF313EOB https://www.encodeproject.org/files/ENCFF313EOB/@@download/ENCFF313EOB.bam 26.7 M 0 26.2 M 0.981 SE 76 36 36 0.0 M 20.7 M 19.7 M 0.738 0.95 0.95 21.27 210 1.20 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/776aafd9-e3ba-4096-9f9b-7416e124ae7c/@@download/cross_correlation_plot/ENCFF901NZE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB070FLV bradley-bernstein:DNA_Lib 5585 ENCFF901NZE HiSeq 2500 2016-08-09T16:44:20.268674+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV9P80369Kqg9Fjv2vpQBP ENCSR575RRX https://www.encodeproject.org/experiments/ENCSR575RRX "histone,histone modification,narrow histone mark" H3K4me3-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF060PGB https://www.encodeproject.org/files/ENCFF060PGB/@@download/ENCFF060PGB.bam ENCFF760ULL https://www.encodeproject.org/files/ENCFF760ULL/@@download/ENCFF760ULL.bam 23.5 M 0 22.3 M 0.951 SE 36 36 36 0.0 M 16.9 M 14.0 M 0.597 0.90 0.90 10.12 200 1.07 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/97a7457d-fa34-4c49-8cf2-89f6bb651776/@@download/cross_correlation_plot/ENCFF084IJQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB988VAO bradley-bernstein:DNA_Lib 4589 ENCFF084IJQ HiSeq 2500 2016-08-09T16:44:24.027545+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV9X0036961kVYx02z56Pp ENCSR000AOM https://www.encodeproject.org/experiments/ENCSR000AOM "histone,histone modification,broad histone mark" H3K79me2-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF903AHL https://www.encodeproject.org/files/ENCFF903AHL/@@download/ENCFF903AHL.bam ENCFF832SNF https://www.encodeproject.org/files/ENCFF832SNF/@@download/ENCFF832SNF.bam 35.9 M 0 32.0 M 0.890 SE 36 36 36 0.0 M 24.7 M 23.4 M 0.651 0.95 0.95 21.47 110 1.08 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e99c3d2-860c-4511-ad3e-148ef66360e2/@@download/cross_correlation_plot/ENCFF000BGR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIO ENCFF000BGR Illumina Genome Analyzer IIx 2016-11-05T17:34:52.755950+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkXv00369B9XVbg4B76BPk ENCSR000AMD https://www.encodeproject.org/experiments/ENCSR000AMD "histone,histone modification,narrow histone mark" H3K9ac-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF798OBX https://www.encodeproject.org/files/ENCFF798OBX/@@download/ENCFF798OBX.bam ENCFF934CRE https://www.encodeproject.org/files/ENCFF934CRE/@@download/ENCFF934CRE.bam 24.7 M 0 19.2 M 0.779 SE 36 36 36 0.0 M 14.2 M 12.9 M 0.522 0.93 0.94 15.95 190 1.47 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2850df8-df43-4f95-9f05-8c5a06daf916/@@download/cross_correlation_plot/ENCFF000BGS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATV ENCFF000BGS Illumina Genome Analyzer IIe 2016-11-05T17:35:07.448173+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkV780369PbJv8fGB41f99 ENCSR000AMD https://www.encodeproject.org/experiments/ENCSR000AMD "histone,histone modification,narrow histone mark" H3K9ac-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF583ZEK https://www.encodeproject.org/files/ENCFF583ZEK/@@download/ENCFF583ZEK.bam ENCFF834XSO https://www.encodeproject.org/files/ENCFF834XSO/@@download/ENCFF834XSO.bam 8.7 M 0 7.9 M 0.906 SE 36 36 36 0.0 M 6.2 M 5.2 M 0.597 0.84 0.84 6.06 190 1.65 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/78c03330-365d-42f7-9200-fb50ef55eb54/@@download/cross_correlation_plot/ENCFF000BGQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATU ENCFF000BGQ Illumina Genome Analyzer IIe 2016-11-05T17:34:14.660723+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkVJ00369PbJv8fGB41fBJ ENCSR000ATD https://www.encodeproject.org/experiments/ENCSR000ATD "histone,histone modification,broad histone mark" H3K9me3-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF693WQC https://www.encodeproject.org/files/ENCFF693WQC/@@download/ENCFF693WQC.bam ENCFF743GMN https://www.encodeproject.org/files/ENCFF743GMN/@@download/ENCFF743GMN.bam 80.3 M 0 75.2 M 0.937 SE 36 36 36 0.0 M 33.3 M 28.7 M 0.357 0.87 0.89 9.35 275 1.04 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/8638e79f-90f0-41e2-86de-99733f986886/@@download/cross_correlation_plot/ENCFF000BFK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHP ENCFF000BFK HiSeq 2000 2016-11-05T17:40:06.231201+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk2y80369BV4Z6KQV32jJp ENCSR000ATD https://www.encodeproject.org/experiments/ENCSR000ATD "histone,histone modification,broad histone mark" H3K9me3-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF562AOI https://www.encodeproject.org/files/ENCFF562AOI/@@download/ENCFF562AOI.bam ENCFF312GOX https://www.encodeproject.org/files/ENCFF312GOX/@@download/ENCFF312GOX.bam 62.0 M 0 59.7 M 0.963 SE 36 36 36 0.0 M 34.4 M 32.7 M 0.527 0.95 0.96 23.55 200 1.02 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c92314c-6367-4fb0-8907-c003bfafc134/@@download/cross_correlation_plot/ENCFF000BFI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHQ bradley-bernstein:DNA_Lib 227 ENCFF000BFI HiSeq 2000 2016-11-05T17:40:06.343669+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk3k803696QVKGb5b17zy9 ENCSR000AMQ https://www.encodeproject.org/experiments/ENCSR000AMQ "histone,histone modification,broad histone mark" H4K20me1-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF310GTD https://www.encodeproject.org/files/ENCFF310GTD/@@download/ENCFF310GTD.bam ENCFF314XJV https://www.encodeproject.org/files/ENCFF314XJV/@@download/ENCFF314XJV.bam 24.9 M 0 21.0 M 0.844 SE 36 36 36 0.0 M 15.8 M 11.9 M 0.477 0.78 0.78 4.44 190 1.02 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd1fa761-da9e-48d3-9394-d6b1dc042275/@@download/cross_correlation_plot/ENCFF000BHC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAJ ENCFF000BHC Illumina Genome Analyzer IIx 2016-11-05T17:38:07.804851+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk5b80369P6G90pZB0zyjp ENCSR000AMQ https://www.encodeproject.org/experiments/ENCSR000AMQ "histone,histone modification,broad histone mark" H4K20me1-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF221MCL https://www.encodeproject.org/files/ENCFF221MCL/@@download/ENCFF221MCL.bam ENCFF734XON https://www.encodeproject.org/files/ENCFF734XON/@@download/ENCFF734XON.bam 11.4 M 0 11.0 M 0.968 SE 36 36 36 0.0 M 8.5 M 8.2 M 0.716 0.96 0.96 22.93 165 1.03 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/09929632-2984-430e-b39b-28fea1f3912e/@@download/cross_correlation_plot/ENCFF000BGX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAI ENCFF000BGX Illumina Genome Analyzer IIe 2016-11-05T17:37:22.830713+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk5k803696jy9Kv0B4Y6Z1 ENCSR362CPB https://www.encodeproject.org/experiments/ENCSR362CPB "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF530BMT https://www.encodeproject.org/files/ENCFF530BMT/@@download/ENCFF530BMT.bam ENCFF835LRT https://www.encodeproject.org/files/ENCFF835LRT/@@download/ENCFF835LRT.bam 27.9 M 0 27.0 M 0.966 SE 36 36 native 0.0 M 20.7 M 18.4 M 0.660 0.89 0.89 8.82 170 1.08 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/5744c69d-a13e-49e9-9633-962de8c7185b/@@download/cross_correlation_plot/ENCFF058HDH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB724DQJ bradley-bernstein:DNA_Lib 6329 ENCFF058HDH HiSeq 2500 2017-03-07T19:36:38.759137+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2zGbJ00369J2Y6G3fYx7VBv ENCSR362CPB https://www.encodeproject.org/experiments/ENCSR362CPB "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF717JQH https://www.encodeproject.org/files/ENCFF717JQH/@@download/ENCFF717JQH.bam ENCFF832UVN https://www.encodeproject.org/files/ENCFF832UVN/@@download/ENCFF832UVN.bam 31.9 M 0 31.4 M 0.982 SE 36 36 native 0.0 M 24.0 M 21.2 M 0.664 0.88 0.88 8.60 285 1.02 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/56f61b68-a230-4c0f-bbbf-104845665f4d/@@download/cross_correlation_plot/ENCFF547JWR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695CSO bradley-bernstein:DNA_Lib 6403 ENCFF547JWR HiSeq 2500 2017-03-07T19:36:39.402179+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2zGbjj0369994fv3jBY6XXQ ENCSR492BYP https://www.encodeproject.org/experiments/ENCSR492BYP "transcription factor,chromatin remodeller,RNA binding protein" KAT2B-human HepG2 immortalized cell line bradley-bernstein ENCODE3 pending PE 36 HiSeq 2500 pipeline completed ENCSR115BLD https://www.encodeproject.org/experiments/ENCSR115BLD "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human HepG2 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF627NWR https://www.encodeproject.org/files/ENCFF627NWR/@@download/ENCFF627NWR.bam ENCFF787ZXB https://www.encodeproject.org/files/ENCFF787ZXB/@@download/ENCFF787ZXB.bam 78.1 M 0 73.8 M 0.945 SE 36 36 36 0.0 M 55.0 M 48.5 M 0.621 0.89 0.90 9.74 230 1.06 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/c04441cf-f7ac-4b20-a927-dde2a4cc8df5/@@download/cross_correlation_plot/ENCFF989EPR-ENCFF215QNG_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB007NDA,ENCLB464DVZ" "bradley-bernstein:DNA_Lib 1591,bradley-bernstein:DNA_Lib 1621" "ENCFF989EPR,ENCFF215QNG" HiSeq 2000 2016-10-26T16:41:04.574364+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F081fxj0369KPb3j15B4p8V9 ENCSR115BLD https://www.encodeproject.org/experiments/ENCSR115BLD "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human HepG2 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF367ZGL https://www.encodeproject.org/files/ENCFF367ZGL/@@download/ENCFF367ZGL.bam ENCFF329HCO https://www.encodeproject.org/files/ENCFF329HCO/@@download/ENCFF329HCO.bam 37.0 M 0 36.0 M 0.973 SE 36 36 36 0.0 M 27.3 M 22.9 M 0.619 0.84 0.84 6.26 240 1.28 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/11c636e8-1baf-407f-aba2-d76c88ce8a7a/@@download/cross_correlation_plot/ENCFF750VZA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB822AWT bradley-bernstein:DNA_Lib 6216 ENCFF750VZA HiSeq 2500 2016-10-26T16:37:40.913262+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F081g280369BqVfYq19ZB8v0 ENCSR247AJU https://www.encodeproject.org/experiments/ENCSR247AJU "transcription factor,chromatin remodeller" KDM5B-human HepG2 immortalized cell line bradley-bernstein ENCODE3 pending PE 36 HiSeq 2500 pipeline completed ENCSR886JOA https://www.encodeproject.org/experiments/ENCSR886JOA "transcription factor,chromatin remodeller" KMT2B-human HepG2 immortalized cell line bradley-bernstein ENCODE3 pending PE 36 HiSeq 2500 pipeline completed ENCSR419KSZ https://www.encodeproject.org/experiments/ENCSR419KSZ "transcription factor,chromatin remodeller" NCOR1-human HepG2 immortalized cell line bradley-bernstein ENCODE3 pending PE 36 HiSeq 2500 pipeline completed ENCSR691KXB https://www.encodeproject.org/experiments/ENCSR691KXB "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human HepG2 immortalized cell line bradley-bernstein ENCODE3 pending PE 36 HiSeq 2500 pipeline completed ENCSR773IYZ https://www.encodeproject.org/experiments/ENCSR773IYZ control Control-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF754UFV https://www.encodeproject.org/files/ENCFF754UFV/@@download/ENCFF754UFV.bam ENCFF809HFR https://www.encodeproject.org/files/ENCFF809HFR/@@download/ENCFF809HFR.bam 138.7 M 0 132.5 M 0.956 PE 76 76 None 56.6 M 0.0 M 50.0 M 0.722 0.90 0.90 10.17 200 1.07 3.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec6d235c-75c1-4fff-8d75-d4fdcb869b65/@@download/cross_correlation_plot/ENCFF267XUNENCFF273UTA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB979OXO bradley-bernstein:DNA_Lib 6323 "ENCFF267XUN,ENCFF273UTA" HiSeq 2500 2016-05-25T14:20:11.855867+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx2BX900369F1B8J0GKYXg9g ENCSR773IYZ https://www.encodeproject.org/experiments/ENCSR773IYZ control Control-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF992ZBS https://www.encodeproject.org/files/ENCFF992ZBS/@@download/ENCFF992ZBS.bam ENCFF788NYF https://www.encodeproject.org/files/ENCFF788NYF/@@download/ENCFF788NYF.bam 69.3 M 0 66.3 M 0.957 SE 76 76 native 0.0 M 58.3 M 50.9 M 0.734 0.93 0.93 14.17 200 1.02 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/173d3712-f93f-4430-875a-8e2059b317bc/@@download/cross_correlation_plot/ENCFF267XUN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB979OXO bradley-bernstein:DNA_Lib 6323 ENCFF267XUN HiSeq 2500 2017-01-06T16:09:23.331308+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gGj8Q0369Pqg232ZQGJ1q2 ENCSR773IYZ https://www.encodeproject.org/experiments/ENCSR773IYZ control Control-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF237PRF https://www.encodeproject.org/files/ENCFF237PRF/@@download/ENCFF237PRF.bam ENCFF592YCC https://www.encodeproject.org/files/ENCFF592YCC/@@download/ENCFF592YCC.bam 30.6 M 0 29.5 M 0.966 SE 76 76 native 0.0 M 26.1 M 23.7 M 0.777 0.95 0.95 19.81 205 1.03 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/21e90062-8ddc-4de8-904f-ce80d24b7701/@@download/cross_correlation_plot/ENCFF087KQG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB805XQM bradley-bernstein:DNA_Lib 6325 ENCFF087KQG HiSeq 2500 2017-01-06T16:04:21.219542+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gGjJj0369Pqg232ZQGJ1qK ENCSR773IYZ https://www.encodeproject.org/experiments/ENCSR773IYZ control Control-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF408TVJ https://www.encodeproject.org/files/ENCFF408TVJ/@@download/ENCFF408TVJ.bam ENCFF449PDH https://www.encodeproject.org/files/ENCFF449PDH/@@download/ENCFF449PDH.bam 61.1 M 0 59.3 M 0.970 PE 76 76 None 26.0 M 0.0 M 23.8 M 0.780 0.93 0.93 13.76 200 1.11 5.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/20620749-b4b4-4616-a4fb-c1ada7e7dfb7/@@download/cross_correlation_plot/ENCFF087KQGENCFF010AGB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB805XQM bradley-bernstein:DNA_Lib 6325 "ENCFF010AGB,ENCFF087KQG" HiSeq 2500 2016-05-25T14:12:15.521790+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx2BVyQ03697xV9JQkvg4fYz ENCSR908FQA https://www.encodeproject.org/experiments/ENCSR908FQA "histone,histone modification,narrow histone mark" H2AFZ-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF345LJW https://www.encodeproject.org/files/ENCFF345LJW/@@download/ENCFF345LJW.bam ENCFF235IVQ https://www.encodeproject.org/files/ENCFF235IVQ/@@download/ENCFF235IVQ.bam 87.1 M 0 82.6 M 0.948 PE 76 76 native 35.4 M 0.0 M 27.0 M 0.619 0.76 0.76 4.09 215 1.07 8.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/7060d0d4-ad73-4f70-851c-c719b6e8794f/@@download/cross_correlation_plot/ENCFF073OPB-ENCFF052LZJ_pooledENCFF283FNC-ENCFF688ZGY_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB312OGJ,ENCLB271JAZ" "bradley-bernstein:DNA_Lib 6496,bradley-bernstein:DNA_Lib 6510" "ENCFF283FNC,ENCFF688ZGY,ENCFF073OPB,ENCFF052LZJ" HiSeq 2500 2016-11-07T03:23:31.522304+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJX5j03698kJz2gxb7gp6j ENCSR908FQA https://www.encodeproject.org/experiments/ENCSR908FQA "histone,histone modification,narrow histone mark" H2AFZ-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF499QNE https://www.encodeproject.org/files/ENCFF499QNE/@@download/ENCFF499QNE.bam ENCFF534SEG https://www.encodeproject.org/files/ENCFF534SEG/@@download/ENCFF534SEG.bam 150.8 M 0 144.2 M 0.956 PE 76 76 native 62.1 M 0.0 M 59.1 M 0.783 0.95 0.95 20.77 175 1.05 3.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c217f3e-7b0a-4a93-9b4d-94a764037233/@@download/cross_correlation_plot/ENCFF702ZHIENCFF037KCG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB508EBJ bradley-bernstein:DNA_Lib 6366 "ENCFF702ZHI,ENCFF037KCG" HiSeq 2500 2016-11-07T03:33:24.205738+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJXBQ036911ffQk1b9pX6y ENCSR313NJN https://www.encodeproject.org/experiments/ENCSR313NJN "histone,histone modification,broad histone mark" H3F3A-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF913VTT https://www.encodeproject.org/files/ENCFF913VTT/@@download/ENCFF913VTT.bam ENCFF793OSU https://www.encodeproject.org/files/ENCFF793OSU/@@download/ENCFF793OSU.bam 49.4 M 0 47.3 M 0.957 SE 76 76 native 0.0 M 41.1 M 39.2 M 0.794 0.96 0.96 26.49 175 1.01 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd5ff60f-f895-475b-b68d-a27bef9a4962/@@download/cross_correlation_plot/ENCFF473ZAE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB862HRK bradley-bernstein:DNA_Lib 6695 ENCFF473ZAE HiSeq 2500 2017-01-09T19:39:12.218384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqPXQ03692JY2V78v4y136 ENCSR313NJN https://www.encodeproject.org/experiments/ENCSR313NJN "histone,histone modification,broad histone mark" H3F3A-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF846BPZ https://www.encodeproject.org/files/ENCFF846BPZ/@@download/ENCFF846BPZ.bam ENCFF046PFG https://www.encodeproject.org/files/ENCFF046PFG/@@download/ENCFF046PFG.bam 77.3 M 0 71.7 M 0.928 SE 76 76 native 0.0 M 62.9 M 59.8 M 0.773 0.95 0.95 21.99 205 1.01 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/52939238-f190-4764-a07a-f082d6a4456e/@@download/cross_correlation_plot/ENCFF644BCT-ENCFF519PHC-ENCFF448JEE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB425TPY bradley-bernstein:DNA_Lib 6511 "ENCFF519PHC,ENCFF644BCT,ENCFF448JEE" HiSeq 2500 2017-01-09T22:26:02.922331+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqPpQ03692ZFYJGFPF079v ENCSR729ENO https://www.encodeproject.org/experiments/ENCSR729ENO "histone,histone modification,narrow histone mark" H3K27ac-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF403VXK https://www.encodeproject.org/files/ENCFF403VXK/@@download/ENCFF403VXK.bam ENCFF796JKM https://www.encodeproject.org/files/ENCFF796JKM/@@download/ENCFF796JKM.bam 43.7 M 0 41.3 M 0.947 PE 76 76 native 17.9 M 0.0 M 16.3 M 0.748 0.91 0.91 11.32 200 1.13 4.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/eadf70f6-390c-4573-b970-2c5bc84c43c8/@@download/cross_correlation_plot/ENCFF411MHCENCFF882JGY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB757CPM bradley-bernstein:DNA_Lib 6495 "ENCFF411MHC,ENCFF882JGY" HiSeq 2500 2016-08-09T16:54:00.710941+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV5Vj0369G0925gv2xQK81 ENCSR729ENO https://www.encodeproject.org/experiments/ENCSR729ENO "histone,histone modification,narrow histone mark" H3K27ac-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF259MDS https://www.encodeproject.org/files/ENCFF259MDS/@@download/ENCFF259MDS.bam ENCFF537DEY https://www.encodeproject.org/files/ENCFF537DEY/@@download/ENCFF537DEY.bam 68.9 M 0 66.9 M 0.972 PE 76 76 native 29.9 M 0.0 M 28.4 M 0.826 0.95 0.95 20.14 175 1.14 3.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f5376ac-6c78-4d7e-8ca9-df2acae17927/@@download/cross_correlation_plot/ENCFF114PLSENCFF479VFS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB989UDY bradley-bernstein:DNA_Lib 6368 "ENCFF479VFS,ENCFF114PLS" HiSeq 2500 2016-08-09T16:55:36.081100+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV5Z80369J0Bzfkv2Xyvfq ENCSR386RIJ https://www.encodeproject.org/experiments/ENCSR386RIJ "histone,histone modification,broad histone mark" H3K27me3-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF371CJE https://www.encodeproject.org/files/ENCFF371CJE/@@download/ENCFF371CJE.bam ENCFF188PKL https://www.encodeproject.org/files/ENCFF188PKL/@@download/ENCFF188PKL.bam 41.8 M 0 39.6 M 0.948 SE 76 76 native 0.0 M 33.6 M 27.5 M 0.657 0.84 0.85 6.67 180 1.14 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/16e6077a-170e-4b4b-99bc-40f5b307af56/@@download/cross_correlation_plot/ENCFF729AZK-ENCFF747LRR-ENCFF630ATC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB343CID bradley-bernstein:DNA_Lib 6373 "ENCFF747LRR,ENCFF630ATC,ENCFF729AZK" HiSeq 2500 2017-01-09T21:02:31.390310+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqKYj0369BVx998v4QKX9y ENCSR386RIJ https://www.encodeproject.org/experiments/ENCSR386RIJ "histone,histone modification,broad histone mark" H3K27me3-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF862WYK https://www.encodeproject.org/files/ENCFF862WYK/@@download/ENCFF862WYK.bam ENCFF189HMJ https://www.encodeproject.org/files/ENCFF189HMJ/@@download/ENCFF189HMJ.bam 29.8 M 0 28.4 M 0.954 SE 76 76 native 0.0 M 24.3 M 18.1 M 0.606 0.80 0.81 5.32 195 1.09 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/3de6ce0b-63e1-4823-9f78-eadf6f2971f6/@@download/cross_correlation_plot/ENCFF435CKH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB071VVN bradley-bernstein:DNA_Lib 6538 ENCFF435CKH HiSeq 2000 2017-01-09T21:01:40.215991+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqKkj03691GGYY8qyb0JGX ENCSR236YPE https://www.encodeproject.org/experiments/ENCSR236YPE "histone,histone modification,broad histone mark" H3K36me3-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF763VTM https://www.encodeproject.org/files/ENCFF763VTM/@@download/ENCFF763VTM.bam ENCFF371YFP https://www.encodeproject.org/files/ENCFF371YFP/@@download/ENCFF371YFP.bam 52.2 M 0 50.0 M 0.958 PE 76 76 native 20.2 M 0.0 M 18.3 M 0.700 0.90 0.90 9.92 185 1.11 9.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3a0e719-2df7-46d5-a233-9becc47ae4c5/@@download/cross_correlation_plot/ENCFF483QVHENCFF562IES.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB755YHD bradley-bernstein:DNA_Lib 6370 "ENCFF483QVH,ENCFF562IES" HiSeq 2500 2016-11-07T03:21:52.180551+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJQ700369Fq9ppXVbB983G ENCSR236YPE https://www.encodeproject.org/experiments/ENCSR236YPE "histone,histone modification,broad histone mark" H3K36me3-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF402PGG https://www.encodeproject.org/files/ENCFF402PGG/@@download/ENCFF402PGG.bam ENCFF392LSG https://www.encodeproject.org/files/ENCFF392LSG/@@download/ENCFF392LSG.bam 48.4 M 0 45.5 M 0.939 PE 76 76 native 18.0 M 0.0 M 16.6 M 0.685 0.92 0.92 12.93 200 1.09 13.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/fbd391c4-5275-4dc5-af80-7b2fcd1aec82/@@download/cross_correlation_plot/ENCFF438GQQENCFF857BPJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB757FNZ bradley-bernstein:DNA_Lib 6498 "ENCFF438GQQ,ENCFF857BPJ" HiSeq 2500 2016-11-07T03:22:02.087034+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJQKj03697GFbjV1b4gVZv ENCSR249YGG https://www.encodeproject.org/experiments/ENCSR249YGG "histone,histone modification,broad histone mark" H3K4me1-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF780MUM https://www.encodeproject.org/files/ENCFF780MUM/@@download/ENCFF780MUM.bam ENCFF550JJS https://www.encodeproject.org/files/ENCFF550JJS/@@download/ENCFF550JJS.bam 70.1 M 0 68.6 M 0.979 PE 76 76 native 30.9 M 0.0 M 28.2 M 0.806 0.91 0.91 11.45 180 1.11 4.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d4b41f9-bf29-406a-946c-b9ea8511313f/@@download/cross_correlation_plot/ENCFF254UIEENCFF996RQY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB102RMQ bradley-bernstein:DNA_Lib 6371 "ENCFF996RQY,ENCFF254UIE" HiSeq 2500 2016-11-07T03:24:18.757136+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJQf003698kJz2gxb7gp62 ENCSR249YGG https://www.encodeproject.org/experiments/ENCSR249YGG "histone,histone modification,broad histone mark" H3K4me1-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF961PHH https://www.encodeproject.org/files/ENCFF961PHH/@@download/ENCFF961PHH.bam ENCFF437WEQ https://www.encodeproject.org/files/ENCFF437WEQ/@@download/ENCFF437WEQ.bam 46.7 M 0 44.5 M 0.953 PE 76 76 native 19.5 M 0.0 M 15.4 M 0.660 0.79 0.79 4.53 200 1.12 3.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc22d6a0-602f-4fbc-b937-23b8692a27d4/@@download/cross_correlation_plot/ENCFF539QLWENCFF888VAF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB674TUZ bradley-bernstein:DNA_Lib 6499 "ENCFF539QLW,ENCFF888VAF" HiSeq 2500 2016-11-07T03:21:35.426915+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJQpQ03696QVKGb5b181zJ ENCSR740FYN https://www.encodeproject.org/experiments/ENCSR740FYN "histone,histone modification,narrow histone mark" H3K4me2-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF913IFO https://www.encodeproject.org/files/ENCFF913IFO/@@download/ENCFF913IFO.bam ENCFF603QKS https://www.encodeproject.org/files/ENCFF603QKS/@@download/ENCFF603QKS.bam 35.6 M 0 33.9 M 0.952 SE 76 76 native 0.0 M 30.8 M 28.6 M 0.805 0.94 0.94 17.15 185 1.10 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/51ff5bda-6806-4ff9-9e4c-421a7b6bf3cf/@@download/cross_correlation_plot/ENCFF999PYV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB398XWR bradley-bernstein:DNA_Lib 6363 ENCFF999PYV HiSeq 2500 2017-01-09T21:07:06.324937+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqP0003692JY2V78v4y12k ENCSR740FYN https://www.encodeproject.org/experiments/ENCSR740FYN "histone,histone modification,narrow histone mark" H3K4me2-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF384SDB https://www.encodeproject.org/files/ENCFF384SDB/@@download/ENCFF384SDB.bam ENCFF751RCT https://www.encodeproject.org/files/ENCFF751RCT/@@download/ENCFF751RCT.bam 32.4 M 0 31.4 M 0.968 SE 76 76 native 0.0 M 28.9 M 27.4 M 0.845 0.95 0.95 19.38 215 1.15 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/b741b311-e60e-467a-9369-7ba51c7bd88f/@@download/cross_correlation_plot/ENCFF497UDN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB463KXQ bradley-bernstein:DNA_Lib 5879 ENCFF497UDN HiSeq 2500 2017-01-09T18:32:37.378757+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqPB00369Gy3543YZ1jZy2 ENCSR657DYL https://www.encodeproject.org/experiments/ENCSR657DYL "histone,histone modification,narrow histone mark" H3K4me3-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF346EPG https://www.encodeproject.org/files/ENCFF346EPG/@@download/ENCFF346EPG.bam ENCFF772WVZ https://www.encodeproject.org/files/ENCFF772WVZ/@@download/ENCFF772WVZ.bam 33.6 M 0 31.2 M 0.931 SE 76 76 native 0.0 M 25.7 M 23.1 M 0.689 0.92 0.92 13.11 190 1.22 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ca511b0-7515-44ae-8c50-d1effd25a8e7/@@download/cross_correlation_plot/ENCFF121NZR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB770UYZ bradley-bernstein:DNA_Lib 6369 ENCFF121NZR HiSeq 2500 2017-01-09T19:43:46.197643+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqK2Q03695zYbz0bgXPg3K ENCSR657DYL https://www.encodeproject.org/experiments/ENCSR657DYL "histone,histone modification,narrow histone mark" H3K4me3-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF850PUL https://www.encodeproject.org/files/ENCFF850PUL/@@download/ENCFF850PUL.bam ENCFF303OZS https://www.encodeproject.org/files/ENCFF303OZS/@@download/ENCFF303OZS.bam 39.8 M 0 37.9 M 0.952 SE 76 76 native 0.0 M 33.7 M 30.6 M 0.768 0.91 0.91 12.25 235 1.42 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/f53ed8a4-40be-461e-92e4-a31120cce0e2/@@download/cross_correlation_plot/ENCFF279LHW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB160QBL bradley-bernstein:DNA_Lib 5880 ENCFF279LHW HiSeq 2000 2016-11-14T05:18:40.672115+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqKB803696XBx58qK9xG37 ENCSR154HDX https://www.encodeproject.org/experiments/ENCSR154HDX "histone,histone modification,broad histone mark" H3K79me2-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF263XBT https://www.encodeproject.org/files/ENCFF263XBT/@@download/ENCFF263XBT.bam ENCFF222FUD https://www.encodeproject.org/files/ENCFF222FUD/@@download/ENCFF222FUD.bam 51.1 M 0 49.7 M 0.972 PE 76 76 native 21.9 M 0.0 M 21.0 M 0.820 0.96 0.96 22.36 190 1.12 4.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/f55b250a-c297-4e6e-a880-7be8111b015b/@@download/cross_correlation_plot/ENCFF106OGEENCFF796UTK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB916GVQ bradley-bernstein:DNA_Lib 6365 "ENCFF106OGE,ENCFF796UTK" HiSeq 2500 2016-11-07T03:21:43.732311+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJXv803696QVKGb5b18212 ENCSR154HDX https://www.encodeproject.org/experiments/ENCSR154HDX "histone,histone modification,broad histone mark" H3K79me2-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF531WSU https://www.encodeproject.org/files/ENCFF531WSU/@@download/ENCFF531WSU.bam ENCFF736IWW https://www.encodeproject.org/files/ENCFF736IWW/@@download/ENCFF736IWW.bam 53.1 M 0 50.9 M 0.958 PE 76 76 native 22.0 M 0.0 M 19.6 M 0.740 0.89 0.89 9.12 190 1.11 2.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/958b5f1e-7af5-45ec-81d5-f8c92c7a20bc/@@download/cross_correlation_plot/ENCFF124JCHENCFF584HTW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB098CZE bradley-bernstein:DNA_Lib 6503 "ENCFF584HTW,ENCFF124JCH" HiSeq 2500 2016-11-07T03:21:40.036656+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJY180369F4g82fJbGXYBX ENCSR550UQS https://www.encodeproject.org/experiments/ENCSR550UQS "histone,histone modification,narrow histone mark" H3K9ac-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF156MJA https://www.encodeproject.org/files/ENCFF156MJA/@@download/ENCFF156MJA.bam ENCFF602YIT https://www.encodeproject.org/files/ENCFF602YIT/@@download/ENCFF602YIT.bam 98.9 M 0 94.4 M 0.954 PE 76 76 native 40.4 M 0.0 M 34.8 M 0.704 0.86 0.86 7.02 175 1.14 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/e88476bf-01bc-49d7-b2f2-16b06855851d/@@download/cross_correlation_plot/ENCFF570STMENCFF625KCX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB527JMQ bradley-bernstein:DNA_Lib 6372 "ENCFF570STM,ENCFF625KCX" HiSeq 2500 2016-11-07T03:28:23.606027+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJXV803696QVKGb5b1820j ENCSR550UQS https://www.encodeproject.org/experiments/ENCSR550UQS "histone,histone modification,narrow histone mark" H3K9ac-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF031USU https://www.encodeproject.org/files/ENCFF031USU/@@download/ENCFF031USU.bam ENCFF950JCL https://www.encodeproject.org/files/ENCFF950JCL/@@download/ENCFF950JCL.bam 50.3 M 0 48.2 M 0.958 PE 76 76 native 20.9 M 0.0 M 19.9 M 0.791 0.95 0.95 20.19 190 1.14 3.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2be5f27-8f67-4a3f-ba8b-129c9e7d98b1/@@download/cross_correlation_plot/ENCFF110AOOENCFF748UMR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB439TDL bradley-bernstein:DNA_Lib 6504 "ENCFF748UMR,ENCFF110AOO" HiSeq 2500 2016-11-07T03:22:19.640440+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJXfQ0369PfgzVybk1yFZP ENCSR700VCN https://www.encodeproject.org/experiments/ENCSR700VCN "histone,histone modification,broad histone mark" H3K9me2-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF862DHH https://www.encodeproject.org/files/ENCFF862DHH/@@download/ENCFF862DHH.bam ENCFF891WQC https://www.encodeproject.org/files/ENCFF891WQC/@@download/ENCFF891WQC.bam 55.3 M 0 52.5 M 0.950 PE 76 76 native 21.9 M 0.0 M 21.3 M 0.769 0.97 0.97 33.40 165 1.09 10.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecdd402d-760f-45ea-ba36-2701841c114d/@@download/cross_correlation_plot/ENCFF357JUHENCFF577YLB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB483PCH bradley-bernstein:DNA_Lib 6512 "ENCFF357JUH,ENCFF577YLB" HiSeq 2500 2016-11-07T03:22:09.046914+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJVv8036911ffQk1b9pX6Z ENCSR700VCN https://www.encodeproject.org/experiments/ENCSR700VCN "histone,histone modification,broad histone mark" H3K9me2-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF473ZTX https://www.encodeproject.org/files/ENCFF473ZTX/@@download/ENCFF473ZTX.bam ENCFF891JUF https://www.encodeproject.org/files/ENCFF891JUF/@@download/ENCFF891JUF.bam 72.9 M 0 69.1 M 0.948 PE 76 76 native 28.7 M 0.0 M 27.8 M 0.763 0.97 0.97 29.59 165 1.07 10.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/574dcf30-4609-47b6-9105-a1094f749877/@@download/cross_correlation_plot/ENCFF958SNVENCFF899ZOG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB073AQU bradley-bernstein:DNA_Lib 6513 "ENCFF958SNV,ENCFF899ZOG" HiSeq 2500 2016-11-07T03:23:16.309114+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJX0Q03698kJz2gxb7gp6P ENCSR221CWL https://www.encodeproject.org/experiments/ENCSR221CWL "histone,histone modification,broad histone mark" H3K9me3-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF804BIN https://www.encodeproject.org/files/ENCFF804BIN/@@download/ENCFF804BIN.bam ENCFF810HQX https://www.encodeproject.org/files/ENCFF810HQX/@@download/ENCFF810HQX.bam 64.3 M 0 57.5 M 0.893 SE 76 76 native 0.0 M 38.4 M 34.0 M 0.528 0.89 0.91 10.73 195 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/b902ba34-fe3a-48d3-b98b-1a35fdb51a15/@@download/cross_correlation_plot/ENCFF223MPF-ENCFF220RNL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB176OAI bradley-bernstein:DNA_Lib 6505 "ENCFF223MPF,ENCFF220RNL" HiSeq 2500 2017-01-09T22:45:50.342685+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqQ5003695xjbF7B3vx4zx ENCSR221CWL https://www.encodeproject.org/experiments/ENCSR221CWL "histone,histone modification,broad histone mark" H3K9me3-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF597FMM https://www.encodeproject.org/files/ENCFF597FMM/@@download/ENCFF597FMM.bam ENCFF371PHA https://www.encodeproject.org/files/ENCFF371PHA/@@download/ENCFF371PHA.bam 44.5 M 0 41.1 M 0.924 SE 76 76 native 0.0 M 28.1 M 23.4 M 0.525 0.83 0.84 6.00 190 1.03 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5fbbb4b-1fa7-4130-9396-cc7f957be92d/@@download/cross_correlation_plot/ENCFF387CVH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB629RUQ bradley-bernstein:DNA_Lib 5882 ENCFF387CVH HiSeq 2500 2016-12-14T23:02:19.024282+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqQJ803692JY2V78v4y13Z ENCSR293NAJ https://www.encodeproject.org/experiments/ENCSR293NAJ "histone,histone modification,broad histone mark" H4K20me1-human induced pluripotent stem cell induced pluripotent stem cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF136SGF https://www.encodeproject.org/files/ENCFF136SGF/@@download/ENCFF136SGF.bam ENCFF772LMP https://www.encodeproject.org/files/ENCFF772LMP/@@download/ENCFF772LMP.bam 67.3 M 0 65.2 M 0.969 PE 76 76 native 28.6 M 0.0 M 26.9 M 0.800 0.94 0.94 16.82 175 1.07 24.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/1015fdc0-0f4a-4fa9-9fbe-1d3c5cb787ef/@@download/cross_correlation_plot/ENCFF796DBWENCFF443PGB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB125FMJ bradley-bernstein:DNA_Lib 6367 "ENCFF443PGB,ENCFF796DBW" HiSeq 2500 2016-11-07T03:22:39.873662+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJVX803696QVKGb5b18202 ENCSR293NAJ https://www.encodeproject.org/experiments/ENCSR293NAJ "histone,histone modification,broad histone mark" H4K20me1-human induced pluripotent stem cell induced pluripotent stem cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF056ZDT https://www.encodeproject.org/files/ENCFF056ZDT/@@download/ENCFF056ZDT.bam ENCFF871QBG https://www.encodeproject.org/files/ENCFF871QBG/@@download/ENCFF871QBG.bam 46.6 M 0 44.7 M 0.961 PE 76 76 native 19.3 M 0.0 M 15.8 M 0.677 0.82 0.81 5.18 180 1.10 17.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba7110e5-755d-4c42-9855-6428a9f806ca/@@download/cross_correlation_plot/ENCFF975QLRENCFF428DCK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB562PGD bradley-bernstein:DNA_Lib 6502 "ENCFF428DCK,ENCFF975QLR" HiSeq 2500 2016-11-07T03:21:50.433709+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJVg0036954FbBZ1bGf40f ENCSR583ACG https://www.encodeproject.org/experiments/ENCSR583ACG "transcription factor,chromatin remodeller" BRD4-human K562 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF652HPU https://www.encodeproject.org/files/ENCFF652HPU/@@download/ENCFF652HPU.bam ENCFF846NAU https://www.encodeproject.org/files/ENCFF846NAU/@@download/ENCFF846NAU.bam 36.4 M 0 35.9 M 0.986 SE 76 36 36 0.0 M 26.4 M 25.4 M 0.699 0.96 0.96 27.92 195 1.02 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/dca52d9c-807b-4928-8492-d3910d3ec8cd/@@download/cross_correlation_plot/ENCFF335PHG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB207AST bradley-bernstein:DNA_Lib 6871 ENCFF335PHG HiSeq 2500 2016-11-25T20:39:45.189091+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyZ3803692FXJff1QzKvb4 ENCSR583ACG https://www.encodeproject.org/experiments/ENCSR583ACG "transcription factor,chromatin remodeller" BRD4-human K562 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF860JBC https://www.encodeproject.org/files/ENCFF860JBC/@@download/ENCFF860JBC.bam ENCFF341TKS https://www.encodeproject.org/files/ENCFF341TKS/@@download/ENCFF341TKS.bam 38.3 M 0 36.4 M 0.950 SE 76 36 36 0.0 M 27.1 M 25.5 M 0.667 0.95 0.95 18.21 185 1.03 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/77738c89-800d-402c-9b3f-67966c53262f/@@download/cross_correlation_plot/ENCFF049ACQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB875TFE bradley-bernstein:DNA_Lib 7398 ENCFF049ACQ HiSeq 2500 2016-11-26T04:41:37.003690+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vKBx003690qvfxGkZJb1J0 ENCSR000ATU https://www.encodeproject.org/experiments/ENCSR000ATU "transcription factor,chromatin remodeller" CBX2-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF741LEE https://www.encodeproject.org/files/ENCFF741LEE/@@download/ENCFF741LEE.bam ENCFF657GAK https://www.encodeproject.org/files/ENCFF657GAK/@@download/ENCFF657GAK.bam 24.9 M 0 23.7 M 0.952 SE 36 36 native 0.0 M 16.9 M 7.2 M 0.287 0.45 0.45 1.90 245 1.07 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/67b25f07-e0f9-4bf2-872b-45f4b6295a52/@@download/cross_correlation_plot/ENCFF000BVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB198VCW bradley-bernstein:DNA_Lib 786 ENCFF000BVN HiSeq 2000 2016-12-11T04:01:33.652802+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16546Q0369KQ3Yk1yz1kgby ENCSR000ATW https://www.encodeproject.org/experiments/ENCSR000ATW "transcription factor,chromatin remodeller" CBX8-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF781JEI https://www.encodeproject.org/files/ENCFF781JEI/@@download/ENCFF781JEI.bam ENCFF750XGM https://www.encodeproject.org/files/ENCFF750XGM/@@download/ENCFF750XGM.bam 38.3 M 0 32.1 M 0.839 SE 36 36 36 0.0 M 22.3 M 4.5 M 0.117 0.23 0.30 1.78 150 1.19 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ff23fcf-e8a1-479a-b3bc-7e1d4d9890dd/@@download/cross_correlation_plot/ENCFF702MJJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB514VNJ bradley-bernstein:DNA_Lib 779 ENCFF702MJJ HiSeq 2000 2017-02-17T19:01:03.306980+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2YY8V8036993XjJ41xBfkgP ENCSR000ATW https://www.encodeproject.org/experiments/ENCSR000ATW "transcription factor,chromatin remodeller" CBX8-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF954PRL https://www.encodeproject.org/files/ENCFF954PRL/@@download/ENCFF954PRL.bam ENCFF405REH https://www.encodeproject.org/files/ENCFF405REH/@@download/ENCFF405REH.bam 30.2 M 0 28.8 M 0.953 SE 76 36 36 0.0 M 22.2 M 16.1 M 0.534 0.73 0.72 3.50 180 1.06 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d95dc6c-9c12-442b-8a93-3ad518450874/@@download/cross_correlation_plot/ENCFF942JXG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB423PJC bradley-bernstein:DNA_Lib 6096 ENCFF942JXG HiSeq 2000 2017-02-17T19:18:54.853894+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2YY8fj03697ggppGyvXvGq5 ENCSR000AQD https://www.encodeproject.org/experiments/ENCSR000AQD "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF825VEV https://www.encodeproject.org/files/ENCFF825VEV/@@download/ENCFF825VEV.bam ENCFF166HPZ https://www.encodeproject.org/files/ENCFF166HPZ/@@download/ENCFF166HPZ.bam 79.2 M 0 61.5 M 0.776 SE 36 36 native 0.0 M 44.7 M 28.9 M 0.365 0.67 0.75 5.38 95 1.06 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f71476b-28e6-43bf-abed-c6b961a6e7c3/@@download/cross_correlation_plot/ENCFF856DUA-ENCFF577WJZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695AMM,ENCLB695AML" "bradley-bernstein:DNA_Lib 5209,bradley-bernstein:DNA_Lib 5212" "ENCFF577WJZ,ENCFF856DUA" Illumina Genome Analyzer IIx 2017-03-01T18:16:51.370041+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pxVz00369J4x3z5Pq8GXGG ENCSR000ATL https://www.encodeproject.org/experiments/ENCSR000ATL "transcription factor,chromatin remodeller,RNA binding protein" CHD4-human K562 immortalized cell line bradley-bernstein ENCODE2 pending SE "76,36" "HiSeq 2000,HiSeq 2500" unreviewed ENCSR000AVD https://www.encodeproject.org/experiments/ENCSR000AVD "transcription factor,chromatin remodeller,RNA binding protein" CHD7-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF747PIH https://www.encodeproject.org/files/ENCFF747PIH/@@download/ENCFF747PIH.bam ENCFF059QUS https://www.encodeproject.org/files/ENCFF059QUS/@@download/ENCFF059QUS.bam 41.7 M 0 28.4 M 0.681 SE 36 36 native 0.0 M 20.7 M 18.1 M 0.434 0.89 0.89 9.11 90 1.07 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/be0c18d2-eceb-474c-aca4-98886807b9f4/@@download/cross_correlation_plot/ENCFF000BWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATB bradley-bernstein:DNA_Lib 5214 ENCFF000BWJ Illumina Genome Analyzer IIx 2016-12-11T04:08:57.441246+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1654G00369GF0YB1zjPf6qF ENCSR000AKY https://www.encodeproject.org/experiments/ENCSR000AKY control Control-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF392XRJ https://www.encodeproject.org/files/ENCFF392XRJ/@@download/ENCFF392XRJ.bam ENCFF117OYK https://www.encodeproject.org/files/ENCFF117OYK/@@download/ENCFF117OYK.bam 27.6 M 0 21.8 M 0.789 SE 36 36 None 0.0 M 15.7 M 15.2 M 0.552 0.98 0.98 47.47 -5 1.01 0.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a409ad5-69c3-4e98-b65e-d9d828b4b1c1/@@download/cross_correlation_plot/ENCFF000BWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJV ENCFF000BWK Illumina Genome Analyzer IIe 2016-07-13T02:49:59.080872+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z6Jj03693Gpj8BkZvvgqz ENCSR000AKY https://www.encodeproject.org/experiments/ENCSR000AKY control Control-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF829HZY https://www.encodeproject.org/files/ENCFF829HZY/@@download/ENCFF829HZY.bam ENCFF296OHW https://www.encodeproject.org/files/ENCFF296OHW/@@download/ENCFF296OHW.bam 20.9 M 0 20.7 M 0.992 SE 36 36 native 0.0 M 16.0 M 15.0 M 0.720 0.94 0.94 17.06 155 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1f9733c-6b35-4366-acf1-a4c5651d8f53/@@download/cross_correlation_plot/ENCFF283HQV-ENCFF994FIB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB971INW bradley-bernstein:DNA_Lib 5971 "ENCFF283HQV,ENCFF994FIB" HiSeq 2500 2016-11-01T21:09:03.964787+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GJ9100369FZFXY30Q310bP ENCSR000AKY https://www.encodeproject.org/experiments/ENCSR000AKY control Control-human K562 immortalized cell line 3 bradley-bernstein ENCODE2 GRCh38 ENCFF893MMO https://www.encodeproject.org/files/ENCFF893MMO/@@download/ENCFF893MMO.bam ENCFF019ENS https://www.encodeproject.org/files/ENCFF019ENS/@@download/ENCFF019ENS.bam 31.1 M 0 29.8 M 0.960 SE 36 36 native 0.0 M 22.3 M 21.7 M 0.699 0.98 0.98 47.84 0 1.01 0.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/33373c14-f00b-481e-9dd4-7adf836ee32d/@@download/cross_correlation_plot/ENCFF561WFK-ENCFF156ECZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB915JNJ bradley-bernstein:DNA_Lib 6491 "ENCFF156ECZ,ENCFF561WFK" HiSeq 2500 2017-03-13T18:52:50.133104+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F33Ggyj036969kxG6ZVB9vyx ENCSR000AKO https://www.encodeproject.org/experiments/ENCSR000AKO "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF871GXE https://www.encodeproject.org/files/ENCFF871GXE/@@download/ENCFF871GXE.bam ENCFF477OGN https://www.encodeproject.org/files/ENCFF477OGN/@@download/ENCFF477OGN.bam 19.7 M 0 12.4 M 0.633 SE 36 36 36 0.0 M 8.3 M 6.9 M 0.350 0.86 0.86 7.29 180 2.86 3.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/571632cb-9cb6-43a9-9209-0efd6709ad6f/@@download/cross_correlation_plot/ENCFF000BWM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADN ENCFF000BWM Illumina Genome Analyzer IIx 2016-08-05T20:42:27.098494+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVp9k00369FPYpbpZGPVBPf ENCSR000AKO https://www.encodeproject.org/experiments/ENCSR000AKO "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF550BMQ https://www.encodeproject.org/files/ENCFF550BMQ/@@download/ENCFF550BMQ.bam ENCFF156TWN https://www.encodeproject.org/files/ENCFF156TWN/@@download/ENCFF156TWN.bam 16.4 M 0 13.2 M 0.802 SE 51 36 36 0.0 M 9.9 M 8.5 M 0.519 0.86 0.87 7.51 220 2.87 2.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/b780fb83-8e57-4e72-9a4e-be05c023bc43/@@download/cross_correlation_plot/ENCFF000BWR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADO ENCFF000BWR Illumina Genome Analyzer IIe 2016-08-05T20:42:09.637719+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVp9vQ036985Bx4K9zQZ2vB ENCSR113WGK https://www.encodeproject.org/experiments/ENCSR113WGK "transcription factor,chromatin remodeller" EHMT2-human K562 immortalized cell line bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 processing ENCSR000AQB https://www.encodeproject.org/experiments/ENCSR000AQB transcription factor EP300-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF159BZL https://www.encodeproject.org/files/ENCFF159BZL/@@download/ENCFF159BZL.bam ENCFF643QMN https://www.encodeproject.org/files/ENCFF643QMN/@@download/ENCFF643QMN.bam 40.0 M 0 35.6 M 0.891 SE 36 36 native 0.0 M 26.4 M 19.1 M 0.478 0.73 0.73 3.53 90 1.08 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/0383b696-1303-443c-a9a1-336f701513e1/@@download/cross_correlation_plot/ENCFF000CAS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARU ENCFF000CAS Illumina Genome Analyzer 2016-12-11T04:39:55.920598+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165g3j03697xKX68qyy2kV6 ENCSR000AQB https://www.encodeproject.org/experiments/ENCSR000AQB transcription factor EP300-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF230WAW https://www.encodeproject.org/files/ENCFF230WAW/@@download/ENCFF230WAW.bam ENCFF638EPF https://www.encodeproject.org/files/ENCFF638EPF/@@download/ENCFF638EPF.bam 85.8 M 0 81.9 M 0.955 SE 36 36 native 0.0 M 61.6 M 57.8 M 0.674 0.94 0.94 18.10 185 1.01 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/e973c2fd-cf37-4c3a-ac64-7dd34233bd13/@@download/cross_correlation_plot/ENCFF000CAZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARV ENCFF000CAZ Illumina Genome Analyzer 2016-12-11T06:23:54.902984+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165g8j03692yykb1zBpz7zJ ENCSR000AQE https://www.encodeproject.org/experiments/ENCSR000AQE "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF678EGD https://www.encodeproject.org/files/ENCFF678EGD/@@download/ENCFF678EGD.bam ENCFF495WQM https://www.encodeproject.org/files/ENCFF495WQM/@@download/ENCFF495WQM.bam 50.9 M 0 46.2 M 0.908 SE 36 36 native 0.0 M 35.2 M 33.5 M 0.659 0.95 0.95 21.70 115 1.02 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f2abe0b-2144-44ba-a912-9943317ce9bc/@@download/cross_correlation_plot/ENCFF000BWQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASE ENCFF000BWQ Illumina Genome Analyzer 2016-12-11T04:49:10.321551+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165fk00369KbxV61z4GFvfy ENCSR000AQE https://www.encodeproject.org/experiments/ENCSR000AQE "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF912PNB https://www.encodeproject.org/files/ENCFF912PNB/@@download/ENCFF912PNB.bam ENCFF772XOJ https://www.encodeproject.org/files/ENCFF772XOJ/@@download/ENCFF772XOJ.bam 32.2 M 0 26.2 M 0.813 SE 36 36 native 0.0 M 20.6 M 17.7 M 0.549 0.86 0.86 7.07 160 1.05 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/2222f9e6-4b36-4dc5-a047-0105233c5a95/@@download/cross_correlation_plot/ENCFF000BWS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASM ENCFF000BWS Illumina Genome Analyzer IIx 2016-12-11T04:37:09.226103+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165fy00369PvYp91zK1PxZz ENCSR000APC https://www.encodeproject.org/experiments/ENCSR000APC "histone,histone modification,narrow histone mark" H2AFZ-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF472XNE https://www.encodeproject.org/files/ENCFF472XNE/@@download/ENCFF472XNE.bam ENCFF385HED https://www.encodeproject.org/files/ENCFF385HED/@@download/ENCFF385HED.bam 26.8 M 0 24.3 M 0.907 SE 36 36 36 0.0 M 19.0 M 17.5 M 0.651 0.93 0.93 14.25 140 1.22 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/cdcb3deb-8cc1-455a-9749-83495f06fe23/@@download/cross_correlation_plot/ENCFF000BWU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANG ENCFF000BWU Illumina Genome Analyzer IIx 2016-11-05T17:38:43.945423+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk3y00369P6G90pZB0zygJ ENCSR000APC https://www.encodeproject.org/experiments/ENCSR000APC "histone,histone modification,narrow histone mark" H2AFZ-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF407AUC https://www.encodeproject.org/files/ENCFF407AUC/@@download/ENCFF407AUC.bam ENCFF689IQT https://www.encodeproject.org/files/ENCFF689IQT/@@download/ENCFF689IQT.bam 22.9 M 0 20.0 M 0.875 SE 36 36 36 0.0 M 15.7 M 14.7 M 0.645 0.94 0.94 17.12 145 1.30 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/7b39b94a-fd27-4922-9250-f16cece1d657/@@download/cross_correlation_plot/ENCFF000BWV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANH ENCFF000BWV Illumina Genome Analyzer IIx 2016-11-05T17:38:53.780448+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk44803699P6PYx8BPxQQj ENCSR000AKP https://www.encodeproject.org/experiments/ENCSR000AKP "histone,histone modification,narrow histone mark" H3K27ac-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF301TVL https://www.encodeproject.org/files/ENCFF301TVL/@@download/ENCFF301TVL.bam ENCFF465RQO https://www.encodeproject.org/files/ENCFF465RQO/@@download/ENCFF465RQO.bam 23.5 M 0 16.2 M 0.690 SE 36 None 0.0 M 11.4 M 9.8 M 0.415 0.86 0.87 8.55 160 1.92 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc59b351-5511-49eb-9239-3172355f2f5b/@@download/cross_correlation_plot/ENCFF000BXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJE ENCFF000BXH Illumina Genome Analyzer II 2016-07-28T00:31:55.078699+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYb8803697GbqkgJGPb7pf ENCSR000AKP https://www.encodeproject.org/experiments/ENCSR000AKP "histone,histone modification,narrow histone mark" H3K27ac-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF879BWC https://www.encodeproject.org/files/ENCFF879BWC/@@download/ENCFF879BWC.bam ENCFF755BDE https://www.encodeproject.org/files/ENCFF755BDE/@@download/ENCFF755BDE.bam 15.0 M 0 8.1 M 0.539 SE 36 None 0.0 M 5.5 M 4.3 M 0.284 0.78 0.75 3.26 165 1.67 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f2ce0a7-c52f-4445-936f-3dbeb194ee64/@@download/cross_correlation_plot/ENCFF000BXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AJD ENCFF000BXG Illumina Genome Analyzer IIe 2016-07-28T00:31:19.278692+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYbB80369560KGjVGKJbvf ENCSR000AKQ https://www.encodeproject.org/experiments/ENCSR000AKQ "histone,histone modification,broad histone mark" H3K27me3-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF190OWE https://www.encodeproject.org/files/ENCFF190OWE/@@download/ENCFF190OWE.bam ENCFF485SVF https://www.encodeproject.org/files/ENCFF485SVF/@@download/ENCFF485SVF.bam 19.3 M 0 12.9 M 0.670 SE 51 36 36 0.0 M 9.0 M 8.6 M 0.443 0.96 0.96 22.94 150 1.03 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/8187921b-4b71-412b-8e87-6d1a796826e9/@@download/cross_correlation_plot/ENCFF000BXP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMA ENCFF000BXP Illumina Genome Analyzer IIe 2016-08-05T20:41:28.543265+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVp9yj03692QxPxQ9zV3JyK ENCSR000AKQ https://www.encodeproject.org/experiments/ENCSR000AKQ "histone,histone modification,broad histone mark" H3K27me3-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF692KQZ https://www.encodeproject.org/files/ENCFF692KQZ/@@download/ENCFF692KQZ.bam ENCFF469XGO https://www.encodeproject.org/files/ENCFF469XGO/@@download/ENCFF469XGO.bam 22.8 M 0 13.0 M 0.569 SE 36 36 36 0.0 M 8.7 M 6.4 M 0.279 0.74 0.75 4.04 125 1.15 2.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/f388e53f-4ff3-4d16-93e5-2cae0c3b5f86/@@download/cross_correlation_plot/ENCFF000BXN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALZ ENCFF000BXN Illumina Genome Analyzer IIe 2016-08-05T20:41:37.382147+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVpB0j0369427x1V9zy45k8 ENCSR000AKR https://www.encodeproject.org/experiments/ENCSR000AKR "histone,histone modification,broad histone mark" H3K36me3-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF639PLN https://www.encodeproject.org/files/ENCFF639PLN/@@download/ENCFF639PLN.bam ENCFF431HAA https://www.encodeproject.org/files/ENCFF431HAA/@@download/ENCFF431HAA.bam 27.0 M 0 14.0 M 0.520 SE 36 36 36 0.0 M 8.8 M 8.3 M 0.307 0.95 0.96 22.70 165 1.07 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/d585415f-c7f9-4c0e-af90-c5fd83582b0d/@@download/cross_correlation_plot/ENCFF000BXR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMC ENCFF000BXR Illumina Genome Analyzer IIx 2016-11-05T17:37:36.726708+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk7vQ03693Yx5pkGB3y925 ENCSR000AKR https://www.encodeproject.org/experiments/ENCSR000AKR "histone,histone modification,broad histone mark" H3K36me3-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF673KBG https://www.encodeproject.org/files/ENCFF673KBG/@@download/ENCFF673KBG.bam ENCFF683TNV https://www.encodeproject.org/files/ENCFF683TNV/@@download/ENCFF683TNV.bam 17.5 M 0 10.0 M 0.572 SE 36 36 36 0.0 M 6.8 M 5.4 M 0.310 0.80 0.76 3.41 155 1.05 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/d4185ce5-3025-4704-a52c-cfb98d1f027c/@@download/cross_correlation_plot/ENCFF000BXO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMD ENCFF000BXO Illumina Genome Analyzer IIe 2016-11-05T17:37:25.593422+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk80Q03697bbG5kk861zX0 ENCSR000AKS https://www.encodeproject.org/experiments/ENCSR000AKS "histone,histone modification,broad histone mark" H3K4me1-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF778EZR https://www.encodeproject.org/files/ENCFF778EZR/@@download/ENCFF778EZR.bam ENCFF352XJQ https://www.encodeproject.org/files/ENCFF352XJQ/@@download/ENCFF352XJQ.bam 36.9 M 0 13.8 M 0.373 SE 36 36 0.0 M 8.1 M 7.8 M 0.212 0.97 0.97 37.70 155 1.23 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/61446e67-4acd-4854-b0d0-83ae56f9ca2d/@@download/cross_correlation_plot/ENCFF000BXX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOH ENCFF000BXX Illumina Genome Analyzer IIx 2016-08-05T20:42:22.455901+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3jgv7Q0369G6qy42fxbX1KV ENCSR000AKS https://www.encodeproject.org/experiments/ENCSR000AKS "histone,histone modification,broad histone mark" H3K4me1-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF580LGK https://www.encodeproject.org/files/ENCFF580LGK/@@download/ENCFF580LGK.bam ENCFF130RCQ https://www.encodeproject.org/files/ENCFF130RCQ/@@download/ENCFF130RCQ.bam 17.8 M 0 11.1 M 0.624 SE 51 36 0.0 M 7.7 M 7.4 M 0.416 0.96 0.96 27.36 205 1.12 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ce7f53e-a4a3-42fc-9524-29baea183025/@@download/cross_correlation_plot/ENCFF000BYG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APC ENCFF000BYG Illumina Genome Analyzer IIe 2016-08-05T20:41:20.454723+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3jgvJj03692KpX62fQ4By3p ENCSR000AKT https://www.encodeproject.org/experiments/ENCSR000AKT "histone,histone modification,narrow histone mark" H3K4me2-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF010SKB https://www.encodeproject.org/files/ENCFF010SKB/@@download/ENCFF010SKB.bam ENCFF500CHD https://www.encodeproject.org/files/ENCFF500CHD/@@download/ENCFF500CHD.bam 16.0 M 0 12.6 M 0.784 SE 36 36 36 0.0 M 9.3 M 8.6 M 0.537 0.94 0.94 18.30 155 1.84 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ee91532-7ac0-418b-b0cb-4df123f6f1c1/@@download/cross_correlation_plot/ENCFF000BYA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGC ENCFF000BYA Illumina Genome Analyzer IIx 2016-11-05T17:37:10.142005+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk85j03699P6PYx8BPxQY1 ENCSR000AKT https://www.encodeproject.org/experiments/ENCSR000AKT "histone,histone modification,narrow histone mark" H3K4me2-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF773VGC https://www.encodeproject.org/files/ENCFF773VGC/@@download/ENCFF773VGC.bam ENCFF319NDD https://www.encodeproject.org/files/ENCFF319NDD/@@download/ENCFF319NDD.bam 18.1 M 0 9.7 M 0.537 SE 51 36 36 0.0 M 6.6 M 6.2 M 0.342 0.95 0.95 18.74 175 1.52 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/dce977ce-c5a6-4d5b-a2b0-2e6288322955/@@download/cross_correlation_plot/ENCFF000BYF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGB ENCFF000BYF Illumina Genome Analyzer IIe 2016-11-05T17:37:12.283644+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk8B00369P6G90pZB0zykb ENCSR000AKU https://www.encodeproject.org/experiments/ENCSR000AKU "histone,histone modification,narrow histone mark" H3K4me3-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF633WWH https://www.encodeproject.org/files/ENCFF633WWH/@@download/ENCFF633WWH.bam ENCFF100UHB https://www.encodeproject.org/files/ENCFF100UHB/@@download/ENCFF100UHB.bam 14.8 M 0 9.8 M 0.664 SE 51 36 36 0.0 M 6.9 M 6.3 M 0.425 0.92 0.92 12.22 195 1.40 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a7c30b7-0ed5-4166-bff6-52cee8443237/@@download/cross_correlation_plot/ENCFF000BYJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANE ENCFF000BYJ Illumina Genome Analyzer IIe 2016-08-05T20:41:07.652384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2qQk68036933fj85pZ4201G ENCSR000AKU https://www.encodeproject.org/experiments/ENCSR000AKU "histone,histone modification,narrow histone mark" H3K4me3-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF777LZD https://www.encodeproject.org/files/ENCFF777LZD/@@download/ENCFF777LZD.bam ENCFF197VMR https://www.encodeproject.org/files/ENCFF197VMR/@@download/ENCFF197VMR.bam 25.3 M 0 16.2 M 0.639 SE 51 36 36 0.0 M 11.9 M 10.6 M 0.419 0.89 0.89 9.10 160 1.32 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ed7630a-5520-4a8f-b1db-e6aabdaef1c4/@@download/cross_correlation_plot/ENCFF000BYI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AND ENCFF000BYI Illumina Genome Analyzer IIe 2016-08-05T20:41:31.722134+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2qQkFj036987Fbq5pKJX8zv ENCSR668LDD https://www.encodeproject.org/experiments/ENCSR668LDD "histone,histone modification,narrow histone mark" H3K4me3-human K562 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF236SNL https://www.encodeproject.org/files/ENCFF236SNL/@@download/ENCFF236SNL.bam ENCFF189RDG https://www.encodeproject.org/files/ENCFF189RDG/@@download/ENCFF189RDG.bam 38.2 M 0 37.4 M 0.980 SE 76 36 36 0.0 M 29.8 M 26.6 M 0.697 0.89 0.90 10.69 220 1.46 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/86f744f7-c5c2-44f1-b9d0-3a806aa3c217/@@download/cross_correlation_plot/ENCFF894KBP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB184SXU bradley-bernstein:DNA_Lib 5587 ENCFF894KBP HiSeq 2500 2016-08-09T23:07:43.773182+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KV45j0369B8pxyPG3K2B17 ENCSR668LDD https://www.encodeproject.org/experiments/ENCSR668LDD "histone,histone modification,narrow histone mark" H3K4me3-human K562 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF661UGK https://www.encodeproject.org/files/ENCFF661UGK/@@download/ENCFF661UGK.bam ENCFF051QSU https://www.encodeproject.org/files/ENCFF051QSU/@@download/ENCFF051QSU.bam 35.5 M 0 35.0 M 0.987 SE 76 36 36 0.0 M 28.1 M 25.3 M 0.712 0.90 0.91 12.04 220 1.50 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d566819-5dd4-489a-bb5a-4250aafddb42/@@download/cross_correlation_plot/ENCFF010SAE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB104IWE bradley-bernstein:DNA_Lib 5588 ENCFF010SAE HiSeq 2500 2016-08-09T23:07:26.522829+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KV4Kj0369349Kqpx8PZX6Y ENCSR000APD https://www.encodeproject.org/experiments/ENCSR000APD "histone,histone modification,broad histone mark" H3K79me2-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF947DVY https://www.encodeproject.org/files/ENCFF947DVY/@@download/ENCFF947DVY.bam ENCFF234TFF https://www.encodeproject.org/files/ENCFF234TFF/@@download/ENCFF234TFF.bam 31.7 M 0 26.2 M 0.827 SE 36 36 36 0.0 M 20.4 M 19.0 M 0.599 0.94 0.94 16.77 135 1.19 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/6373e0c2-d7ae-4144-b5f8-ecfd09b05269/@@download/cross_correlation_plot/ENCFF000BYO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHH ENCFF000BYO Illumina Genome Analyzer IIx 2016-11-05T17:37:03.756427+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkKFQ0369B9XVbg4B76BFv ENCSR000APD https://www.encodeproject.org/experiments/ENCSR000APD "histone,histone modification,broad histone mark" H3K79me2-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF408YHI https://www.encodeproject.org/files/ENCFF408YHI/@@download/ENCFF408YHI.bam ENCFF870UJC https://www.encodeproject.org/files/ENCFF870UJC/@@download/ENCFF870UJC.bam 21.2 M 0 15.9 M 0.746 SE 36 36 36 0.0 M 12.4 M 11.5 M 0.540 0.93 0.93 14.42 140 1.21 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5761bab-b8a8-4d8f-8ec2-39c1713d0fbe/@@download/cross_correlation_plot/ENCFF000BYS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHI ENCFF000BYS Illumina Genome Analyzer IIx 2016-11-05T17:36:21.832107+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkKQ003696Zj590J8YzYkj ENCSR000AKV https://www.encodeproject.org/experiments/ENCSR000AKV "histone,histone modification,narrow histone mark" H3K9ac-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF698ROL https://www.encodeproject.org/files/ENCFF698ROL/@@download/ENCFF698ROL.bam ENCFF392IMN https://www.encodeproject.org/files/ENCFF392IMN/@@download/ENCFF392IMN.bam 23.5 M 0 17.9 M 0.765 SE 51 36 36 0.0 M 13.4 M 12.3 M 0.526 0.92 0.93 13.74 200 1.55 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f060236-cfbc-491e-8db1-86a0005eda82/@@download/cross_correlation_plot/ENCFF001QWV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASH ENCFF001QWV Illumina Genome Analyzer IIe 2016-11-05T17:34:37.875961+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkZ8Q03697vzB1y0B63VXz ENCSR000AKV https://www.encodeproject.org/experiments/ENCSR000AKV "histone,histone modification,narrow histone mark" H3K9ac-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF103YPC https://www.encodeproject.org/files/ENCFF103YPC/@@download/ENCFF103YPC.bam ENCFF842DDC https://www.encodeproject.org/files/ENCFF842DDC/@@download/ENCFF842DDC.bam 24.6 M 0 13.4 M 0.546 SE 47 36 36 0.0 M 8.3 M 7.2 M 0.295 0.91 0.91 11.35 205 1.37 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/5396edf1-5ef9-4f4d-b311-fdc7601f79d4/@@download/cross_correlation_plot/ENCFF000BYW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASG ENCFF000BYW Illumina Genome Analyzer II 2016-11-05T17:33:56.845117+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkZQ003693Yx5pkGB3y9B8 ENCSR000AKW https://www.encodeproject.org/experiments/ENCSR000AKW "histone,histone modification,broad histone mark" H3K9me1-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF108HZT https://www.encodeproject.org/files/ENCFF108HZT/@@download/ENCFF108HZT.bam ENCFF108OHX https://www.encodeproject.org/files/ENCFF108OHX/@@download/ENCFF108OHX.bam 48.2 M 0 35.9 M 0.744 SE 36 36 native 0.0 M 25.1 M 19.8 M 0.410 0.86 0.86 7.65 200 1.02 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/b0c8ebd0-2276-4dc1-99fd-c6eab80c31b5/@@download/cross_correlation_plot/ENCFF000BYY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADB ENCFF000BYY Illumina Genome Analyzer II 2016-11-11T15:29:16.895841+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgXzj0369986BVPGZ1K1Jv ENCSR000APE https://www.encodeproject.org/experiments/ENCSR000APE "histone,histone modification,broad histone mark" H3K9me3-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF146NLP https://www.encodeproject.org/files/ENCFF146NLP/@@download/ENCFF146NLP.bam ENCFF744MLH https://www.encodeproject.org/files/ENCFF744MLH/@@download/ENCFF744MLH.bam 21.1 M 0 19.2 M 0.908 SE 36 36 36 0.0 M 14.1 M 12.9 M 0.611 0.92 0.92 11.95 130 1.04 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/461a03ea-ab63-40a1-97c2-a590a85bf368/@@download/cross_correlation_plot/ENCFF001QWW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFK ENCFF001QWW Illumina Genome Analyzer IIx 2016-11-05T17:37:41.998732+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk77Q0369B9XVbg4B76B9g ENCSR000APE https://www.encodeproject.org/experiments/ENCSR000APE "histone,histone modification,broad histone mark" H3K9me3-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF559DHZ https://www.encodeproject.org/files/ENCFF559DHZ/@@download/ENCFF559DHZ.bam ENCFF928ZQM https://www.encodeproject.org/files/ENCFF928ZQM/@@download/ENCFF928ZQM.bam 46.2 M 0 41.6 M 0.901 SE 36 36 36 0.0 M 29.0 M 27.9 M 0.604 0.97 0.97 30.65 115 1.02 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/045848a9-8e3d-4cde-ab5e-47566bed9e31/@@download/cross_correlation_plot/ENCFF001QWX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFL ENCFF001QWX Illumina Genome Analyzer IIx 2016-11-05T17:38:40.303107+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk7FQ0369F4g82fJbGXQgK ENCSR000AKX https://www.encodeproject.org/experiments/ENCSR000AKX "histone,histone modification,broad histone mark" H4K20me1-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF080MET https://www.encodeproject.org/files/ENCFF080MET/@@download/ENCFF080MET.bam ENCFF148RID https://www.encodeproject.org/files/ENCFF148RID/@@download/ENCFF148RID.bam 19.7 M 0 13.3 M 0.672 SE 36 36 36 0.0 M 8.8 M 8.2 M 0.417 0.95 0.95 21.56 205 1.03 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1085797-fa28-41d3-97b9-ccbb678f23f0/@@download/cross_correlation_plot/ENCFF000BZJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFB ENCFF000BZJ Illumina Genome Analyzer IIx 2016-11-05T17:37:33.962885+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk7V003696jy9Kv0B4Y6ZJ ENCSR000AKX https://www.encodeproject.org/experiments/ENCSR000AKX "histone,histone modification,broad histone mark" H4K20me1-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF744AZG https://www.encodeproject.org/files/ENCFF744AZG/@@download/ENCFF744AZG.bam ENCFF469FNC https://www.encodeproject.org/files/ENCFF469FNC/@@download/ENCFF469FNC.bam 23.2 M 0 18.3 M 0.788 SE 51 36 36 0.0 M 13.2 M 12.4 M 0.534 0.94 0.94 16.05 185 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7b70098-d169-4e92-89d4-e3053e0c6a8e/@@download/cross_correlation_plot/ENCFF000BZN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFA ENCFF000BZN Illumina Genome Analyzer IIe 2016-11-05T17:37:48.312387+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kk7fQ03693Yx5pkGB3y91q ENCSR000AQF https://www.encodeproject.org/experiments/ENCSR000AQF "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF698XSR https://www.encodeproject.org/files/ENCFF698XSR/@@download/ENCFF698XSR.bam ENCFF832OQS https://www.encodeproject.org/files/ENCFF832OQS/@@download/ENCFF832OQS.bam 50.6 M 0 35.8 M 0.707 SE 36 36 native 0.0 M 25.5 M 17.7 M 0.350 0.73 0.74 3.96 100 1.20 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/b24fee89-f3a7-4333-a3ad-35231346a5e4/@@download/cross_correlation_plot/ENCFF269QCW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATJ bradley-bernstein:DNA_Lib 5218 ENCFF269QCW Illumina Genome Analyzer IIx 2017-03-01T18:16:10.028424+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pvqk00369FfYkf81b2PPKp ENCSR000AQF https://www.encodeproject.org/experiments/ENCSR000AQF "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF619AJU https://www.encodeproject.org/files/ENCFF619AJU/@@download/ENCFF619AJU.bam ENCFF977TIR https://www.encodeproject.org/files/ENCFF977TIR/@@download/ENCFF977TIR.bam 45.1 M 0 30.3 M 0.673 SE 36 36 native 0.0 M 22.4 M 13.6 M 0.302 0.64 0.62 2.50 175 1.09 3.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1290e7c-f4cf-42c0-a897-f47b7234e23b/@@download/cross_correlation_plot/ENCFF594HPD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATK bradley-bernstein:DNA_Lib 5217 ENCFF594HPD Illumina Genome Analyzer IIx 2017-03-01T18:15:52.616362+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pvqzQ036986xZ2KXy7ggY0 ENCSR000AQG https://www.encodeproject.org/experiments/ENCSR000AQG "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF610YXS https://www.encodeproject.org/files/ENCFF610YXS/@@download/ENCFF610YXS.bam ENCFF205EFG https://www.encodeproject.org/files/ENCFF205EFG/@@download/ENCFF205EFG.bam 43.4 M 0 33.7 M 0.776 SE 36 36 native 0.0 M 24.9 M 12.6 M 0.290 0.54 0.54 2.24 105 1.12 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/d5263615-3319-43bc-b257-b748b6363edd/@@download/cross_correlation_plot/ENCFF315OYW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQN bradley-bernstein:DNA_Lib 5221 ENCFF315OYW Illumina Genome Analyzer IIx 2017-02-27T22:48:08.857575+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2p68Fj0369GgbfZ8bxV42Xk ENCSR000AQG https://www.encodeproject.org/experiments/ENCSR000AQG "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF456VOS https://www.encodeproject.org/files/ENCFF456VOS/@@download/ENCFF456VOS.bam ENCFF859DKS https://www.encodeproject.org/files/ENCFF859DKS/@@download/ENCFF859DKS.bam 40.5 M 0 22.1 M 0.544 SE 36 36 native 0.0 M 15.9 M 13.2 M 0.326 0.85 0.85 6.56 105 1.08 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b3da3de-eba4-4078-885a-9d86512796af/@@download/cross_correlation_plot/ENCFF583ZBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQM bradley-bernstein:DNA_Lib 5220 ENCFF583ZBF Illumina Genome Analyzer IIx 2017-02-27T22:47:21.895349+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2p68Y803693jXQj5PPP2z48 ENCSR000ATJ https://www.encodeproject.org/experiments/ENCSR000ATJ "transcription factor,chromatin remodeller" HDAC6-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF428XVO https://www.encodeproject.org/files/ENCFF428XVO/@@download/ENCFF428XVO.bam ENCFF566ZFX https://www.encodeproject.org/files/ENCFF566ZFX/@@download/ENCFF566ZFX.bam 43.0 M 0 34.8 M 0.809 SE 36 36 native 0.0 M 25.6 M 18.8 M 0.439 0.76 0.76 4.12 105 1.06 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/763a510b-8723-4d1f-a542-471f95ce5b24/@@download/cross_correlation_plot/ENCFF115AGC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAM bradley-bernstein:DNA_Lib 5224 ENCFF115AGC Illumina Genome Analyzer IIx 2017-02-17T18:55:50.765645+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2YXZk80369459y43pYZzF2Q ENCSR000ATJ https://www.encodeproject.org/experiments/ENCSR000ATJ "transcription factor,chromatin remodeller" HDAC6-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF213CZL https://www.encodeproject.org/files/ENCFF213CZL/@@download/ENCFF213CZL.bam ENCFF227CAY https://www.encodeproject.org/files/ENCFF227CAY/@@download/ENCFF227CAY.bam 41.7 M 0 19.6 M 0.470 SE 36 36 native 0.0 M 14.1 M 9.3 M 0.223 0.69 0.68 3.10 120 1.14 3.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/cae51d64-e1dd-4264-afac-8a38b66a11b6/@@download/cross_correlation_plot/ENCFF991ROT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAN bradley-bernstein:DNA_Lib 5223 ENCFF991ROT Illumina Genome Analyzer IIx 2017-02-17T18:24:51.476799+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2YXZzQ0369459y43pYZzF2q ENCSR000ATX https://www.encodeproject.org/experiments/ENCSR000ATX "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF374IMB https://www.encodeproject.org/files/ENCFF374IMB/@@download/ENCFF374IMB.bam ENCFF221GGU https://www.encodeproject.org/files/ENCFF221GGU/@@download/ENCFF221GGU.bam 38.9 M 0 35.4 M 0.908 SE 36 36 native 0.0 M 26.4 M 12.0 M 0.307 0.48 0.46 1.81 190 1.15 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9cdeb99-4372-48fd-acbf-2dc0d4280b9f/@@download/cross_correlation_plot/ENCFF000CAF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGJ bradley-bernstein:DNA_Lib 778 ENCFF000CAF HiSeq 2000 2016-12-11T08:42:02.705512+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Qk803693J2XX63yZ7Fx4 ENCSR000ATX https://www.encodeproject.org/experiments/ENCSR000ATX "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF822GDN https://www.encodeproject.org/files/ENCFF822GDN/@@download/ENCFF822GDN.bam ENCFF341CNR https://www.encodeproject.org/files/ENCFF341CNR/@@download/ENCFF341CNR.bam 24.1 M 0 19.6 M 0.814 SE 36 36 native 0.0 M 14.3 M 6.6 M 0.273 0.48 0.45 1.71 210 1.13 2.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e4276db-7632-4217-a093-5290f1a74336/@@download/cross_correlation_plot/ENCFF249VOJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB738TRV bradley-bernstein:DNA_Lib 1310 ENCFF249VOJ HiSeq 2000 2016-12-11T05:04:22.868684+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166QzQ0369BgG8x1ygv1Xk4 ENCSR000ATX https://www.encodeproject.org/experiments/ENCSR000ATX "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 3 bradley-bernstein ENCODE2 GRCh38 ENCFF679IPF https://www.encodeproject.org/files/ENCFF679IPF/@@download/ENCFF679IPF.bam ENCFF010NNN https://www.encodeproject.org/files/ENCFF010NNN/@@download/ENCFF010NNN.bam 72.8 M 0 68.0 M 0.933 SE 36 36 native 0.0 M 49.8 M 45.6 M 0.626 0.93 0.93 15.69 210 1.06 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/a73401e7-f416-456e-bf46-3827a4779459/@@download/cross_correlation_plot/ENCFF519FAZ-ENCFF084AGF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB434VHP,ENCLB136ULQ" "bradley-bernstein:DNA_Lib 1622,bradley-bernstein:DNA_Lib 1596" "ENCFF519FAZ,ENCFF084AGF" HiSeq 2000 2016-12-11T11:17:25.125660+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166V5Q0369GF0YB1zjPf78p ENCSR000AQA https://www.encodeproject.org/experiments/ENCSR000AQA "transcription factor,chromatin remodeller" KDM5B-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF915BFX https://www.encodeproject.org/files/ENCFF915BFX/@@download/ENCFF915BFX.bam ENCFF873CAZ https://www.encodeproject.org/files/ENCFF873CAZ/@@download/ENCFF873CAZ.bam 75.2 M 0 52.7 M 0.700 SE 36 36 native 0.0 M 39.8 M 28.0 M 0.372 0.71 0.73 3.95 105 1.25 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e944be5-493e-4f91-be86-53a3fb50d1d5/@@download/cross_correlation_plot/ENCFF000CBM-ENCFF000CBH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695AOR,ENCLB695AOO" "bradley-bernstein:DNA_Lib 5216,bradley-bernstein:DNA_Lib 5236" "ENCFF000CBM,ENCFF000CBH" Illumina Genome Analyzer 2016-12-11T11:09:07.482841+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16657003697yz601ypVJ3px ENCSR000AQA https://www.encodeproject.org/experiments/ENCSR000AQA "transcription factor,chromatin remodeller" KDM5B-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF529ZVO https://www.encodeproject.org/files/ENCFF529ZVO/@@download/ENCFF529ZVO.bam ENCFF712FGN https://www.encodeproject.org/files/ENCFF712FGN/@@download/ENCFF712FGN.bam 23.3 M 0 22.9 M 0.981 SE 36 36 native 0.0 M 17.7 M 13.0 M 0.556 0.74 0.72 3.44 180 1.03 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8ef666f-76ea-480a-bb86-7de9b11fff08/@@download/cross_correlation_plot/ENCFF137VMP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB357GGR bradley-bernstein:DNA_Lib 6127 ENCFF137VMP HiSeq 2500 2016-12-11T04:49:15.170905+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1665J003692yykb1zBpz835 ENCSR735JCD https://www.encodeproject.org/experiments/ENCSR735JCD "transcription factor,chromatin remodeller" KMT2B-human K562 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF966VXD https://www.encodeproject.org/files/ENCFF966VXD/@@download/ENCFF966VXD.bam ENCFF530BRA https://www.encodeproject.org/files/ENCFF530BRA/@@download/ENCFF530BRA.bam 20.7 M 0 20.2 M 0.977 SE 36 36 native 0.0 M 15.6 M 8.5 M 0.410 0.55 0.52 1.94 200 1.08 2.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/d8e99f84-e2b3-4c99-b758-00c96e473fad/@@download/cross_correlation_plot/ENCFF648WNU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB541ZLR bradley-bernstein:DNA_Lib 6125 ENCFF648WNU HiSeq 2500 2016-11-25T03:03:55.352723+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qV6Y003696bpJ9xxQvVX51 ENCSR735JCD https://www.encodeproject.org/experiments/ENCSR735JCD "transcription factor,chromatin remodeller" KMT2B-human K562 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF370NVV https://www.encodeproject.org/files/ENCFF370NVV/@@download/ENCFF370NVV.bam ENCFF423FKB https://www.encodeproject.org/files/ENCFF423FKB/@@download/ENCFF423FKB.bam 33.3 M 0 32.4 M 0.974 SE 76 36 36 0.0 M 24.7 M 19.1 M 0.574 0.78 0.77 4.21 200 1.04 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/4598c263-a79b-418e-804f-ca1d37af9afb/@@download/cross_correlation_plot/ENCFF792XQD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB653ZRV bradley-bernstein:DNA_Lib 6616 ENCFF792XQD HiSeq 2500 2016-11-25T20:39:07.328503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyb2803695JqYP6xFZzQ8P ENCSR000ATY https://www.encodeproject.org/experiments/ENCSR000ATY "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line bradley-bernstein ENCODE2 pending SE 36 HiSeq 2000 requires lab review ENCSR000AQH https://www.encodeproject.org/experiments/ENCSR000AQH "transcription factor,chromatin remodeller,RNA binding protein" PHF8-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF509IQQ https://www.encodeproject.org/files/ENCFF509IQQ/@@download/ENCFF509IQQ.bam ENCFF387ZPG https://www.encodeproject.org/files/ENCFF387ZPG/@@download/ENCFF387ZPG.bam 74.2 M 0 53.3 M 0.717 SE 36 36 native 0.0 M 41.7 M 25.0 M 0.337 0.64 0.68 3.39 120 2.36 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1102a73-1996-47ef-bc0a-84c7fb3b1ac1/@@download/cross_correlation_plot/ENCFF461XDG-ENCFF000CBB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABR bradley-bernstein:DNA_Lib 5235 "ENCFF461XDG,ENCFF000CBB" Illumina Genome Analyzer IIx 2016-12-11T11:12:13.332860+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166fB803698j1Pf95Q52y1F ENCSR000AQH https://www.encodeproject.org/experiments/ENCSR000AQH "transcription factor,chromatin remodeller,RNA binding protein" PHF8-human K562 immortalized cell line 3 bradley-bernstein ENCODE2 GRCh38 ENCFF302WSZ https://www.encodeproject.org/files/ENCFF302WSZ/@@download/ENCFF302WSZ.bam ENCFF741XCT https://www.encodeproject.org/files/ENCFF741XCT/@@download/ENCFF741XCT.bam 43.3 M 0 41.3 M 0.955 SE 36 36 native 0.0 M 31.3 M 28.9 M 0.667 0.93 0.92 13.17 150 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e87eb45-7012-4286-b2ea-93083e410f17/@@download/cross_correlation_plot/ENCFF609HJW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB951PQG bradley-bernstein:DNA_Lib 6492 ENCFF609HJW HiSeq 2500 2017-03-13T20:29:04.524287+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F33KG8Q0369231QyGqq18y6k ENCSR000AQI https://www.encodeproject.org/experiments/ENCSR000AQI "transcription factor,chromatin remodeller,RNA binding protein" RBBP5-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF713RXC https://www.encodeproject.org/files/ENCFF713RXC/@@download/ENCFF713RXC.bam ENCFF624XFS https://www.encodeproject.org/files/ENCFF624XFS/@@download/ENCFF624XFS.bam 68.1 M 0 37.3 M 0.547 SE 36 36 native 0.0 M 27.9 M 6.8 M 0.099 0.27 0.31 2.08 170 1.20 3.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc602f80-bf26-49f4-b558-b206fe325837/@@download/cross_correlation_plot/ENCFF148AGP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVM bradley-bernstein:DNA_Lib 5239 ENCFF148AGP Illumina Genome Analyzer IIx 2017-02-27T22:48:24.608202+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2p6GfQ0369069bb8ZbZqyVG ENCSR000AQI https://www.encodeproject.org/experiments/ENCSR000AQI "transcription factor,chromatin remodeller,RNA binding protein" RBBP5-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF550DDF https://www.encodeproject.org/files/ENCFF550DDF/@@download/ENCFF550DDF.bam ENCFF849RLM https://www.encodeproject.org/files/ENCFF849RLM/@@download/ENCFF849RLM.bam 41.9 M 0 37.3 M 0.891 SE 36 36 native 0.0 M 27.9 M 23.8 M 0.568 0.87 0.87 7.70 100 1.26 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/867aa86c-5ee7-44f2-87b0-fe70fd5fe4fe/@@download/cross_correlation_plot/ENCFF343WXI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVN bradley-bernstein:DNA_Lib 5240 ENCFF343WXI Illumina Genome Analyzer IIx 2017-02-27T22:48:03.475345+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2p6GvQ0369Kqf928b53YFY2 ENCSR000ATM https://www.encodeproject.org/experiments/ENCSR000ATM "transcription factor,chromatin remodeller" REST-human K562 immortalized cell line bradley-bernstein ENCODE2 pending SE "76,36" "HiSeq 2000,HiSeq 2500" unreviewed ENCSR530IUH https://www.encodeproject.org/experiments/ENCSR530IUH "transcription factor,chromatin remodeller" RING1-human K562 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF668VFP https://www.encodeproject.org/files/ENCFF668VFP/@@download/ENCFF668VFP.bam ENCFF070GOJ https://www.encodeproject.org/files/ENCFF070GOJ/@@download/ENCFF070GOJ.bam 26.7 M 0 26.2 M 0.983 SE 76 36 36 0.0 M 20.2 M 16.7 M 0.626 0.83 0.83 5.66 205 1.02 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/25204585-36b1-4ed5-aba1-9b445122ed85/@@download/cross_correlation_plot/ENCFF106HFE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB619BFK bradley-bernstein:DNA_Lib 6228 ENCFF106HFE HiSeq 2500 2016-11-25T20:39:30.664150+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyZB003692FXJff1QzKvbQ ENCSR530IUH https://www.encodeproject.org/experiments/ENCSR530IUH "transcription factor,chromatin remodeller" RING1-human K562 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF157HDL https://www.encodeproject.org/files/ENCFF157HDL/@@download/ENCFF157HDL.bam ENCFF618RDR https://www.encodeproject.org/files/ENCFF618RDR/@@download/ENCFF618RDR.bam 21.3 M 0 21.1 M 0.991 SE 36 36 native 0.0 M 16.3 M 13.8 M 0.649 0.85 0.84 6.15 190 1.03 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/ebb8b3d0-ac95-40f1-9673-72712e262101/@@download/cross_correlation_plot/ENCFF603DEK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB306EUL bradley-bernstein:DNA_Lib 5961 ENCFF603DEK HiSeq 2500 2016-11-25T03:04:16.725201+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qV5g803698X1qkv5Qyzp7x ENCSR000AUA https://www.encodeproject.org/experiments/ENCSR000AUA "transcription factor,chromatin remodeller" RNF2-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF965ISU https://www.encodeproject.org/files/ENCFF965ISU/@@download/ENCFF965ISU.bam ENCFF877IBV https://www.encodeproject.org/files/ENCFF877IBV/@@download/ENCFF877IBV.bam 43.5 M 0 37.5 M 0.862 SE 36 36 native 0.0 M 27.0 M 6.2 M 0.141 0.26 0.28 1.87 150 1.15 2.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/333f2a64-d6fa-4065-a297-b7622bdedc7f/@@download/cross_correlation_plot/ENCFF797TCA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATL bradley-bernstein:DNA_Lib 775 ENCFF797TCA HiSeq 2000 2017-03-01T18:15:40.650891+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pxKqj0369BX5568Zz051G3 ENCSR000AQJ https://www.encodeproject.org/experiments/ENCSR000AQJ "transcription factor,chromatin remodeller" SAP30-human K562 immortalized cell line 1 bradley-bernstein ENCODE2 GRCh38 ENCFF416LJL https://www.encodeproject.org/files/ENCFF416LJL/@@download/ENCFF416LJL.bam ENCFF243TCE https://www.encodeproject.org/files/ENCFF243TCE/@@download/ENCFF243TCE.bam 48.3 M 0 30.9 M 0.639 SE 36 36 native 0.0 M 23.2 M 12.0 M 0.248 0.56 0.57 2.43 110 1.21 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/4fe6ea27-ce54-4e92-8e9e-a1375ba47d96/@@download/cross_correlation_plot/ENCFF873QQB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUN bradley-bernstein:DNA_Lib 5244 ENCFF873QQB Illumina Genome Analyzer IIx 2017-03-01T18:15:49.363404+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2px9J00369FZq3f5Q148vVJ ENCSR000AQJ https://www.encodeproject.org/experiments/ENCSR000AQJ "transcription factor,chromatin remodeller" SAP30-human K562 immortalized cell line 2 bradley-bernstein ENCODE2 GRCh38 ENCFF961HAZ https://www.encodeproject.org/files/ENCFF961HAZ/@@download/ENCFF961HAZ.bam ENCFF106SWN https://www.encodeproject.org/files/ENCFF106SWN/@@download/ENCFF106SWN.bam 43.2 M 0 23.7 M 0.549 SE 36 36 native 0.0 M 17.6 M 7.7 M 0.178 0.47 0.44 1.69 170 1.17 4.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/dfcb50cb-8289-4df3-82b4-789e18d85323/@@download/cross_correlation_plot/ENCFF531OCK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUO bradley-bernstein:DNA_Lib 5243 ENCFF531OCK Illumina Genome Analyzer IIx 2017-03-01T18:15:47.714243+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2px9Y00369336Q1JgKPfx62 ENCSR000AUC https://www.encodeproject.org/experiments/ENCSR000AUC "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human K562 immortalized cell line bradley-bernstein ENCODE2 pending SE "76,36" "Illumina Genome Analyzer IIx,HiSeq 2500" unreviewed ENCSR915SJR https://www.encodeproject.org/experiments/ENCSR915SJR "RNA binding protein,chromatin remodeller" WDR5-human K562 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF196NQE https://www.encodeproject.org/files/ENCFF196NQE/@@download/ENCFF196NQE.bam ENCFF553CLP https://www.encodeproject.org/files/ENCFF553CLP/@@download/ENCFF553CLP.bam 28.3 M 0 28.0 M 0.988 SE 76 36 36 0.0 M 21.4 M 20.8 M 0.735 0.98 0.98 43.92 205 1.03 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d7a8d86-e817-4b75-bf61-7732593be441/@@download/cross_correlation_plot/ENCFF143DZF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB487ERN bradley-bernstein:DNA_Lib 6870 ENCFF143DZF HiSeq 2500 2016-11-25T20:38:42.437067+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyZf803695JqYP6xFZzQ85 ENCSR915SJR https://www.encodeproject.org/experiments/ENCSR915SJR "RNA binding protein,chromatin remodeller" WDR5-human K562 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF326UWJ https://www.encodeproject.org/files/ENCFF326UWJ/@@download/ENCFF326UWJ.bam ENCFF035XAF https://www.encodeproject.org/files/ENCFF035XAF/@@download/ENCFF035XAF.bam 55.0 M 0 53.1 M 0.964 SE 76 36 36 0.0 M 40.2 M 38.4 M 0.698 0.96 0.96 26.78 195 1.04 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6dcd2b5-e194-49ce-8970-b5932261f5d9/@@download/cross_correlation_plot/ENCFF240MSC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB654QVD bradley-bernstein:DNA_Lib 7403 ENCFF240MSC HiSeq 2500 2016-11-25T20:39:42.163783+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qyZq003698466zzVF9GVgz ENCSR367UDO https://www.encodeproject.org/experiments/ENCSR367UDO control Control-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF056BZA https://www.encodeproject.org/files/ENCFF056BZA/@@download/ENCFF056BZA.bam ENCFF406HBU https://www.encodeproject.org/files/ENCFF406HBU/@@download/ENCFF406HBU.bam 44.3 M 0 42.9 M 0.969 SE 37 37 None 0.0 M 32.8 M 31.8 M 0.719 0.99 0.99 72.01 245 1.01 0.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9273348-24ac-40b6-9eb0-1c1136d743ff/@@download/cross_correlation_plot/ENCFF002AXD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB170BJG bradley-bernstein:DNA_Lib 4480 ENCFF002AXD HiSeq 2500 2016-05-06T18:13:35.995782+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqFxj03690j2jgp42pQ2vK ENCSR367UDO https://www.encodeproject.org/experiments/ENCSR367UDO control Control-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF876PYV https://www.encodeproject.org/files/ENCFF876PYV/@@download/ENCFF876PYV.bam ENCFF966DNY https://www.encodeproject.org/files/ENCFF966DNY/@@download/ENCFF966DNY.bam 57.5 M 0 56.2 M 0.978 SE "76,36" 36 36 0.0 M 42.6 M 38.9 M 0.677 0.92 0.92 12.35 200 1.01 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/da017055-946a-43ea-bfca-ad6fafefb1fe/@@download/cross_correlation_plot/ENCFF353BJM-ENCFF595IMS-ENCFF699FIQ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB960FNO bradley-bernstein:DNA_Lib 3040 "ENCFF595IMS,ENCFF699FIQ,ENCFF353BJM" "HiSeq 2000,HiSeq 2500" 2016-10-14T00:32:02.678468+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzv2x80369JyjGgF5Kg6B5f ENCSR113REG https://www.encodeproject.org/experiments/ENCSR113REG "transcription factor,RNA binding protein" CTCF-human Karpas-422 immortalized cell line bradley-bernstein ENCODE3 no fastqs requires lab review ENCSR964LSW https://www.encodeproject.org/experiments/ENCSR964LSW "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human Karpas-422 immortalized cell line bradley-bernstein ENCODE3 no fastqs processing ENCSR317NQG https://www.encodeproject.org/experiments/ENCSR317NQG "histone,histone modification,narrow histone mark" H2AFZ-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF873OWG https://www.encodeproject.org/files/ENCFF873OWG/@@download/ENCFF873OWG.bam ENCFF538FOA https://www.encodeproject.org/files/ENCFF538FOA/@@download/ENCFF538FOA.bam 41.7 M 0 39.5 M 0.947 SE "76,37" 36 36 0.0 M 30.7 M 29.4 M 0.704 0.96 0.96 23.59 190 1.03 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/098080be-c464-49a0-b536-829187a07936/@@download/cross_correlation_plot/ENCFF075OEJ-ENCFF498AEI-ENCFF002AUI_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB264SHS bradley-bernstein:DNA_Lib 4474 "ENCFF075OEJ,ENCFF002AUI,ENCFF498AEI" HiSeq 2500 2016-10-14T00:37:19.040026+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzv5F0036976gY8QbP06kkK ENCSR317NQG https://www.encodeproject.org/experiments/ENCSR317NQG "histone,histone modification,narrow histone mark" H2AFZ-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF273DNO https://www.encodeproject.org/files/ENCFF273DNO/@@download/ENCFF273DNO.bam ENCFF833GAA https://www.encodeproject.org/files/ENCFF833GAA/@@download/ENCFF833GAA.bam 39.5 M 0 37.9 M 0.962 SE 36 36 native 0.0 M 29.5 M 28.2 M 0.714 0.96 0.96 24.11 200 1.05 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/655cca37-2913-4ef2-8cf0-9a915129f9e5/@@download/cross_correlation_plot/ENCFF002BAE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB242EAC bradley-bernstein:DNA_Lib 3203 ENCFF002BAE HiSeq 2000 2016-08-09T16:52:07.903223+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV6100369GFvV7jG2Q3FGY ENCSR660IQS https://www.encodeproject.org/experiments/ENCSR660IQS "histone,histone modification,narrow histone mark" H3K27ac-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF949LGB https://www.encodeproject.org/files/ENCFF949LGB/@@download/ENCFF949LGB.bam ENCFF107HAO https://www.encodeproject.org/files/ENCFF107HAO/@@download/ENCFF107HAO.bam 40.0 M 0 38.3 M 0.957 SE 37 37 native 0.0 M 31.7 M 25.3 M 0.632 0.88 0.89 9.39 220 1.27 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/7b662d77-9661-422c-b659-2b40cdd0257a/@@download/cross_correlation_plot/ENCFF002BES.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB415MTR bradley-bernstein:DNA_Lib 4844 ENCFF002BES HiSeq 2500 2016-08-09T15:15:59.800625+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPf0Q0369KV2JG9019fqyK ENCSR660IQS https://www.encodeproject.org/experiments/ENCSR660IQS "histone,histone modification,narrow histone mark" H3K27ac-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF854WUY https://www.encodeproject.org/files/ENCFF854WUY/@@download/ENCFF854WUY.bam ENCFF587YTL https://www.encodeproject.org/files/ENCFF587YTL/@@download/ENCFF587YTL.bam 34.1 M 0 33.4 M 0.980 SE 36 36 native 0.0 M 28.6 M 19.7 M 0.579 0.71 0.73 3.88 235 1.32 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cb136d6-41f3-4af0-8863-db567c70142b/@@download/cross_correlation_plot/ENCFF033EKA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB058TFM bradley-bernstein:DNA_Lib 3026 ENCFF033EKA HiSeq 2000 2016-08-09T15:14:24.613513+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPf2j03691KXFYF81JBJ8j ENCSR963HAR https://www.encodeproject.org/experiments/ENCSR963HAR "histone,histone modification,broad histone mark" H3K27me3-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF813CKH https://www.encodeproject.org/files/ENCFF813CKH/@@download/ENCFF813CKH.bam ENCFF305FOB https://www.encodeproject.org/files/ENCFF305FOB/@@download/ENCFF305FOB.bam 70.7 M 0 67.0 M 0.948 SE "76,37" 36 36 0.0 M 51.9 M 50.0 M 0.708 0.96 0.96 28.03 220 1.01 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b176d71-e8e2-49fb-a46f-41355ee8c833/@@download/cross_correlation_plot/ENCFF385XII-ENCFF825OTF-ENCFF002AZK-ENCFF002ATX_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB612QFL,ENCLB224YGM" "bradley-bernstein:DNA_Lib 4479,bradley-bernstein:DNA_Lib 4467" "ENCFF385XII,ENCFF002ATX,ENCFF825OTF,ENCFF002AZK" HiSeq 2500 2016-10-14T00:50:50.687856+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvJY00369Fx9xzKkKVk4gX ENCSR963HAR https://www.encodeproject.org/experiments/ENCSR963HAR "histone,histone modification,broad histone mark" H3K27me3-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF960YXZ https://www.encodeproject.org/files/ENCFF960YXZ/@@download/ENCFF960YXZ.bam ENCFF950EFD https://www.encodeproject.org/files/ENCFF950EFD/@@download/ENCFF950EFD.bam 79.0 M 0 76.2 M 0.964 SE "76,36" 36 36 0.0 M 57.7 M 55.5 M 0.703 0.96 0.96 27.03 175 1.01 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/24150c89-3920-4348-96db-e0033d0a315e/@@download/cross_correlation_plot/ENCFF608HTP-ENCFF246LDW-ENCFF002AVG_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB054TSL bradley-bernstein:DNA_Lib 3860 "ENCFF246LDW,ENCFF608HTP,ENCFF002AVG" "HiSeq 2000,HiSeq 2500" 2016-10-14T00:51:18.741066+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvJgQ03690k69zzkVz8Kyq ENCSR867UKC https://www.encodeproject.org/experiments/ENCSR867UKC "histone,histone modification,broad histone mark" H3K36me3-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF936AVN https://www.encodeproject.org/files/ENCFF936AVN/@@download/ENCFF936AVN.bam ENCFF513FVY https://www.encodeproject.org/files/ENCFF513FVY/@@download/ENCFF513FVY.bam 35.7 M 0 34.7 M 0.972 SE 36 36 native 0.0 M 24.8 M 24.2 M 0.680 0.98 0.98 45.31 175 1.02 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/495646f7-37eb-41b5-a2a7-a931163fb0e3/@@download/cross_correlation_plot/ENCFF002BBO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB045WMI bradley-bernstein:DNA_Lib 3861 ENCFF002BBO HiSeq 2000 2016-10-10T22:37:57.675543+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzxyKq803692x3BZK0zKyjGx ENCSR867UKC https://www.encodeproject.org/experiments/ENCSR867UKC "histone,histone modification,broad histone mark" H3K36me3-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF025UVM https://www.encodeproject.org/files/ENCFF025UVM/@@download/ENCFF025UVM.bam ENCFF513FEQ https://www.encodeproject.org/files/ENCFF513FEQ/@@download/ENCFF513FEQ.bam 74.2 M 0 69.6 M 0.938 SE "76,37" 36 36 0.0 M 51.5 M 49.3 M 0.664 0.96 0.96 22.87 220 1.02 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/1de5db2d-7631-411f-9aed-0fb766ac6b8a/@@download/cross_correlation_plot/ENCFF318MQP-ENCFF777FCM-ENCFF002AZT_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB235TND bradley-bernstein:DNA_Lib 4469 "ENCFF777FCM,ENCFF002AZT,ENCFF318MQP" HiSeq 2500 2016-10-14T00:52:58.141369+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvYP003692j0067VKgFqx7 ENCSR306VSH https://www.encodeproject.org/experiments/ENCSR306VSH "histone,histone modification,broad histone mark" H3K4me1-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF649JYS https://www.encodeproject.org/files/ENCFF649JYS/@@download/ENCFF649JYS.bam ENCFF335LFN https://www.encodeproject.org/files/ENCFF335LFN/@@download/ENCFF335LFN.bam 73.0 M 0 66.8 M 0.915 SE "76,36" 36 36 0.0 M 55.1 M 49.4 M 0.676 0.90 0.90 10.70 175 1.19 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/da7c8793-a9bf-4b5c-b96e-513609afbee2/@@download/cross_correlation_plot/ENCFF758OYI-ENCFF992CPB-ENCFF002AVM_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB352ZHN bradley-bernstein:DNA_Lib 3859 "ENCFF002AVM,ENCFF758OYI,ENCFF992CPB" "HiSeq 2000,HiSeq 2500" 2016-10-14T00:55:48.356870+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvZqQ03693Zkj8VvJVyYQ3 ENCSR306VSH https://www.encodeproject.org/experiments/ENCSR306VSH "histone,histone modification,broad histone mark" H3K4me1-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF858QLA https://www.encodeproject.org/files/ENCFF858QLA/@@download/ENCFF858QLA.bam ENCFF250UNM https://www.encodeproject.org/files/ENCFF250UNM/@@download/ENCFF250UNM.bam 164.3 M 0 144.9 M 0.882 SE "37,36" 36 36 0.0 M 114.2 M 96.3 M 0.586 0.84 0.85 6.72 205 1.10 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/6deffb44-2eb6-4c95-a653-f08c841a6694/@@download/cross_correlation_plot/ENCFF551AFN-ENCFF002AZJ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB980ZHA bradley-bernstein:DNA_Lib 4464 "ENCFF551AFN,ENCFF002AZJ" HiSeq 2500 2016-10-14T00:58:40.031466+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvZzQ03692KBqKFQQB92PG ENCSR870IGD https://www.encodeproject.org/experiments/ENCSR870IGD "histone,histone modification,narrow histone mark" H3K4me2-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF906AKC https://www.encodeproject.org/files/ENCFF906AKC/@@download/ENCFF906AKC.bam ENCFF749NMA https://www.encodeproject.org/files/ENCFF749NMA/@@download/ENCFF749NMA.bam 31.3 M 0 30.8 M 0.985 SE 36 36 native 0.0 M 25.9 M 11.6 M 0.370 0.47 0.44 1.77 205 1.34 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b2d1c39-1b51-4598-8344-1f8c6434e6e5/@@download/cross_correlation_plot/ENCFF002ATV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB940YUR bradley-bernstein:DNA_Lib 3024 ENCFF002ATV HiSeq 2000 2016-10-26T19:26:26.205606+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08JGQ80369FvKVQXxFJj78P ENCSR870IGD https://www.encodeproject.org/experiments/ENCSR870IGD "histone,histone modification,narrow histone mark" H3K4me2-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF514EAI https://www.encodeproject.org/files/ENCFF514EAI/@@download/ENCFF514EAI.bam ENCFF748AUJ https://www.encodeproject.org/files/ENCFF748AUJ/@@download/ENCFF748AUJ.bam 36.6 M 0 34.2 M 0.935 SE "37,36" 36 36 0.0 M 27.7 M 26.0 M 0.710 0.94 0.94 17.18 220 1.22 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee28654d-3bf0-481a-909d-fcc6de49e654/@@download/cross_correlation_plot/ENCFF853FZM-ENCFF002AZI_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB581EFZ bradley-bernstein:DNA_Lib 4465 "ENCFF853FZM,ENCFF002AZI" HiSeq 2500 2016-10-14T02:20:48.598028+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzxKp00369KPK0fF5f4Kkq4 ENCSR910XKX https://www.encodeproject.org/experiments/ENCSR910XKX "histone,histone modification,narrow histone mark" H3K4me3-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF104EPZ https://www.encodeproject.org/files/ENCFF104EPZ/@@download/ENCFF104EPZ.bam ENCFF326RDZ https://www.encodeproject.org/files/ENCFF326RDZ/@@download/ENCFF326RDZ.bam 43.7 M 0 41.5 M 0.948 SE "76,37" 36 36 0.0 M 30.7 M 29.5 M 0.674 0.96 0.96 25.03 225 1.10 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/db3995b7-232d-4202-9c9c-db8f99c80d92/@@download/cross_correlation_plot/ENCFF118VNJ-ENCFF540TNZ-ENCFF002AZL-ENCFF002AUP_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB269URX,ENCLB386GMR" "bradley-bernstein:DNA_Lib 4466,bradley-bernstein:DNA_Lib 4478" "ENCFF118VNJ,ENCFF002AUP,ENCFF002AZL,ENCFF540TNZ" HiSeq 2500 2016-10-14T00:36:23.251987+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvJF803690xQg2GJKVqf32 ENCSR910XKX https://www.encodeproject.org/experiments/ENCSR910XKX "histone,histone modification,narrow histone mark" H3K4me3-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF859YTJ https://www.encodeproject.org/files/ENCFF859YTJ/@@download/ENCFF859YTJ.bam ENCFF201XRG https://www.encodeproject.org/files/ENCFF201XRG/@@download/ENCFF201XRG.bam 49.5 M 0 47.2 M 0.954 SE "76,36" 36 36 0.0 M 36.3 M 31.9 M 0.645 0.89 0.90 10.23 220 1.42 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf1c0c4a-643a-4d5c-afba-b5e44c19863b/@@download/cross_correlation_plot/ENCFF112OFR-ENCFF084UZH-ENCFF002BAB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB622GCR bradley-bernstein:DNA_Lib 3200 "ENCFF112OFR,ENCFF084UZH,ENCFF002BAB" "HiSeq 2000,HiSeq 2500" 2016-10-14T00:35:43.168915+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvJQj0369JyjGgF5Kg6B76 ENCSR604III https://www.encodeproject.org/experiments/ENCSR604III "histone,histone modification,broad histone mark" H3K79me2-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF706KDF https://www.encodeproject.org/files/ENCFF706KDF/@@download/ENCFF706KDF.bam ENCFF405KBG https://www.encodeproject.org/files/ENCFF405KBG/@@download/ENCFF405KBG.bam 82.7 M 0 79.1 M 0.957 SE "76,37" 36 36 0.0 M 61.2 M 57.7 M 0.698 0.94 0.94 17.78 185 1.03 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/8355d8d1-597b-46f5-a0ee-108000759fcc/@@download/cross_correlation_plot/ENCFF782NXB-ENCFF169LQB-ENCFF002AUJ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB843KES bradley-bernstein:DNA_Lib 4475 "ENCFF782NXB,ENCFF002AUJ,ENCFF169LQB" HiSeq 2500 2016-10-14T01:03:36.902006+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvqB803699ZP6P49YF4Zfp ENCSR604III https://www.encodeproject.org/experiments/ENCSR604III "histone,histone modification,broad histone mark" H3K79me2-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF845IZE https://www.encodeproject.org/files/ENCFF845IZE/@@download/ENCFF845IZE.bam ENCFF313WPH https://www.encodeproject.org/files/ENCFF313WPH/@@download/ENCFF313WPH.bam 86.9 M 0 83.1 M 0.956 SE "76,36" 36 36 0.0 M 64.6 M 52.9 M 0.608 0.82 0.82 5.56 190 1.06 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3f5ed1a-309e-4f0b-8f74-806bbefd6a0a/@@download/cross_correlation_plot/ENCFF377OKN-ENCFF950AEO-ENCFF567BQU-ENCFF631BMY_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB981FZC bradley-bernstein:DNA_Lib 3204 "ENCFF377OKN,ENCFF567BQU,ENCFF631BMY" HiSeq 2000 2016-10-14T01:04:53.949851+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvqP80369BXpF7zZK38k04 ENCSR058SHN https://www.encodeproject.org/experiments/ENCSR058SHN "histone,histone modification,narrow histone mark" H3K9ac-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF137WNL https://www.encodeproject.org/files/ENCFF137WNL/@@download/ENCFF137WNL.bam ENCFF192APJ https://www.encodeproject.org/files/ENCFF192APJ/@@download/ENCFF192APJ.bam 35.9 M 0 34.9 M 0.973 SE 36 36 native 0.0 M 28.6 M 26.1 M 0.728 0.95 0.95 20.66 185 1.36 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/9237a337-1674-43ca-8b73-d3b40998ffa4/@@download/cross_correlation_plot/ENCFF002BAP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB948BXD bradley-bernstein:DNA_Lib 4860 ENCFF002BAP HiSeq 2500 2016-08-09T16:51:49.914792+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV5k80369BB4PPpG2jBgJX ENCSR058SHN https://www.encodeproject.org/experiments/ENCSR058SHN "histone,histone modification,narrow histone mark" H3K9ac-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF194BVB https://www.encodeproject.org/files/ENCFF194BVB/@@download/ENCFF194BVB.bam ENCFF283THE https://www.encodeproject.org/files/ENCFF283THE/@@download/ENCFF283THE.bam 42.3 M 0 39.5 M 0.934 SE 36 36 native 0.0 M 32.6 M 29.5 M 0.696 0.91 0.92 12.75 195 1.39 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/5fd97ea0-4296-4044-b356-6fc9dcbfc3b9/@@download/cross_correlation_plot/ENCFF002BAC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB685ASQ bradley-bernstein:DNA_Lib 3201 ENCFF002BAC HiSeq 2000 2016-08-09T16:52:15.790705+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV5qQ036927gfXkG2b2zYK ENCSR473TDG https://www.encodeproject.org/experiments/ENCSR473TDG "histone,histone modification,broad histone mark" H3K9me2-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF614ZDQ https://www.encodeproject.org/files/ENCFF614ZDQ/@@download/ENCFF614ZDQ.bam ENCFF019THY https://www.encodeproject.org/files/ENCFF019THY/@@download/ENCFF019THY.bam 32.2 M 0 31.2 M 0.968 SE 37 37 native 0.0 M 23.9 M 20.5 M 0.636 0.92 0.92 12.42 200 1.02 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecb7bf23-1dd9-48ce-8753-c291226d42d8/@@download/cross_correlation_plot/ENCFF002AYW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB970BPP bradley-bernstein:DNA_Lib 4786 ENCFF002AYW HiSeq 2500 2016-10-26T19:26:48.972284+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08JK4003692404175P5QVzP ENCSR473TDG https://www.encodeproject.org/experiments/ENCSR473TDG "histone,histone modification,broad histone mark" H3K9me2-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF238IVG https://www.encodeproject.org/files/ENCFF238IVG/@@download/ENCFF238IVG.bam ENCFF903OMJ https://www.encodeproject.org/files/ENCFF903OMJ/@@download/ENCFF903OMJ.bam 25.4 M 0 24.6 M 0.969 SE 37 37 native 0.0 M 19.0 M 15.1 M 0.594 0.88 0.88 8.16 190 1.02 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ed3dda2-744d-485b-8d50-b19a13c81b20/@@download/cross_correlation_plot/ENCFF002AYX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB823MUF bradley-bernstein:DNA_Lib 4787 ENCFF002AYX HiSeq 2500 2016-10-26T19:26:54.271776+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08JK780369BX1xqb1B80J1B ENCSR978BQI https://www.encodeproject.org/experiments/ENCSR978BQI "histone,histone modification,broad histone mark" H3K9me3-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF701LLO https://www.encodeproject.org/files/ENCFF701LLO/@@download/ENCFF701LLO.bam ENCFF605LLV https://www.encodeproject.org/files/ENCFF605LLV/@@download/ENCFF605LLV.bam 166.8 M 0 153.9 M 0.923 SE "76,37,36" 36 36 0.0 M 105.4 M 95.9 M 0.575 0.91 0.91 11.05 215 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b773592-bbfc-4f50-9c8b-9095fee6efd1/@@download/cross_correlation_plot/ENCFF980XBW-ENCFF023UOC-ENCFF584ZQM-ENCFF002AVO_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB425UAC bradley-bernstein:DNA_Lib 4476 "ENCFF980XBW,ENCFF002AVO,ENCFF023UOC,ENCFF584ZQM" HiSeq 2500 2016-10-14T01:00:30.130785+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvbYj0369Fg02vx4K4K4gV ENCSR978BQI https://www.encodeproject.org/experiments/ENCSR978BQI "histone,histone modification,broad histone mark" H3K9me3-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF525TRP https://www.encodeproject.org/files/ENCFF525TRP/@@download/ENCFF525TRP.bam ENCFF919ZTP https://www.encodeproject.org/files/ENCFF919ZTP/@@download/ENCFF919ZTP.bam 78.2 M 0 74.5 M 0.952 SE "76,36" 36 36 0.0 M 47.9 M 44.3 M 0.567 0.93 0.93 14.05 200 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/539c3b5b-22b3-467f-afac-b9d50f451723/@@download/cross_correlation_plot/ENCFF299GJB-ENCFF720ANW-ENCFF002ASV_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB477KVN bradley-bernstein:DNA_Lib 3205 "ENCFF002ASV,ENCFF299GJB,ENCFF720ANW" "HiSeq 2000,HiSeq 2500" 2016-10-14T00:57:51.822882+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzvbgQ0369BXpF7zZK38jyG ENCSR159CDJ https://www.encodeproject.org/experiments/ENCSR159CDJ "histone,histone modification,broad histone mark" H4K20me1-human Karpas-422 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF671PBU https://www.encodeproject.org/files/ENCFF671PBU/@@download/ENCFF671PBU.bam ENCFF867KNH https://www.encodeproject.org/files/ENCFF867KNH/@@download/ENCFF867KNH.bam 47.2 M 0 44.7 M 0.948 SE "37,36" 36 native 0.0 M 35.1 M 33.8 M 0.717 0.97 0.97 38.92 200 1.01 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/adc35ca9-c6d9-4f6c-94d3-2594b51a8754/@@download/cross_correlation_plot/ENCFF589APP-ENCFF814EZN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB408PTN bradley-bernstein:DNA_Lib 4471 "ENCFF589APP,ENCFF814EZN" HiSeq 2500 2016-10-13T04:27:53.613725+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzxyPyj0369Pgff22G34zq13 ENCSR159CDJ https://www.encodeproject.org/experiments/ENCSR159CDJ "histone,histone modification,broad histone mark" H4K20me1-human Karpas-422 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF620BEW https://www.encodeproject.org/files/ENCFF620BEW/@@download/ENCFF620BEW.bam ENCFF653ZJM https://www.encodeproject.org/files/ENCFF653ZJM/@@download/ENCFF653ZJM.bam 32.6 M 0 31.0 M 0.950 SE 36 36 native 0.0 M 24.4 M 21.6 M 0.662 0.89 0.89 9.19 210 1.02 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a523bab-c3cc-4103-b344-d46972aeebd0/@@download/cross_correlation_plot/ENCFF002BAD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB892ZTC bradley-bernstein:DNA_Lib 3202 ENCFF002BAD HiSeq 2000 2016-10-10T22:39:59.030339+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzxyQ780369Pgff22G34zq1F ENCSR000ALS https://www.encodeproject.org/experiments/ENCSR000ALS control Control-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF292GHV https://www.encodeproject.org/files/ENCFF292GHV/@@download/ENCFF292GHV.bam ENCFF604QBU https://www.encodeproject.org/files/ENCFF604QBU/@@download/ENCFF604QBU.bam 21.1 M 0 10.7 M 0.508 SE 36 36 native 0.0 M 6.6 M 6.5 M 0.309 0.99 0.99 92.60 95 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8435057-18b5-4eac-9cc5-2c1494747f1b/@@download/cross_correlation_plot/ENCFF000CMD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIA ENCFF000CMD Illumina Genome Analyzer IIx 2016-08-09T15:58:35.594780+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYBz003696GPBjjv2bkQbg ENCSR000ALS https://www.encodeproject.org/experiments/ENCSR000ALS control Control-human keratinocyte primary cell 4 bradley-bernstein ENCODE2 GRCh38 ENCFF715NGU https://www.encodeproject.org/files/ENCFF715NGU/@@download/ENCFF715NGU.bam ENCFF587LRA https://www.encodeproject.org/files/ENCFF587LRA/@@download/ENCFF587LRA.bam 17.2 M 0 11.0 M 0.636 SE 51 36 36 0.0 M 7.4 M 7.3 M 0.424 0.99 0.99 71.30 160 1.01 0.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/33c4c137-88eb-46b0-b768-9e726267c159/@@download/cross_correlation_plot/ENCFF000CMJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIB ENCFF000CMJ Illumina Genome Analyzer IIe 2017-03-13T17:16:58.989730+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F33G5J003695jx661yv5F39P ENCSR000ALJ https://www.encodeproject.org/experiments/ENCSR000ALJ "transcription factor,RNA binding protein" CTCF-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF775IQB https://www.encodeproject.org/files/ENCFF775IQB/@@download/ENCFF775IQB.bam ENCFF665RLB https://www.encodeproject.org/files/ENCFF665RLB/@@download/ENCFF665RLB.bam 21.5 M 0 7.4 M 0.343 SE 36 36 native 0.0 M 4.5 M 4.1 M 0.189 0.93 0.93 15.05 145 4.34 3.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ddb3a3d-4006-41f0-bf04-829bba5c52d0/@@download/cross_correlation_plot/ENCFF000CMM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHO ENCFF000CMM Illumina Genome Analyzer IIx 2016-12-11T04:35:59.799051+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165yv803698j1Pf95Q52xyq ENCSR000ALJ https://www.encodeproject.org/experiments/ENCSR000ALJ "transcription factor,RNA binding protein" CTCF-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF168LHY https://www.encodeproject.org/files/ENCFF168LHY/@@download/ENCFF168LHY.bam ENCFF363JXS https://www.encodeproject.org/files/ENCFF363JXS/@@download/ENCFF363JXS.bam 9.0 M 0 5.3 M 0.587 SE 36 36 native 0.0 M 3.9 M 3.6 M 0.399 0.93 0.93 13.62 190 3.60 2.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fcf9587-6d85-4cd1-8d84-a3f0ba04d61b/@@download/cross_correlation_plot/ENCFF000CMF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHN ENCFF000CMF Illumina Genome Analyzer IIe 2016-12-11T04:31:17.767128+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165z1Q0369BV55708G9qbYP ENCSR000ALJ https://www.encodeproject.org/experiments/ENCSR000ALJ "transcription factor,RNA binding protein" CTCF-human keratinocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF145LCR https://www.encodeproject.org/files/ENCFF145LCR/@@download/ENCFF145LCR.bam ENCFF442VNH https://www.encodeproject.org/files/ENCFF442VNH/@@download/ENCFF442VNH.bam 4.9 M 0 3.5 M 0.714 SE 36 36 native 0.0 M 2.7 M 2.4 M 0.484 0.89 0.89 8.84 185 2.52 3.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/439ae205-009b-4947-9f64-0a3185a99805/@@download/cross_correlation_plot/ENCFF000CMG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHM ENCFF000CMG Illumina Genome Analyzer IIe 2016-12-11T04:30:48.513442+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165z7003692yykb1zBpz815 ENCSR000ARL https://www.encodeproject.org/experiments/ENCSR000ARL "histone,histone modification,narrow histone mark" H2AFZ-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF250RDZ https://www.encodeproject.org/files/ENCFF250RDZ/@@download/ENCFF250RDZ.bam ENCFF914GQH https://www.encodeproject.org/files/ENCFF914GQH/@@download/ENCFF914GQH.bam 42.4 M 0 40.8 M 0.962 SE 36 36 native 0.0 M 33.7 M 32.8 M 0.774 0.97 0.98 40.87 140 1.13 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bebfc2f-2b24-4747-9611-1e030bfe3aff/@@download/cross_correlation_plot/ENCFF000CMX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATM ENCFF000CMX Illumina Genome Analyzer 2016-11-07T03:16:47.629385+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJp5003698kJz2gxb7gpFF ENCSR000ARL https://www.encodeproject.org/experiments/ENCSR000ARL "histone,histone modification,narrow histone mark" H2AFZ-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF321DLR https://www.encodeproject.org/files/ENCFF321DLR/@@download/ENCFF321DLR.bam ENCFF582MCF https://www.encodeproject.org/files/ENCFF582MCF/@@download/ENCFF582MCF.bam 42.3 M 0 41.8 M 0.988 SE 36 36 native 0.0 M 33.9 M 33.2 M 0.784 0.98 0.98 51.25 140 1.12 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/9969cbd8-f26d-4d94-b7c0-41520a67df7e/@@download/cross_correlation_plot/ENCFF000CMY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATN ENCFF000CMY Illumina Genome Analyzer 2016-11-07T03:17:49.957696+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJpB803697GFbjV1b4gVp5 ENCSR000ALK https://www.encodeproject.org/experiments/ENCSR000ALK "histone,histone modification,narrow histone mark" H3K27ac-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF578IKI https://www.encodeproject.org/files/ENCFF578IKI/@@download/ENCFF578IKI.bam ENCFF479TIB https://www.encodeproject.org/files/ENCFF479TIB/@@download/ENCFF479TIB.bam 25.5 M 0 12.0 M 0.469 SE 36 36 native 0.0 M 8.6 M 8.1 M 0.319 0.96 0.96 28.63 160 1.89 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9be483c-92ec-413b-a764-ac4b4decb19e/@@download/cross_correlation_plot/ENCFF000CNN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAS ENCFF000CNN Illumina Genome Analyzer IIx 2016-08-09T15:59:30.734551+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY8Zj0369FGGBGjG2qk10q ENCSR000ALK https://www.encodeproject.org/experiments/ENCSR000ALK "histone,histone modification,narrow histone mark" H3K27ac-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF828BCB https://www.encodeproject.org/files/ENCFF828BCB/@@download/ENCFF828BCB.bam ENCFF044MAG https://www.encodeproject.org/files/ENCFF044MAG/@@download/ENCFF044MAG.bam 11.6 M 0 9.0 M 0.772 SE 36 36 native 0.0 M 7.1 M 6.8 M 0.587 0.96 0.96 23.01 205 1.73 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/c80dc5a4-d344-4665-97d5-efe61701ad16/@@download/cross_correlation_plot/ENCFF000CNL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAT ENCFF000CNL Illumina Genome Analyzer IIe 2016-08-09T15:58:43.798745+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY8g0036927gfXkG2b307b ENCSR000ALL https://www.encodeproject.org/experiments/ENCSR000ALL "histone,histone modification,broad histone mark" H3K27me3-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF137DEJ https://www.encodeproject.org/files/ENCFF137DEJ/@@download/ENCFF137DEJ.bam ENCFF383QWX https://www.encodeproject.org/files/ENCFF383QWX/@@download/ENCFF383QWX.bam 20.2 M 0 10.8 M 0.537 SE 36 36 native 0.0 M 7.0 M 6.6 M 0.326 0.96 0.96 23.74 185 1.07 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/83c9ffa5-a0cd-445a-a6b5-83a2315131b2/@@download/cross_correlation_plot/ENCFF000CNX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGO ENCFF000CNX Illumina Genome Analyzer IIx 2016-11-07T03:09:03.006997+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKJy00369BJ3j0F430pZ51 ENCSR000ALL https://www.encodeproject.org/experiments/ENCSR000ALL "histone,histone modification,broad histone mark" H3K27me3-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF553LTL https://www.encodeproject.org/files/ENCFF553LTL/@@download/ENCFF553LTL.bam ENCFF938FRA https://www.encodeproject.org/files/ENCFF938FRA/@@download/ENCFF938FRA.bam 6.5 M 0 5.3 M 0.818 SE 36 36 native 0.0 M 4.0 M 3.8 M 0.593 0.96 0.96 27.33 225 1.05 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/84ec721e-29d1-4f4e-b72f-d4ca3e9fa965/@@download/cross_correlation_plot/ENCFF000CNO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGP ENCFF000CNO Illumina Genome Analyzer IIe 2016-11-07T03:08:32.978968+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKK2Q036963f10Qj37pkFy ENCSR000ALL https://www.encodeproject.org/experiments/ENCSR000ALL "histone,histone modification,broad histone mark" H3K27me3-human keratinocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF495QQW https://www.encodeproject.org/files/ENCFF495QQW/@@download/ENCFF495QQW.bam ENCFF868LOH https://www.encodeproject.org/files/ENCFF868LOH/@@download/ENCFF868LOH.bam 5.7 M 0 4.3 M 0.764 SE 36 36 native 0.0 M 3.0 M 2.8 M 0.504 0.96 0.96 25.28 210 1.05 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba9e4020-9c60-4661-bb12-28d15ba259d8/@@download/cross_correlation_plot/ENCFF000CNP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGQ ENCFF000CNP Illumina Genome Analyzer IIe 2016-11-07T03:08:30.821849+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKK7Q0369P0J6bFv35kB20 ENCSR000ALM https://www.encodeproject.org/experiments/ENCSR000ALM "histone,histone modification,broad histone mark" H3K36me3-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF958XEH https://www.encodeproject.org/files/ENCFF958XEH/@@download/ENCFF958XEH.bam ENCFF803DRU https://www.encodeproject.org/files/ENCFF803DRU/@@download/ENCFF803DRU.bam 22.5 M 0 10.8 M 0.480 SE 36 36 native 0.0 M 6.8 M 6.7 M 0.296 0.99 0.99 112.93 120 1.05 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ea10327-fd60-4ac4-bd68-6efdacc21fe6/@@download/cross_correlation_plot/ENCFF000COD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVV ENCFF000COD Illumina Genome Analyzer IIx 2016-11-07T03:10:22.218383+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK5Y80369B8pxyPG3K2JkK ENCSR000ALM https://www.encodeproject.org/experiments/ENCSR000ALM "histone,histone modification,broad histone mark" H3K36me3-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF606DFH https://www.encodeproject.org/files/ENCFF606DFH/@@download/ENCFF606DFH.bam ENCFF801VXY https://www.encodeproject.org/files/ENCFF801VXY/@@download/ENCFF801VXY.bam 4.2 M 0 3.4 M 0.828 SE 36 36 native 0.0 M 2.5 M 2.4 M 0.566 0.95 0.95 20.97 180 1.03 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c9d2884-0227-4075-b6a3-60ceaa754cb9/@@download/cross_correlation_plot/ENCFF000CNV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFO ENCFF000CNV Illumina Genome Analyzer IIe 2016-11-07T03:09:30.362204+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK5vQ0369BJ3j0F430pZ00 ENCSR000ALM https://www.encodeproject.org/experiments/ENCSR000ALM "histone,histone modification,broad histone mark" H3K36me3-human keratinocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF876MWV https://www.encodeproject.org/files/ENCFF876MWV/@@download/ENCFF876MWV.bam ENCFF664WUL https://www.encodeproject.org/files/ENCFF664WUL/@@download/ENCFF664WUL.bam 8.2 M 0 6.3 M 0.764 SE 36 36 native 0.0 M 4.3 M 4.2 M 0.515 0.98 0.98 51.48 210 1.02 0.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/dcee1558-a99b-4b0f-9b18-8bd5c00d5f7a/@@download/cross_correlation_plot/ENCFF000COB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFN ENCFF000COB Illumina Genome Analyzer IIe 2016-11-07T03:09:36.892853+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK64j03691p5Qf186B55v2 ENCSR000ALI https://www.encodeproject.org/experiments/ENCSR000ALI "histone,histone modification,broad histone mark" H3K4me1-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF073QJE https://www.encodeproject.org/files/ENCFF073QJE/@@download/ENCFF073QJE.bam ENCFF316XYS https://www.encodeproject.org/files/ENCFF316XYS/@@download/ENCFF316XYS.bam 24.2 M 0 13.2 M 0.545 SE 36 36 native 0.0 M 9.7 M 9.5 M 0.394 0.99 0.99 72.63 155 1.31 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/84120dc5-cf54-4364-bc96-2bd3e1a52e9a/@@download/cross_correlation_plot/ENCFF000COL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANP ENCFF000COL Illumina Genome Analyzer IIx 2016-11-07T03:13:07.187123+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK0Bj036945FQkxk8GJXXF ENCSR000ALI https://www.encodeproject.org/experiments/ENCSR000ALI "histone,histone modification,broad histone mark" H3K4me1-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF239VSG https://www.encodeproject.org/files/ENCFF239VSG/@@download/ENCFF239VSG.bam ENCFF450PAR https://www.encodeproject.org/files/ENCFF450PAR/@@download/ENCFF450PAR.bam 7.6 M 0 5.3 M 0.700 SE 36 36 native 0.0 M 4.0 M 3.9 M 0.512 0.98 0.98 40.98 210 1.25 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/3cf0f9bb-0734-4aa2-8688-90d2fb503109/@@download/cross_correlation_plot/ENCFF000COE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANN ENCFF000COE Illumina Genome Analyzer IIe 2016-11-07T03:12:02.725697+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK0XQ0369349Kqpx8PZbK3 ENCSR000ALI https://www.encodeproject.org/experiments/ENCSR000ALI "histone,histone modification,broad histone mark" H3K4me1-human keratinocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF783XXW https://www.encodeproject.org/files/ENCFF783XXW/@@download/ENCFF783XXW.bam ENCFF932JMT https://www.encodeproject.org/files/ENCFF932JMT/@@download/ENCFF932JMT.bam 8.1 M 0 6.5 M 0.793 SE 36 36 native 0.0 M 4.9 M 4.8 M 0.584 0.97 0.97 29.02 210 1.16 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/05329eae-6126-4efd-8f20-2f75ffc7c8ca/@@download/cross_correlation_plot/ENCFF000COI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANO ENCFF000COI Illumina Genome Analyzer IIe 2016-11-07T03:11:59.657442+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK0p0036941y6xk1837KKV ENCSR000ALN https://www.encodeproject.org/experiments/ENCSR000ALN "histone,histone modification,narrow histone mark" H3K4me2-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF544RYE https://www.encodeproject.org/files/ENCFF544RYE/@@download/ENCFF544RYE.bam ENCFF863MBR https://www.encodeproject.org/files/ENCFF863MBR/@@download/ENCFF863MBR.bam 6.1 M 0 5.2 M 0.852 SE 36 36 native 0.0 M 4.1 M 3.9 M 0.646 0.96 0.96 24.46 215 1.34 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/88897b98-cb7f-448f-b84e-cfdc97100b92/@@download/cross_correlation_plot/ENCFF000COM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGR ENCFF000COM Illumina Genome Analyzer IIe 2016-11-13T00:45:59.216337+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygb2Q03694p2jjB4qqvk5f ENCSR000ALN https://www.encodeproject.org/experiments/ENCSR000ALN "histone,histone modification,narrow histone mark" H3K4me2-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF255OEP https://www.encodeproject.org/files/ENCFF255OEP/@@download/ENCFF255OEP.bam ENCFF867ZHA https://www.encodeproject.org/files/ENCFF867ZHA/@@download/ENCFF867ZHA.bam 23.7 M 0 13.0 M 0.546 SE 36 36 native 0.0 M 9.5 M 9.3 M 0.390 0.98 0.98 47.69 155 1.54 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/80dc677c-3d0d-4730-b186-d17a22d4afce/@@download/cross_correlation_plot/ENCFF000COT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABB ENCFF000COT Illumina Genome Analyzer IIx 2016-11-13T03:37:16.719934+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygb6j03698PxP1Qj6z9Zj9 ENCSR000ALN https://www.encodeproject.org/experiments/ENCSR000ALN "histone,histone modification,narrow histone mark" H3K4me2-human keratinocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF966NHW https://www.encodeproject.org/files/ENCFF966NHW/@@download/ENCFF966NHW.bam ENCFF435QAE https://www.encodeproject.org/files/ENCFF435QAE/@@download/ENCFF435QAE.bam 7.6 M 0 6.2 M 0.822 SE 36 36 native 0.0 M 5.1 M 4.9 M 0.650 0.98 0.98 42.51 215 1.46 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a15d9ec-810e-480d-bfa3-38f95d1681a9/@@download/cross_correlation_plot/ENCFF000COR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABC ENCFF000COR Illumina Genome Analyzer IIe 2016-11-13T00:46:04.000852+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgbF803697qX9798yZFPKb ENCSR000ALO https://www.encodeproject.org/experiments/ENCSR000ALO "histone,histone modification,narrow histone mark" H3K4me3-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF730CVD https://www.encodeproject.org/files/ENCFF730CVD/@@download/ENCFF730CVD.bam ENCFF729OUT https://www.encodeproject.org/files/ENCFF729OUT/@@download/ENCFF729OUT.bam 20.9 M 0 10.7 M 0.514 SE 36 36 native 0.0 M 7.4 M 7.1 M 0.341 0.97 0.97 33.57 140 1.80 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/17881619-79e8-428c-8f8a-c2e798efcd06/@@download/cross_correlation_plot/ENCFF000CPA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEE ENCFF000CPA Illumina Genome Analyzer IIx 2016-08-20T04:08:48.087816+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byqp8g003696z0JG3j3Pqb3f ENCSR000ALO https://www.encodeproject.org/experiments/ENCSR000ALO "histone,histone modification,narrow histone mark" H3K4me3-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF003UPA https://www.encodeproject.org/files/ENCFF003UPA/@@download/ENCFF003UPA.bam ENCFF490EKC https://www.encodeproject.org/files/ENCFF490EKC/@@download/ENCFF490EKC.bam 7.1 M 0 6.1 M 0.860 SE 36 36 native 0.0 M 4.5 M 4.4 M 0.618 0.97 0.97 37.47 190 1.24 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/80909fa7-e540-477d-bca4-c5a8b1b905bf/@@download/cross_correlation_plot/ENCFF000COU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEG ENCFF000COU Illumina Genome Analyzer IIe 2016-08-20T04:08:18.780358+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byqp8kQ03692BQgFKG75j87V ENCSR000ALO https://www.encodeproject.org/experiments/ENCSR000ALO "histone,histone modification,narrow histone mark" H3K4me3-human keratinocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF414VCA https://www.encodeproject.org/files/ENCFF414VCA/@@download/ENCFF414VCA.bam ENCFF414HZI https://www.encodeproject.org/files/ENCFF414HZI/@@download/ENCFF414HZI.bam 6.3 M 0 4.9 M 0.776 SE 36 36 native 0.0 M 3.5 M 3.0 M 0.480 0.88 0.88 8.78 190 1.11 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed43d65a-c8f7-4e29-9936-78119a78897f/@@download/cross_correlation_plot/ENCFF000COV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEF ENCFF000COV Illumina Genome Analyzer IIe 2016-08-20T04:08:44.569038+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byqp8qj0369BxVjp8xpP8609 ENCSR970FPM https://www.encodeproject.org/experiments/ENCSR970FPM "histone,histone modification,narrow histone mark" H3K4me3-human keratinocyte primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF197YXQ https://www.encodeproject.org/files/ENCFF197YXQ/@@download/ENCFF197YXQ.bam ENCFF995QKC https://www.encodeproject.org/files/ENCFF995QKC/@@download/ENCFF995QKC.bam 27.4 M 0 26.7 M 0.972 SE 36 36 36 0.0 M 21.1 M 19.2 M 0.701 0.95 0.95 20.38 205 1.28 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3aa9c69-8952-47b1-bc51-d66e9349a7d1/@@download/cross_correlation_plot/ENCFF774JBP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB550PWQ bradley-bernstein:DNA_Lib 4582 ENCFF774JBP HiSeq 2500 2016-08-09T16:49:08.989707+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0g0j1803696PJkZG0kBg11Y ENCSR970FPM https://www.encodeproject.org/experiments/ENCSR970FPM "histone,histone modification,narrow histone mark" H3K4me3-human keratinocyte primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF153YLS https://www.encodeproject.org/files/ENCFF153YLS/@@download/ENCFF153YLS.bam ENCFF757KSE https://www.encodeproject.org/files/ENCFF757KSE/@@download/ENCFF757KSE.bam 36.2 M 0 35.4 M 0.978 SE 76 36 36 0.0 M 27.5 M 21.8 M 0.602 0.79 0.79 4.44 180 1.08 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f6f6480-9abe-4641-9ad3-26c49cb67a9d/@@download/cross_correlation_plot/ENCFF259YKX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB883AHC bradley-bernstein:DNA_Lib 6091 ENCFF259YKX HiSeq 2000 2016-08-09T22:39:47.356646+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0g0j680369JPBYk4Gk5Zxg3 ENCSR000ARM https://www.encodeproject.org/experiments/ENCSR000ARM "histone,histone modification,broad histone mark" H3K79me2-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF451OBK https://www.encodeproject.org/files/ENCFF451OBK/@@download/ENCFF451OBK.bam ENCFF910REZ https://www.encodeproject.org/files/ENCFF910REZ/@@download/ENCFF910REZ.bam 41.9 M 0 40.9 M 0.976 SE 36 36 native 0.0 M 32.1 M 30.2 M 0.720 0.94 0.95 18.79 130 1.16 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/677470cb-5f4f-4de7-9904-965139241c6d/@@download/cross_correlation_plot/ENCFF000CPH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOJ ENCFF000CPH Illumina Genome Analyzer IIx 2016-11-07T03:10:10.249990+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKF7j03691x36xYG9qv7J0 ENCSR000ARM https://www.encodeproject.org/experiments/ENCSR000ARM "histone,histone modification,broad histone mark" H3K79me2-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF382EOW https://www.encodeproject.org/files/ENCFF382EOW/@@download/ENCFF382EOW.bam ENCFF676ABL https://www.encodeproject.org/files/ENCFF676ABL/@@download/ENCFF676ABL.bam 40.6 M 0 40.0 M 0.987 SE 36 36 native 0.0 M 31.0 M 29.6 M 0.730 0.96 0.96 24.65 130 1.12 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2a1178f-f5f4-4632-a7c0-f684f08b9c15/@@download/cross_correlation_plot/ENCFF000CPF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOI ENCFF000CPF Illumina Genome Analyzer IIx 2016-11-07T03:10:23.271036+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKFJ00369BJ3j0F430pZ3B ENCSR000ALP https://www.encodeproject.org/experiments/ENCSR000ALP "histone,histone modification,narrow histone mark" H3K9ac-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF985AQF https://www.encodeproject.org/files/ENCFF985AQF/@@download/ENCFF985AQF.bam ENCFF262FYS https://www.encodeproject.org/files/ENCFF262FYS/@@download/ENCFF262FYS.bam 19.5 M 0 9.6 M 0.490 SE 36 36 native 0.0 M 6.7 M 6.3 M 0.321 0.95 0.95 20.96 125 1.91 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0b5e326-10df-4894-8e7e-0dce2e4018a9/@@download/cross_correlation_plot/ENCFF000CPP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMF ENCFF000CPP Illumina Genome Analyzer IIx 2016-11-07T03:17:23.575796+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJfJ803696QVKGb5b18226 ENCSR000ALP https://www.encodeproject.org/experiments/ENCSR000ALP "histone,histone modification,narrow histone mark" H3K9ac-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF058RAK https://www.encodeproject.org/files/ENCFF058RAK/@@download/ENCFF058RAK.bam ENCFF240RRS https://www.encodeproject.org/files/ENCFF240RRS/@@download/ENCFF240RRS.bam 10.5 M 0 7.5 M 0.716 SE 36 36 native 0.0 M 6.0 M 5.6 M 0.535 0.94 0.94 15.58 220 1.93 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5e4f105-000e-49e9-baf7-92206e9781b0/@@download/cross_correlation_plot/ENCFF000CPM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMG ENCFF000CPM Illumina Genome Analyzer IIe 2016-11-07T03:16:22.078728+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJfXj03696QVKGb5b1822Q ENCSR000ALP https://www.encodeproject.org/experiments/ENCSR000ALP "histone,histone modification,narrow histone mark" H3K9ac-human keratinocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF989XDU https://www.encodeproject.org/files/ENCFF989XDU/@@download/ENCFF989XDU.bam ENCFF756EWY https://www.encodeproject.org/files/ENCFF756EWY/@@download/ENCFF756EWY.bam 7.1 M 0 5.3 M 0.755 SE 36 36 native 0.0 M 4.1 M 3.9 M 0.545 0.93 0.93 14.33 235 1.69 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/46f617bf-ee90-4340-b49d-2fd552971afe/@@download/cross_correlation_plot/ENCFF000CPJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMH ENCFF000CPJ Illumina Genome Analyzer IIe 2016-11-07T03:16:04.287137+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJfgj0369F4g82fJbGXYGJ ENCSR000ALQ https://www.encodeproject.org/experiments/ENCSR000ALQ "histone,histone modification,broad histone mark" H3K9me1-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF790GWQ https://www.encodeproject.org/files/ENCFF790GWQ/@@download/ENCFF790GWQ.bam ENCFF544UIQ https://www.encodeproject.org/files/ENCFF544UIQ/@@download/ENCFF544UIQ.bam 25.8 M 0 14.5 M 0.562 SE 36 36 native 0.0 M 9.9 M 9.6 M 0.373 0.98 0.98 48.06 120 1.02 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fad63ca-5f94-458b-95f5-2aaa7b0ee1ea/@@download/cross_correlation_plot/ENCFF000CPY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AME ENCFF000CPY Illumina Genome Analyzer IIx 2016-11-07T03:10:12.640376+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK6Gj0369BJ3j0F430pZ0F ENCSR000ALQ https://www.encodeproject.org/experiments/ENCSR000ALQ "histone,histone modification,broad histone mark" H3K9me1-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF434DMY https://www.encodeproject.org/files/ENCFF434DMY/@@download/ENCFF434DMY.bam ENCFF751MQD https://www.encodeproject.org/files/ENCFF751MQD/@@download/ENCFF751MQD.bam 7.3 M 0 4.8 M 0.655 SE 36 36 native 0.0 M 3.5 M 3.3 M 0.446 0.92 0.92 12.42 195 1.05 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ee4a568-4514-4822-86b7-0da8210348bf/@@download/cross_correlation_plot/ENCFF000CPU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASD ENCFF000CPU Illumina Genome Analyzer IIe 2016-11-07T03:09:16.710291+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK6Z80369B8pxyPG3K2Jky ENCSR000ALQ https://www.encodeproject.org/experiments/ENCSR000ALQ "histone,histone modification,broad histone mark" H3K9me1-human keratinocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF496NHS https://www.encodeproject.org/files/ENCFF496NHS/@@download/ENCFF496NHS.bam ENCFF978KMO https://www.encodeproject.org/files/ENCFF978KMO/@@download/ENCFF978KMO.bam 8.4 M 0 6.7 M 0.794 SE 36 36 native 0.0 M 4.8 M 4.6 M 0.551 0.97 0.97 34.21 195 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/4bf3855c-a076-4be0-86e6-cdf976bbaabb/@@download/cross_correlation_plot/ENCFF000CPV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALD ENCFF000CPV Illumina Genome Analyzer IIe 2016-11-07T03:09:21.845800+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK888036963f10Qj37pk6b ENCSR000ARN https://www.encodeproject.org/experiments/ENCSR000ARN "histone,histone modification,broad histone mark" H3K9me3-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF398VYS https://www.encodeproject.org/files/ENCFF398VYS/@@download/ENCFF398VYS.bam ENCFF336KRI https://www.encodeproject.org/files/ENCFF336KRI/@@download/ENCFF336KRI.bam 40.0 M 0 38.5 M 0.963 SE 36 36 native 0.0 M 24.4 M 23.9 M 0.598 0.98 0.98 56.50 135 1.02 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/efb08e37-236e-40f4-9ccd-a3e9947e9103/@@download/cross_correlation_plot/ENCFF000CND.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARZ ENCFF000CND Illumina Genome Analyzer IIx 2016-11-07T03:09:45.566415+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKKQ80369JF07kGZ35f3KG ENCSR000ARN https://www.encodeproject.org/experiments/ENCSR000ARN "histone,histone modification,broad histone mark" H3K9me3-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF973LYM https://www.encodeproject.org/files/ENCFF973LYM/@@download/ENCFF973LYM.bam ENCFF769QWY https://www.encodeproject.org/files/ENCFF769QWY/@@download/ENCFF769QWY.bam 41.5 M 0 40.5 M 0.975 SE 36 36 native 0.0 M 23.6 M 23.1 M 0.557 0.98 0.98 52.61 140 1.04 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/e55af044-39ed-4be2-a1fa-c258b70b2219/@@download/cross_correlation_plot/ENCFF000CNG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASA ENCFF000CNG Illumina Genome Analyzer IIx 2016-11-07T03:10:20.889618+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Pbzkj03696QVKGb5b184Gj ENCSR000ALR https://www.encodeproject.org/experiments/ENCSR000ALR "histone,histone modification,broad histone mark" H4K20me1-human keratinocyte primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF299UMH https://www.encodeproject.org/files/ENCFF299UMH/@@download/ENCFF299UMH.bam ENCFF551CCQ https://www.encodeproject.org/files/ENCFF551CCQ/@@download/ENCFF551CCQ.bam 27.1 M 0 10.3 M 0.379 SE 36 36 native 0.0 M 6.1 M 6.0 M 0.223 1.00 1.00 212.40 145 1.02 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/421ab49c-feba-4207-97f7-a69a047db30f/@@download/cross_correlation_plot/ENCFF000CQG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACG ENCFF000CQG Illumina Genome Analyzer IIx 2016-11-07T03:09:38.959123+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKBf8036945FQkxk8GJXfP ENCSR000ALR https://www.encodeproject.org/experiments/ENCSR000ALR "histone,histone modification,broad histone mark" H4K20me1-human keratinocyte primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF793XXV https://www.encodeproject.org/files/ENCFF793XXV/@@download/ENCFF793XXV.bam ENCFF643FWC https://www.encodeproject.org/files/ENCFF643FWC/@@download/ENCFF643FWC.bam 11.1 M 0 8.5 M 0.768 SE 36 36 native 0.0 M 6.1 M 5.9 M 0.533 0.98 0.98 41.83 200 1.03 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/d005358c-f66e-4078-a94f-529431ed5a9b/@@download/cross_correlation_plot/ENCFF000CQD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACI ENCFF000CQD Illumina Genome Analyzer IIe 2016-11-07T03:09:04.101700+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKBv8036963f10Qj37pk8x ENCSR000ALR https://www.encodeproject.org/experiments/ENCSR000ALR "histone,histone modification,broad histone mark" H4K20me1-human keratinocyte primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF195AJQ https://www.encodeproject.org/files/ENCFF195AJQ/@@download/ENCFF195AJQ.bam ENCFF127UNE https://www.encodeproject.org/files/ENCFF127UNE/@@download/ENCFF127UNE.bam 5.6 M 0 4.7 M 0.839 SE 36 36 native 0.0 M 3.4 M 3.3 M 0.585 0.96 0.96 27.67 60 1.02 0.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ccf3c58-9355-4f05-8c4b-9305ca5cb3b3/@@download/cross_correlation_plot/ENCFF000CPX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACH ENCFF000CPX Illumina Genome Analyzer IIe 2016-11-07T03:08:45.806317+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKF1j0369BJ3j0F430pZ2Z ENCSR720GSE https://www.encodeproject.org/experiments/ENCSR720GSE control Control-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF387DQY https://www.encodeproject.org/files/ENCFF387DQY/@@download/ENCFF387DQY.bam ENCFF615KTD https://www.encodeproject.org/files/ENCFF615KTD/@@download/ENCFF615KTD.bam 79.3 M 0 77.4 M 0.975 SE 76 36 36 0.0 M 58.5 M 55.7 M 0.702 0.95 0.95 21.05 180 1.01 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/b0d281d5-01cc-489f-8669-b791fe8798c9/@@download/cross_correlation_plot/ENCFF218VYP-ENCFF130NIU-ENCFF411REJ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB265LEA bradley-bernstein:DNA_Lib 6107 "ENCFF411REJ,ENCFF218VYP,ENCFF130NIU" HiSeq 2500 2017-03-17T01:56:30.272549+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35QQK00369PbZvGJgvgXpj0 ENCSR720GSE https://www.encodeproject.org/experiments/ENCSR720GSE control Control-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF907MVA https://www.encodeproject.org/files/ENCFF907MVA/@@download/ENCFF907MVA.bam ENCFF615KTD https://www.encodeproject.org/files/ENCFF615KTD/@@download/ENCFF615KTD.bam 79.3 M 0 76.5 M 0.964 SE 76 76 native 0.0 M 66.5 M 63.2 M 0.796 0.96 0.96 22.55 165 1.01 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/4cf2156f-1e94-4f71-b743-a8d2a56cdfa7/@@download/cross_correlation_plot/ENCFF218VYP-ENCFF130NIU-ENCFF411REJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB265LEA bradley-bernstein:DNA_Lib 6107 "ENCFF411REJ,ENCFF218VYP,ENCFF130NIU" HiSeq 2500 2016-10-29T04:45:52.186312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09x5k00369BgF5f15PFG1KQ ENCSR720GSE https://www.encodeproject.org/experiments/ENCSR720GSE control Control-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF239QTJ https://www.encodeproject.org/files/ENCFF239QTJ/@@download/ENCFF239QTJ.bam ENCFF343JMR https://www.encodeproject.org/files/ENCFF343JMR/@@download/ENCFF343JMR.bam 70.1 M 0 69.0 M 0.984 SE 76 36 36 0.0 M 53.2 M 48.0 M 0.685 0.90 0.90 10.12 200 1.01 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/5eb06ad1-893d-4d5d-8be7-d570c4f95fad/@@download/cross_correlation_plot/ENCFF303RYF-ENCFF324AOR-ENCFF337HED_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB995ZFR bradley-bernstein:DNA_Lib 7020 "ENCFF324AOR,ENCFF303RYF,ENCFF337HED" HiSeq 2500 2017-03-17T01:17:07.074758+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35QQbQ0369PbZvGJgvgXpjB ENCSR720GSE https://www.encodeproject.org/experiments/ENCSR720GSE control Control-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF617REL https://www.encodeproject.org/files/ENCFF617REL/@@download/ENCFF617REL.bam ENCFF343JMR https://www.encodeproject.org/files/ENCFF343JMR/@@download/ENCFF343JMR.bam 70.1 M 0 68.0 M 0.969 SE 76 76 native 0.0 M 59.8 M 53.9 M 0.769 0.90 0.90 10.23 195 1.01 4.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/35c6bcdf-3556-4c03-82de-899360558f37/@@download/cross_correlation_plot/ENCFF303RYF-ENCFF324AOR-ENCFF337HED_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB995ZFR bradley-bernstein:DNA_Lib 7020 "ENCFF324AOR,ENCFF303RYF,ENCFF337HED" HiSeq 2500 2016-10-29T04:25:06.187409+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09vFK00369J70k2QVF5F1gg ENCSR425LSX https://www.encodeproject.org/experiments/ENCSR425LSX "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human KMS-11 immortalized cell line bradley-bernstein ENCODE3 pending "SE,PE" 76 HiSeq 2500 processing ENCSR499RMZ https://www.encodeproject.org/experiments/ENCSR499RMZ "histone,histone modification,narrow histone mark" H2AFZ-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF085XNP https://www.encodeproject.org/files/ENCFF085XNP/@@download/ENCFF085XNP.bam ENCFF093QRJ https://www.encodeproject.org/files/ENCFF093QRJ/@@download/ENCFF093QRJ.bam 39.6 M 0 38.5 M 0.971 SE 76 76 native 0.0 M 33.9 M 32.6 M 0.822 0.97 0.97 32.33 225 1.06 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/55f73f5d-9508-4f56-8729-2866e34555b7/@@download/cross_correlation_plot/ENCFF190TVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB832BZH bradley-bernstein:DNA_Lib 6117 ENCFF190TVN HiSeq 2500 2016-10-29T04:44:39.332605+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09x5vj0369JYX7855VG0Ggq ENCSR499RMZ https://www.encodeproject.org/experiments/ENCSR499RMZ "histone,histone modification,narrow histone mark" H2AFZ-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF738EKC https://www.encodeproject.org/files/ENCFF738EKC/@@download/ENCFF738EKC.bam ENCFF399VTW https://www.encodeproject.org/files/ENCFF399VTW/@@download/ENCFF399VTW.bam 24.3 M 0 23.0 M 0.946 SE 76 76 native 0.0 M 20.3 M 19.0 M 0.781 0.94 0.94 15.27 215 1.03 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/3752fe69-d28e-4124-9b34-0e7664be4180/@@download/cross_correlation_plot/ENCFF797JMD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB021LXI bradley-bernstein:DNA_Lib 6969 ENCFF797JMD HiSeq 2500 2016-10-29T04:22:54.811482+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09vFk803691jJ0BZ9F1B4gV ENCSR955IXZ https://www.encodeproject.org/experiments/ENCSR955IXZ "histone,histone modification,narrow histone mark" H3K27ac-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF820EBJ https://www.encodeproject.org/files/ENCFF820EBJ/@@download/ENCFF820EBJ.bam ENCFF146AUT https://www.encodeproject.org/files/ENCFF146AUT/@@download/ENCFF146AUT.bam 65.8 M 0 61.6 M 0.936 SE 76 76 native 0.0 M 55.3 M 49.1 M 0.746 0.90 0.90 10.94 210 1.16 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/89e38a2b-4615-40ce-be8c-80767d0fd82b/@@download/cross_correlation_plot/ENCFF631XET-ENCFF075DLG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB562GLZ bradley-bernstein:DNA_Lib 6112 "ENCFF075DLG,ENCFF631XET" HiSeq 2500 2016-10-29T04:49:49.930846+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09x6K003698B80B4kPK2021 ENCSR955IXZ https://www.encodeproject.org/experiments/ENCSR955IXZ "histone,histone modification,narrow histone mark" H3K27ac-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF607VEF https://www.encodeproject.org/files/ENCFF607VEF/@@download/ENCFF607VEF.bam ENCFF190RKM https://www.encodeproject.org/files/ENCFF190RKM/@@download/ENCFF190RKM.bam 72.6 M 0 69.7 M 0.961 SE 76 76 native 0.0 M 62.0 M 50.7 M 0.699 0.82 0.81 5.24 205 1.05 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff787d00-b836-4927-a50c-202f9e4b3afb/@@download/cross_correlation_plot/ENCFF931NFG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB067SIE bradley-bernstein:DNA_Lib 6965 ENCFF931NFG HiSeq 2500 2016-10-29T04:26:03.518165+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09vG5003691jJ0BZ9F1B4gk ENCSR474VGQ https://www.encodeproject.org/experiments/ENCSR474VGQ "histone,histone modification,broad histone mark" H3K27me3-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF891YVY https://www.encodeproject.org/files/ENCFF891YVY/@@download/ENCFF891YVY.bam ENCFF823ESX https://www.encodeproject.org/files/ENCFF823ESX/@@download/ENCFF823ESX.bam 36.2 M 0 32.2 M 0.890 SE 76 76 native 0.0 M 25.9 M 14.2 M 0.392 0.63 0.65 3.12 190 1.03 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/109aff9e-c512-4cdc-9973-f90ccf7e3040/@@download/cross_correlation_plot/ENCFF199JVE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB057HBI bradley-bernstein:DNA_Lib 6111 ENCFF199JVE HiSeq 2500 2017-01-14T03:56:35.744942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vZqQ80369Gbf610XY85Gp9 ENCSR474VGQ https://www.encodeproject.org/experiments/ENCSR474VGQ "histone,histone modification,broad histone mark" H3K27me3-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF283SMP https://www.encodeproject.org/files/ENCFF283SMP/@@download/ENCFF283SMP.bam ENCFF702DXK https://www.encodeproject.org/files/ENCFF702DXK/@@download/ENCFF702DXK.bam 51.4 M 0 50.3 M 0.980 SE 76 76 native 0.0 M 43.8 M 39.8 M 0.774 0.91 0.91 10.77 150 1.01 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/684c7cc7-1b39-4258-be2c-d51d01dab44e/@@download/cross_correlation_plot/ENCFF451VPP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB047HAU bradley-bernstein:DNA_Lib 7216 ENCFF451VPP HiSeq 2500 2016-10-29T04:27:06.182295+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vZqf803695Ykp30Xpy8gx3 ENCSR835YBD https://www.encodeproject.org/experiments/ENCSR835YBD "histone,histone modification,broad histone mark" H3K36me3-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF937LHZ https://www.encodeproject.org/files/ENCFF937LHZ/@@download/ENCFF937LHZ.bam ENCFF339GXN https://www.encodeproject.org/files/ENCFF339GXN/@@download/ENCFF339GXN.bam 27.0 M 0 26.3 M 0.974 SE 76 76 native 0.0 M 22.9 M 22.0 M 0.814 0.97 0.97 30.32 210 1.01 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1eb137b-c374-46c8-b05f-de144237c8ba/@@download/cross_correlation_plot/ENCFF717MKY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB241KFU bradley-bernstein:DNA_Lib 6113 ENCFF717MKY HiSeq 2500 2016-10-29T04:49:16.157654+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09x888036913377YJjkvPpf ENCSR835YBD https://www.encodeproject.org/experiments/ENCSR835YBD "histone,histone modification,broad histone mark" H3K36me3-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF600KNO https://www.encodeproject.org/files/ENCFF600KNO/@@download/ENCFF600KNO.bam ENCFF781QYY https://www.encodeproject.org/files/ENCFF781QYY/@@download/ENCFF781QYY.bam 26.0 M 0 24.8 M 0.954 SE 76 76 native 0.0 M 21.8 M 19.0 M 0.729 0.87 0.87 7.31 175 1.02 2.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8525c5b-2520-4f1c-be4f-e09a327818a6/@@download/cross_correlation_plot/ENCFF253BOW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB351BJB bradley-bernstein:DNA_Lib 6966 ENCFF253BOW HiSeq 2500 2016-10-29T04:25:16.807197+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09vJK00369BX1xqb1B818J4 ENCSR976JHS https://www.encodeproject.org/experiments/ENCSR976JHS "histone,histone modification,broad histone mark" H3K4me1-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF149PZR https://www.encodeproject.org/files/ENCFF149PZR/@@download/ENCFF149PZR.bam ENCFF458KWC https://www.encodeproject.org/files/ENCFF458KWC/@@download/ENCFF458KWC.bam 71.8 M 0 67.0 M 0.933 SE 76 76 native 0.0 M 60.0 M 54.2 M 0.755 0.91 0.91 11.51 205 1.04 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f44cbb8-0953-4a03-937f-6834bef34d04/@@download/cross_correlation_plot/ENCFF167NLZ-ENCFF362KNB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB901WMW bradley-bernstein:DNA_Lib 6108 "ENCFF362KNB,ENCFF167NLZ" HiSeq 2500 2016-10-29T04:51:33.002721+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09x8gQ03691jJ0BZ9F1B4y5 ENCSR976JHS https://www.encodeproject.org/experiments/ENCSR976JHS "histone,histone modification,broad histone mark" H3K4me1-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF577PBC https://www.encodeproject.org/files/ENCFF577PBC/@@download/ENCFF577PBC.bam ENCFF548VFU https://www.encodeproject.org/files/ENCFF548VFU/@@download/ENCFF548VFU.bam 94.3 M 0 89.8 M 0.952 SE 76 76 native 0.0 M 80.7 M 40.1 M 0.425 0.50 0.45 1.58 180 1.05 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/d58e1578-7c53-4e28-bd32-d54f6379a8bd/@@download/cross_correlation_plot/ENCFF491RBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB424YQO bradley-bernstein:DNA_Lib 6962 ENCFF491RBF HiSeq 2500 2016-10-29T04:27:40.842202+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09vJp003699VK2qfkF2b3Zz ENCSR806XIU https://www.encodeproject.org/experiments/ENCSR806XIU "histone,histone modification,narrow histone mark" H3K4me2-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF373GWD https://www.encodeproject.org/files/ENCFF373GWD/@@download/ENCFF373GWD.bam ENCFF564HQR https://www.encodeproject.org/files/ENCFF564HQR/@@download/ENCFF564HQR.bam 16.3 M 0 16.1 M 0.990 SE 76 76 native 0.0 M 14.6 M 14.0 M 0.859 0.96 0.96 27.67 220 1.09 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/3057c18b-5aa0-4a94-914e-d9de1f7d4221/@@download/cross_correlation_plot/ENCFF791PKK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB864LTO bradley-bernstein:DNA_Lib 6109 ENCFF791PKK HiSeq 2500 2016-11-25T07:42:56.578381+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qpvX803692k1PXjJQV39fj ENCSR806XIU https://www.encodeproject.org/experiments/ENCSR806XIU "histone,histone modification,narrow histone mark" H3K4me2-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF693KMG https://www.encodeproject.org/files/ENCFF693KMG/@@download/ENCFF693KMG.bam ENCFF515AFI https://www.encodeproject.org/files/ENCFF515AFI/@@download/ENCFF515AFI.bam 44.3 M 0 41.4 M 0.936 SE 76 76 native 0.0 M 36.8 M 32.5 M 0.735 0.88 0.88 8.32 200 1.04 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b95bf9a-f28e-4233-aab8-46ca8be5ebda/@@download/cross_correlation_plot/ENCFF900VEU-ENCFF714UEL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB992TPA bradley-bernstein:DNA_Lib 6963 "ENCFF900VEU,ENCFF714UEL" HiSeq 2500 2016-11-25T03:07:06.791185+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQk7j03693q3XFPQy0v99X ENCSR539TKY https://www.encodeproject.org/experiments/ENCSR539TKY "histone,histone modification,narrow histone mark" H3K4me3-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF362MMY https://www.encodeproject.org/files/ENCFF362MMY/@@download/ENCFF362MMY.bam ENCFF250UAO https://www.encodeproject.org/files/ENCFF250UAO/@@download/ENCFF250UAO.bam 16.2 M 0 16.1 M 0.992 SE 76 36 36 0.0 M 12.7 M 12.2 M 0.751 0.96 0.96 24.18 195 1.05 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/62dd14ff-bba2-4c44-b754-3717460838fa/@@download/cross_correlation_plot/ENCFF166BVX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB583RQS bradley-bernstein:DNA_Lib 6110 ENCFF166BVX HiSeq 2500 2017-03-20T17:14:36.694209+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F37zp2Q03698BYYJ3QXxqFj9 ENCSR539TKY https://www.encodeproject.org/experiments/ENCSR539TKY "histone,histone modification,narrow histone mark" H3K4me3-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF077LQW https://www.encodeproject.org/files/ENCFF077LQW/@@download/ENCFF077LQW.bam ENCFF469LCG https://www.encodeproject.org/files/ENCFF469LCG/@@download/ENCFF469LCG.bam 23.3 M 0 22.9 M 0.984 SE 36 36 36 0.0 M 17.2 M 16.9 M 0.725 0.98 0.98 63.26 285 1.04 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/03abffe2-69fb-4868-8286-5411b817f24c/@@download/cross_correlation_plot/ENCFF756KJS-ENCFF295XWS_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB408MHV bradley-bernstein:DNA_Lib 6808 "ENCFF295XWS,ENCFF756KJS" HiSeq 2500 2017-03-20T17:36:45.122466+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F37zp5Q0369J82kpJg2qJXX5 ENCSR847UJW https://www.encodeproject.org/experiments/ENCSR847UJW "histone,histone modification,broad histone mark" H3K79me2-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF616LTP https://www.encodeproject.org/files/ENCFF616LTP/@@download/ENCFF616LTP.bam ENCFF363QDJ https://www.encodeproject.org/files/ENCFF363QDJ/@@download/ENCFF363QDJ.bam 30.8 M 0 29.9 M 0.969 SE 76 76 native 0.0 M 26.5 M 25.3 M 0.822 0.96 0.96 27.86 190 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/70d9a76c-bf24-4410-8dab-223d26d3322d/@@download/cross_correlation_plot/ENCFF414DOE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB758NJS bradley-bernstein:DNA_Lib 6118 ENCFF414DOE HiSeq 2500 2016-10-29T04:51:09.232743+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xBQj03691jJ0BZ9F1B4yY ENCSR847UJW https://www.encodeproject.org/experiments/ENCSR847UJW "histone,histone modification,broad histone mark" H3K79me2-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF632UEX https://www.encodeproject.org/files/ENCFF632UEX/@@download/ENCFF632UEX.bam ENCFF400BZQ https://www.encodeproject.org/files/ENCFF400BZQ/@@download/ENCFF400BZQ.bam 45.3 M 0 44.3 M 0.977 SE 76 76 native 0.0 M 39.2 M 35.4 M 0.781 0.90 0.90 10.27 270 1.01 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c56839c-3685-4726-a86f-de7a267e2705/@@download/cross_correlation_plot/ENCFF952VYU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB482WWW bradley-bernstein:DNA_Lib 6970 ENCFF952VYU HiSeq 2500 2016-10-29T04:25:38.893971+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09vK600369FvKVQXxFJk80z ENCSR521AIV https://www.encodeproject.org/experiments/ENCSR521AIV "histone,histone modification,narrow histone mark" H3K9ac-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF489OKD https://www.encodeproject.org/files/ENCFF489OKD/@@download/ENCFF489OKD.bam ENCFF561OBP https://www.encodeproject.org/files/ENCFF561OBP/@@download/ENCFF561OBP.bam 32.6 M 0 31.6 M 0.969 SE 76 76 native 0.0 M 28.1 M 26.1 M 0.800 0.94 0.94 18.22 230 1.19 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/218f1a59-8360-408c-9e3e-37df66056e1e/@@download/cross_correlation_plot/ENCFF088LQB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB881BKR bradley-bernstein:DNA_Lib 6116 ENCFF088LQB HiSeq 2500 2016-10-29T04:48:17.739312+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09x6jQ0369668063VP6bf62 ENCSR521AIV https://www.encodeproject.org/experiments/ENCSR521AIV "histone,histone modification,narrow histone mark" H3K9ac-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF500IQP https://www.encodeproject.org/files/ENCFF500IQP/@@download/ENCFF500IQP.bam ENCFF147RIR https://www.encodeproject.org/files/ENCFF147RIR/@@download/ENCFF147RIR.bam 31.9 M 0 30.0 M 0.941 SE 76 76 native 0.0 M 26.5 M 23.0 M 0.719 0.87 0.86 7.16 210 1.03 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/31838858-079f-4ece-9103-ae66d247b7d9/@@download/cross_correlation_plot/ENCFF925DFL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB766GNA bradley-bernstein:DNA_Lib 6968 ENCFF925DFL HiSeq 2500 2016-10-29T04:24:51.941339+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09vGX00369KPb3j15B4q80K ENCSR900DFO https://www.encodeproject.org/experiments/ENCSR900DFO "histone,histone modification,broad histone mark" H3K9me2-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF327BQP https://www.encodeproject.org/files/ENCFF327BQP/@@download/ENCFF327BQP.bam ENCFF844XER https://www.encodeproject.org/files/ENCFF844XER/@@download/ENCFF844XER.bam 21.1 M 0 20.9 M 0.991 SE 76 76 native 0.0 M 18.8 M 18.3 M 0.868 0.98 0.98 39.96 160 1.01 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/20e98254-e413-4e6c-9b64-c386007e0cdc/@@download/cross_correlation_plot/ENCFF736LVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB156PCC bradley-bernstein:DNA_Lib 6733 ENCFF736LVP HiSeq 2500 2017-01-24T02:48:59.849406+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F232JVQ0369PXPkQ8y3xzZ3G ENCSR900DFO https://www.encodeproject.org/experiments/ENCSR900DFO "histone,histone modification,broad histone mark" H3K9me2-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF479RTB https://www.encodeproject.org/files/ENCFF479RTB/@@download/ENCFF479RTB.bam 21.6 M 0 21.4 M 0.988 SE 76 76 native 0.0 M 19.4 M 17.5 M 0.809 0.92 0.92 12.33 165 1.01 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e235543-d82c-4723-ae16-531c95d1d583/@@download/cross_correlation_plot/ENCFF972GKK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB503ZEM bradley-bernstein:DNA_Lib 6122 ENCFF972GKK HiSeq 2500 2017-01-24T23:01:23.062466+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F232Jfj03695F81x8Qz8jj7P ENCSR619OQS https://www.encodeproject.org/experiments/ENCSR619OQS "histone,histone modification,broad histone mark" H3K9me3-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF901QYM https://www.encodeproject.org/files/ENCFF901QYM/@@download/ENCFF901QYM.bam ENCFF170VEA https://www.encodeproject.org/files/ENCFF170VEA/@@download/ENCFF170VEA.bam 24.0 M 0 23.2 M 0.964 SE 76 76 native 0.0 M 19.3 M 18.9 M 0.787 0.98 0.98 59.77 190 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/41fb6371-9a33-46d9-bbf1-ffebe3a009be/@@download/cross_correlation_plot/ENCFF690DBL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB466YQP bradley-bernstein:DNA_Lib 6119 ENCFF690DBL HiSeq 2500 2017-01-07T00:29:10.626235+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1j1bjQ03692gP0X7v8p5KBp ENCSR619OQS https://www.encodeproject.org/experiments/ENCSR619OQS "histone,histone modification,broad histone mark" H3K9me3-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF264AQI https://www.encodeproject.org/files/ENCFF264AQI/@@download/ENCFF264AQI.bam ENCFF529CJD https://www.encodeproject.org/files/ENCFF529CJD/@@download/ENCFF529CJD.bam 5.2 M 0 5.1 M 0.989 SE 76 76 native 0.0 M 4.3 M 4.0 M 0.778 0.96 0.96 22.42 175 1.01 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/3fbefeef-0d44-4525-9add-254f25d6d692/@@download/cross_correlation_plot/ENCFF530JUB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB115NTH bradley-bernstein:DNA_Lib 6186 ENCFF530JUB HiSeq 2500 2017-01-07T00:24:07.556916+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1j1bxQ03695zYbz0bgXPJ88 ENCSR790QWJ https://www.encodeproject.org/experiments/ENCSR790QWJ "histone,histone modification,broad histone mark" H4K20me1-human KMS-11 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF223QUE https://www.encodeproject.org/files/ENCFF223QUE/@@download/ENCFF223QUE.bam ENCFF649LYZ https://www.encodeproject.org/files/ENCFF649LYZ/@@download/ENCFF649LYZ.bam 33.5 M 0 30.1 M 0.899 SE 76 76 native 0.0 M 25.6 M 24.2 M 0.724 0.96 0.96 24.17 200 1.01 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/6af4a99d-276d-4bac-9d05-684aaf78a445/@@download/cross_correlation_plot/ENCFF027EKY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB348COJ bradley-bernstein:DNA_Lib 6115 ENCFF027EKY HiSeq 2500 2016-10-29T04:50:58.777702+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xBBQ0369668063VP6bf73 ENCSR790QWJ https://www.encodeproject.org/experiments/ENCSR790QWJ "histone,histone modification,broad histone mark" H4K20me1-human KMS-11 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF631ZQE https://www.encodeproject.org/files/ENCFF631ZQE/@@download/ENCFF631ZQE.bam ENCFF126LLW https://www.encodeproject.org/files/ENCFF126LLW/@@download/ENCFF126LLW.bam 19.3 M 0 18.4 M 0.955 SE 76 76 native 0.0 M 16.2 M 14.1 M 0.732 0.87 0.87 7.36 205 1.03 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c0f8d18-ddb4-4d7f-be38-70d0b3255ad1/@@download/cross_correlation_plot/ENCFF285BDH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB039UBM bradley-bernstein:DNA_Lib 6967 ENCFF285BDH HiSeq 2500 2016-10-29T04:24:57.447571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09vKV003694qqQFPkF02ZGk ENCSR255BOF https://www.encodeproject.org/experiments/ENCSR255BOF control Control-human KOPT-K1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF857FPM https://www.encodeproject.org/files/ENCFF857FPM/@@download/ENCFF857FPM.bam ENCFF837FYA https://www.encodeproject.org/files/ENCFF837FYA/@@download/ENCFF837FYA.bam 95.3 M 0 83.1 M 0.872 SE "76,36" 36 36 0.0 M 63.2 M 41.5 M 0.436 0.67 0.65 2.73 185 1.02 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/68e1a6d8-28ad-4b5c-a52e-a3574abba892/@@download/cross_correlation_plot/ENCFF054IRC-ENCFF364BTA-ENCFF368OCV_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB081WWJ bradley-bernstein:DNA_Lib 1006 "ENCFF054IRC,ENCFF364BTA,ENCFF368OCV" "HiSeq 2000,HiSeq 2500" 2016-11-08T03:58:19.388843+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QG55Q0369PbJv8fGB41y4K ENCSR255BOF https://www.encodeproject.org/experiments/ENCSR255BOF control Control-human KOPT-K1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF138HOL https://www.encodeproject.org/files/ENCFF138HOL/@@download/ENCFF138HOL.bam ENCFF554AXK https://www.encodeproject.org/files/ENCFF554AXK/@@download/ENCFF554AXK.bam 118.6 M 0 91.0 M 0.767 SE 36 36 None 0.0 M 65.5 M 63.9 M 0.539 0.98 0.98 50.96 60 1.01 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff7c00ab-ebe5-4649-9c12-3b4af78345ee/@@download/cross_correlation_plot/ENCFF095YNS-ENCFF454MGO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB608CDM,ENCLB649EYM" "bradley-bernstein:DNA_Lib 82,bradley-bernstein:DNA_Lib 79" "ENCFF095YNS,ENCFF454MGO" HiSeq 2000 2016-05-25T14:17:37.040106+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx28g7003698pb1374Vfk6J8 ENCSR719FEJ https://www.encodeproject.org/experiments/ENCSR719FEJ "histone,histone modification,narrow histone mark" H3K27ac-human KOPT-K1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF679CAM https://www.encodeproject.org/files/ENCFF679CAM/@@download/ENCFF679CAM.bam ENCFF460TRF https://www.encodeproject.org/files/ENCFF460TRF/@@download/ENCFF460TRF.bam 47.3 M 0 41.1 M 0.869 SE 36 36 native 0.0 M 33.8 M 13.1 M 0.277 0.47 0.50 2.23 245 1.44 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/2574a9c2-bdd6-4599-aed3-c65af33b09cd/@@download/cross_correlation_plot/ENCFF046DDT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB958OJS bradley-bernstein:DNA_Lib 970 ENCFF046DDT HiSeq 2000 2016-11-08T04:05:01.439257+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QGbPQ03696jy9Kv0B4YPpQ ENCSR719FEJ https://www.encodeproject.org/experiments/ENCSR719FEJ "histone,histone modification,narrow histone mark" H3K27ac-human KOPT-K1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF800NUM https://www.encodeproject.org/files/ENCFF800NUM/@@download/ENCFF800NUM.bam ENCFF875QKI https://www.encodeproject.org/files/ENCFF875QKI/@@download/ENCFF875QKI.bam 26.0 M 0 19.2 M 0.736 SE 36 36 native 0.0 M 16.1 M 14.5 M 0.557 0.91 0.92 13.21 215 1.60 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/935768dd-3556-49e7-b2d4-db1ab45f1b09/@@download/cross_correlation_plot/ENCFF243FEQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB816SDC bradley-bernstein:DNA_Lib 76 ENCFF243FEQ HiSeq 2000 2016-11-08T04:05:00.406754+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QGbY00369B9XVbg4B76YkZ ENCSR879WTY https://www.encodeproject.org/experiments/ENCSR879WTY "histone,histone modification,broad histone mark" H3K36me3-human KOPT-K1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF763EXG https://www.encodeproject.org/files/ENCFF763EXG/@@download/ENCFF763EXG.bam ENCFF639GXW https://www.encodeproject.org/files/ENCFF639GXW/@@download/ENCFF639GXW.bam 25.5 M 0 22.2 M 0.868 SE 36 36 native 0.0 M 17.2 M 9.3 M 0.366 0.56 0.55 2.16 200 1.06 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/570217a6-e222-487d-a46a-65a1d278d566/@@download/cross_correlation_plot/ENCFF238VVB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB541VFU bradley-bernstein:DNA_Lib 972 ENCFF238VVB HiSeq 2000 2016-11-08T04:05:06.812545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QGZ7j03695kGp5Vkb1YvPF ENCSR879WTY https://www.encodeproject.org/experiments/ENCSR879WTY "histone,histone modification,broad histone mark" H3K36me3-human KOPT-K1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF106KNR https://www.encodeproject.org/files/ENCFF106KNR/@@download/ENCFF106KNR.bam ENCFF363WOV https://www.encodeproject.org/files/ENCFF363WOV/@@download/ENCFF363WOV.bam 43.7 M 0 26.9 M 0.614 SE 36 36 native 0.0 M 19.7 M 19.0 M 0.434 0.96 0.96 28.31 190 1.07 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/e80b94dd-9019-4d38-be7e-9f401bd09ee4/@@download/cross_correlation_plot/ENCFF019RTD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB856ENV bradley-bernstein:DNA_Lib 77 ENCFF019RTD HiSeq 2000 2016-11-08T04:05:40.559581+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QGZF8036954FbBZ1bGfBf6 ENCSR535NGG https://www.encodeproject.org/experiments/ENCSR535NGG "histone,histone modification,narrow histone mark" H3K4me3-human KOPT-K1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF007ZAV https://www.encodeproject.org/files/ENCFF007ZAV/@@download/ENCFF007ZAV.bam ENCFF849YBL https://www.encodeproject.org/files/ENCFF849YBL/@@download/ENCFF849YBL.bam 143.0 M 0 118.2 M 0.827 SE 36 36 native 0.0 M 104.1 M 5.1 M 0.035 0.07 0.32 3.41 305 2.34 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/74608077-f557-40c0-8ff5-2e463bd49bcb/@@download/cross_correlation_plot/ENCFF988MDL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB524TME bradley-bernstein:DNA_Lib 969 ENCFF988MDL HiSeq 2000 2016-11-08T04:02:00.461491+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QG6q80369K8J0zg025f318 ENCSR535NGG https://www.encodeproject.org/experiments/ENCSR535NGG "histone,histone modification,narrow histone mark" H3K4me3-human KOPT-K1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF296LOZ https://www.encodeproject.org/files/ENCFF296LOZ/@@download/ENCFF296LOZ.bam ENCFF645DNC https://www.encodeproject.org/files/ENCFF645DNC/@@download/ENCFF645DNC.bam 36.3 M 0 22.1 M 0.609 SE 36 36 native 0.0 M 19.0 M 15.0 M 0.413 0.82 0.83 6.36 175 2.52 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/55365118-a9ad-4228-a08a-67e405d8d5c4/@@download/cross_correlation_plot/ENCFF466WSK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB441JAD bradley-bernstein:DNA_Lib 92 ENCFF466WSK HiSeq 2000 2016-11-08T04:00:52.155134+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QG6z8036941y6xk1837YPQ ENCSR438PYA https://www.encodeproject.org/experiments/ENCSR438PYA "histone,histone modification,broad histone mark" H3K9me3-human KOPT-K1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF279PAL https://www.encodeproject.org/files/ENCFF279PAL/@@download/ENCFF279PAL.bam ENCFF147CDX https://www.encodeproject.org/files/ENCFF147CDX/@@download/ENCFF147CDX.bam 76.0 M 0 71.0 M 0.934 SE 36 36 native 0.0 M 41.6 M 5.1 M 0.067 0.13 0.18 2.10 200 1.09 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/476bfeff-9282-40ec-b336-0e910c6c5f1b/@@download/cross_correlation_plot/ENCFF220HFT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB562PRF bradley-bernstein:DNA_Lib 973 ENCFF220HFT HiSeq 2000 2016-11-08T04:03:21.066504+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QGY880369KV05GPQGPVF7P ENCSR438PYA https://www.encodeproject.org/experiments/ENCSR438PYA "histone,histone modification,broad histone mark" H3K9me3-human KOPT-K1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF736GJA https://www.encodeproject.org/files/ENCFF736GJA/@@download/ENCFF736GJA.bam ENCFF605NPF https://www.encodeproject.org/files/ENCFF605NPF/@@download/ENCFF605NPF.bam 39.6 M 0 28.2 M 0.710 SE 36 36 native 0.0 M 13.3 M 12.8 M 0.323 0.97 0.97 32.87 170 1.07 0.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/86702f26-993f-476c-85d1-a8d67b377cd3/@@download/cross_correlation_plot/ENCFF267UJB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB742DAE bradley-bernstein:DNA_Lib 91 ENCFF267UJB HiSeq 2000 2016-11-08T04:03:23.203500+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QGYFj03691x36xYG9qvJxp ENCSR648HLP https://www.encodeproject.org/experiments/ENCSR648HLP control Control-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF871BGG https://www.encodeproject.org/files/ENCFF871BGG/@@download/ENCFF871BGG.bam ENCFF242LBR https://www.encodeproject.org/files/ENCFF242LBR/@@download/ENCFF242LBR.bam 54.2 M 0 53.0 M 0.977 SE 36 36 36 0.0 M 40.4 M 39.4 M 0.726 0.98 0.98 44.92 210 1.01 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/60e8e0f0-d31c-464f-ad2e-395f79394a0b/@@download/cross_correlation_plot/ENCFF753ZNI-ENCFF706DCA-ENCFF418LZN-ENCFF775ENL_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB703DVX bradley-bernstein:DNA_Lib 425 "ENCFF418LZN,ENCFF753ZNI,ENCFF775ENL,ENCFF706DCA" HiSeq 2000 2016-10-26T04:54:49.292244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07xk5j03698F1qV3kBFq2VV ENCSR648HLP https://www.encodeproject.org/experiments/ENCSR648HLP control Control-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF711NHN https://www.encodeproject.org/files/ENCFF711NHN/@@download/ENCFF711NHN.bam ENCFF928LUL https://www.encodeproject.org/files/ENCFF928LUL/@@download/ENCFF928LUL.bam 91.4 M 0 85.1 M 0.931 SE "76,36" 36 36 0.0 M 65.9 M 50.0 M 0.547 0.77 0.76 4.07 170 1.02 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/5501d243-297a-4d06-a31c-21169efa493f/@@download/cross_correlation_plot/ENCFF630WNF-ENCFF965KVJ-ENCFF802ZSZ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB522STG bradley-bernstein:DNA_Lib 2611 "ENCFF802ZSZ,ENCFF630WNF,ENCFF965KVJ" "HiSeq 2000,HiSeq 2500" 2016-10-26T04:58:52.184559+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07xxB803695140QP5B2vbk7 ENCSR464DKE https://www.encodeproject.org/experiments/ENCSR464DKE "transcription factor,RNA binding protein" CTCF-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF238GNM https://www.encodeproject.org/files/ENCFF238GNM/@@download/ENCFF238GNM.bam ENCFF701QUM https://www.encodeproject.org/files/ENCFF701QUM/@@download/ENCFF701QUM.bam 35.3 M 0 34.5 M 0.977 SE 37 36 36 0.0 M 27.9 M 26.1 M 0.738 0.93 0.94 16.96 190 1.46 2.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/bce5ad8b-737f-4c41-a5d4-904bbf34b284/@@download/cross_correlation_plot/ENCFF002AXG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB938OTD bradley-bernstein:DNA_Lib 4484 ENCFF002AXG HiSeq 2500 2017-02-10T18:46:42.377805+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2Kyk4j036959fPY3K04yZyK ENCSR464DKE https://www.encodeproject.org/experiments/ENCSR464DKE "transcription factor,RNA binding protein" CTCF-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF190HQN https://www.encodeproject.org/files/ENCFF190HQN/@@download/ENCFF190HQN.bam ENCFF988MPI https://www.encodeproject.org/files/ENCFF988MPI/@@download/ENCFF988MPI.bam 42.0 M 0 40.6 M 0.966 SE 36 36 36 0.0 M 32.6 M 26.5 M 0.631 0.83 0.83 6.11 160 1.76 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/e13b4079-1c0c-4f5c-8686-e3a46882d37a/@@download/cross_correlation_plot/ENCFF002ATZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB415QBM bradley-bernstein:DNA_Lib 418 ENCFF002ATZ HiSeq 2000 2017-02-10T18:46:51.352574+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2KykBQ03699BJ8f3PbkQ95g ENCSR900HAP https://www.encodeproject.org/experiments/ENCSR900HAP "histone,histone modification,narrow histone mark" H2AFZ-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF188GTM https://www.encodeproject.org/files/ENCFF188GTM/@@download/ENCFF188GTM.bam ENCFF714SQW https://www.encodeproject.org/files/ENCFF714SQW/@@download/ENCFF714SQW.bam 26.3 M 0 25.7 M 0.977 SE 36 36 native 0.0 M 20.9 M 20.1 M 0.764 0.96 0.96 25.40 190 1.08 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/d79c3ece-482a-4ebc-972c-290a8ba32498/@@download/cross_correlation_plot/ENCFF002AWQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB324MVF bradley-bernstein:DNA_Lib 421 ENCFF002AWQ HiSeq 2000 2016-10-25T21:06:14.822461+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JZP003692zXjp9j3FqpBk ENCSR900HAP https://www.encodeproject.org/experiments/ENCSR900HAP "histone,histone modification,narrow histone mark" H2AFZ-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF536IIU https://www.encodeproject.org/files/ENCFF536IIU/@@download/ENCFF536IIU.bam ENCFF077MRN https://www.encodeproject.org/files/ENCFF077MRN/@@download/ENCFF077MRN.bam 39.5 M 0 37.1 M 0.939 SE 36 36 native 0.0 M 30.5 M 23.0 M 0.581 0.77 0.76 4.04 195 1.07 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/41a43bb4-e761-44e3-94d6-ab730e10aa55/@@download/cross_correlation_plot/ENCFF002AXX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB251QDF bradley-bernstein:DNA_Lib 2607 ENCFF002AXX HiSeq 2000 2016-10-25T21:04:58.279979+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JZXj03692ZB9QBj36jq1K ENCSR267UCE https://www.encodeproject.org/experiments/ENCSR267UCE "histone,histone modification,broad histone mark" H3F3A-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF698KDH https://www.encodeproject.org/files/ENCFF698KDH/@@download/ENCFF698KDH.bam ENCFF651DXJ https://www.encodeproject.org/files/ENCFF651DXJ/@@download/ENCFF651DXJ.bam 50.3 M 0 49.1 M 0.977 SE 76 36 36 0.0 M 38.0 M 35.3 M 0.703 0.93 0.93 13.83 165 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/001d4cbe-b44d-4454-88fb-7d458152225e/@@download/cross_correlation_plot/ENCFF283SYC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB724MNL bradley-bernstein:DNA_Lib 5790 ENCFF283SYC HiSeq 2000 2016-10-26T04:44:53.640409+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y5pQ03699VK2qfkF2Yg8G ENCSR267UCE https://www.encodeproject.org/experiments/ENCSR267UCE "histone,histone modification,broad histone mark" H3F3A-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF949UCD https://www.encodeproject.org/files/ENCFF949UCD/@@download/ENCFF949UCD.bam ENCFF346DYY https://www.encodeproject.org/files/ENCFF346DYY/@@download/ENCFF346DYY.bam 61.2 M 0 59.8 M 0.978 SE 76 36 36 0.0 M 46.4 M 41.0 M 0.671 0.88 0.88 8.29 160 1.02 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/42b26864-3250-4921-998f-1d1bbd078c73/@@download/cross_correlation_plot/ENCFF680PUD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB247EMC bradley-bernstein:DNA_Lib 5792 ENCFF680PUD HiSeq 2500 2016-10-26T04:46:05.242361+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y5y00369J70k2QVF5B07z ENCSR183CQK https://www.encodeproject.org/experiments/ENCSR183CQK "histone,histone modification,broad histone mark" H3K27me3-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF506FWW https://www.encodeproject.org/files/ENCFF506FWW/@@download/ENCFF506FWW.bam ENCFF885XMQ https://www.encodeproject.org/files/ENCFF885XMQ/@@download/ENCFF885XMQ.bam 39.1 M 0 37.1 M 0.950 SE "37,36" 36 36 0.0 M 27.6 M 25.1 M 0.642 0.94 0.94 17.70 205 1.01 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/85302eeb-efd0-46a3-9624-7cfac4991c60/@@download/cross_correlation_plot/ENCFF094MAV-ENCFF590CFV_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB651GRG bradley-bernstein:DNA_Lib 4481 "ENCFF590CFV,ENCFF094MAV" HiSeq 2500 2016-10-26T04:37:45.971808+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y1QQ03691jJ0BZ9F19QkF ENCSR183CQK https://www.encodeproject.org/experiments/ENCSR183CQK "histone,histone modification,broad histone mark" H3K27me3-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF032VCI https://www.encodeproject.org/files/ENCFF032VCI/@@download/ENCFF032VCI.bam ENCFF504PBD https://www.encodeproject.org/files/ENCFF504PBD/@@download/ENCFF504PBD.bam 50.4 M 0 48.0 M 0.952 SE 36 36 native 0.0 M 36.6 M 15.9 M 0.315 0.46 0.45 1.91 225 1.04 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a1080f1-d4d1-4c60-b3fb-c54ed7f468bd/@@download/cross_correlation_plot/ENCFF002AVU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB112WPX bradley-bernstein:DNA_Lib 2224 ENCFF002AVU HiSeq 2000 2016-08-09T15:14:14.798509+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQ7kj036903K73JVk1qQ8y ENCSR837SUQ https://www.encodeproject.org/experiments/ENCSR837SUQ "histone,histone modification,broad histone mark" H3K36me3-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF632EPT https://www.encodeproject.org/files/ENCFF632EPT/@@download/ENCFF632EPT.bam ENCFF786HQT https://www.encodeproject.org/files/ENCFF786HQT/@@download/ENCFF786HQT.bam 35.5 M 0 33.2 M 0.937 SE 36 36 native 0.0 M 25.6 M 24.0 M 0.677 0.94 0.94 17.66 195 1.04 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/3871a725-f3f2-4479-b26f-e2407ee4af2f/@@download/cross_correlation_plot/ENCFF007MEI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB628LUQ bradley-bernstein:DNA_Lib 417 ENCFF007MEI HiSeq 2000 2016-10-25T21:40:07.933019+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JX6Q0369F2Ky8GGFkZxBV ENCSR837SUQ https://www.encodeproject.org/experiments/ENCSR837SUQ "histone,histone modification,broad histone mark" H3K36me3-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF109MTP https://www.encodeproject.org/files/ENCFF109MTP/@@download/ENCFF109MTP.bam ENCFF775ZIJ https://www.encodeproject.org/files/ENCFF775ZIJ/@@download/ENCFF775ZIJ.bam 20.7 M 0 20.3 M 0.980 SE "37,36" 36 36 0.0 M 15.3 M 14.9 M 0.718 0.97 0.97 35.49 165 1.01 0.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e3ac6fd-be77-4659-8c3f-8c87c25559f3/@@download/cross_correlation_plot/ENCFF563FFY-ENCFF770YAZ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB650FNM bradley-bernstein:DNA_Lib 4483 "ENCFF563FFY,ENCFF770YAZ" HiSeq 2500 2016-10-26T04:40:18.522153+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y3Y00369BX1xqb1B807XK ENCSR036KFJ https://www.encodeproject.org/experiments/ENCSR036KFJ "histone,histone modification,broad histone mark" H3K4me1-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF102VEY https://www.encodeproject.org/files/ENCFF102VEY/@@download/ENCFF102VEY.bam ENCFF847TGN https://www.encodeproject.org/files/ENCFF847TGN/@@download/ENCFF847TGN.bam 61.1 M 0 52.5 M 0.859 SE 36 36 native 0.0 M 43.1 M 17.9 M 0.292 0.43 0.43 1.88 185 1.10 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/e984ad37-4deb-4f66-b8d8-bbc7b09fd742/@@download/cross_correlation_plot/ENCFF830CRU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB696SVC bradley-bernstein:DNA_Lib 2597 ENCFF830CRU HiSeq 2000 2016-08-09T15:14:21.653140+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07KX1Q0369B2gPYJZb28Y7x ENCSR036KFJ https://www.encodeproject.org/experiments/ENCSR036KFJ "histone,histone modification,broad histone mark" H3K4me1-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF385SFY https://www.encodeproject.org/files/ENCFF385SFY/@@download/ENCFF385SFY.bam ENCFF508GVW https://www.encodeproject.org/files/ENCFF508GVW/@@download/ENCFF508GVW.bam 33.9 M 0 32.7 M 0.965 SE 36 36 native 0.0 M 26.8 M 24.1 M 0.711 0.91 0.91 10.53 195 1.08 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/eca0bf31-e87f-4f64-95fa-ccea58116e45/@@download/cross_correlation_plot/ENCFF002ATU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB135KTM bradley-bernstein:DNA_Lib 412 ENCFF002ATU HiSeq 2000 2016-08-09T15:13:43.074131+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07KX5803693Z9bgFG8fJj74 ENCSR165LOF https://www.encodeproject.org/experiments/ENCSR165LOF "histone,histone modification,narrow histone mark" H3K4me2-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF294LKS https://www.encodeproject.org/files/ENCFF294LKS/@@download/ENCFF294LKS.bam ENCFF102GTT https://www.encodeproject.org/files/ENCFF102GTT/@@download/ENCFF102GTT.bam 52.2 M 0 47.3 M 0.907 SE 36 36 native 0.0 M 39.5 M 18.8 M 0.359 0.50 0.50 2.08 195 1.22 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/afda8ea6-7287-4980-8bb2-b55e5184fdfa/@@download/cross_correlation_plot/ENCFF002AYL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB499JYK bradley-bernstein:DNA_Lib 2598 ENCFF002AYL HiSeq 2000 2016-10-25T21:07:34.547405+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JYVQ036937FjjzZv2xPBB ENCSR165LOF https://www.encodeproject.org/experiments/ENCSR165LOF "histone,histone modification,narrow histone mark" H3K4me2-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF679IFQ https://www.encodeproject.org/files/ENCFF679IFQ/@@download/ENCFF679IFQ.bam ENCFF122QGC https://www.encodeproject.org/files/ENCFF122QGC/@@download/ENCFF122QGC.bam 29.9 M 0 29.1 M 0.971 SE 36 36 native 0.0 M 24.1 M 20.9 M 0.697 0.88 0.88 8.10 335 1.23 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d8dcda4-9666-4c05-84fc-849379674cf2/@@download/cross_correlation_plot/ENCFF002ATT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB215OIX bradley-bernstein:DNA_Lib 413 ENCFF002ATT HiSeq 2000 2016-10-25T21:05:32.577199+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JYb00369Pqvj8VxzZYz6J ENCSR657RRI https://www.encodeproject.org/experiments/ENCSR657RRI "histone,histone modification,narrow histone mark" H3K4me3-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF519BDM https://www.encodeproject.org/files/ENCFF519BDM/@@download/ENCFF519BDM.bam ENCFF509TFS https://www.encodeproject.org/files/ENCFF509TFS/@@download/ENCFF509TFS.bam 64.8 M 0 60.4 M 0.931 SE 36 36 native 0.0 M 50.0 M 22.2 M 0.342 0.47 0.50 2.27 200 1.33 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/5becfe11-adfb-40ba-b26c-26e77a116cf7/@@download/cross_correlation_plot/ENCFF002BBW-ENCFF002BBM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB836SPU,ENCLB207WLH" "bradley-bernstein:DNA_Lib 2610,bradley-bernstein:DNA_Lib 2599" "ENCFF002BBW,ENCFF002BBM" HiSeq 2000 2016-08-09T15:14:46.265821+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQ79Q03699gPk1kZbgB3z0 ENCSR657RRI https://www.encodeproject.org/experiments/ENCSR657RRI "histone,histone modification,narrow histone mark" H3K4me3-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF352XPY https://www.encodeproject.org/files/ENCFF352XPY/@@download/ENCFF352XPY.bam ENCFF924WRC https://www.encodeproject.org/files/ENCFF924WRC/@@download/ENCFF924WRC.bam 46.6 M 0 44.7 M 0.959 SE "76,36" 36 36 0.0 M 37.1 M 30.1 M 0.646 0.82 0.83 6.06 225 1.42 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/0067e2d9-b7cd-4d2d-976b-4da0f7079d80/@@download/cross_correlation_plot/ENCFF531DSU-ENCFF795PHJ-ENCFF002ATP_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB778YGU bradley-bernstein:DNA_Lib 414 "ENCFF795PHJ,ENCFF002ATP,ENCFF531DSU" "HiSeq 2000,HiSeq 2500" 2016-10-26T04:37:27.133498+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07xyx803694VvqYvxK22qbX ENCSR429QYS https://www.encodeproject.org/experiments/ENCSR429QYS "histone,histone modification,broad histone mark" H3K79me2-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF593CCY https://www.encodeproject.org/files/ENCFF593CCY/@@download/ENCFF593CCY.bam ENCFF660EBX https://www.encodeproject.org/files/ENCFF660EBX/@@download/ENCFF660EBX.bam 19.0 M 0 18.7 M 0.983 SE 37 36 36 0.0 M 14.7 M 14.3 M 0.752 0.97 0.97 36.39 185 1.04 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7ce65a8-3130-4a55-8946-1387a9a4a893/@@download/cross_correlation_plot/ENCFF002AWM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB388NCE bradley-bernstein:DNA_Lib 4485 ENCFF002AWM HiSeq 2500 2016-10-25T21:58:52.335834+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07J2Z803696Y9jfbG3VZfxz ENCSR429QYS https://www.encodeproject.org/experiments/ENCSR429QYS "histone,histone modification,broad histone mark" H3K79me2-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF656XZD https://www.encodeproject.org/files/ENCFF656XZD/@@download/ENCFF656XZD.bam ENCFF578STD https://www.encodeproject.org/files/ENCFF578STD/@@download/ENCFF578STD.bam 36.4 M 0 34.7 M 0.952 SE 36 36 36 0.0 M 27.3 M 25.0 M 0.685 0.92 0.92 12.27 165 1.08 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a8a4e50-b5f3-4608-a5b1-1a283912dfe1/@@download/cross_correlation_plot/ENCFF002AYJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB327RRB bradley-bernstein:DNA_Lib 422 ENCFF002AYJ HiSeq 2000 2016-10-25T21:59:19.961424+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07J2j003696Y9jfbG3VZfyP ENCSR543IKB https://www.encodeproject.org/experiments/ENCSR543IKB "histone,histone modification,narrow histone mark" H3K9ac-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF328ZTP https://www.encodeproject.org/files/ENCFF328ZTP/@@download/ENCFF328ZTP.bam ENCFF344XOB https://www.encodeproject.org/files/ENCFF344XOB/@@download/ENCFF344XOB.bam 77.4 M 0 70.5 M 0.911 SE 36 36 native 0.0 M 58.7 M 22.5 M 0.291 0.41 0.41 1.81 270 1.25 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf642a96-41da-4721-9cda-fa818a0636e2/@@download/cross_correlation_plot/ENCFF002AXZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB977ZQC bradley-bernstein:DNA_Lib 2604 ENCFF002AXZ HiSeq 2000 2016-10-25T21:21:55.939648+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JXY80369B2gPYJZb28Y4F ENCSR543IKB https://www.encodeproject.org/experiments/ENCSR543IKB "histone,histone modification,narrow histone mark" H3K9ac-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF759ZTO https://www.encodeproject.org/files/ENCFF759ZTO/@@download/ENCFF759ZTO.bam ENCFF804ECQ https://www.encodeproject.org/files/ENCFF804ECQ/@@download/ENCFF804ECQ.bam 22.5 M 0 21.9 M 0.974 SE 36 36 native 0.0 M 18.0 M 13.6 M 0.607 0.77 0.77 4.16 315 1.18 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/0af60b04-3ca7-46a3-9869-0e392c0e1994/@@download/cross_correlation_plot/ENCFF002ATY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB361PHC bradley-bernstein:DNA_Lib 419 ENCFF002ATY HiSeq 2000 2016-10-25T21:17:58.115186+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JXgj03697VXYXF1zjJkp0 ENCSR186EAD https://www.encodeproject.org/experiments/ENCSR186EAD "histone,histone modification,broad histone mark" H3K9me2-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF543MOX https://www.encodeproject.org/files/ENCFF543MOX/@@download/ENCFF543MOX.bam ENCFF053MKP https://www.encodeproject.org/files/ENCFF053MKP/@@download/ENCFF053MKP.bam 67.7 M 0 65.9 M 0.974 SE "76,37" 36 36 0.0 M 51.0 M 47.3 M 0.698 0.93 0.93 13.29 200 1.01 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b5aca0a-a184-48d0-b9d9-692f251b66cc/@@download/cross_correlation_plot/ENCFF058YDP-ENCFF540TCX-ENCFF356CSW_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB998KLX bradley-bernstein:DNA_Lib 4487 "ENCFF058YDP,ENCFF356CSW,ENCFF540TCX" HiSeq 2500 2016-10-26T04:45:00.629114+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y52j0369PK6yVbxF59ZjF ENCSR186EAD https://www.encodeproject.org/experiments/ENCSR186EAD "histone,histone modification,broad histone mark" H3K9me2-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF959SLS https://www.encodeproject.org/files/ENCFF959SLS/@@download/ENCFF959SLS.bam ENCFF705RCY https://www.encodeproject.org/files/ENCFF705RCY/@@download/ENCFF705RCY.bam 54.8 M 0 53.7 M 0.980 SE 76 36 36 0.0 M 40.7 M 39.1 M 0.714 0.96 0.96 26.65 205 1.01 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d9ca439-c935-4822-92c9-fd14c8337e84/@@download/cross_correlation_plot/ENCFF916CBF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB642DOZ bradley-bernstein:DNA_Lib 5788 ENCFF916CBF HiSeq 2500 2016-10-26T04:43:35.650667+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y56Q0369FvKVQXxFJj0gq ENCSR884QDT https://www.encodeproject.org/experiments/ENCSR884QDT "histone,histone modification,broad histone mark" H3K9me3-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF074DIR https://www.encodeproject.org/files/ENCFF074DIR/@@download/ENCFF074DIR.bam ENCFF944UXZ https://www.encodeproject.org/files/ENCFF944UXZ/@@download/ENCFF944UXZ.bam 36.7 M 0 34.9 M 0.951 SE "37,36" 36 36 0.0 M 24.2 M 23.6 M 0.643 0.97 0.97 39.00 180 1.01 0.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/57bbcd4e-ad52-4eb3-a706-706fb76e9e89/@@download/cross_correlation_plot/ENCFF031RZU-ENCFF002AXE_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB188HGX bradley-bernstein:DNA_Lib 4486 "ENCFF031RZU,ENCFF002AXE" HiSeq 2500 2016-10-26T04:39:25.426172+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y2pQ03694q32PPxBJ66Vx ENCSR884QDT https://www.encodeproject.org/experiments/ENCSR884QDT "histone,histone modification,broad histone mark" H3K9me3-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF346GIM https://www.encodeproject.org/files/ENCFF346GIM/@@download/ENCFF346GIM.bam ENCFF584ITA https://www.encodeproject.org/files/ENCFF584ITA/@@download/ENCFF584ITA.bam 37.5 M 0 36.0 M 0.962 SE 36 36 native 0.0 M 22.6 M 19.9 M 0.531 0.89 0.89 8.69 185 1.02 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad7b45ea-e08e-4895-90b5-96f3e5a17304/@@download/cross_correlation_plot/ENCFF002AVC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB959HTK bradley-bernstein:DNA_Lib 423 ENCFF002AVC HiSeq 2000 2016-10-25T21:39:06.308533+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JVpQ0369KYp8Kq8FK6yJY ENCSR760ZVL https://www.encodeproject.org/experiments/ENCSR760ZVL "histone,histone modification,broad histone mark" H4K20me1-human Loucy immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF663JNP https://www.encodeproject.org/files/ENCFF663JNP/@@download/ENCFF663JNP.bam ENCFF324DUW https://www.encodeproject.org/files/ENCFF324DUW/@@download/ENCFF324DUW.bam 91.3 M 0 84.2 M 0.922 SE 36 36 native 0.0 M 65.5 M 14.9 M 0.163 0.24 0.21 1.70 210 1.03 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1084faf-0f30-4847-b3f7-2b2de343c3ac/@@download/cross_correlation_plot/ENCFF025CYO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB046LHV bradley-bernstein:DNA_Lib 420 ENCFF025CYO HiSeq 2500 2016-10-25T21:03:48.611169+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K8v803691KQ6pz1vv390K ENCSR760ZVL https://www.encodeproject.org/experiments/ENCSR760ZVL "histone,histone modification,broad histone mark" H4K20me1-human Loucy immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF161TSE https://www.encodeproject.org/files/ENCFF161TSE/@@download/ENCFF161TSE.bam ENCFF301VGF https://www.encodeproject.org/files/ENCFF301VGF/@@download/ENCFF301VGF.bam 53.2 M 0 49.1 M 0.924 SE 36 36 native 0.0 M 37.9 M 18.9 M 0.356 0.52 0.49 1.85 195 1.03 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/be7eabbd-bb62-40a3-b361-192957fca312/@@download/cross_correlation_plot/ENCFF857ZQN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB800HOV bradley-bernstein:DNA_Lib 2605 ENCFF857ZQN HiSeq 2500 2016-10-25T21:03:36.774308+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07K90003693Z9bgFG8fJj6J ENCSR000AMN https://www.encodeproject.org/experiments/ENCSR000AMN control Control-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF813ZYQ https://www.encodeproject.org/files/ENCFF813ZYQ/@@download/ENCFF813ZYQ.bam ENCFF861GBM https://www.encodeproject.org/files/ENCFF861GBM/@@download/ENCFF861GBM.bam 74.3 M 0 65.1 M 0.876 SE 36 36 native 0.0 M 46.7 M 45.4 M 0.611 0.98 0.98 46.08 130 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce71b0d8-14c2-4019-ae8f-759c91e8e540/@@download/cross_correlation_plot/ENCFF788YKS-ENCFF913IHA-ENCFF749GHL-ENCFF556RIX-ENCFF000BHE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB481AJV,ENCLB695AVW" bradley-bernstein:DNA_Lib 135 "ENCFF000BHE,ENCFF556RIX,ENCFF788YKS,ENCFF913IHA,ENCFF749GHL" "HiSeq 2000,Illumina Genome Analyzer II" 2017-04-06T18:46:19.785775+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Y641j03690ppj83bgFPjF9 ENCSR000AMN https://www.encodeproject.org/experiments/ENCSR000AMN control Control-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF801RTD https://www.encodeproject.org/files/ENCFF801RTD/@@download/ENCFF801RTD.bam ENCFF115JNM https://www.encodeproject.org/files/ENCFF115JNM/@@download/ENCFF115JNM.bam 31.1 M 0 24.7 M 0.794 SE 36 36 native 0.0 M 17.2 M 17.0 M 0.548 0.99 0.99 103.84 140 1.01 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/4851b906-9b25-4baf-8f03-6d498be4c61d/@@download/cross_correlation_plot/ENCFF702WJD-ENCFF152UJF-ENCFF000BHF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB695AVX,ENCLB700EDY" bradley-bernstein:DNA_Lib 140 "ENCFF702WJD,ENCFF000BHF,ENCFF152UJF" "HiSeq 2000,Illumina Genome Analyzer IIe" 2017-04-06T17:26:23.913193+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Y646003690xpFq2FYQzpYp ENCSR000ALV https://www.encodeproject.org/experiments/ENCSR000ALV "transcription factor,RNA binding protein" CTCF-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF966DPW https://www.encodeproject.org/files/ENCFF966DPW/@@download/ENCFF966DPW.bam ENCFF830YQV https://www.encodeproject.org/files/ENCFF830YQV/@@download/ENCFF830YQV.bam 20.6 M 0 14.7 M 0.716 SE 36 36 native 0.0 M 10.4 M 8.8 M 0.428 0.86 0.86 6.88 130 1.28 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ad3c608-2942-47c4-9111-0d193ba92765/@@download/cross_correlation_plot/ENCFF000BHL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKQ ENCFF000BHL Illumina Genome Analyzer IIx 2016-12-11T06:16:40.559669+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Zyj03692BKq0F3V3jFk3 ENCSR000ALV https://www.encodeproject.org/experiments/ENCSR000ALV "transcription factor,RNA binding protein" CTCF-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF440NGA https://www.encodeproject.org/files/ENCFF440NGA/@@download/ENCFF440NGA.bam ENCFF596BAM https://www.encodeproject.org/files/ENCFF596BAM/@@download/ENCFF596BAM.bam 9.1 M 0 7.3 M 0.802 SE 36 36 native 0.0 M 5.3 M 4.7 M 0.516 0.92 0.92 12.77 125 3.77 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a4a2d56-fa9c-4b34-a1ef-da1d4a1e7b60/@@download/cross_correlation_plot/ENCFF000BHI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKR ENCFF000BHI Illumina Genome Analyzer IIe 2016-12-11T05:00:09.570556+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166b4j03692yykb1zBpz87X ENCSR000ARE https://www.encodeproject.org/experiments/ENCSR000ARE "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF438BFX https://www.encodeproject.org/files/ENCFF438BFX/@@download/ENCFF438BFX.bam ENCFF885JZK https://www.encodeproject.org/files/ENCFF885JZK/@@download/ENCFF885JZK.bam 32.0 M 0 31.0 M 0.968 SE 36 36 native 0.0 M 23.2 M 21.2 M 0.663 0.92 0.92 12.67 200 1.06 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3f775b8-15de-4073-a623-1ec1f4bbdc2f/@@download/cross_correlation_plot/ENCFF000BHT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARM bradley-bernstein:DNA_Lib 133 ENCFF000BHT HiSeq 2000 2016-12-11T04:32:45.458394+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Y200369KQ3Yk1yz1kgkx ENCSR000ARE https://www.encodeproject.org/experiments/ENCSR000ARE "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF838WWO https://www.encodeproject.org/files/ENCFF838WWO/@@download/ENCFF838WWO.bam ENCFF152BLN https://www.encodeproject.org/files/ENCFF152BLN/@@download/ENCFF152BLN.bam 43.6 M 0 37.2 M 0.854 SE 36 36 native 0.0 M 27.6 M 25.1 M 0.575 0.92 0.92 11.92 155 1.04 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/b95bf902-c8c3-49eb-8011-c90367ef901f/@@download/cross_correlation_plot/ENCFF000BHU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARL bradley-bernstein:DNA_Lib 139 ENCFF000BHU HiSeq 2000 2016-12-11T04:37:18.250710+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Y6j03697yz601ypVJ3gG ENCSR000ARF https://www.encodeproject.org/experiments/ENCSR000ARF "histone,histone modification,narrow histone mark" H2AFZ-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF201FWN https://www.encodeproject.org/files/ENCFF201FWN/@@download/ENCFF201FWN.bam ENCFF562SJB https://www.encodeproject.org/files/ENCFF562SJB/@@download/ENCFF562SJB.bam 22.7 M 0 20.9 M 0.920 SE 36 36 native 0.0 M 16.8 M 16.1 M 0.711 0.96 0.96 24.54 165 1.27 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/245054bf-b7e5-4d7f-b355-1fa187940089/@@download/cross_correlation_plot/ENCFF000BHX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APN bradley-bernstein:DNA_Lib 134 ENCFF000BHX Illumina Genome Analyzer 2016-11-07T03:15:15.261320+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJx5Q03697bbG5kk8621jK ENCSR000ARF https://www.encodeproject.org/experiments/ENCSR000ARF "histone,histone modification,narrow histone mark" H2AFZ-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF975YSF https://www.encodeproject.org/files/ENCFF975YSF/@@download/ENCFF975YSF.bam ENCFF207RST https://www.encodeproject.org/files/ENCFF207RST/@@download/ENCFF207RST.bam 20.4 M 0 18.1 M 0.885 SE 36 36 native 0.0 M 14.7 M 14.0 M 0.688 0.96 0.96 24.55 190 1.36 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/d8b47191-72a1-41be-b496-c53a361a1965/@@download/cross_correlation_plot/ENCFF000BHW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVE bradley-bernstein:DNA_Lib 136 ENCFF000BHW HiSeq 2000 2016-11-07T03:14:53.199348+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJxB003699P6PYx8BPxY5g ENCSR000ALW https://www.encodeproject.org/experiments/ENCSR000ALW "histone,histone modification,narrow histone mark" H3K27ac-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF068FTW https://www.encodeproject.org/files/ENCFF068FTW/@@download/ENCFF068FTW.bam ENCFF313EAL https://www.encodeproject.org/files/ENCFF313EAL/@@download/ENCFF313EAL.bam 19.4 M 0 13.2 M 0.682 SE 36 36 native 0.0 M 10.4 M 9.8 M 0.509 0.95 0.95 22.00 175 1.68 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/13197c11-8b57-4586-be19-e4e378123c19/@@download/cross_correlation_plot/ENCFF000BIL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMP ENCFF000BIL Illumina Genome Analyzer IIe 2016-08-09T15:58:45.767559+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY9700369J0Bzfkv2Xyx9y ENCSR000ALW https://www.encodeproject.org/experiments/ENCSR000ALW "histone,histone modification,narrow histone mark" H3K27ac-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF988TNK https://www.encodeproject.org/files/ENCFF988TNK/@@download/ENCFF988TNK.bam ENCFF356JJE https://www.encodeproject.org/files/ENCFF356JJE/@@download/ENCFF356JJE.bam 13.9 M 0 12.0 M 0.862 SE 36 36 native 0.0 M 9.5 M 7.4 M 0.535 0.81 0.80 4.88 190 1.31 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/652039c9-d478-4ad0-8c96-2301c666d6cf/@@download/cross_correlation_plot/ENCFF000BIM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APO ENCFF000BIM Illumina Genome Analyzer IIx 2016-08-09T15:58:33.912415+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY99Q0369F97Byg82v2pjx ENCSR000ALX https://www.encodeproject.org/experiments/ENCSR000ALX "histone,histone modification,broad histone mark" H3K27me3-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF843LLA https://www.encodeproject.org/files/ENCFF843LLA/@@download/ENCFF843LLA.bam ENCFF796FHM https://www.encodeproject.org/files/ENCFF796FHM/@@download/ENCFF796FHM.bam 12.2 M 0 8.8 M 0.721 SE 36 36 native 0.0 M 6.1 M 6.0 M 0.492 0.98 0.98 47.88 120 1.04 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/f703b7cd-2ae4-4dd6-be40-c6f187fd6b9a/@@download/cross_correlation_plot/ENCFF000BIR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEM ENCFF000BIR Illumina Genome Analyzer II 2016-11-07T03:11:22.094289+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK3j0036945FQkxk8GJXbB ENCSR000ALX https://www.encodeproject.org/experiments/ENCSR000ALX "histone,histone modification,broad histone mark" H3K27me3-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF015OVW https://www.encodeproject.org/files/ENCFF015OVW/@@download/ENCFF015OVW.bam ENCFF079XKE https://www.encodeproject.org/files/ENCFF079XKE/@@download/ENCFF079XKE.bam 13.8 M 0 11.9 M 0.860 SE 36 36 native 0.0 M 8.9 M 7.5 M 0.541 0.85 0.85 6.50 165 1.07 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ddfa96b-4a78-4e6b-9cf4-823ee01d92ff/@@download/cross_correlation_plot/ENCFF000BIT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEL ENCFF000BIT Illumina Genome Analyzer IIx 2016-11-07T03:11:32.271408+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK3vQ03697bbG5kk8621vK ENCSR000ALY https://www.encodeproject.org/experiments/ENCSR000ALY "histone,histone modification,broad histone mark" H3K36me3-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF244KWR https://www.encodeproject.org/files/ENCFF244KWR/@@download/ENCFF244KWR.bam ENCFF739WCY https://www.encodeproject.org/files/ENCFF739WCY/@@download/ENCFF739WCY.bam 12.6 M 0 9.9 M 0.785 SE 36 36 native 0.0 M 7.1 M 6.9 M 0.549 0.98 0.98 56.63 125 1.02 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9a8d7ef-da2f-40c4-a230-c6aa6dd73a5d/@@download/cross_correlation_plot/ENCFF000BIS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APY ENCFF000BIS Illumina Genome Analyzer IIe 2016-11-07T03:11:52.838420+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK3J0036945FQkxk8GJXb1 ENCSR000ALY https://www.encodeproject.org/experiments/ENCSR000ALY "histone,histone modification,broad histone mark" H3K36me3-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF083BCW https://www.encodeproject.org/files/ENCFF083BCW/@@download/ENCFF083BCW.bam ENCFF470RTS https://www.encodeproject.org/files/ENCFF470RTS/@@download/ENCFF470RTS.bam 16.4 M 0 12.0 M 0.733 SE 36 36 native 0.0 M 8.7 M 8.5 M 0.516 0.98 0.98 47.39 130 1.04 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/0fc9fd6b-f065-4c01-b8f3-989f78ef3fb3/@@download/cross_correlation_plot/ENCFF000BIY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APZ ENCFF000BIY Illumina Genome Analyzer IIe 2016-11-07T03:11:37.277650+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK3VQ03697bbG5kk8621v5 ENCSR000AMJ https://www.encodeproject.org/experiments/ENCSR000AMJ "histone,histone modification,broad histone mark" H3K4me1-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF239XXU https://www.encodeproject.org/files/ENCFF239XXU/@@download/ENCFF239XXU.bam ENCFF673RFT https://www.encodeproject.org/files/ENCFF673RFT/@@download/ENCFF673RFT.bam 24.4 M 0 17.6 M 0.720 SE 36 36 native 0.0 M 13.1 M 12.3 M 0.503 0.94 0.94 16.75 165 1.24 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/d3d17560-35ee-43bf-bd9d-a26fa0d946e8/@@download/cross_correlation_plot/ENCFF000BJD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AWA ENCFF000BJD Illumina Genome Analyzer II 2016-11-07T03:15:05.971477+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJvP003698f4X9JjJfY80p ENCSR000AMJ https://www.encodeproject.org/experiments/ENCSR000AMJ "histone,histone modification,broad histone mark" H3K4me1-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF062LKX https://www.encodeproject.org/files/ENCFF062LKX/@@download/ENCFF062LKX.bam ENCFF656AUY https://www.encodeproject.org/files/ENCFF656AUY/@@download/ENCFF656AUY.bam 26.4 M 0 20.4 M 0.773 SE 36 36 native 0.0 M 15.5 M 14.5 M 0.550 0.95 0.95 20.49 200 1.13 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f47eb0e-f3af-4d71-aa7d-e656b532d170/@@download/cross_correlation_plot/ENCFF000BJE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVZ ENCFF000BJE Illumina Genome Analyzer IIx 2016-11-07T03:16:04.466940+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJvZ003696Zj590J8YzbYG ENCSR000AMK https://www.encodeproject.org/experiments/ENCSR000AMK "histone,histone modification,narrow histone mark" H3K4me2-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF437UML https://www.encodeproject.org/files/ENCFF437UML/@@download/ENCFF437UML.bam ENCFF231GVY https://www.encodeproject.org/files/ENCFF231GVY/@@download/ENCFF231GVY.bam 15.7 M 0 11.8 M 0.754 SE 36 36 native 0.0 M 8.9 M 8.7 M 0.555 0.98 0.98 50.65 160 1.17 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8e3b32a-6641-4c76-809a-0c0d9f7bd29b/@@download/cross_correlation_plot/ENCFF000BJF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGU ENCFF000BJF Illumina Genome Analyzer II 2016-11-07T03:16:18.499164+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJgx0036954FbBZ1bGf43z ENCSR000AMK https://www.encodeproject.org/experiments/ENCSR000AMK "histone,histone modification,narrow histone mark" H3K4me2-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF429CJQ https://www.encodeproject.org/files/ENCFF429CJQ/@@download/ENCFF429CJQ.bam ENCFF074IHC https://www.encodeproject.org/files/ENCFF074IHC/@@download/ENCFF074IHC.bam 28.6 M 0 18.4 M 0.642 SE 36 36 native 0.0 M 13.7 M 12.6 M 0.441 0.93 0.93 13.62 145 1.53 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c3780f2-f5b3-4104-bb59-4566b4814a1e/@@download/cross_correlation_plot/ENCFF000BJJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGV ENCFF000BJJ Illumina Genome Analyzer IIe 2016-11-07T03:16:39.860853+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJj1Q036911ffQk1b9pX8z ENCSR000AML https://www.encodeproject.org/experiments/ENCSR000AML "histone,histone modification,narrow histone mark" H3K4me3-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF731UOQ https://www.encodeproject.org/files/ENCFF731UOQ/@@download/ENCFF731UOQ.bam ENCFF471IAM https://www.encodeproject.org/files/ENCFF471IAM/@@download/ENCFF471IAM.bam 25.2 M 0 18.1 M 0.718 SE 36 36 native 0.0 M 13.3 M 12.0 M 0.477 0.91 0.91 12.21 140 2.16 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/c95eed55-6773-4204-bdd0-6a9e790012e0/@@download/cross_correlation_plot/ENCFF000BJO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVH ENCFF000BJO Illumina Genome Analyzer II 2016-08-20T00:46:51.488078+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZPX803694ggpx3GG4KZXf ENCSR000AML https://www.encodeproject.org/experiments/ENCSR000AML "histone,histone modification,narrow histone mark" H3K4me3-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF502ZEG https://www.encodeproject.org/files/ENCFF502ZEG/@@download/ENCFF502ZEG.bam ENCFF454CTO https://www.encodeproject.org/files/ENCFF454CTO/@@download/ENCFF454CTO.bam 24.4 M 0 12.4 M 0.509 SE 36 36 native 0.0 M 8.3 M 7.9 M 0.323 0.96 0.96 26.57 165 1.50 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/c481b4c3-447d-40cd-bffd-730c9aab6fd2/@@download/cross_correlation_plot/ENCFF000BJN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVI ENCFF000BJN Illumina Genome Analyzer IIe 2016-08-20T00:44:07.556103+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZPZ803694QXJjqj94ZP0B ENCSR016JWS https://www.encodeproject.org/experiments/ENCSR016JWS "histone,histone modification,narrow histone mark" H3K4me3-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF511SZH https://www.encodeproject.org/files/ENCFF511SZH/@@download/ENCFF511SZH.bam ENCFF887MHB https://www.encodeproject.org/files/ENCFF887MHB/@@download/ENCFF887MHB.bam 41.3 M 0 40.8 M 0.987 SE "76,36" 36 36 0.0 M 32.3 M 29.5 M 0.714 0.95 0.95 19.89 210 1.09 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/f79ac4de-2a38-4d61-bb28-b73ff06e191d/@@download/cross_correlation_plot/ENCFF904QEC-ENCFF113ECY-ENCFF174YML_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB245XTI bradley-bernstein:DNA_Lib 4586 "ENCFF113ECY,ENCFF174YML,ENCFF904QEC" "HiSeq 2000,HiSeq 2500" 2016-11-03T04:51:23.838149+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Gbfv8036949JVzZVbpZFZF ENCSR016JWS https://www.encodeproject.org/experiments/ENCSR016JWS "histone,histone modification,narrow histone mark" H3K4me3-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF944KRW https://www.encodeproject.org/files/ENCFF944KRW/@@download/ENCFF944KRW.bam ENCFF579GXW https://www.encodeproject.org/files/ENCFF579GXW/@@download/ENCFF579GXW.bam 53.0 M 0 51.7 M 0.975 SE 76 36 36 0.0 M 39.8 M 35.9 M 0.678 0.90 0.90 9.99 175 1.06 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad1b27a5-0df7-4a46-99b2-968591fc88ab/@@download/cross_correlation_plot/ENCFF352FFB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB585PYO bradley-bernstein:DNA_Lib 6095 ENCFF352FFB HiSeq 2000 2016-10-29T04:53:11.918206+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbbXj0369Fx2yP98pBg0V6 ENCSR000ASB https://www.encodeproject.org/experiments/ENCSR000ASB "histone,histone modification,broad histone mark" H3K79me2-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF270RRN https://www.encodeproject.org/files/ENCFF270RRN/@@download/ENCFF270RRN.bam ENCFF263HEL https://www.encodeproject.org/files/ENCFF263HEL/@@download/ENCFF263HEL.bam 27.9 M 0 26.1 M 0.934 SE 36 36 native 0.0 M 20.5 M 19.3 M 0.692 0.94 0.95 18.43 155 1.13 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/c48a383c-bb34-44ee-8e37-e9baf7a1e864/@@download/cross_correlation_plot/ENCFF000BJV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANB bradley-bernstein:DNA_Lib 131 ENCFF000BJV HiSeq 2000 2016-11-07T03:18:45.185944+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJZP0036954FbBZ1bGf41y ENCSR000ASB https://www.encodeproject.org/experiments/ENCSR000ASB "histone,histone modification,broad histone mark" H3K79me2-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF767IAW https://www.encodeproject.org/files/ENCFF767IAW/@@download/ENCFF767IAW.bam ENCFF305ZOU https://www.encodeproject.org/files/ENCFF305ZOU/@@download/ENCFF305ZOU.bam 40.5 M 0 32.0 M 0.789 SE 36 36 native 0.0 M 24.4 M 23.3 M 0.576 0.96 0.96 25.09 140 1.15 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/45e4ae56-5372-47bb-8f10-954e012c888e/@@download/cross_correlation_plot/ENCFF000BJT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANA bradley-bernstein:DNA_Lib 137 ENCFF000BJT HiSeq 2000 2016-11-07T03:18:53.262153+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJZb00369F4g82fJbGXYFQ ENCSR000ALZ https://www.encodeproject.org/experiments/ENCSR000ALZ "histone,histone modification,narrow histone mark" H3K9ac-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF410UJR https://www.encodeproject.org/files/ENCFF410UJR/@@download/ENCFF410UJR.bam ENCFF467WCR https://www.encodeproject.org/files/ENCFF467WCR/@@download/ENCFF467WCR.bam 20.8 M 0 7.8 M 0.377 SE 36 36 native 0.0 M 4.4 M 4.1 M 0.195 0.95 0.95 19.91 115 1.32 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/d17cc818-d785-4c17-b505-98b8234d2a13/@@download/cross_correlation_plot/ENCFF000BKB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUK ENCFF000BKB Illumina Genome Analyzer IIx 2016-11-07T03:18:14.960557+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJZ3Q03695kGp5Vkb1Yg1K ENCSR000ALZ https://www.encodeproject.org/experiments/ENCSR000ALZ "histone,histone modification,narrow histone mark" H3K9ac-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF017QWW https://www.encodeproject.org/files/ENCFF017QWW/@@download/ENCFF017QWW.bam ENCFF464LED https://www.encodeproject.org/files/ENCFF464LED/@@download/ENCFF464LED.bam 14.9 M 0 12.5 M 0.840 SE 36 36 native 0.0 M 9.8 M 7.7 M 0.518 0.81 0.80 4.96 180 1.38 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/1fcc497d-acd2-4132-8f03-a11bf0bed5fc/@@download/cross_correlation_plot/ENCFF000BJX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUJ ENCFF000BJX Illumina Genome Analyzer IIx 2016-11-07T03:17:52.336253+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJZ7j03697GFbjV1b4gVbv ENCSR000ARG https://www.encodeproject.org/experiments/ENCSR000ARG "histone,histone modification,broad histone mark" H3K9me3-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF242YPR https://www.encodeproject.org/files/ENCFF242YPR/@@download/ENCFF242YPR.bam ENCFF749MVD https://www.encodeproject.org/files/ENCFF749MVD/@@download/ENCFF749MVD.bam 25.0 M 0 19.4 M 0.777 SE 36 36 native 0.0 M 10.1 M 9.6 M 0.384 0.95 0.95 21.95 165 1.05 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/410c3d48-f8e4-4d0d-ae0e-2e812510b658/@@download/cross_correlation_plot/ENCFF000BIF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASS bradley-bernstein:DNA_Lib 132 ENCFF000BIF HiSeq 2000 2016-11-07T03:15:18.649388+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJq7j03696QVKGb5b1825k ENCSR000ARG https://www.encodeproject.org/experiments/ENCSR000ARG "histone,histone modification,broad histone mark" H3K9me3-human mammary epithelial cell primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF968BRU https://www.encodeproject.org/files/ENCFF968BRU/@@download/ENCFF968BRU.bam ENCFF111NYT https://www.encodeproject.org/files/ENCFF111NYT/@@download/ENCFF111NYT.bam 33.7 M 0 12.7 M 0.377 SE 36 36 native 0.0 M 6.6 M 6.3 M 0.187 0.96 0.97 30.61 150 1.04 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/cfc20d99-6ece-48af-bc25-537a4a48c0a3/@@download/cross_correlation_plot/ENCFF000BIC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AST bradley-bernstein:DNA_Lib 138 ENCFF000BIC HiSeq 2000 2016-11-07T03:15:06.762342+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJqJQ03698kJz2gxb7gpG8 ENCSR000AMM https://www.encodeproject.org/experiments/ENCSR000AMM "histone,histone modification,broad histone mark" H4K20me1-human mammary epithelial cell primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF120SIU https://www.encodeproject.org/files/ENCFF120SIU/@@download/ENCFF120SIU.bam ENCFF629GIZ https://www.encodeproject.org/files/ENCFF629GIZ/@@download/ENCFF629GIZ.bam 40.3 M 0 19.1 M 0.474 SE 36 36 native 0.0 M 12.1 M 11.7 M 0.290 0.97 0.97 32.33 125 1.02 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/73159ff0-6a2d-4cc4-b07f-d780f4633644/@@download/cross_correlation_plot/ENCFF000BKH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGN ENCFF000BKH Illumina Genome Analyzer II 2016-11-13T02:20:26.554886+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Ygf680369696p87G654vZ9 ENCSR000AMM https://www.encodeproject.org/experiments/ENCSR000AMM "histone,histone modification,broad histone mark" H4K20me1-human mammary epithelial cell primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF744MRF https://www.encodeproject.org/files/ENCFF744MRF/@@download/ENCFF744MRF.bam ENCFF542PQS https://www.encodeproject.org/files/ENCFF542PQS/@@download/ENCFF542PQS.bam 20.0 M 0 13.3 M 0.667 SE 36 36 native 0.0 M 9.1 M 9.0 M 0.450 0.98 0.99 68.36 105 1.01 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f6e821b-8192-41f1-b1d6-2caabf8f9934/@@download/cross_correlation_plot/ENCFF000BKC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGM ENCFF000BKC Illumina Genome Analyzer IIe 2016-11-13T00:46:30.308116+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0YgfBj0369PxQkg0xY3PpZv ENCSR768LHG https://www.encodeproject.org/experiments/ENCSR768LHG control Control-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF107RUY https://www.encodeproject.org/files/ENCFF107RUY/@@download/ENCFF107RUY.bam ENCFF017YII https://www.encodeproject.org/files/ENCFF017YII/@@download/ENCFF017YII.bam 128.8 M 0 123.6 M 0.959 SE 36 36 36 0.0 M 95.7 M 72.3 M 0.561 0.77 0.81 6.20 190 1.01 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/476a7afa-1f1d-4f70-ac5c-41c96a9f83ba/@@download/cross_correlation_plot/ENCFF318ZNB-ENCFF640MKX_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB953JFG,ENCLB479DDJ" "bradley-bernstein:DNA_Lib 5101,bradley-bernstein:DNA_Lib 3766" "ENCFF318ZNB,ENCFF640MKX" HiSeq 2000 2016-10-25T05:10:44.235344+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079VkQ03696Q3xXf4g8x5pz ENCSR768LHG https://www.encodeproject.org/experiments/ENCSR768LHG control Control-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF292PQI https://www.encodeproject.org/files/ENCFF292PQI/@@download/ENCFF292PQI.bam ENCFF968AIF https://www.encodeproject.org/files/ENCFF968AIF/@@download/ENCFF968AIF.bam 117.4 M 0 113.7 M 0.969 SE 76 36 36 0.0 M 87.1 M 80.5 M 0.686 0.93 0.93 13.81 165 1.01 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/150b322f-914c-42a0-a270-81b91dcc6e7d/@@download/cross_correlation_plot/ENCFF595BTS-ENCFF222VRH_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB606MHG bradley-bernstein:DNA_Lib 8132 "ENCFF222VRH,ENCFF595BTS" HiSeq 2500 2016-10-25T05:09:20.568700+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079VxQ03696Q3xXf4g8x5q9 ENCSR906IQU https://www.encodeproject.org/experiments/ENCSR906IQU "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF759DNS https://www.encodeproject.org/files/ENCFF759DNS/@@download/ENCFF759DNS.bam ENCFF645FVP https://www.encodeproject.org/files/ENCFF645FVP/@@download/ENCFF645FVP.bam 14.4 M 0 14.3 M 0.992 SE 76 36 36 0.0 M 11.5 M 9.3 M 0.641 0.81 0.80 4.74 180 1.02 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f662d51-2d72-4973-ae55-cda10466c652/@@download/cross_correlation_plot/ENCFF463LYW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB308JHC bradley-bernstein:DNA_Lib 6025 ENCFF463LYW HiSeq 2000 2016-11-26T04:35:43.327503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vKq9Q036962XykK1Z51Bkg ENCSR906IQU https://www.encodeproject.org/experiments/ENCSR906IQU "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF712UGK https://www.encodeproject.org/files/ENCFF712UGK/@@download/ENCFF712UGK.bam ENCFF459CSY https://www.encodeproject.org/files/ENCFF459CSY/@@download/ENCFF459CSY.bam 30.6 M 0 28.8 M 0.943 SE 36 36 native 0.0 M 22.6 M 19.4 M 0.634 0.86 0.85 6.68 150 1.02 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/745f4485-21b9-49fe-ab4a-a02786a16c52/@@download/cross_correlation_plot/ENCFF245QXU-ENCFF764QDJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB883DAD bradley-bernstein:DNA_Lib 4993 "ENCFF764QDJ,ENCFF245QXU" HiSeq 2500 2016-11-26T01:23:19.697212+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB8Y00369KQ15V00X1qBjX ENCSR460YHB https://www.encodeproject.org/experiments/ENCSR460YHB "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF976DVA https://www.encodeproject.org/files/ENCFF976DVA/@@download/ENCFF976DVA.bam ENCFF420MQZ https://www.encodeproject.org/files/ENCFF420MQZ/@@download/ENCFF420MQZ.bam 17.4 M 0 17.2 M 0.992 SE 76 36 36 0.0 M 13.9 M 10.2 M 0.587 0.74 0.72 3.46 185 1.03 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/82336013-77b2-42a3-a203-63a668c23a96/@@download/cross_correlation_plot/ENCFF517NWX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB446QOT bradley-bernstein:DNA_Lib 6024 ENCFF517NWX HiSeq 2000 2016-11-26T04:36:01.166162+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vKvb803699j10QBk368zJQ ENCSR460YHB https://www.encodeproject.org/experiments/ENCSR460YHB "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF571IWS https://www.encodeproject.org/files/ENCFF571IWS/@@download/ENCFF571IWS.bam ENCFF922HUV https://www.encodeproject.org/files/ENCFF922HUV/@@download/ENCFF922HUV.bam 37.7 M 0 31.8 M 0.844 SE 36 36 native 0.0 M 24.7 M 16.0 M 0.426 0.68 0.67 3.02 180 1.05 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/4dc517bc-bdf2-4640-b54e-118490ba13e9/@@download/cross_correlation_plot/ENCFF440FOX-ENCFF161VKN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB629WGA bradley-bernstein:DNA_Lib 5004 "ENCFF440FOX,ENCFF161VKN" HiSeq 2000 2016-11-26T01:23:31.165416+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vB8G00369KQ15V00X1qBj8 ENCSR057MWG https://www.encodeproject.org/experiments/ENCSR057MWG "histone,histone modification,narrow histone mark" H2AFZ-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF441UZP https://www.encodeproject.org/files/ENCFF441UZP/@@download/ENCFF441UZP.bam ENCFF292EKR https://www.encodeproject.org/files/ENCFF292EKR/@@download/ENCFF292EKR.bam 56.3 M 0 51.0 M 0.907 SE 36 36 native 0.0 M 39.6 M 36.4 M 0.648 0.93 0.93 13.85 205 1.10 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/67850644-fddc-4fa1-97fe-21517429d424/@@download/cross_correlation_plot/ENCFF565MIO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB802TFV bradley-bernstein:DNA_Lib 3817 ENCFF565MIO HiSeq 2000 2016-10-19T05:18:48.793841+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039z400369PZZQgy5GJb2k9 ENCSR057MWG https://www.encodeproject.org/experiments/ENCSR057MWG "histone,histone modification,narrow histone mark" H2AFZ-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF708JCH https://www.encodeproject.org/files/ENCFF708JCH/@@download/ENCFF708JCH.bam ENCFF238JGH https://www.encodeproject.org/files/ENCFF238JGH/@@download/ENCFF238JGH.bam 53.8 M 0 52.1 M 0.969 SE 36 36 native 0.0 M 41.6 M 34.4 M 0.639 0.89 0.89 9.51 190 1.06 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd5383cb-3b15-43c3-a18e-c8662f3db1ee/@@download/cross_correlation_plot/ENCFF081DDG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB269UER bradley-bernstein:DNA_Lib 4994 ENCFF081DDG HiSeq 2500 2016-10-19T05:20:03.457807+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039zBQ036935yFJpkGKGQJq ENCSR197XDQ https://www.encodeproject.org/experiments/ENCSR197XDQ "histone,histone modification,broad histone mark" H3F3A-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF097LMW https://www.encodeproject.org/files/ENCFF097LMW/@@download/ENCFF097LMW.bam ENCFF111XIR https://www.encodeproject.org/files/ENCFF111XIR/@@download/ENCFF111XIR.bam 43.1 M 0 42.0 M 0.974 SE 76 36 36 0.0 M 31.7 M 30.3 M 0.704 0.96 0.96 23.15 165 1.02 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/41e1d1aa-a900-4df4-8340-a4f8ad788985/@@download/cross_correlation_plot/ENCFF440GHW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB638NXU bradley-bernstein:DNA_Lib 6020 ENCFF440GHW HiSeq 2000 2016-10-25T03:20:23.798758+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0585kQ03692ZB9QBj36jB8B ENCSR197XDQ https://www.encodeproject.org/experiments/ENCSR197XDQ "histone,histone modification,broad histone mark" H3F3A-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF257ZZL https://www.encodeproject.org/files/ENCFF257ZZL/@@download/ENCFF257ZZL.bam ENCFF201RUW https://www.encodeproject.org/files/ENCFF201RUW/@@download/ENCFF201RUW.bam 33.3 M 0 32.7 M 0.981 SE 76 36 36 0.0 M 25.1 M 21.0 M 0.631 0.84 0.83 5.78 190 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/76d7addb-52bb-41e0-9e31-ba04978f7f90/@@download/cross_correlation_plot/ENCFF453AHB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB249KVL bradley-bernstein:DNA_Lib 6023 ENCFF453AHB HiSeq 2000 2016-10-25T03:19:09.908556+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0585xj03692ZB9QBj36jB8X ENCSR752UOD https://www.encodeproject.org/experiments/ENCSR752UOD "histone,histone modification,narrow histone mark" H3K27ac-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF692SZU https://www.encodeproject.org/files/ENCFF692SZU/@@download/ENCFF692SZU.bam ENCFF653IOS https://www.encodeproject.org/files/ENCFF653IOS/@@download/ENCFF653IOS.bam 106.1 M 0 101.5 M 0.956 SE "76,36" 36 36 0.0 M 83.1 M 63.0 M 0.594 0.77 0.82 6.53 195 1.30 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c7f5a8f-39ad-4ed3-974c-11978e1b0216/@@download/cross_correlation_plot/ENCFF337CJH-ENCFF303DDV_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB632NJV,ENCLB356TON" "bradley-bernstein:DNA_Lib 6278,bradley-bernstein:DNA_Lib 3812" "ENCFF303DDV,ENCFF337CJH" "HiSeq 2000,HiSeq 2500" 2016-10-25T05:07:43.633897+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07BB5003696Y9jfbG3VZYF6 ENCSR752UOD https://www.encodeproject.org/experiments/ENCSR752UOD "histone,histone modification,narrow histone mark" H3K27ac-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF096GIM https://www.encodeproject.org/files/ENCFF096GIM/@@download/ENCFF096GIM.bam ENCFF378FRQ https://www.encodeproject.org/files/ENCFF378FRQ/@@download/ENCFF378FRQ.bam 53.8 M 0 51.3 M 0.954 SE 36 36 native 0.0 M 41.4 M 20.6 M 0.383 0.54 0.53 2.15 215 1.29 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/475013b6-26cc-47b1-b256-66a99f468a77/@@download/cross_correlation_plot/ENCFF787RSQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB179AON bradley-bernstein:DNA_Lib 5001 ENCFF787RSQ HiSeq 2000 2016-10-19T05:17:48.622889+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039yxj0369P3fb6Yb3bpy97 ENCSR761DLU https://www.encodeproject.org/experiments/ENCSR761DLU "histone,histone modification,broad histone mark" H3K27me3-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF519ABK https://www.encodeproject.org/files/ENCFF519ABK/@@download/ENCFF519ABK.bam ENCFF908TWG https://www.encodeproject.org/files/ENCFF908TWG/@@download/ENCFF908TWG.bam 38.5 M 0 36.9 M 0.958 SE 36 36 36 0.0 M 29.2 M 12.5 M 0.324 0.46 0.45 1.91 175 1.03 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/55ca85fb-e2d7-44df-b9d4-600f43269eec/@@download/cross_correlation_plot/ENCFF250WAH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB635UZE bradley-bernstein:DNA_Lib 5003 ENCFF250WAH HiSeq 2000 2016-10-26T04:35:47.905095+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07xb9003693F6GvgxF23j5p ENCSR761DLU https://www.encodeproject.org/experiments/ENCSR761DLU "histone,histone modification,broad histone mark" H3K27me3-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF351EJX https://www.encodeproject.org/files/ENCFF351EJX/@@download/ENCFF351EJX.bam ENCFF142MEV https://www.encodeproject.org/files/ENCFF142MEV/@@download/ENCFF142MEV.bam 80.0 M 0 76.1 M 0.950 SE "76,36" 36 36 0.0 M 59.1 M 48.0 M 0.600 0.82 0.81 5.28 180 1.02 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/b27c0633-631a-4d7f-a587-2fd27816dd3f/@@download/cross_correlation_plot/ENCFF738ERP-ENCFF134NCG-ENCFF023EPH_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB425PRL bradley-bernstein:DNA_Lib 3811 "ENCFF134NCG,ENCFF738ERP,ENCFF023EPH" "HiSeq 2000,HiSeq 2500" 2016-10-25T04:54:52.011441+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07B2G803692zXjp9j3FqkGk ENCSR610IYQ https://www.encodeproject.org/experiments/ENCSR610IYQ "histone,histone modification,broad histone mark" H3K36me3-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF248HAI https://www.encodeproject.org/files/ENCFF248HAI/@@download/ENCFF248HAI.bam ENCFF728JRA https://www.encodeproject.org/files/ENCFF728JRA/@@download/ENCFF728JRA.bam 55.5 M 0 52.9 M 0.952 SE "76,36" 36 36 0.0 M 38.5 M 36.0 M 0.648 0.94 0.94 15.94 140 1.02 0.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/02224bb6-87ff-4040-95dc-920db4d99931/@@download/cross_correlation_plot/ENCFF147WQG-ENCFF389PKW-ENCFF082PFU_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB900USU bradley-bernstein:DNA_Lib 3813 "ENCFF389PKW,ENCFF082PFU,ENCFF147WQG" "HiSeq 2000,HiSeq 2500" 2016-10-25T05:06:55.873611+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07B3g003692zXjp9j3FqkJ5 ENCSR610IYQ https://www.encodeproject.org/experiments/ENCSR610IYQ "histone,histone modification,broad histone mark" H3K36me3-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF115EOK https://www.encodeproject.org/files/ENCFF115EOK/@@download/ENCFF115EOK.bam ENCFF922QPP https://www.encodeproject.org/files/ENCFF922QPP/@@download/ENCFF922QPP.bam 68.1 M 0 65.3 M 0.959 SE 36 36 native 0.0 M 50.9 M 31.8 M 0.467 0.64 0.66 3.16 190 1.02 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/a99742cd-3ac7-456f-b323-26444f832649/@@download/cross_correlation_plot/ENCFF819ITL-ENCFF055OLK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB970FUJ,ENCLB677PZB" "bradley-bernstein:DNA_Lib 5000,bradley-bernstein:DNA_Lib 5099" "ENCFF819ITL,ENCFF055OLK" "HiSeq 2000,HiSeq 2500" 2016-10-19T05:19:16.052938+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039z0003690fVXfKk3bqXvV ENCSR493NBY https://www.encodeproject.org/experiments/ENCSR493NBY "histone,histone modification,broad histone mark" H3K4me1-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF470UYO https://www.encodeproject.org/files/ENCFF470UYO/@@download/ENCFF470UYO.bam ENCFF738IOY https://www.encodeproject.org/files/ENCFF738IOY/@@download/ENCFF738IOY.bam 80.7 M 0 77.3 M 0.958 SE "76,36" 36 36 0.0 M 62.5 M 56.7 M 0.703 0.91 0.91 11.87 205 1.09 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/753e7a03-f1ca-4fc8-b8f2-57b9e90137ce/@@download/cross_correlation_plot/ENCFF415RHX-ENCFF461WBE-ENCFF522RPS_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB115TEN bradley-bernstein:DNA_Lib 3808 "ENCFF522RPS,ENCFF461WBE,ENCFF415RHX" "HiSeq 2000,HiSeq 2500" 2016-10-25T04:49:47.053934+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079ZzQ03696Q3xXf4g8x5xX ENCSR493NBY https://www.encodeproject.org/experiments/ENCSR493NBY "histone,histone modification,broad histone mark" H3K4me1-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF556EUL https://www.encodeproject.org/files/ENCFF556EUL/@@download/ENCFF556EUL.bam ENCFF608VRO https://www.encodeproject.org/files/ENCFF608VRO/@@download/ENCFF608VRO.bam 84.7 M 0 81.2 M 0.959 SE "76,36" 36 36 0.0 M 66.3 M 46.2 M 0.546 0.70 0.69 3.01 155 1.05 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a660026-0f16-4c92-92a4-c4015480f54a/@@download/cross_correlation_plot/ENCFF197FAY-ENCFF083FLF-ENCFF428DVP_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB388RTX bradley-bernstein:DNA_Lib 4995 "ENCFF197FAY,ENCFF428DVP,ENCFF083FLF" HiSeq 2500 2016-10-25T04:49:50.987778+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079b7803693jfk2F435b9ZF ENCSR875KOJ https://www.encodeproject.org/experiments/ENCSR875KOJ "histone,histone modification,narrow histone mark" H3K4me2-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF281GNB https://www.encodeproject.org/files/ENCFF281GNB/@@download/ENCFF281GNB.bam ENCFF318MXE https://www.encodeproject.org/files/ENCFF318MXE/@@download/ENCFF318MXE.bam 58.5 M 0 56.2 M 0.960 SE 36 36 native 0.0 M 45.5 M 42.0 M 0.717 0.94 0.95 20.69 190 1.24 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/9459b09d-ae8d-419a-bd10-da6fd1d519a5/@@download/cross_correlation_plot/ENCFF002AUN-ENCFF002ACY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB834MSF,ENCLB980HCX" "bradley-bernstein:DNA_Lib 3809,bradley-bernstein:DNA_Lib 5008" "ENCFF002AUN,ENCFF002ACY" "HiSeq 2000,HiSeq 2500" 2016-10-26T04:37:45.287981+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07xZbQ0369P876f29P7Pj0f ENCSR875KOJ https://www.encodeproject.org/experiments/ENCSR875KOJ "histone,histone modification,narrow histone mark" H3K4me2-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF927QFK https://www.encodeproject.org/files/ENCFF927QFK/@@download/ENCFF927QFK.bam ENCFF270JLT https://www.encodeproject.org/files/ENCFF270JLT/@@download/ENCFF270JLT.bam 87.8 M 0 84.0 M 0.957 SE 36 36 native 0.0 M 68.7 M 49.8 M 0.567 0.76 0.79 5.69 205 1.18 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/8946627d-0111-4e36-acf2-a9587fc8c098/@@download/cross_correlation_plot/ENCFF870LBH-ENCFF870JII-ENCFF002ACV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB352TFP,ENCLB804UYC,ENCLB125APN" "bradley-bernstein:DNA_Lib 5006,bradley-bernstein:DNA_Lib 5005,bradley-bernstein:DNA_Lib 5002" "ENCFF870LBH,ENCFF002ACV,ENCFF870JII" "HiSeq 2000,HiSeq 2500" 2016-10-19T16:36:35.425788+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q76003690fVXfKk3bqZ3P ENCSR985MIB https://www.encodeproject.org/experiments/ENCSR985MIB "histone,histone modification,narrow histone mark" H3K4me3-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF716OCC https://www.encodeproject.org/files/ENCFF716OCC/@@download/ENCFF716OCC.bam ENCFF326DNJ https://www.encodeproject.org/files/ENCFF326DNJ/@@download/ENCFF326DNJ.bam 47.3 M 0 45.6 M 0.965 SE "76,36" 36 36 0.0 M 35.7 M 32.1 M 0.679 0.90 0.92 13.44 190 1.46 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/6efc38b9-4101-473f-b7cb-c4d0363da6fa/@@download/cross_correlation_plot/ENCFF768PAZ-ENCFF298UCU-ENCFF211APE_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB480UNK bradley-bernstein:DNA_Lib 3810 "ENCFF768PAZ,ENCFF211APE,ENCFF298UCU" "HiSeq 2000,HiSeq 2500" 2016-10-25T04:45:27.749174+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079QVj0369F5BJQYVy18J2v ENCSR985MIB https://www.encodeproject.org/experiments/ENCSR985MIB "histone,histone modification,narrow histone mark" H3K4me3-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF371XST https://www.encodeproject.org/files/ENCFF371XST/@@download/ENCFF371XST.bam ENCFF208WNN https://www.encodeproject.org/files/ENCFF208WNN/@@download/ENCFF208WNN.bam 17.3 M 0 16.9 M 0.976 SE "76,36" 36 36 0.0 M 13.7 M 12.4 M 0.716 0.94 0.94 17.80 240 1.60 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/43f1bead-42ab-4f6e-8bc6-7b0681737367/@@download/cross_correlation_plot/ENCFF020LCP-ENCFF792HDC-ENCFF923ABZ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB268FCU bradley-bernstein:DNA_Lib 4998 "ENCFF020LCP,ENCFF792HDC,ENCFF923ABZ" HiSeq 2500 2016-10-25T04:44:06.830326+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079Xx803693fqZYX43J15B8 ENCSR059ICA https://www.encodeproject.org/experiments/ENCSR059ICA "histone,histone modification,broad histone mark" H3K79me2-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF557SAR https://www.encodeproject.org/files/ENCFF557SAR/@@download/ENCFF557SAR.bam ENCFF104XVS https://www.encodeproject.org/files/ENCFF104XVS/@@download/ENCFF104XVS.bam 12.7 M 0 12.0 M 0.944 SE 36 36 native 0.0 M 9.2 M 9.0 M 0.707 0.98 0.98 42.57 110 1.07 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/547a7122-7f28-4e30-9d95-f32f3903dfda/@@download/cross_correlation_plot/ENCFF022HZP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB682BPE bradley-bernstein:DNA_Lib 3818 ENCFF022HZP HiSeq 2000 2017-01-23T20:03:33.684920+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2331bj03690f3z88kY3gY1g ENCSR059ICA https://www.encodeproject.org/experiments/ENCSR059ICA "histone,histone modification,broad histone mark" H3K79me2-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF218HMQ https://www.encodeproject.org/files/ENCFF218HMQ/@@download/ENCFF218HMQ.bam ENCFF631VMO https://www.encodeproject.org/files/ENCFF631VMO/@@download/ENCFF631VMO.bam 77.1 M 0 75.2 M 0.977 SE "76,36" 36 36 0.0 M 59.8 M 46.5 M 0.603 0.82 0.83 5.97 0 1.05 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/382ee5aa-dbc1-4750-a2b2-dc4886655369/@@download/cross_correlation_plot/ENCFF004XWK-ENCFF161ZED-ENCFF402WSG_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB296HBR bradley-bernstein:DNA_Lib 4991 "ENCFF161ZED,ENCFF402WSG,ENCFF004XWK" HiSeq 2500 2016-10-25T04:50:38.649519+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079j7j03691KQ6pz1vv37z5 ENCSR056UBA https://www.encodeproject.org/experiments/ENCSR056UBA "histone,histone modification,narrow histone mark" H3K9ac-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF736GWK https://www.encodeproject.org/files/ENCFF736GWK/@@download/ENCFF736GWK.bam ENCFF688QWO https://www.encodeproject.org/files/ENCFF688QWO/@@download/ENCFF688QWO.bam 43.3 M 0 37.4 M 0.865 SE "76,36" 36 36 0.0 M 30.9 M 22.3 M 0.515 0.73 0.75 4.11 245 1.56 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/c862c14a-a264-4338-b551-e59e1e6c1b9d/@@download/cross_correlation_plot/ENCFF564IMY-ENCFF440EIF-ENCFF815TBB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB286MNG bradley-bernstein:DNA_Lib 3815 "ENCFF564IMY,ENCFF440EIF,ENCFF815TBB" "HiSeq 2000,HiSeq 2500" 2016-10-25T04:46:54.568275+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079Z8003691KQ6pz1vv37v5 ENCSR056UBA https://www.encodeproject.org/experiments/ENCSR056UBA "histone,histone modification,narrow histone mark" H3K9ac-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF853PXP https://www.encodeproject.org/files/ENCFF853PXP/@@download/ENCFF853PXP.bam ENCFF747ZMI https://www.encodeproject.org/files/ENCFF747ZMI/@@download/ENCFF747ZMI.bam 60.3 M 0 59.0 M 0.978 SE 36 36 36 0.0 M 47.5 M 16.0 M 0.266 0.34 0.32 1.58 200 1.08 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/daa20b10-0154-4fdd-9754-f1014cadef99/@@download/cross_correlation_plot/ENCFF921PCJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB272LZL bradley-bernstein:DNA_Lib 4996 ENCFF921PCJ HiSeq 2500 2016-10-25T04:47:07.670718+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079ZGQ0369F2Ky8GGFkZv8f ENCSR374RZR https://www.encodeproject.org/experiments/ENCSR374RZR "histone,histone modification,broad histone mark" H3K9me2-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF787UIS https://www.encodeproject.org/files/ENCFF787UIS/@@download/ENCFF787UIS.bam ENCFF554DXO https://www.encodeproject.org/files/ENCFF554DXO/@@download/ENCFF554DXO.bam 20.9 M 0 19.8 M 0.948 SE 36 36 native 0.0 M 14.7 M 14.1 M 0.676 0.96 0.96 27.56 200 1.02 0.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/6470c691-2f5d-41de-8423-251545a09633/@@download/cross_correlation_plot/ENCFF515JGH-ENCFF029XPN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB271CJM bradley-bernstein:DNA_Lib 5100 "ENCFF029XPN,ENCFF515JGH" HiSeq 2000 2016-11-05T17:39:46.622820+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjYy80369349Kqpx8PZXvB ENCSR374RZR https://www.encodeproject.org/experiments/ENCSR374RZR "histone,histone modification,broad histone mark" H3K9me2-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF827KQX https://www.encodeproject.org/files/ENCFF827KQX/@@download/ENCFF827KQX.bam ENCFF066YIF https://www.encodeproject.org/files/ENCFF066YIF/@@download/ENCFF066YIF.bam 29.1 M 0 27.9 M 0.962 SE 76 36 36 0.0 M 21.3 M 19.9 M 0.685 0.93 0.94 15.49 215 1.01 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/093f2936-ef47-4ac8-abf8-36b1533f7c53/@@download/cross_correlation_plot/ENCFF574GCY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB872LQI bradley-bernstein:DNA_Lib 6537 ENCFF574GCY HiSeq 2000 2017-01-10T23:37:40.756558+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1pZYzj0369BjXJg2ZYfjFyG ENCSR999WHE https://www.encodeproject.org/experiments/ENCSR999WHE "histone,histone modification,broad histone mark" H3K9me3-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF989LTL https://www.encodeproject.org/files/ENCFF989LTL/@@download/ENCFF989LTL.bam ENCFF693FID https://www.encodeproject.org/files/ENCFF693FID/@@download/ENCFF693FID.bam 40.8 M 0 39.9 M 0.979 SE 36 36 native 0.0 M 28.1 M 21.5 M 0.527 0.77 0.77 4.11 200 1.02 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e854d8f-062d-4e36-a832-aeab9883ec13/@@download/cross_correlation_plot/ENCFF656BIN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB899CNW bradley-bernstein:DNA_Lib 4999 ENCFF656BIN HiSeq 2500 2016-11-02T17:12:13.499703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GgZB803697G26QXjQxg5vF ENCSR999WHE https://www.encodeproject.org/experiments/ENCSR999WHE "histone,histone modification,broad histone mark" H3K9me3-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF524OAH https://www.encodeproject.org/files/ENCFF524OAH/@@download/ENCFF524OAH.bam ENCFF614EAS https://www.encodeproject.org/files/ENCFF614EAS/@@download/ENCFF614EAS.bam 89.8 M 0 84.4 M 0.941 SE 76 36 36 0.0 M 56.0 M 51.5 M 0.574 0.92 0.92 12.50 190 1.01 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e97dff8-3473-498a-bf5f-078280717537/@@download/cross_correlation_plot/ENCFF600JOS-ENCFF517BLK_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB532OUZ bradley-bernstein:DNA_Lib 3819 "ENCFF600JOS,ENCFF517BLK" HiSeq 2500 2016-10-25T04:52:29.592951+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079gKj03691KQ6pz1vv37y3 ENCSR639RHG https://www.encodeproject.org/experiments/ENCSR639RHG "histone,histone modification,broad histone mark" H4K20me1-human MCF-7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF674RIB https://www.encodeproject.org/files/ENCFF674RIB/@@download/ENCFF674RIB.bam ENCFF266EEH https://www.encodeproject.org/files/ENCFF266EEH/@@download/ENCFF266EEH.bam 78.1 M 0 73.1 M 0.935 SE "76,36" 36 36 0.0 M 57.2 M 40.3 M 0.516 0.71 0.71 3.45 240 1.02 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/7245310b-2549-4834-a228-d575b9fd0017/@@download/cross_correlation_plot/ENCFF475AEQ-ENCFF476VWW-ENCFF465RWE_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB730SMK bradley-bernstein:DNA_Lib 3816 "ENCFF475AEQ,ENCFF465RWE,ENCFF476VWW" "HiSeq 2000,HiSeq 2500" 2016-10-25T04:51:48.379265+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079kgj0369KYp8Kq8FK6xQ9 ENCSR639RHG https://www.encodeproject.org/experiments/ENCSR639RHG "histone,histone modification,broad histone mark" H4K20me1-human MCF-7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF234PYH https://www.encodeproject.org/files/ENCFF234PYH/@@download/ENCFF234PYH.bam ENCFF079XLI https://www.encodeproject.org/files/ENCFF079XLI/@@download/ENCFF079XLI.bam 36.3 M 0 35.3 M 0.972 SE 36 36 native 0.0 M 28.2 M 14.8 M 0.408 0.53 0.49 1.81 155 1.04 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/ceba5857-1a8d-41f0-8d24-097d95f76120/@@download/cross_correlation_plot/ENCFF528WDJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB855NYW bradley-bernstein:DNA_Lib 4992 ENCFF528WDJ HiSeq 2500 2016-11-04T21:03:38.706831+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0K0pGj03695kGp5Vkb1YF9J ENCSR287XMW https://www.encodeproject.org/experiments/ENCSR287XMW control Control-human mid-neurogenesis radial glial cells in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF231TXH https://www.encodeproject.org/files/ENCFF231TXH/@@download/ENCFF231TXH.bam ENCFF251JQE https://www.encodeproject.org/files/ENCFF251JQE/@@download/ENCFF251JQE.bam 33.9 M 0 32.2 M 0.950 SE 36 None 0.0 M 24.9 M 22.6 M 0.667 0.95 0.95 18.32 195 1.02 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a15f6f4-763d-464a-98a6-33be78747142/@@download/cross_correlation_plot/ENCFF243LBL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB057GFS bradley-bernstein:DNA_Lib 5072 ENCFF243LBL HiSeq 2500 2016-05-06T18:13:35.824241+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqB4803692Fy2Pk02vGV9b ENCSR287XMW https://www.encodeproject.org/experiments/ENCSR287XMW control Control-human mid-neurogenesis radial glial cells in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF277VON https://www.encodeproject.org/files/ENCFF277VON/@@download/ENCFF277VON.bam ENCFF495KCW https://www.encodeproject.org/files/ENCFF495KCW/@@download/ENCFF495KCW.bam 59.2 M 0 56.5 M 0.955 SE 36 None 0.0 M 40.4 M 39.8 M 0.673 0.99 0.99 94.84 -10 1.01 0.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/54918984-751b-4aa5-a533-92488bfa6b2b/@@download/cross_correlation_plot/ENCFF854BYF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB846ANE bradley-bernstein:DNA_Lib 3839 ENCFF854BYF HiSeq 2000 2016-05-06T18:15:02.347469+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqB5j036961GyjjQ2QP8GF ENCSR092TTO https://www.encodeproject.org/experiments/ENCSR092TTO "histone,histone modification,narrow histone mark" H3K27ac-human mid-neurogenesis radial glial cells in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF904HFU https://www.encodeproject.org/files/ENCFF904HFU/@@download/ENCFF904HFU.bam ENCFF120LAX https://www.encodeproject.org/files/ENCFF120LAX/@@download/ENCFF120LAX.bam 60.6 M 0 59.0 M 0.974 SE 76 36 36 0.0 M 49.2 M 25.7 M 0.424 0.52 0.50 1.90 235 1.22 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa249183-c67a-4394-8a3a-bd7ec1ae9bb2/@@download/cross_correlation_plot/ENCFF996HGW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB775XAW bradley-bernstein:DNA_Lib 6064 ENCFF996HGW HiSeq 2500 2017-01-13T23:18:31.136728+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vYXpQ03693821P0Y04zxg3 ENCSR092TTO https://www.encodeproject.org/experiments/ENCSR092TTO "histone,histone modification,narrow histone mark" H3K27ac-human mid-neurogenesis radial glial cells in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF081SEP https://www.encodeproject.org/files/ENCFF081SEP/@@download/ENCFF081SEP.bam ENCFF053SOH https://www.encodeproject.org/files/ENCFF053SOH/@@download/ENCFF053SOH.bam 35.1 M 0 32.7 M 0.933 SE 36 36 36 0.0 M 25.3 M 20.0 M 0.572 0.81 0.81 5.11 265 1.03 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7d5e1b1-1508-4ffa-bf22-cf99eebb7a91/@@download/cross_correlation_plot/ENCFF404YUQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB576BKZ bradley-bernstein:DNA_Lib 3111 ENCFF404YUQ HiSeq 2000 2017-01-13T22:20:08.027489+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1vYY0Q03694jVpv0X8F4GVy ENCSR113LFZ https://www.encodeproject.org/experiments/ENCSR113LFZ "histone,histone modification,broad histone mark" H3K27me3-human mid-neurogenesis radial glial cells in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF814DWR https://www.encodeproject.org/files/ENCFF814DWR/@@download/ENCFF814DWR.bam ENCFF338ULF https://www.encodeproject.org/files/ENCFF338ULF/@@download/ENCFF338ULF.bam 38.4 M 0 36.5 M 0.952 SE 36 36 native 0.0 M 27.3 M 16.9 M 0.441 0.65 0.65 2.88 250 1.04 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c0f19ee-e745-4dbf-a3be-4c7382566f1a/@@download/cross_correlation_plot/ENCFF837BUH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB409ZZR bradley-bernstein:DNA_Lib 3125 ENCFF837BUH HiSeq 2000 2016-12-14T22:51:58.872620+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1889Pj0369G1Z412B01Qv83 ENCSR113LFZ https://www.encodeproject.org/experiments/ENCSR113LFZ "histone,histone modification,broad histone mark" H3K27me3-human mid-neurogenesis radial glial cells in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF155RID https://www.encodeproject.org/files/ENCFF155RID/@@download/ENCFF155RID.bam ENCFF455KEO https://www.encodeproject.org/files/ENCFF455KEO/@@download/ENCFF455KEO.bam 31.5 M 0 30.7 M 0.975 SE 36 36 native 0.0 M 23.8 M 11.9 M 0.377 0.65 0.64 2.71 200 1.02 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/66390b5b-a6ba-4ae1-aa48-8dd545bdf89e/@@download/cross_correlation_plot/ENCFF165RVV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB561NTM bradley-bernstein:DNA_Lib 5048 ENCFF165RVV HiSeq 2500 2016-12-14T22:52:14.786546+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1889fj0369B26QY29p8pZ7Z ENCSR290EHP https://www.encodeproject.org/experiments/ENCSR290EHP "histone,histone modification,broad histone mark" H3K4me1-human mid-neurogenesis radial glial cells in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF283QGR https://www.encodeproject.org/files/ENCFF283QGR/@@download/ENCFF283QGR.bam ENCFF827YHM https://www.encodeproject.org/files/ENCFF827YHM/@@download/ENCFF827YHM.bam 31.1 M 0 30.4 M 0.978 SE 30 30 native 0.0 M 24.9 M 23.4 M 0.754 0.94 0.94 16.37 185 1.05 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/1fca6c46-0f6f-4527-b871-dac1d77028da/@@download/cross_correlation_plot/ENCFF433UNT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB027AOW bradley-bernstein:DNA_Lib 6063 ENCFF433UNT HiSeq 2500 2017-01-31T20:57:04.647450+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28F9zQ036904kff5bQ8z0k7 ENCSR290EHP https://www.encodeproject.org/experiments/ENCSR290EHP "histone,histone modification,broad histone mark" H3K4me1-human mid-neurogenesis radial glial cells in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF988CVI https://www.encodeproject.org/files/ENCFF988CVI/@@download/ENCFF988CVI.bam ENCFF297FGS https://www.encodeproject.org/files/ENCFF297FGS/@@download/ENCFF297FGS.bam 50.4 M 0 46.8 M 0.929 SE 36 36 native 0.0 M 35.7 M 32.3 M 0.642 0.91 0.91 11.44 230 1.02 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbd73f74-85b1-46ae-bc27-2ae1941e9ad0/@@download/cross_correlation_plot/ENCFF964WRW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB598GJQ bradley-bernstein:DNA_Lib 3108 ENCFF964WRW HiSeq 2000 2017-01-07T00:49:25.171735+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1j1QQ003693x7fkK10qGkgf ENCSR922CAT https://www.encodeproject.org/experiments/ENCSR922CAT "histone,histone modification,narrow histone mark" H3K4me3-human mid-neurogenesis radial glial cells in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF742SZD https://www.encodeproject.org/files/ENCFF742SZD/@@download/ENCFF742SZD.bam ENCFF596NPW https://www.encodeproject.org/files/ENCFF596NPW/@@download/ENCFF596NPW.bam 37.2 M 0 35.3 M 0.950 SE 36 36 native 0.0 M 26.3 M 25.4 M 0.684 0.97 0.98 42.82 195 1.19 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/153678bc-59b6-4e05-96bd-971ec706ea86/@@download/cross_correlation_plot/ENCFF995NAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB894KQP bradley-bernstein:DNA_Lib 3834 ENCFF995NAN HiSeq 2000 2016-11-17T19:19:56.171747+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0fxzZQ03694Bk0GyJVgqvFB ENCSR922CAT https://www.encodeproject.org/experiments/ENCSR922CAT "histone,histone modification,narrow histone mark" H3K4me3-human mid-neurogenesis radial glial cells in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF340SIN https://www.encodeproject.org/files/ENCFF340SIN/@@download/ENCFF340SIN.bam ENCFF052BBK https://www.encodeproject.org/files/ENCFF052BBK/@@download/ENCFF052BBK.bam 22.7 M 0 22.2 M 0.974 SE 36 36 native 0.0 M 17.8 M 6.1 M 0.267 0.49 0.50 2.03 215 1.13 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb627945-7861-44cf-b318-9f29a25d2148/@@download/cross_correlation_plot/ENCFF539YTE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB595GMR bradley-bernstein:DNA_Lib 5050 ENCFF539YTE HiSeq 2500 2016-11-17T19:18:30.325684+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0fxzk0036965VVKZk5GJKBk ENCSR691BNO https://www.encodeproject.org/experiments/ENCSR691BNO "histone,histone modification,broad histone mark" H3K9me3-human mid-neurogenesis radial glial cells in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF505KDP https://www.encodeproject.org/files/ENCFF505KDP/@@download/ENCFF505KDP.bam ENCFF230BWU https://www.encodeproject.org/files/ENCFF230BWU/@@download/ENCFF230BWU.bam 75.6 M 0 73.9 M 0.977 SE 36 36 native 0.0 M 55.8 M 33.3 M 0.440 0.67 0.67 3.09 205 1.02 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/373dcdc2-174a-42d8-b4ec-3994eed014fd/@@download/cross_correlation_plot/ENCFF858GGV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB264XWF bradley-bernstein:DNA_Lib 5051 ENCFF858GGV HiSeq 2500 2016-12-14T22:55:22.307979+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F188GPj0369F00q32BFF74BF ENCSR691BNO https://www.encodeproject.org/experiments/ENCSR691BNO "histone,histone modification,broad histone mark" H3K9me3-human mid-neurogenesis radial glial cells in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF209TJF https://www.encodeproject.org/files/ENCFF209TJF/@@download/ENCFF209TJF.bam ENCFF802NLD https://www.encodeproject.org/files/ENCFF802NLD/@@download/ENCFF802NLD.bam 36.5 M 0 35.0 M 0.958 SE 36 36 native 0.0 M 22.0 M 21.7 M 0.594 0.99 0.99 78.73 175 1.01 0.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/18973ba6-b2ca-495c-a90c-11d19d02427b/@@download/cross_correlation_plot/ENCFF265PXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB391SGN bradley-bernstein:DNA_Lib 3835 ENCFF265PXG HiSeq 2000 2016-12-14T22:54:47.515319+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F188GjQ0369J92qZ2Bf6232B ENCSR264HOB https://www.encodeproject.org/experiments/ENCSR264HOB control Control-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF186KKP https://www.encodeproject.org/files/ENCFF186KKP/@@download/ENCFF186KKP.bam ENCFF880UAU https://www.encodeproject.org/files/ENCFF880UAU/@@download/ENCFF880UAU.bam 83.2 M 0 81.5 M 0.979 SE "76,36" 36 36 0.0 M 62.1 M 60.0 M 0.720 0.97 0.97 32.65 160 1.01 0.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/83563377-fa5e-419e-b841-6d51d46bcf0d/@@download/cross_correlation_plot/ENCFF910KYS-ENCFF466ORS-ENCFF630PTQ-ENCFF169TIB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB019PEH,ENCLB004TFB" "bradley-bernstein:DNA_Lib 5131,bradley-bernstein:DNA_Lib 4580" "ENCFF630PTQ,ENCFF466ORS,ENCFF169TIB,ENCFF910KYS" HiSeq 2500 2016-09-27T20:56:39.439596+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzb9zzQ0369P7JZf0kbVv2gY ENCSR264HOB https://www.encodeproject.org/experiments/ENCSR264HOB control Control-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF550VRT https://www.encodeproject.org/files/ENCFF550VRT/@@download/ENCFF550VRT.bam ENCFF438KJC https://www.encodeproject.org/files/ENCFF438KJC/@@download/ENCFF438KJC.bam 72.8 M 0 71.5 M 0.982 SE 36 36 None 0.0 M 54.2 M 52.5 M 0.720 0.97 0.97 33.03 150 1.01 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/c448b2b9-b3fe-4fd6-a17e-8d7ef1e2fa83/@@download/cross_correlation_plot/ENCFF137UFY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB955OVO bradley-bernstein:DNA_Lib 5563 ENCFF137UFY HiSeq 2500 2016-05-06T18:16:48.826384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx2BVjj03699Zg51B1XjG67K ENCSR402IDP https://www.encodeproject.org/experiments/ENCSR402IDP "transcription factor,RNA binding protein" CTCF-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF511OFO https://www.encodeproject.org/files/ENCFF511OFO/@@download/ENCFF511OFO.bam ENCFF357JMW https://www.encodeproject.org/files/ENCFF357JMW/@@download/ENCFF357JMW.bam 73.8 M 0 72.2 M 0.979 SE 36 36 native 0.0 M 56.3 M 52.6 M 0.713 0.94 0.94 20.34 200 1.23 2.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/98653bbb-f1cf-4dd2-baeb-ae8077fdeb52/@@download/cross_correlation_plot/ENCFF582BLP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB636JTM bradley-bernstein:DNA_Lib 5558 ENCFF582BLP HiSeq 2500 2016-08-09T15:16:49.418919+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQGjQ03692xfq5KjfP6Z73 ENCSR402IDP https://www.encodeproject.org/experiments/ENCSR402IDP "transcription factor,RNA binding protein" CTCF-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF377EHJ https://www.encodeproject.org/files/ENCFF377EHJ/@@download/ENCFF377EHJ.bam ENCFF484SSQ https://www.encodeproject.org/files/ENCFF484SSQ/@@download/ENCFF484SSQ.bam 47.5 M 0 46.0 M 0.968 SE "76,36" 36 36 0.0 M 35.4 M 33.5 M 0.704 0.96 0.96 30.51 205 1.29 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/08b72d63-d206-4f21-8d4f-e166847b1486/@@download/cross_correlation_plot/ENCFF344KYL-ENCFF674DQN-ENCFF908KEB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB925HKY bradley-bernstein:DNA_Lib 4579 "ENCFF674DQN,ENCFF908KEB,ENCFF344KYL" HiSeq 2500 2016-10-14T02:19:12.167345+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzxJf80369KPK0fF5f4Kkpk ENCSR698CKZ https://www.encodeproject.org/experiments/ENCSR698CKZ "histone,histone modification,narrow histone mark" H2AFZ-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF269BPM https://www.encodeproject.org/files/ENCFF269BPM/@@download/ENCFF269BPM.bam ENCFF757JCN https://www.encodeproject.org/files/ENCFF757JCN/@@download/ENCFF757JCN.bam 72.6 M 0 70.8 M 0.975 SE 36 None 0.0 M 55.3 M 53.7 M 0.739 0.97 0.97 40.07 185 1.03 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/b8614f93-7315-43bf-929c-43531aead3c3/@@download/cross_correlation_plot/ENCFF980VWU-ENCFF288ZNK-ENCFF600PSI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB163CLJ,ENCLB848ITN,ENCLB549IPX" "bradley-bernstein:DNA_Lib 5130,bradley-bernstein:DNA_Lib 4566,bradley-bernstein:DNA_Lib 5127" "ENCFF288ZNK,ENCFF600PSI,ENCFF980VWU" HiSeq 2500 2016-06-01T18:38:25.021395+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx7073j036970ZFQ04JJZF8x ENCSR698CKZ https://www.encodeproject.org/experiments/ENCSR698CKZ "histone,histone modification,narrow histone mark" H2AFZ-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF399AMF https://www.encodeproject.org/files/ENCFF399AMF/@@download/ENCFF399AMF.bam ENCFF247GGF https://www.encodeproject.org/files/ENCFF247GGF/@@download/ENCFF247GGF.bam 70.3 M 0 67.2 M 0.956 SE 36 None 0.0 M 51.0 M 49.6 M 0.706 0.97 0.97 39.64 210 1.03 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/ea8d5357-55f6-4cbc-adf1-daad76b18f66/@@download/cross_correlation_plot/ENCFF338USW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB981EEH bradley-bernstein:DNA_Lib 5546 ENCFF338USW HiSeq 2500 2016-06-01T18:39:00.566003+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx7076Q036970ZFQ04JJZF96 ENCSR562SRW https://www.encodeproject.org/experiments/ENCSR562SRW "histone,histone modification,broad histone mark" H3F3A-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF560BDY https://www.encodeproject.org/files/ENCFF560BDY/@@download/ENCFF560BDY.bam ENCFF099VET https://www.encodeproject.org/files/ENCFF099VET/@@download/ENCFF099VET.bam 67.4 M 0 66.0 M 0.980 SE 36 36 36 0.0 M 51.1 M 45.6 M 0.676 0.89 0.89 9.26 180 1.02 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b40946a-05a0-4876-b271-7842e5c9df3c/@@download/cross_correlation_plot/ENCFF337KDV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB599YHB bradley-bernstein:DNA_Lib 5559 ENCFF337KDV HiSeq 2500 2016-09-27T20:51:57.588786+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB1zj03698jxvY29Fk4P2X ENCSR562SRW https://www.encodeproject.org/experiments/ENCSR562SRW "histone,histone modification,broad histone mark" H3F3A-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF553FJF https://www.encodeproject.org/files/ENCFF553FJF/@@download/ENCFF553FJF.bam ENCFF622YNB https://www.encodeproject.org/files/ENCFF622YNB/@@download/ENCFF622YNB.bam 42.7 M 0 41.8 M 0.979 SE 76 36 36 0.0 M 32.7 M 20.9 M 0.489 0.64 0.61 2.33 175 1.04 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/346265ca-8f86-438b-8c7e-029526b471a7/@@download/cross_correlation_plot/ENCFF064APK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB617IOF bradley-bernstein:DNA_Lib 5984 ENCFF064APK HiSeq 2500 2016-09-27T20:50:25.590189+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB23003697bxx77JFk25xz ENCSR758OEC https://www.encodeproject.org/experiments/ENCSR758OEC "histone,histone modification,narrow histone mark" H3K27ac-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF605DAC https://www.encodeproject.org/files/ENCFF605DAC/@@download/ENCFF605DAC.bam ENCFF185IQV https://www.encodeproject.org/files/ENCFF185IQV/@@download/ENCFF185IQV.bam 29.1 M 0 28.0 M 0.961 SE 36 None 0.0 M 21.9 M 21.6 M 0.743 0.99 0.99 154.10 180 1.06 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/99cf63a9-eb0b-406e-94c3-4cef63628118/@@download/cross_correlation_plot/ENCFF630ZFU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB399ALW bradley-bernstein:DNA_Lib 4567 ENCFF630ZFU HiSeq 2500 2016-06-01T18:37:00.565550+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx706P8036963B4jxk7b9K5B ENCSR758OEC https://www.encodeproject.org/experiments/ENCSR758OEC "histone,histone modification,narrow histone mark" H3K27ac-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF937ZTU https://www.encodeproject.org/files/ENCFF937ZTU/@@download/ENCFF937ZTU.bam ENCFF598TRS https://www.encodeproject.org/files/ENCFF598TRS/@@download/ENCFF598TRS.bam 72.5 M 0 69.4 M 0.958 SE 36 None 0.0 M 55.5 M 46.6 M 0.643 0.85 0.88 10.60 215 1.39 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf553ef0-b168-4133-8b00-f27b5a9218fc/@@download/cross_correlation_plot/ENCFF783XFU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB812WET bradley-bernstein:DNA_Lib 5547 ENCFF783XFU HiSeq 2500 2016-06-01T18:38:59.652032+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx706VQ0369Pf540zk7xKqjz ENCSR404LJZ https://www.encodeproject.org/experiments/ENCSR404LJZ "histone,histone modification,broad histone mark" H3K27me3-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF712XDN https://www.encodeproject.org/files/ENCFF712XDN/@@download/ENCFF712XDN.bam ENCFF766FLW https://www.encodeproject.org/files/ENCFF766FLW/@@download/ENCFF766FLW.bam 41.3 M 0 40.4 M 0.980 SE 36 None 0.0 M 31.0 M 28.4 M 0.689 0.92 0.92 12.78 195 1.02 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e3ce4ac-cbac-4d30-b335-a38850fe0ae4/@@download/cross_correlation_plot/ENCFF708OIN-ENCFF553XHZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB061HGO,ENCLB427HVW" "bradley-bernstein:DNA_Lib 5076,bradley-bernstein:DNA_Lib 5129" "ENCFF553XHZ,ENCFF708OIN" HiSeq 2500 2016-06-14T05:33:41.013669+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPbxjQ0369GzZgFyQQ2GfbX ENCSR404LJZ https://www.encodeproject.org/experiments/ENCSR404LJZ "histone,histone modification,broad histone mark" H3K27me3-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF956YCD https://www.encodeproject.org/files/ENCFF956YCD/@@download/ENCFF956YCD.bam ENCFF493UXG https://www.encodeproject.org/files/ENCFF493UXG/@@download/ENCFF493UXG.bam 71.6 M 0 68.5 M 0.957 SE 36 None 0.0 M 51.6 M 47.5 M 0.664 0.92 0.92 13.06 175 1.01 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/afb82a94-999b-40d4-8355-e9ab3de3f9e4/@@download/cross_correlation_plot/ENCFF425JDD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB506NTI bradley-bernstein:DNA_Lib 5548 ENCFF425JDD HiSeq 2500 2016-06-14T05:35:00.948263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPbxq00369B0QYY1QQXVfgb ENCSR120LGC https://www.encodeproject.org/experiments/ENCSR120LGC "histone,histone modification,broad histone mark" H3K36me3-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF488DEA https://www.encodeproject.org/files/ENCFF488DEA/@@download/ENCFF488DEA.bam ENCFF391KGS https://www.encodeproject.org/files/ENCFF391KGS/@@download/ENCFF391KGS.bam 27.2 M 0 26.6 M 0.981 SE 76 36 36 0.0 M 20.6 M 18.4 M 0.677 0.89 0.89 8.81 185 1.02 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/cacc1c6b-f899-43cf-9b99-57c2f9fbc772/@@download/cross_correlation_plot/ENCFF627HXE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB790RMK bradley-bernstein:DNA_Lib 5980 ENCFF627HXE HiSeq 2000 2016-09-27T20:50:01.586470+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB0V003690YKgv65bVQ7FJ ENCSR120LGC https://www.encodeproject.org/experiments/ENCSR120LGC "histone,histone modification,broad histone mark" H3K36me3-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF162ZPO https://www.encodeproject.org/files/ENCFF162ZPO/@@download/ENCFF162ZPO.bam ENCFF740SSP https://www.encodeproject.org/files/ENCFF740SSP/@@download/ENCFF740SSP.bam 71.0 M 0 68.2 M 0.960 SE 36 36 36 0.0 M 50.7 M 49.6 M 0.698 0.98 0.98 48.81 190 1.01 0.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/8771d30b-e5ef-4b9b-b895-69a95458662e/@@download/cross_correlation_plot/ENCFF894VOV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB510QDT bradley-bernstein:DNA_Lib 5549 ENCFF894VOV HiSeq 2500 2016-09-27T20:52:33.728949+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB0b00369Pgg7635bg8kY7 ENCSR094VCE https://www.encodeproject.org/experiments/ENCSR094VCE "histone,histone modification,broad histone mark" H3K4me1-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF482YXU https://www.encodeproject.org/files/ENCFF482YXU/@@download/ENCFF482YXU.bam ENCFF672UEG https://www.encodeproject.org/files/ENCFF672UEG/@@download/ENCFF672UEG.bam 73.4 M 0 70.4 M 0.959 SE 36 None 0.0 M 53.5 M 51.9 M 0.707 0.97 0.97 37.00 195 1.03 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d27fb33-deb2-44f1-8292-4680feeba957/@@download/cross_correlation_plot/ENCFF709MXB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB396PYS bradley-bernstein:DNA_Lib 5550 ENCFF709MXB HiSeq 2500 2016-06-23T00:02:18.577353+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxbJqGQ0369J9V060ZbPFPzQ ENCSR094VCE https://www.encodeproject.org/experiments/ENCSR094VCE "histone,histone modification,broad histone mark" H3K4me1-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF771KPA https://www.encodeproject.org/files/ENCFF771KPA/@@download/ENCFF771KPA.bam ENCFF045AKC https://www.encodeproject.org/files/ENCFF045AKC/@@download/ENCFF045AKC.bam 78.6 M 0 76.1 M 0.968 SE "76,36" 36 36 0.0 M 60.0 M 58.5 M 0.744 0.98 0.98 53.71 175 1.03 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/42964223-295c-45ee-80b0-cce89fd7916e/@@download/cross_correlation_plot/ENCFF875RPA-ENCFF039TOU-ENCFF842WEN_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB927FOD bradley-bernstein:DNA_Lib 4570 "ENCFF875RPA,ENCFF842WEN,ENCFF039TOU" HiSeq 2500 2016-09-27T20:53:35.565298+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB0q00369Pgg7635bg8kYP ENCSR086YIH https://www.encodeproject.org/experiments/ENCSR086YIH "histone,histone modification,narrow histone mark" H3K4me2-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF258RDA https://www.encodeproject.org/files/ENCFF258RDA/@@download/ENCFF258RDA.bam ENCFF462BOT https://www.encodeproject.org/files/ENCFF462BOT/@@download/ENCFF462BOT.bam 24.0 M 0 23.2 M 0.967 SE 36 None 0.0 M 18.2 M 18.0 M 0.748 0.99 0.99 157.07 180 1.07 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/fce74195-5e03-4b87-a1d1-6998836a5640/@@download/cross_correlation_plot/ENCFF533RTZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB827VML bradley-bernstein:DNA_Lib 4571 ENCFF533RTZ HiSeq 2500 2016-06-01T18:36:16.717246+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx706k80369Pf540zk7xKqkB ENCSR086YIH https://www.encodeproject.org/experiments/ENCSR086YIH "histone,histone modification,narrow histone mark" H3K4me2-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF397QKY https://www.encodeproject.org/files/ENCFF397QKY/@@download/ENCFF397QKY.bam ENCFF570HGM https://www.encodeproject.org/files/ENCFF570HGM/@@download/ENCFF570HGM.bam 65.6 M 0 63.1 M 0.962 SE 36 None 0.0 M 49.1 M 46.9 M 0.714 0.96 0.96 24.11 215 1.11 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5db11bd-1d2e-41d0-812e-1c69751a6cf4/@@download/cross_correlation_plot/ENCFF469QKW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB959AIK bradley-bernstein:DNA_Lib 5551 ENCFF469QKW HiSeq 2500 2016-06-01T18:38:07.423503+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx706q80369Pf540zk7xKqkY ENCSR361FWQ https://www.encodeproject.org/experiments/ENCSR361FWQ "histone,histone modification,narrow histone mark" H3K4me3-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF842WXL https://www.encodeproject.org/files/ENCFF842WXL/@@download/ENCFF842WXL.bam ENCFF180XGZ https://www.encodeproject.org/files/ENCFF180XGZ/@@download/ENCFF180XGZ.bam 43.6 M 0 41.5 M 0.953 SE "76,36" 36 36 0.0 M 33.5 M 31.8 M 0.730 0.97 0.97 33.92 180 1.34 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d77019b-73a8-4a41-8027-a024d9103ff6/@@download/cross_correlation_plot/ENCFF310JTP-ENCFF755VRL-ENCFF575KIT_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB172BGC bradley-bernstein:DNA_Lib 4572 "ENCFF755VRL,ENCFF575KIT,ENCFF310JTP" HiSeq 2500 2016-09-27T20:54:21.894928+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB06Q0369Pgg7635bg8kXv ENCSR361FWQ https://www.encodeproject.org/experiments/ENCSR361FWQ "histone,histone modification,narrow histone mark" H3K4me3-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF967RUH https://www.encodeproject.org/files/ENCFF967RUH/@@download/ENCFF967RUH.bam ENCFF625QNB https://www.encodeproject.org/files/ENCFF625QNB/@@download/ENCFF625QNB.bam 67.3 M 0 64.4 M 0.957 SE 36 None 0.0 M 48.9 M 47.4 M 0.705 0.97 0.97 36.32 200 1.05 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6c3ac43-eed0-4bd0-b02d-29214b45d08a/@@download/cross_correlation_plot/ENCFF463MZE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB627GMD bradley-bernstein:DNA_Lib 5552 ENCFF463MZE HiSeq 2500 2016-06-01T18:38:34.483695+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx706fQ0369Kz1qj0x8FYXvB ENCSR542YRH https://www.encodeproject.org/experiments/ENCSR542YRH "histone,histone modification,broad histone mark" H3K79me2-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF299XOX https://www.encodeproject.org/files/ENCFF299XOX/@@download/ENCFF299XOX.bam ENCFF352QVZ https://www.encodeproject.org/files/ENCFF352QVZ/@@download/ENCFF352QVZ.bam 85.0 M 0 83.3 M 0.980 SE "76,36" 36 36 0.0 M 64.1 M 61.4 M 0.722 0.96 0.96 24.83 -5 1.02 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/e42ab530-80f9-473e-866c-865809c8b350/@@download/cross_correlation_plot/ENCFF147UMW-ENCFF462QJA-ENCFF856ORI_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB252IMH bradley-bernstein:DNA_Lib 5078 "ENCFF462QJA,ENCFF856ORI,ENCFF147UMW" HiSeq 2500 2016-10-06T15:47:56.731308+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzpvGb003699GXfjbQZ4gY95 ENCSR542YRH https://www.encodeproject.org/experiments/ENCSR542YRH "histone,histone modification,broad histone mark" H3K79me2-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF887PIA https://www.encodeproject.org/files/ENCFF887PIA/@@download/ENCFF887PIA.bam ENCFF297QZO https://www.encodeproject.org/files/ENCFF297QZO/@@download/ENCFF297QZO.bam 82.8 M 0 79.5 M 0.960 SE 36 36 36 0.0 M 60.2 M 57.6 M 0.695 0.96 0.96 25.78 -5 1.03 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/cbf92d72-d2a6-4bbe-bce8-e535065b7189/@@download/cross_correlation_plot/ENCFF794FAH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB485LRQ bradley-bernstein:DNA_Lib 5553 ENCFF794FAH HiSeq 2500 2016-09-27T20:52:50.198493+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzpgfkj0369Kz6P5Fb2XgzJQ ENCSR872PRJ https://www.encodeproject.org/experiments/ENCSR872PRJ "histone,histone modification,narrow histone mark" H3K9ac-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF744OCU https://www.encodeproject.org/files/ENCFF744OCU/@@download/ENCFF744OCU.bam ENCFF661QLO https://www.encodeproject.org/files/ENCFF661QLO/@@download/ENCFF661QLO.bam 70.8 M 0 67.5 M 0.953 SE 36 None 0.0 M 52.8 M 48.7 M 0.688 0.93 0.93 15.37 210 1.16 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/76e58239-0dde-4548-b75e-0861d00b2380/@@download/cross_correlation_plot/ENCFF680ACO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB011VJK bradley-bernstein:DNA_Lib 5554 ENCFF680ACO HiSeq 2500 2016-06-01T18:38:07.796819+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx706y803699PV1F3GJ1ZF5J ENCSR872PRJ https://www.encodeproject.org/experiments/ENCSR872PRJ "histone,histone modification,narrow histone mark" H3K9ac-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF552QRG https://www.encodeproject.org/files/ENCFF552QRG/@@download/ENCFF552QRG.bam ENCFF627PYY https://www.encodeproject.org/files/ENCFF627PYY/@@download/ENCFF627PYY.bam 48.6 M 0 47.3 M 0.974 SE "76,36" 36 36 0.0 M 36.0 M 35.0 M 0.721 0.98 0.98 55.78 175 1.04 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/038af536-26a3-4bb3-a3c0-65e35aedc41b/@@download/cross_correlation_plot/ENCFF511NEP-ENCFF943AFQ-ENCFF408BKW_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB584KAC bradley-bernstein:DNA_Lib 4574 "ENCFF943AFQ,ENCFF511NEP,ENCFF408BKW" HiSeq 2500 2016-09-27T20:54:18.375914+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB0G003692X3gj01bYPx8j ENCSR399VPY https://www.encodeproject.org/experiments/ENCSR399VPY "histone,histone modification,broad histone mark" H3K9me2-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF480IEA https://www.encodeproject.org/files/ENCFF480IEA/@@download/ENCFF480IEA.bam ENCFF115TLJ https://www.encodeproject.org/files/ENCFF115TLJ/@@download/ENCFF115TLJ.bam 46.2 M 0 45.7 M 0.988 SE 76 36 36 0.0 M 35.5 M 28.7 M 0.620 0.81 0.80 4.77 180 1.02 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/21607ecd-1050-47a4-9791-d5fcc107d08b/@@download/cross_correlation_plot/ENCFF878CMP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB056ZCH bradley-bernstein:DNA_Lib 5982 ENCFF878CMP HiSeq 2000 2016-09-27T20:50:47.655044+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB18003698Vfxx3V7ZbBp8 ENCSR399VPY https://www.encodeproject.org/experiments/ENCSR399VPY "histone,histone modification,broad histone mark" H3K9me2-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF755PKF https://www.encodeproject.org/files/ENCFF755PKF/@@download/ENCFF755PKF.bam ENCFF823MXJ https://www.encodeproject.org/files/ENCFF823MXJ/@@download/ENCFF823MXJ.bam 59.5 M 0 58.4 M 0.981 SE 36 36 36 0.0 M 44.1 M 42.6 M 0.716 0.97 0.97 30.20 180 1.01 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/01366d89-fef9-4e31-94de-b839bacabf3c/@@download/cross_correlation_plot/ENCFF066MNO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB534PGT bradley-bernstein:DNA_Lib 5555 ENCFF066MNO HiSeq 2500 2016-09-27T20:52:36.975387+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB1FQ0369138qzvV75YbB4 ENCSR461LTR https://www.encodeproject.org/experiments/ENCSR461LTR "histone,histone modification,broad histone mark" H3K9me3-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF090KZK https://www.encodeproject.org/files/ENCFF090KZK/@@download/ENCFF090KZK.bam ENCFF330KNF https://www.encodeproject.org/files/ENCFF330KNF/@@download/ENCFF330KNF.bam 54.1 M 0 53.0 M 0.980 SE 36 36 36 0.0 M 39.3 M 38.5 M 0.711 0.98 0.98 50.76 185 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/7edbf360-0094-482a-a9a8-defc07fea9ca/@@download/cross_correlation_plot/ENCFF442IIJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB792FEB bradley-bernstein:DNA_Lib 5556 ENCFF442IIJ HiSeq 2500 2016-09-27T20:52:18.004228+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB1080369Jb90yqk746KvV ENCSR461LTR https://www.encodeproject.org/experiments/ENCSR461LTR "histone,histone modification,broad histone mark" H3K9me3-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF578DJA https://www.encodeproject.org/files/ENCFF578DJA/@@download/ENCFF578DJA.bam ENCFF598IQB https://www.encodeproject.org/files/ENCFF598IQB/@@download/ENCFF598IQB.bam 32.3 M 0 31.8 M 0.986 SE 76 36 36 0.0 M 23.9 M 21.1 M 0.654 0.88 0.88 8.22 175 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2fc194f-affa-46bc-b0be-3e9e88f07656/@@download/cross_correlation_plot/ENCFF732HOM-ENCFF914WYW_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB224UVI bradley-bernstein:DNA_Lib 5981 "ENCFF732HOM,ENCFF914WYW" HiSeq 2500 2016-09-27T20:50:53.321163+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB13j0369FVjGXzV7KjzV6 ENCSR684BMS https://www.encodeproject.org/experiments/ENCSR684BMS "histone,histone modification,broad histone mark" H4K20me1-human MM.1S immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF928ZPF https://www.encodeproject.org/files/ENCFF928ZPF/@@download/ENCFF928ZPF.bam ENCFF544NZF https://www.encodeproject.org/files/ENCFF544NZF/@@download/ENCFF544NZF.bam 59.4 M 0 58.2 M 0.980 SE 36 36 36 0.0 M 43.9 M 42.9 M 0.723 0.98 0.98 45.55 175 1.01 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d01fecf-db64-4cf8-bf4a-29a794f9803a/@@download/cross_correlation_plot/ENCFF308WYU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB553XGY bradley-bernstein:DNA_Lib 5557 ENCFF308WYU HiSeq 2500 2016-09-27T20:51:39.518690+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB1gj0369FVjGXzV7KjzVX ENCSR684BMS https://www.encodeproject.org/experiments/ENCSR684BMS "histone,histone modification,broad histone mark" H4K20me1-human MM.1S immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF531PZO https://www.encodeproject.org/files/ENCFF531PZO/@@download/ENCFF531PZO.bam ENCFF262FNV https://www.encodeproject.org/files/ENCFF262FNV/@@download/ENCFF262FNV.bam 55.6 M 0 54.3 M 0.977 SE 76 36 36 0.0 M 41.6 M 31.9 M 0.574 0.77 0.76 3.89 185 1.02 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/546ddac1-249b-4575-b686-63056165ed4e/@@download/cross_correlation_plot/ENCFF312DRI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB384NWP bradley-bernstein:DNA_Lib 5983 ENCFF312DRI HiSeq 2500 2016-09-27T20:51:11.033816+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbB1q803698YYXPy97GY63b ENCSR000ANT https://www.encodeproject.org/experiments/ENCSR000ANT control Control-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF408COK https://www.encodeproject.org/files/ENCFF408COK/@@download/ENCFF408COK.bam ENCFF384SVU https://www.encodeproject.org/files/ENCFF384SVU/@@download/ENCFF384SVU.bam 56.0 M 0 49.1 M 0.877 SE 36 36 native 0.0 M 35.9 M 28.9 M 0.516 0.82 0.83 5.92 140 1.03 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/785e7425-fac1-4f75-b0dc-b772a0f60bde/@@download/cross_correlation_plot/ENCFF000BNR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADY ENCFF000BNR Illumina Genome Analyzer II 2016-08-09T15:59:12.863686+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYFy80369F97Byg82v2pp2 ENCSR000ANT https://www.encodeproject.org/experiments/ENCSR000ANT control Control-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF882RJG https://www.encodeproject.org/files/ENCFF882RJG/@@download/ENCFF882RJG.bam ENCFF742NGM https://www.encodeproject.org/files/ENCFF742NGM/@@download/ENCFF742NGM.bam 40.4 M 0 36.2 M 0.896 SE 36 36 native 0.0 M 27.0 M 20.7 M 0.513 0.79 0.80 4.97 125 1.05 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/d4e66fdf-d766-4e0f-afdd-4da2b9f30f15/@@download/cross_correlation_plot/ENCFF000BNO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADZ ENCFF000BNO Illumina Genome Analyzer IIx 2016-08-09T15:58:53.925807+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYG0Q036927gfXkG2b309X ENCSR000ANS https://www.encodeproject.org/experiments/ENCSR000ANS "transcription factor,RNA binding protein" CTCF-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF275OTT https://www.encodeproject.org/files/ENCFF275OTT/@@download/ENCFF275OTT.bam ENCFF923YMZ https://www.encodeproject.org/files/ENCFF923YMZ/@@download/ENCFF923YMZ.bam 20.1 M 0 14.0 M 0.695 SE 36 36 native 0.0 M 10.3 M 6.1 M 0.304 0.60 0.59 2.35 175 2.50 3.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/576d98b4-8534-446b-9fb4-e4c8e1341a42/@@download/cross_correlation_plot/ENCFF000BNS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAH ENCFF000BNS Illumina Genome Analyzer IIe 2016-12-11T04:55:06.044528+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166KfQ03697yz601ypVJ3xZ ENCSR000ANS https://www.encodeproject.org/experiments/ENCSR000ANS "transcription factor,RNA binding protein" CTCF-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF408DZP https://www.encodeproject.org/files/ENCFF408DZP/@@download/ENCFF408DZP.bam ENCFF967GZJ https://www.encodeproject.org/files/ENCFF967GZJ/@@download/ENCFF967GZJ.bam 26.7 M 0 20.8 M 0.779 SE 36 36 native 0.0 M 15.7 M 13.8 M 0.516 0.89 0.90 9.97 140 1.83 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/63aefbd3-131c-4e47-8591-10b562978b34/@@download/cross_correlation_plot/ENCFF000BNU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAG ENCFF000BNU Illumina Genome Analyzer IIx 2016-12-11T05:03:59.923809+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Kvj03697yz601ypVJ3xz ENCSR000ASZ https://www.encodeproject.org/experiments/ENCSR000ASZ "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF786DNP https://www.encodeproject.org/files/ENCFF786DNP/@@download/ENCFF786DNP.bam ENCFF242KKP https://www.encodeproject.org/files/ENCFF242KKP/@@download/ENCFF242KKP.bam 15.9 M 0 13.7 M 0.862 SE 36 36 native 0.0 M 10.8 M 3.1 M 0.196 0.31 0.27 1.60 350 1.17 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/f69c27ca-6192-493b-a317-f3619d7b4c79/@@download/cross_correlation_plot/ENCFF000BOB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABH bradley-bernstein:DNA_Lib 330 ENCFF000BOB HiSeq 2000 2016-12-11T04:21:05.465128+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165gK80369KbxV61z4GFvg8 ENCSR000ASZ https://www.encodeproject.org/experiments/ENCSR000ASZ "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF844TGJ https://www.encodeproject.org/files/ENCFF844TGJ/@@download/ENCFF844TGJ.bam ENCFF388HPO https://www.encodeproject.org/files/ENCFF388HPO/@@download/ENCFF388HPO.bam 49.2 M 0 47.0 M 0.956 SE 36 36 native 0.0 M 35.9 M 11.4 M 0.233 0.36 0.35 1.78 280 1.05 2.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1179690-6d82-4920-9060-d091b1d77e6b/@@download/cross_correlation_plot/ENCFF000BOE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHA bradley-bernstein:DNA_Lib 332 ENCFF000BOE HiSeq 2000 2016-12-11T04:46:07.596206+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165gXj0369F4yf5544b19PY ENCSR000ANU https://www.encodeproject.org/experiments/ENCSR000ANU "histone,histone modification,narrow histone mark" H2AFZ-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF566JZT https://www.encodeproject.org/files/ENCFF566JZT/@@download/ENCFF566JZT.bam ENCFF098RBO https://www.encodeproject.org/files/ENCFF098RBO/@@download/ENCFF098RBO.bam 24.4 M 0 20.6 M 0.843 SE 36 36 native 0.0 M 16.1 M 14.7 M 0.603 0.92 0.92 13.42 140 1.24 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/afb0d444-dd6e-475a-b8f3-52c16450394d/@@download/cross_correlation_plot/ENCFF000BOH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEZ ENCFF000BOH Illumina Genome Analyzer IIx 2016-11-07T03:09:33.165817+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK91j0369KGxqqJv3G8Fv2 ENCSR000ANU https://www.encodeproject.org/experiments/ENCSR000ANU "histone,histone modification,narrow histone mark" H2AFZ-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF773YGK https://www.encodeproject.org/files/ENCFF773YGK/@@download/ENCFF773YGK.bam ENCFF317GCR https://www.encodeproject.org/files/ENCFF317GCR/@@download/ENCFF317GCR.bam 20.9 M 0 16.9 M 0.811 SE 36 36 native 0.0 M 13.1 M 10.8 M 0.519 0.85 0.85 6.57 185 1.23 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/99fdfb9f-8c41-4cb5-be19-6b643e36c73d/@@download/cross_correlation_plot/ENCFF000BOG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEY ENCFF000BOG Illumina Genome Analyzer IIx 2016-11-07T03:09:47.047789+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK9BQ03691p5Qf186B55yK ENCSR000ANV https://www.encodeproject.org/experiments/ENCSR000ANV "histone,histone modification,narrow histone mark" H3K27ac-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF302FHM https://www.encodeproject.org/files/ENCFF302FHM/@@download/ENCFF302FHM.bam ENCFF901FAL https://www.encodeproject.org/files/ENCFF901FAL/@@download/ENCFF901FAL.bam 12.4 M 0 10.5 M 0.845 SE 36 36 native 0.0 M 8.6 M 7.8 M 0.626 0.91 0.91 11.41 200 1.57 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/c00125ec-2fb7-4ed9-a586-7b9bd3e18d09/@@download/cross_correlation_plot/ENCFF000BOT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEB ENCFF000BOT Illumina Genome Analyzer IIe 2016-08-09T15:58:11.787802+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY9xQ0369J0Bzfkv2XyxBK ENCSR000ANV https://www.encodeproject.org/experiments/ENCSR000ANV "histone,histone modification,narrow histone mark" H3K27ac-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF198UAJ https://www.encodeproject.org/files/ENCFF198UAJ/@@download/ENCFF198UAJ.bam ENCFF977SMZ https://www.encodeproject.org/files/ENCFF977SMZ/@@download/ENCFF977SMZ.bam 12.9 M 0 11.8 M 0.911 SE 36 36 native 0.0 M 9.9 M 6.0 M 0.461 0.62 0.61 2.52 215 1.63 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9c4b620-2a4c-4d69-b04c-b2528d2336dc/@@download/cross_correlation_plot/ENCFF000BOU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEC ENCFF000BOU Illumina Genome Analyzer IIx 2016-08-09T15:58:37.564812+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYB00036927gfXkG2b3080 ENCSR000ATI https://www.encodeproject.org/experiments/ENCSR000ATI "histone,histone modification,broad histone mark" H3K27me3-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF287IGX https://www.encodeproject.org/files/ENCFF287IGX/@@download/ENCFF287IGX.bam ENCFF311EJF https://www.encodeproject.org/files/ENCFF311EJF/@@download/ENCFF311EJF.bam 71.7 M 0 68.2 M 0.951 SE 36 36 native 0.0 M 53.6 M 46.0 M 0.641 0.87 0.86 7.27 195 1.02 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0b96ff8-b189-48c7-9ec6-bc7808eb91ee/@@download/cross_correlation_plot/ENCFF000BPC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATW bradley-bernstein:DNA_Lib 329 ENCFF000BPC Illumina Genome Analyzer IIe 2016-11-07T03:17:21.910015+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJqYj03695kGp5Vkb1Yg6J ENCSR000ATI https://www.encodeproject.org/experiments/ENCSR000ATI "histone,histone modification,broad histone mark" H3K27me3-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF864QHJ https://www.encodeproject.org/files/ENCFF864QHJ/@@download/ENCFF864QHJ.bam ENCFF499EAC https://www.encodeproject.org/files/ENCFF499EAC/@@download/ENCFF499EAC.bam 22.0 M 0 20.6 M 0.935 SE 36 36 native 0.0 M 16.3 M 14.5 M 0.657 0.89 0.89 8.87 210 1.02 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/80351017-fc3b-4a32-aa3a-d985876638f7/@@download/cross_correlation_plot/ENCFF000BPB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ATX bradley-bernstein:DNA_Lib 331 ENCFF000BPB HiSeq 2000 2016-11-07T03:15:33.354945+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJqqQ03696QVKGb5b18267 ENCSR000ANW https://www.encodeproject.org/experiments/ENCSR000ANW "histone,histone modification,broad histone mark" H3K36me3-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF474VYS https://www.encodeproject.org/files/ENCFF474VYS/@@download/ENCFF474VYS.bam ENCFF159RQF https://www.encodeproject.org/files/ENCFF159RQF/@@download/ENCFF159RQF.bam 18.7 M 0 14.0 M 0.746 SE 36 36 native 0.0 M 10.0 M 8.9 M 0.477 0.90 0.90 10.22 170 1.04 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/c85e142e-bd84-4cf5-bbd1-9a52feb784a2/@@download/cross_correlation_plot/ENCFF000BPD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFU ENCFF000BPD Illumina Genome Analyzer IIe 2016-11-07T03:12:13.182466+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK0zj0369B7X2vz98168QJ ENCSR000ANW https://www.encodeproject.org/experiments/ENCSR000ANW "histone,histone modification,broad histone mark" H3K36me3-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF576SHB https://www.encodeproject.org/files/ENCFF576SHB/@@download/ENCFF576SHB.bam ENCFF338MIX https://www.encodeproject.org/files/ENCFF338MIX/@@download/ENCFF338MIX.bam 22.8 M 0 19.0 M 0.835 SE 36 36 native 0.0 M 14.0 M 11.9 M 0.524 0.87 0.87 7.59 220 1.06 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/be9f80b6-c72f-4688-b775-b6c7546e5062/@@download/cross_correlation_plot/ENCFF000BPE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFT ENCFF000BPE Illumina Genome Analyzer IIx 2016-11-07T03:12:18.691896+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK1680369349Kqpx8PZbKx ENCSR000ANX https://www.encodeproject.org/experiments/ENCSR000ANX "histone,histone modification,broad histone mark" H3K4me1-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF186LKO https://www.encodeproject.org/files/ENCFF186LKO/@@download/ENCFF186LKO.bam ENCFF415LVF https://www.encodeproject.org/files/ENCFF415LVF/@@download/ENCFF415LVF.bam 18.0 M 0 10.6 M 0.587 SE 36 36 native 0.0 M 7.7 M 7.4 M 0.409 0.96 0.96 24.02 170 1.11 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/41d4336e-eef3-4e8a-997f-8b73dc507e2c/@@download/cross_correlation_plot/ENCFF000BPG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVQ ENCFF000BPG Illumina Genome Analyzer IIe 2016-11-07T03:12:38.900227+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJz7803696Zj590J8Yzbbb ENCSR000ANX https://www.encodeproject.org/experiments/ENCSR000ANX "histone,histone modification,broad histone mark" H3K4me1-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF166ECM https://www.encodeproject.org/files/ENCFF166ECM/@@download/ENCFF166ECM.bam ENCFF349UCO https://www.encodeproject.org/files/ENCFF349UCO/@@download/ENCFF349UCO.bam 21.8 M 0 17.7 M 0.813 SE 36 36 native 0.0 M 13.8 M 11.9 M 0.547 0.88 0.88 8.43 190 1.11 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcfc5ad6-b361-427e-b420-f2f36d8f96be/@@download/cross_correlation_plot/ENCFF000BPO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AED ENCFF000BPO Illumina Genome Analyzer IIx 2016-11-07T03:12:47.724363+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJzG8036941y6xk1837KK4 ENCSR000ANY https://www.encodeproject.org/experiments/ENCSR000ANY "histone,histone modification,narrow histone mark" H3K4me2-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF769PUA https://www.encodeproject.org/files/ENCFF769PUA/@@download/ENCFF769PUA.bam ENCFF952YTC https://www.encodeproject.org/files/ENCFF952YTC/@@download/ENCFF952YTC.bam 20.4 M 0 12.7 M 0.624 SE 36 36 native 0.0 M 9.3 M 8.9 M 0.436 0.95 0.95 21.29 185 1.22 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd749aaf-dbe6-456f-8676-21ab741c73f1/@@download/cross_correlation_plot/ENCFF000BPR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVO ENCFF000BPR Illumina Genome Analyzer IIe 2016-11-07T03:16:21.640445+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJg8Q03697GFbjV1b4gVgZ ENCSR000ANY https://www.encodeproject.org/experiments/ENCSR000ANY "histone,histone modification,narrow histone mark" H3K4me2-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF428BQL https://www.encodeproject.org/files/ENCFF428BQL/@@download/ENCFF428BQL.bam ENCFF065YEK https://www.encodeproject.org/files/ENCFF065YEK/@@download/ENCFF065YEK.bam 19.9 M 0 15.5 M 0.778 SE 36 36 native 0.0 M 12.4 M 10.7 M 0.541 0.88 0.89 8.72 195 1.34 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecfcebee-a1a1-45ca-9d9d-b9d991309e80/@@download/cross_correlation_plot/ENCFF000BPQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVP ENCFF000BPQ Illumina Genome Analyzer IIx 2016-11-07T03:16:27.597749+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJgK00369Fq9ppXVbB986b ENCSR000ANZ https://www.encodeproject.org/experiments/ENCSR000ANZ "histone,histone modification,narrow histone mark" H3K4me3-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF229ESP https://www.encodeproject.org/files/ENCFF229ESP/@@download/ENCFF229ESP.bam ENCFF987FPV https://www.encodeproject.org/files/ENCFF987FPV/@@download/ENCFF987FPV.bam 12.7 M 0 10.5 M 0.823 SE 36 36 native 0.0 M 7.8 M 7.3 M 0.572 0.94 0.94 17.01 190 1.14 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/483ee989-21aa-437e-a2c1-6f2050afd574/@@download/cross_correlation_plot/ENCFF000BPY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANL ENCFF000BPY Illumina Genome Analyzer IIe 2016-08-20T00:44:58.995270+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZPgj036946XvQb09Kgz56 ENCSR000ANZ https://www.encodeproject.org/experiments/ENCSR000ANZ "histone,histone modification,narrow histone mark" H3K4me3-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF404PVY https://www.encodeproject.org/files/ENCFF404PVY/@@download/ENCFF404PVY.bam ENCFF200QPE https://www.encodeproject.org/files/ENCFF200QPE/@@download/ENCFF200QPE.bam 21.2 M 0 16.8 M 0.792 SE 36 36 native 0.0 M 12.9 M 10.6 M 0.500 0.86 0.86 7.25 185 1.75 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/795fd451-473a-42f8-bc8e-fe49167bb23d/@@download/cross_correlation_plot/ENCFF000BPW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANM ENCFF000BPW Illumina Genome Analyzer IIx 2016-08-20T00:45:43.296297+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZPp00369JjVqXgZ9JkyYQ ENCSR000AON https://www.encodeproject.org/experiments/ENCSR000AON "histone,histone modification,broad histone mark" H3K79me2-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF070XWX https://www.encodeproject.org/files/ENCFF070XWX/@@download/ENCFF070XWX.bam ENCFF862ZOH https://www.encodeproject.org/files/ENCFF862ZOH/@@download/ENCFF862ZOH.bam 38.6 M 0 32.8 M 0.850 SE 36 36 native 0.0 M 25.3 M 22.9 M 0.594 0.92 0.92 12.12 120 1.07 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/277c081c-4f50-40a9-b436-d16a7474da66/@@download/cross_correlation_plot/ENCFF000BQH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARG ENCFF000BQH Illumina Genome Analyzer IIx 2016-11-07T03:12:49.042972+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK1y00369B7X2vz98168V4 ENCSR000AON https://www.encodeproject.org/experiments/ENCSR000AON "histone,histone modification,broad histone mark" H3K79me2-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF100KJA https://www.encodeproject.org/files/ENCFF100KJA/@@download/ENCFF100KJA.bam ENCFF599EEP https://www.encodeproject.org/files/ENCFF599EEP/@@download/ENCFF599EEP.bam 26.8 M 0 23.0 M 0.859 SE 36 36 native 0.0 M 17.3 M 16.1 M 0.602 0.94 0.94 17.64 110 1.10 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6ad2b8b-2b64-463e-bc56-f01dbe8c267d/@@download/cross_correlation_plot/ENCFF000BQG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ARF ENCFF000BQG Illumina Genome Analyzer IIx 2016-11-07T03:12:08.599333+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK24Q03696gP4JvV866Qf4 ENCSR000AOY https://www.encodeproject.org/experiments/ENCSR000AOY "histone,histone modification,narrow histone mark" H3K9ac-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF938UET https://www.encodeproject.org/files/ENCFF938UET/@@download/ENCFF938UET.bam ENCFF134NLN https://www.encodeproject.org/files/ENCFF134NLN/@@download/ENCFF134NLN.bam 18.3 M 0 12.3 M 0.670 SE 36 36 native 0.0 M 9.2 M 7.3 M 0.399 0.80 0.81 5.17 235 1.42 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/8dbfc0a2-78b0-4921-9a85-f0cfd2848792/@@download/cross_correlation_plot/ENCFF000BQF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVA ENCFF000BQF Illumina Genome Analyzer IIe 2016-11-07T03:11:38.312411+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK2g80369349Kqpx8PZbQ6 ENCSR000AOY https://www.encodeproject.org/experiments/ENCSR000AOY "histone,histone modification,narrow histone mark" H3K9ac-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF235TJC https://www.encodeproject.org/files/ENCFF235TJC/@@download/ENCFF235TJC.bam ENCFF367CBY https://www.encodeproject.org/files/ENCFF367CBY/@@download/ENCFF367CBY.bam 25.7 M 0 20.5 M 0.799 SE 36 36 native 0.0 M 16.2 M 13.5 M 0.523 0.85 0.85 6.94 180 1.34 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e6f28e5-71e6-4753-8908-474e5a4f962a/@@download/cross_correlation_plot/ENCFF000BQL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVB ENCFF000BQL Illumina Genome Analyzer IIx 2016-11-07T03:11:54.462023+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK2x0036941y6xk1837KQ6 ENCSR000AQM https://www.encodeproject.org/experiments/ENCSR000AQM "histone,histone modification,broad histone mark" H3K9me3-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF120VHV https://www.encodeproject.org/files/ENCFF120VHV/@@download/ENCFF120VHV.bam ENCFF683PZS https://www.encodeproject.org/files/ENCFF683PZS/@@download/ENCFF683PZS.bam 43.1 M 0 41.8 M 0.968 SE 36 36 native 0.0 M 27.9 M 26.7 M 0.619 0.96 0.96 26.58 145 1.03 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/51f16434-e499-4930-9674-6ad53d3dc08f/@@download/cross_correlation_plot/ENCFF000BON.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUW ENCFF000BON Illumina Genome Analyzer IIx 2016-11-07T03:13:17.229203+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK1J0036945FQkxk8GJXYV ENCSR000AQM https://www.encodeproject.org/experiments/ENCSR000AQM "histone,histone modification,broad histone mark" H3K9me3-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF199EYB https://www.encodeproject.org/files/ENCFF199EYB/@@download/ENCFF199EYB.bam ENCFF955SRK https://www.encodeproject.org/files/ENCFF955SRK/@@download/ENCFF955SRK.bam 21.7 M 0 19.6 M 0.903 SE 36 36 native 0.0 M 12.7 M 12.0 M 0.554 0.95 0.95 18.95 110 1.04 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a413ba4-6f68-46ce-9787-272fad3dd1bc/@@download/cross_correlation_plot/ENCFF000BOM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AUX ENCFF000BOM Illumina Genome Analyzer IIx 2016-11-07T03:12:17.296752+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK1X803696kxzJj982F2vG ENCSR000AOZ https://www.encodeproject.org/experiments/ENCSR000AOZ "histone,histone modification,broad histone mark" H4K20me1-human myotube in vitro differentiated cells 1 bradley-bernstein ENCODE2 GRCh38 ENCFF279XRR https://www.encodeproject.org/files/ENCFF279XRR/@@download/ENCFF279XRR.bam ENCFF095QIS https://www.encodeproject.org/files/ENCFF095QIS/@@download/ENCFF095QIS.bam 27.7 M 0 20.8 M 0.750 SE 36 36 native 0.0 M 15.5 M 6.0 M 0.217 0.44 0.45 1.98 200 1.06 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/38cf22ca-483d-473a-8a67-50fbada0c112/@@download/cross_correlation_plot/ENCFF000BQO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANQ ENCFF000BQO Illumina Genome Analyzer IIx 2016-11-07T03:10:11.311466+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK8V00369B8pxyPG3K2Jqj ENCSR000AOZ https://www.encodeproject.org/experiments/ENCSR000AOZ "histone,histone modification,broad histone mark" H4K20me1-human myotube in vitro differentiated cells 2 bradley-bernstein ENCODE2 GRCh38 ENCFF682BDI https://www.encodeproject.org/files/ENCFF682BDI/@@download/ENCFF682BDI.bam ENCFF405KIZ https://www.encodeproject.org/files/ENCFF405KIZ/@@download/ENCFF405KIZ.bam 27.8 M 0 16.7 M 0.602 SE 36 36 native 0.0 M 11.9 M 10.8 M 0.389 0.93 0.93 14.66 160 1.06 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/82aba56b-63a6-4c8a-874b-37808a455e33/@@download/cross_correlation_plot/ENCFF000BQN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ANR ENCFF000BQN Illumina Genome Analyzer IIx 2016-11-07T03:10:04.362519+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK8j80369KGxqqJv3G8Fqg ENCSR409FGC https://www.encodeproject.org/experiments/ENCSR409FGC control Control-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF785AAA https://www.encodeproject.org/files/ENCFF785AAA/@@download/ENCFF785AAA.bam ENCFF302QUP https://www.encodeproject.org/files/ENCFF302QUP/@@download/ENCFF302QUP.bam 50.7 M 0 49.0 M 0.968 SE 76 76 native 0.0 M 42.8 M 39.6 M 0.781 0.93 0.93 14.12 215 1.01 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ed45e01-033a-4323-a5cd-bb550a8d40e2/@@download/cross_correlation_plot/ENCFF837SVG-ENCFF279GKI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB014IRB bradley-bernstein:DNA_Lib 7019 "ENCFF279GKI,ENCFF837SVG" HiSeq 2500 2017-01-06T16:09:57.917804+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gGGk00369Kbx0VG4x741K3 ENCSR409FGC https://www.encodeproject.org/experiments/ENCSR409FGC control Control-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF960WRQ https://www.encodeproject.org/files/ENCFF960WRQ/@@download/ENCFF960WRQ.bam ENCFF465IHE https://www.encodeproject.org/files/ENCFF465IHE/@@download/ENCFF465IHE.bam 101.3 M 0 98.7 M 0.974 PE 76 76 native 41.3 M 0.0 M 37.9 M 0.749 0.92 0.92 11.92 200 1.05 10.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8666633-be56-4391-85e8-3e5d71758e56/@@download/cross_correlation_plot/ENCFF837SVG-ENCFF279GKI_pooledENCFF327EQZ-ENCFF413GTS_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB014IRB bradley-bernstein:DNA_Lib 7019 "ENCFF279GKI,ENCFF837SVG,ENCFF413GTS,ENCFF327EQZ" HiSeq 2500 2016-10-12T18:55:26.702739+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygGv80369BZb2FyGKFk7gq ENCSR409FGC https://www.encodeproject.org/experiments/ENCSR409FGC control Control-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF599VTL https://www.encodeproject.org/files/ENCFF599VTL/@@download/ENCFF599VTL.bam ENCFF190IKF https://www.encodeproject.org/files/ENCFF190IKF/@@download/ENCFF190IKF.bam 98.7 M 0 95.0 M 0.963 SE 76 76 native 0.0 M 81.8 M 76.1 M 0.772 0.94 0.94 16.50 185 1.01 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/e01575c8-e991-463b-b263-5354f8ec59c0/@@download/cross_correlation_plot/ENCFF356KJM-ENCFF557IJC-ENCFF765UYP_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB001MNW bradley-bernstein:DNA_Lib 6169 "ENCFF765UYP,ENCFF356KJM,ENCFF557IJC" HiSeq 2500 2017-01-06T16:12:46.686372+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gGGy8036989V5XGf2xQzVx ENCSR409FGC https://www.encodeproject.org/experiments/ENCSR409FGC control Control-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF446RUP https://www.encodeproject.org/files/ENCFF446RUP/@@download/ENCFF446RUP.bam ENCFF057NZJ https://www.encodeproject.org/files/ENCFF057NZJ/@@download/ENCFF057NZJ.bam 197.4 M 0 187.8 M 0.951 PE 76 76 native 76.1 M 0.0 M 71.0 M 0.719 0.93 0.93 14.62 175 1.03 14.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/62f26e14-4f88-49d1-bf22-a21d2f84f322/@@download/cross_correlation_plot/ENCFF356KJM-ENCFF557IJC-ENCFF765UYP_pooledENCFF758JBV-ENCFF698BKU-ENCFF808PAO_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB001MNW bradley-bernstein:DNA_Lib 6169 "ENCFF758JBV,ENCFF765UYP,ENCFF356KJM,ENCFF557IJC,ENCFF698BKU,ENCFF808PAO" HiSeq 2500 2016-10-12T19:03:46.415967+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygJ080369FqJXFpZKB9PgJ ENCSR559IFS https://www.encodeproject.org/experiments/ENCSR559IFS "histone,histone modification,narrow histone mark" H2AFZ-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF906FZZ https://www.encodeproject.org/files/ENCFF906FZZ/@@download/ENCFF906FZZ.bam ENCFF981YXP https://www.encodeproject.org/files/ENCFF981YXP/@@download/ENCFF981YXP.bam 58.1 M 0 54.0 M 0.930 PE 76 76 native 21.3 M 0.0 M 18.1 M 0.623 0.85 0.85 6.40 170 1.10 8.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/504ba3c9-4b29-4817-8429-541f28ef7d71/@@download/cross_correlation_plot/ENCFF012JFBENCFF617UKO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB672RPF bradley-bernstein:DNA_Lib 6174 "ENCFF012JFB,ENCFF617UKO" HiSeq 2500 2016-10-12T17:03:24.012664+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzyf0000369333ZQZZz6fJgP ENCSR559IFS https://www.encodeproject.org/experiments/ENCSR559IFS "histone,histone modification,narrow histone mark" H2AFZ-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF120PFK https://www.encodeproject.org/files/ENCFF120PFK/@@download/ENCFF120PFK.bam ENCFF184CHK https://www.encodeproject.org/files/ENCFF184CHK/@@download/ENCFF184CHK.bam 70.8 M 0 69.3 M 0.979 PE 76 76 native 29.7 M 0.0 M 28.7 M 0.813 0.97 0.97 29.46 210 1.06 4.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5c1a811-8715-427c-9504-609696ee5b19/@@download/cross_correlation_plot/ENCFF922JKPENCFF481MOE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB404EIB bradley-bernstein:DNA_Lib 6825 "ENCFF922JKP,ENCFF481MOE" HiSeq 2500 2016-10-12T17:03:24.438034+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzyf0k003691z240yJVbkYG3 ENCSR536SZD https://www.encodeproject.org/experiments/ENCSR536SZD "histone,histone modification,broad histone mark" H3F3A-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF361TJX https://www.encodeproject.org/files/ENCFF361TJX/@@download/ENCFF361TJX.bam ENCFF842WJJ https://www.encodeproject.org/files/ENCFF842WJJ/@@download/ENCFF842WJJ.bam 47.3 M 0 46.0 M 0.973 SE 76 76 native 0.0 M 40.5 M 35.5 M 0.751 0.88 0.88 7.91 220 1.01 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/86c41b10-a65d-413f-99d5-c27a4535d24c/@@download/cross_correlation_plot/ENCFF165VDB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB722QLS bradley-bernstein:DNA_Lib 6976 ENCFF165VDB HiSeq 2500 2016-12-15T10:41:39.424767+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F193J1Q0369G6gZ06G9Q53b3 ENCSR536SZD https://www.encodeproject.org/experiments/ENCSR536SZD "histone,histone modification,broad histone mark" H3F3A-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF974MTE https://www.encodeproject.org/files/ENCFF974MTE/@@download/ENCFF974MTE.bam ENCFF107JDE https://www.encodeproject.org/files/ENCFF107JDE/@@download/ENCFF107JDE.bam 35.6 M 0 34.4 M 0.968 SE 76 76 native 0.0 M 30.0 M 27.8 M 0.780 0.94 0.94 16.13 170 1.01 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/60820f68-68bd-443d-a57a-a2037622f5fc/@@download/cross_correlation_plot/ENCFF482LPU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB399SBG bradley-bernstein:DNA_Lib 6181 ENCFF482LPU HiSeq 2500 2017-01-05T00:21:25.828444+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F193J6Q0369FgbG364kz8Z48 ENCSR562JTY https://www.encodeproject.org/experiments/ENCSR562JTY "histone,histone modification,broad histone mark" H3K36me3-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF806WFN https://www.encodeproject.org/files/ENCFF806WFN/@@download/ENCFF806WFN.bam ENCFF659IWG https://www.encodeproject.org/files/ENCFF659IWG/@@download/ENCFF659IWG.bam 75.2 M 0 73.1 M 0.973 PE 76 76 native 30.4 M 0.0 M 29.3 M 0.781 0.96 0.96 28.25 210 1.05 12.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/e24a1a15-8479-49fa-b2a3-d472bf0c0944/@@download/cross_correlation_plot/ENCFF931LYYENCFF998ZKX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB727HCL bradley-bernstein:DNA_Lib 6822 "ENCFF931LYY,ENCFF998ZKX" HiSeq 2500 2016-10-12T18:52:42.039370+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygFxj03691G5B5kQKJ2jgF ENCSR562JTY https://www.encodeproject.org/experiments/ENCSR562JTY "histone,histone modification,broad histone mark" H3K36me3-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF507PBY https://www.encodeproject.org/files/ENCFF507PBY/@@download/ENCFF507PBY.bam ENCFF994WCM https://www.encodeproject.org/files/ENCFF994WCM/@@download/ENCFF994WCM.bam 63.6 M 0 58.4 M 0.919 PE 76 76 native 22.7 M 0.0 M 21.8 M 0.686 0.96 0.96 26.44 160 1.07 9.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/a28a8f83-961f-40cf-8ad3-06747b6c6f9c/@@download/cross_correlation_plot/ENCFF010ZMNENCFF959GLM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB427UUV bradley-bernstein:DNA_Lib 6184 "ENCFF010ZMN,ENCFF959GLM" HiSeq 2500 2016-10-12T18:51:52.923862+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygG280369BZ5YzKkPGfyQ9 ENCSR011CSR https://www.encodeproject.org/experiments/ENCSR011CSR "histone,histone modification,broad histone mark" H3K4me1-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF198NVO https://www.encodeproject.org/files/ENCFF198NVO/@@download/ENCFF198NVO.bam ENCFF973NBC https://www.encodeproject.org/files/ENCFF973NBC/@@download/ENCFF973NBC.bam 67.6 M 0 66.1 M 0.978 PE 76 76 native 28.8 M 0.0 M 24.6 M 0.729 0.86 0.85 6.60 210 1.07 3.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/b73fe479-7aa6-4ba7-a39d-db19640d9d31/@@download/cross_correlation_plot/ENCFF246JENENCFF883WNC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB575BDT bradley-bernstein:DNA_Lib 6817 "ENCFF883WNC,ENCFF246JEN" HiSeq 2500 2016-10-12T18:37:52.412220+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygFX00369FJg3B493f9gxv ENCSR011CSR https://www.encodeproject.org/experiments/ENCSR011CSR "histone,histone modification,broad histone mark" H3K4me1-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF158OFL https://www.encodeproject.org/files/ENCFF158OFL/@@download/ENCFF158OFL.bam ENCFF799KZO https://www.encodeproject.org/files/ENCFF799KZO/@@download/ENCFF799KZO.bam 37.4 M 0 35.5 M 0.950 PE 76 76 native 14.6 M 0.0 M 14.3 M 0.765 0.98 0.98 42.50 175 1.12 5.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe0cc497-8baa-45c2-8cd3-4c98d6046ee8/@@download/cross_correlation_plot/ENCFF361SAKENCFF157LGP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB460RPX bradley-bernstein:DNA_Lib 6178 "ENCFF157LGP,ENCFF361SAK" HiSeq 2500 2016-10-12T18:37:46.826155+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygFgj03691G5B5kQKJ2jfX ENCSR692HIO https://www.encodeproject.org/experiments/ENCSR692HIO "histone,histone modification,narrow histone mark" H3K4me2-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF358IWV https://www.encodeproject.org/files/ENCFF358IWV/@@download/ENCFF358IWV.bam ENCFF131RWS https://www.encodeproject.org/files/ENCFF131RWS/@@download/ENCFF131RWS.bam 60.7 M 0 59.0 M 0.971 PE 76 76 native 25.5 M 0.0 M 23.9 M 0.786 0.94 0.94 15.42 220 1.11 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/24afa030-866b-48d6-935d-6b6f81ee82a8/@@download/cross_correlation_plot/ENCFF174VVNENCFF080GGG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB543XRW bradley-bernstein:DNA_Lib 6818 "ENCFF174VVN,ENCFF080GGG" HiSeq 2500 2016-10-12T18:52:23.340827+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygG0Q03697PXxP0vKgf6Xq ENCSR692HIO https://www.encodeproject.org/experiments/ENCSR692HIO "histone,histone modification,narrow histone mark" H3K4me2-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF429XFA https://www.encodeproject.org/files/ENCFF429XFA/@@download/ENCFF429XFA.bam ENCFF812NED https://www.encodeproject.org/files/ENCFF812NED/@@download/ENCFF812NED.bam 65.9 M 0 62.3 M 0.944 PE 76 76 native 25.7 M 0.0 M 24.8 M 0.751 0.97 0.97 29.04 170 1.13 2.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/5fcfd930-2e9b-4832-a58b-337c788daf7f/@@download/cross_correlation_plot/ENCFF781VVAENCFF889RRN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB752YQL bradley-bernstein:DNA_Lib 6180 "ENCFF889RRN,ENCFF781VVA" HiSeq 2500 2016-10-12T18:53:28.494079+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygG9j0369K6gKvBb3zQk27 ENCSR082NQB https://www.encodeproject.org/experiments/ENCSR082NQB "histone,histone modification,narrow histone mark" H3K4me3-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF417RNS https://www.encodeproject.org/files/ENCFF417RNS/@@download/ENCFF417RNS.bam ENCFF782FQP https://www.encodeproject.org/files/ENCFF782FQP/@@download/ENCFF782FQP.bam 68.1 M 0 66.3 M 0.974 PE 76 76 native 28.1 M 0.0 M 25.7 M 0.755 0.91 0.91 11.49 230 1.08 3.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/646c3866-e80d-46a3-b8ad-9e405d11e089/@@download/cross_correlation_plot/ENCFF614PIKENCFF805ITK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB943KMV bradley-bernstein:DNA_Lib 6819 "ENCFF614PIK,ENCFF805ITK" HiSeq 2500 2016-10-12T17:03:54.382189+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzybyfQ036911jZ3p9VVKVZQ ENCSR082NQB https://www.encodeproject.org/experiments/ENCSR082NQB "histone,histone modification,narrow histone mark" H3K4me3-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF067LLV https://www.encodeproject.org/files/ENCFF067LLV/@@download/ENCFF067LLV.bam ENCFF359RZT https://www.encodeproject.org/files/ENCFF359RZT/@@download/ENCFF359RZT.bam 50.5 M 0 47.5 M 0.940 PE 76 76 native 19.0 M 0.0 M 18.5 M 0.733 0.97 0.97 35.84 165 1.22 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2a423e7-914e-4360-bea1-71e90e885f59/@@download/cross_correlation_plot/ENCFF579RDEENCFF725UIG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB665NED bradley-bernstein:DNA_Lib 6183 "ENCFF579RDE,ENCFF725UIG" HiSeq 2500 2016-10-12T18:50:11.069684+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygGf803690Gj8J813yjkg6 ENCSR339FOO https://www.encodeproject.org/experiments/ENCSR339FOO "histone,histone modification,broad histone mark" H3K79me2-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF585OGC https://www.encodeproject.org/files/ENCFF585OGC/@@download/ENCFF585OGC.bam ENCFF345QWX https://www.encodeproject.org/files/ENCFF345QWX/@@download/ENCFF345QWX.bam 96.2 M 0 91.8 M 0.955 SE 76 76 native 0.0 M 81.5 M 74.8 M 0.778 0.92 0.93 13.46 195 1.01 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5380b7f-2079-4bca-ac89-2c65976b272e/@@download/cross_correlation_plot/ENCFF707QYV-ENCFF768KBW-ENCFF254AWQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB393FKH bradley-bernstein:DNA_Lib 6171 "ENCFF768KBW,ENCFF707QYV,ENCFF254AWQ" HiSeq 2500 2017-01-05T00:25:15.666411+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F193FyQ03693Bb8J2B4yyJJ9 ENCSR339FOO https://www.encodeproject.org/experiments/ENCSR339FOO "histone,histone modification,broad histone mark" H3K79me2-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF154DYV https://www.encodeproject.org/files/ENCFF154DYV/@@download/ENCFF154DYV.bam ENCFF319TEG https://www.encodeproject.org/files/ENCFF319TEG/@@download/ENCFF319TEG.bam 96.7 M 0 92.9 M 0.961 SE 76 76 native 0.0 M 81.6 M 75.4 M 0.779 0.92 0.93 13.26 195 1.01 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/532736a9-2cd3-4f76-b512-51056d9dc7bf/@@download/cross_correlation_plot/ENCFF128CYD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB676ONV bradley-bernstein:DNA_Lib 6977 ENCFF128CYD HiSeq 2500 2016-11-05T17:43:15.518300+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Kjb4003696QVKGb5b17zpf ENCSR327OGS https://www.encodeproject.org/experiments/ENCSR327OGS "histone,histone modification,narrow histone mark" H3K9ac-human NCI-H929 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF458ASM https://www.encodeproject.org/files/ENCFF458ASM/@@download/ENCFF458ASM.bam ENCFF168EFU https://www.encodeproject.org/files/ENCFF168EFU/@@download/ENCFF168EFU.bam 24.5 M 0 23.8 M 0.972 SE 76 76 native 0.0 M 21.0 M 19.8 M 0.811 0.95 0.95 21.56 210 1.07 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2df4513-90ca-4542-a66f-0e61c3cf95f7/@@download/cross_correlation_plot/ENCFF383WZV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB747QLN bradley-bernstein:DNA_Lib 6177 ENCFF383WZV HiSeq 2500 2016-11-26T04:40:04.872128+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vKbGQ03696bpJ9xxQvVfpY ENCSR327OGS https://www.encodeproject.org/experiments/ENCSR327OGS "histone,histone modification,narrow histone mark" H3K9ac-human NCI-H929 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF919IDN https://www.encodeproject.org/files/ENCFF919IDN/@@download/ENCFF919IDN.bam ENCFF944GPW https://www.encodeproject.org/files/ENCFF944GPW/@@download/ENCFF944GPW.bam 38.3 M 0 37.3 M 0.975 SE 76 76 native 0.0 M 33.5 M 30.5 M 0.797 0.91 0.91 12.07 220 1.15 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/77a9812d-deec-4bf6-a458-25b5d7707e8e/@@download/cross_correlation_plot/ENCFF519VCT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB786JDG bradley-bernstein:DNA_Lib 7018 ENCFF519VCT HiSeq 2500 2016-11-26T04:40:09.674511+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0vKZx803699j10QBk368zGG ENCSR308JFE https://www.encodeproject.org/experiments/ENCSR308JFE control Control-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF814QLD https://www.encodeproject.org/files/ENCFF814QLD/@@download/ENCFF814QLD.bam ENCFF597JWO https://www.encodeproject.org/files/ENCFF597JWO/@@download/ENCFF597JWO.bam 114.3 M 0 111.6 M 0.976 SE 36 36 native 0.0 M 85.0 M 77.7 M 0.680 0.92 0.92 12.71 195 1.01 0.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2e72358-2702-4c2a-9ca9-5bfb0254ffac/@@download/cross_correlation_plot/ENCFF949QOX-ENCFF900DXM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB394XFU,ENCLB887QUG" "bradley-bernstein:DNA_Lib 2191,bradley-bernstein:DNA_Lib 5074" "ENCFF949QOX,ENCFF900DXM" "HiSeq 2000,HiSeq 2500" 2016-11-02T17:18:48.154469+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GfK6Q03697K75bFk9xJXQz ENCSR308JFE https://www.encodeproject.org/experiments/ENCSR308JFE control Control-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF282HXJ https://www.encodeproject.org/files/ENCFF282HXJ/@@download/ENCFF282HXJ.bam ENCFF153BDJ https://www.encodeproject.org/files/ENCFF153BDJ/@@download/ENCFF153BDJ.bam 186.5 M 0 182.7 M 0.980 SE "76,36" 36 36 0.0 M 142.3 M 92.0 M 0.494 0.65 0.68 3.63 190 1.01 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a41c834-169c-454f-9076-a5b3f530211b/@@download/cross_correlation_plot/ENCFF746RWX-ENCFF472ADY-ENCFF895MOG-ENCFF286QYQ-ENCFF688OXR-ENCFF686JJA_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB367QBQ,ENCLB181VYC" "bradley-bernstein:DNA_Lib 8142,bradley-bernstein:DNA_Lib 5073" "ENCFF286QYQ,ENCFF686JJA,ENCFF472ADY,ENCFF688OXR,ENCFF746RWX,ENCFF895MOG" HiSeq 2500 2017-06-28T23:52:12.959890+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F59xJPj0369J3Q79B6Q3YZXF ENCSR816JBG https://www.encodeproject.org/experiments/ENCSR816JBG "histone,histone modification,narrow histone mark" H2AFZ-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF710IHD https://www.encodeproject.org/files/ENCFF710IHD/@@download/ENCFF710IHD.bam ENCFF251EIO https://www.encodeproject.org/files/ENCFF251EIO/@@download/ENCFF251EIO.bam 38.2 M 0 37.0 M 0.966 SE 36 36 native 0.0 M 30.3 M 16.4 M 0.428 0.55 0.54 2.13 205 1.04 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/139964a5-68c7-459d-bfb6-e00bdf3fed44/@@download/cross_correlation_plot/ENCFF002AZE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB573OFB bradley-bernstein:DNA_Lib 5142 ENCFF002AZE HiSeq 2500 2016-10-19T05:10:36.966898+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039vYQ03695qv6vpjjkFzY5 ENCSR816JBG https://www.encodeproject.org/experiments/ENCSR816JBG "histone,histone modification,narrow histone mark" H2AFZ-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF839DXI https://www.encodeproject.org/files/ENCFF839DXI/@@download/ENCFF839DXI.bam ENCFF738KQY https://www.encodeproject.org/files/ENCFF738KQY/@@download/ENCFF738KQY.bam 42.9 M 0 41.6 M 0.971 SE 36 36 native 0.0 M 31.2 M 30.9 M 0.722 0.99 0.99 140.64 185 1.01 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c49b6dd-ad62-4d05-ab73-37c6f525ed6f/@@download/cross_correlation_plot/ENCFF002AZX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB146WFQ bradley-bernstein:DNA_Lib 2134 ENCFF002AZX HiSeq 2000 2016-10-19T05:12:16.174526+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039vfj03695gxV9k8jjkpxf ENCSR873EIA https://www.encodeproject.org/experiments/ENCSR873EIA "histone,histone modification,broad histone mark" H3F3A-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF387XJV https://www.encodeproject.org/files/ENCFF387XJV/@@download/ENCFF387XJV.bam ENCFF055GLE https://www.encodeproject.org/files/ENCFF055GLE/@@download/ENCFF055GLE.bam 53.9 M 0 51.7 M 0.960 SE 36 36 36 0.0 M 42.3 M 20.9 M 0.387 0.50 0.48 1.84 205 1.03 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/e15985f0-f71e-47be-9eca-1478bbae798c/@@download/cross_correlation_plot/ENCFF682HVT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB829OKS bradley-bernstein:DNA_Lib 5147 ENCFF682HVT HiSeq 2500 2016-10-25T05:01:33.121007+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07B1pj0369F5BJQYVy18J9z ENCSR873EIA https://www.encodeproject.org/experiments/ENCSR873EIA "histone,histone modification,broad histone mark" H3F3A-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF203BVZ https://www.encodeproject.org/files/ENCFF203BVZ/@@download/ENCFF203BVZ.bam ENCFF175LWL https://www.encodeproject.org/files/ENCFF175LWL/@@download/ENCFF175LWL.bam 26.8 M 0 26.2 M 0.976 SE 76 36 36 0.0 M 20.3 M 15.1 M 0.564 0.75 0.73 3.54 170 1.02 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd86268d-dc15-4eae-86f9-3bd8ad19820a/@@download/cross_correlation_plot/ENCFF682IVF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB157SXI bradley-bernstein:DNA_Lib 5631 ENCFF682IVF HiSeq 2500 2016-10-25T05:01:21.291376+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07B1yQ0369KYp8Kq8FK6xX1 ENCSR124VOE https://www.encodeproject.org/experiments/ENCSR124VOE "histone,histone modification,narrow histone mark" H3K27ac-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF945CWL https://www.encodeproject.org/files/ENCFF945CWL/@@download/ENCFF945CWL.bam ENCFF547UAY https://www.encodeproject.org/files/ENCFF547UAY/@@download/ENCFF547UAY.bam 46.0 M 0 45.1 M 0.979 SE 36 36 native 0.0 M 38.2 M 25.3 M 0.549 0.67 0.66 2.86 215 1.27 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/762ecba8-abca-487a-b119-623380f022d0/@@download/cross_correlation_plot/ENCFF002AZH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB520XPR bradley-bernstein:DNA_Lib 5107 ENCFF002AZH HiSeq 2500 2016-10-19T05:12:12.377717+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039vk00369K4v15xZjVGB2P ENCSR124VOE https://www.encodeproject.org/experiments/ENCSR124VOE "histone,histone modification,narrow histone mark" H3K27ac-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF424SDM https://www.encodeproject.org/files/ENCFF424SDM/@@download/ENCFF424SDM.bam ENCFF846BMZ https://www.encodeproject.org/files/ENCFF846BMZ/@@download/ENCFF846BMZ.bam 41.6 M 0 40.2 M 0.966 SE 36 36 native 0.0 M 31.0 M 30.5 M 0.732 0.99 0.99 74.90 195 1.08 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b31cc49-ea61-4dda-addb-94e36a5c4378/@@download/cross_correlation_plot/ENCFF002AZW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB269HZI bradley-bernstein:DNA_Lib 2135 ENCFF002AZW HiSeq 2000 2016-10-19T05:12:36.058926+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039vvQ03695gxV9k8jjkpxz ENCSR654VRX https://www.encodeproject.org/experiments/ENCSR654VRX "histone,histone modification,broad histone mark" H3K27me3-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF650DYO https://www.encodeproject.org/files/ENCFF650DYO/@@download/ENCFF650DYO.bam ENCFF487IOC https://www.encodeproject.org/files/ENCFF487IOC/@@download/ENCFF487IOC.bam 63.2 M 0 62.0 M 0.980 SE 36 36 native 0.0 M 49.5 M 35.1 M 0.555 0.72 0.71 3.27 200 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/964cc07a-9124-44ca-a386-40899bda272d/@@download/cross_correlation_plot/ENCFF002AUY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB854PPS bradley-bernstein:DNA_Lib 5106 ENCFF002AUY HiSeq 2500 2016-10-19T05:16:34.335371+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039yK003693813VZJB15yfJ ENCSR654VRX https://www.encodeproject.org/experiments/ENCSR654VRX "histone,histone modification,broad histone mark" H3K27me3-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF288TWC https://www.encodeproject.org/files/ENCFF288TWC/@@download/ENCFF288TWC.bam ENCFF624PQG https://www.encodeproject.org/files/ENCFF624PQG/@@download/ENCFF624PQG.bam 39.9 M 0 36.0 M 0.902 SE 36 36 native 0.0 M 27.1 M 26.5 M 0.666 0.98 0.98 52.46 190 1.01 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a05b5eb-2b62-45c8-a18f-1553e36e53a1/@@download/cross_correlation_plot/ENCFF002BBD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB185EKP bradley-bernstein:DNA_Lib 2136 ENCFF002BBD HiSeq 2000 2016-10-19T05:17:48.439361+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039yjQ03695FyfXK13ZvKkF ENCSR714KGG https://www.encodeproject.org/experiments/ENCSR714KGG "histone,histone modification,broad histone mark" H3K36me3-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF191KCZ https://www.encodeproject.org/files/ENCFF191KCZ/@@download/ENCFF191KCZ.bam ENCFF190OFN https://www.encodeproject.org/files/ENCFF190OFN/@@download/ENCFF190OFN.bam 42.7 M 0 40.1 M 0.940 SE 36 36 native 0.0 M 28.7 M 28.2 M 0.662 0.99 0.99 79.50 240 1.01 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/189c6b25-f321-44b7-a6bc-18d0bca08aa1/@@download/cross_correlation_plot/ENCFF002AWW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB099SCI bradley-bernstein:DNA_Lib 2345 ENCFF002AWW HiSeq 2000 2016-10-19T05:14:58.449234+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039xyj03690BBF6Px3bBK7p ENCSR714KGG https://www.encodeproject.org/experiments/ENCSR714KGG "histone,histone modification,broad histone mark" H3K36me3-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF167PTR https://www.encodeproject.org/files/ENCFF167PTR/@@download/ENCFF167PTR.bam ENCFF171GZY https://www.encodeproject.org/files/ENCFF171GZY/@@download/ENCFF171GZY.bam 51.1 M 0 46.0 M 0.900 SE 36 36 native 0.0 M 36.2 M 24.9 M 0.487 0.70 0.68 2.93 190 1.03 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/813e4b4f-a030-41fe-b5cc-fc8706e96890/@@download/cross_correlation_plot/ENCFF002AZB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB760LUD bradley-bernstein:DNA_Lib 5138 ENCFF002AZB HiSeq 2500 2016-10-19T05:15:36.614644+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039yK003698bjk4QbB5zZVb ENCSR329NAJ https://www.encodeproject.org/experiments/ENCSR329NAJ "histone,histone modification,broad histone mark" H3K4me1-human neural cell in vitro differentiated cells bradley-bernstein ENCODE3 no fastqs unrunnable ENCSR045HLL https://www.encodeproject.org/experiments/ENCSR045HLL "histone,histone modification,narrow histone mark" H3K4me2-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF249GIB https://www.encodeproject.org/files/ENCFF249GIB/@@download/ENCFF249GIB.bam ENCFF047GQK https://www.encodeproject.org/files/ENCFF047GQK/@@download/ENCFF047GQK.bam 90.6 M 0 85.2 M 0.940 SE 36 36 native 0.0 M 65.4 M 63.1 M 0.697 0.97 0.97 34.75 195 1.01 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7d09a0d-5b33-47d1-b89d-066f1b34f57e/@@download/cross_correlation_plot/ENCFF002AUZ-ENCFF002AUC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB712HHN,ENCLB981YPW" "bradley-bernstein:DNA_Lib 2139,bradley-bernstein:DNA_Lib 5109" "ENCFF002AUC,ENCFF002AUZ" HiSeq 2000 2016-10-19T05:18:23.122087+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039y4003690bbQQKkB2588f ENCSR045HLL https://www.encodeproject.org/experiments/ENCSR045HLL "histone,histone modification,narrow histone mark" H3K4me2-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF454FGI https://www.encodeproject.org/files/ENCFF454FGI/@@download/ENCFF454FGI.bam ENCFF045YKO https://www.encodeproject.org/files/ENCFF045YKO/@@download/ENCFF045YKO.bam 44.6 M 0 40.9 M 0.917 SE 36 36 native 0.0 M 32.6 M 27.7 M 0.622 0.87 0.87 7.61 195 1.03 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/01d4c033-33c8-47e5-b32f-8ecb4dc77a8d/@@download/cross_correlation_plot/ENCFF002AUW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB366QUP bradley-bernstein:DNA_Lib 5104 ENCFF002AUW HiSeq 2000 2016-10-19T05:17:13.513719+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039yf80369JJz4jV53b4F4b ENCSR608VNA https://www.encodeproject.org/experiments/ENCSR608VNA "histone,histone modification,narrow histone mark" H3K4me3-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF189PYS https://www.encodeproject.org/files/ENCFF189PYS/@@download/ENCFF189PYS.bam ENCFF707USU https://www.encodeproject.org/files/ENCFF707USU/@@download/ENCFF707USU.bam 118.3 M 0 110.7 M 0.936 SE 36 36 native 0.0 M 91.9 M 65.6 M 0.554 0.76 0.81 6.83 250 1.50 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/5705e70f-35ff-4ac1-9164-4c6b21814e1d/@@download/cross_correlation_plot/ENCFF002BBT-ENCFF002AYB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB805RMU,ENCLB354PZC" "bradley-bernstein:DNA_Lib 2352,bradley-bernstein:DNA_Lib 2349" "ENCFF002AYB,ENCFF002BBT" HiSeq 2000 2016-10-19T05:16:50.931686+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039vyj03695qv6vpjjkFzYP ENCSR608VNA https://www.encodeproject.org/experiments/ENCSR608VNA "histone,histone modification,narrow histone mark" H3K4me3-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF900CLO https://www.encodeproject.org/files/ENCFF900CLO/@@download/ENCFF900CLO.bam ENCFF224PED https://www.encodeproject.org/files/ENCFF224PED/@@download/ENCFF224PED.bam 44.2 M 0 40.5 M 0.916 SE 36 36 native 0.0 M 31.4 M 21.4 M 0.485 0.72 0.72 3.52 190 1.03 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6f33633-837c-4249-916d-ee6f31103fca/@@download/cross_correlation_plot/ENCFF002AUV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB922CKK bradley-bernstein:DNA_Lib 5105 ENCFF002AUV HiSeq 2000 2016-10-19T05:13:30.956437+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039x30036954VzX7b0xjPZ2 ENCSR076NBJ https://www.encodeproject.org/experiments/ENCSR076NBJ "histone,histone modification,broad histone mark" H3K79me2-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF081KHJ https://www.encodeproject.org/files/ENCFF081KHJ/@@download/ENCFF081KHJ.bam ENCFF251FNO https://www.encodeproject.org/files/ENCFF251FNO/@@download/ENCFF251FNO.bam 47.4 M 0 45.8 M 0.965 SE 36 36 native 0.0 M 37.1 M 20.0 M 0.422 0.55 0.54 2.15 200 1.03 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/12bf254b-5c3e-48f6-a860-c1956546bc71/@@download/cross_correlation_plot/ENCFF002AZD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB848JUC bradley-bernstein:DNA_Lib 5143 ENCFF002AZD HiSeq 2500 2016-10-19T05:13:55.309687+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039xjQ0369P3fb6Yb3bpy8Z ENCSR076NBJ https://www.encodeproject.org/experiments/ENCSR076NBJ "histone,histone modification,broad histone mark" H3K79me2-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF186JRI https://www.encodeproject.org/files/ENCFF186JRI/@@download/ENCFF186JRI.bam ENCFF148RCI https://www.encodeproject.org/files/ENCFF148RCI/@@download/ENCFF148RCI.bam 61.4 M 0 60.1 M 0.980 SE 36 36 native 0.0 M 47.1 M 44.1 M 0.719 0.94 0.94 15.94 -5 1.01 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/57b5ed58-1c30-4ddc-9b16-f70e0a3834f1/@@download/cross_correlation_plot/ENCFF002AWI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB603GMJ bradley-bernstein:DNA_Lib 5112 ENCFF002AWI HiSeq 2500 2016-10-19T05:15:49.190215+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F039xy003690fVXfKk3bqXv6 ENCSR531QHM https://www.encodeproject.org/experiments/ENCSR531QHM "histone,histone modification,narrow histone mark" H3K9ac-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF347JPW https://www.encodeproject.org/files/ENCFF347JPW/@@download/ENCFF347JPW.bam ENCFF552FRH https://www.encodeproject.org/files/ENCFF552FRH/@@download/ENCFF552FRH.bam 38.7 M 0 34.8 M 0.900 SE 36 36 36 0.0 M 27.0 M 26.1 M 0.675 0.97 0.97 35.45 195 1.18 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/37edfbed-d3e6-4158-aadc-63a8d44d40a5/@@download/cross_correlation_plot/ENCFF268SPR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB795NOW bradley-bernstein:DNA_Lib 2142 ENCFF268SPR HiSeq 2000 2016-10-25T04:56:02.429492+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079vP803693jfk2F435b9gQ ENCSR531QHM https://www.encodeproject.org/experiments/ENCSR531QHM "histone,histone modification,narrow histone mark" H3K9ac-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF592WCW https://www.encodeproject.org/files/ENCFF592WCW/@@download/ENCFF592WCW.bam ENCFF534PGD https://www.encodeproject.org/files/ENCFF534PGD/@@download/ENCFF534PGD.bam 44.7 M 0 43.9 M 0.983 SE 76 36 36 0.0 M 35.9 M 31.8 M 0.712 0.89 0.89 9.03 200 1.22 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2efb0ba-9d4a-49c3-84ee-1b9e90eb3e97/@@download/cross_correlation_plot/ENCFF387RVI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB985CAR bradley-bernstein:DNA_Lib 5784 ENCFF387RVI HiSeq 2500 2016-10-25T04:56:10.284280+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079vY00369FbzpJ7QFV16b5 ENCSR397HSO https://www.encodeproject.org/experiments/ENCSR397HSO "histone,histone modification,broad histone mark" H3K9me2-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF086VCV https://www.encodeproject.org/files/ENCFF086VCV/@@download/ENCFF086VCV.bam ENCFF108ERS https://www.encodeproject.org/files/ENCFF108ERS/@@download/ENCFF108ERS.bam 31.9 M 0 31.6 M 0.988 SE 76 36 36 0.0 M 24.6 M 23.4 M 0.731 0.95 0.95 20.08 190 1.01 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d6d79d5-f224-4b26-9b27-3479a6a7daec/@@download/cross_correlation_plot/ENCFF820VXW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB328CMO bradley-bernstein:DNA_Lib 5785 ENCFF820VXW HiSeq 2500 2016-10-25T04:58:52.279373+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079zZ803696zQK28j35GXjV ENCSR397HSO https://www.encodeproject.org/experiments/ENCSR397HSO "histone,histone modification,broad histone mark" H3K9me2-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF845FAQ https://www.encodeproject.org/files/ENCFF845FAQ/@@download/ENCFF845FAQ.bam ENCFF760EDC https://www.encodeproject.org/files/ENCFF760EDC/@@download/ENCFF760EDC.bam 72.4 M 0 70.9 M 0.980 SE 36 36 36 0.0 M 56.1 M 48.9 M 0.675 0.87 0.87 7.71 200 1.01 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/c18b7969-fb07-426a-b72f-02e8675a3846/@@download/cross_correlation_plot/ENCFF459MUJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB864VND bradley-bernstein:DNA_Lib 5113 ENCFF459MUJ HiSeq 2500 2016-10-25T05:01:11.744286+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F079zj00369F6QF32GzJxPkY ENCSR405NQJ https://www.encodeproject.org/experiments/ENCSR405NQJ "histone,histone modification,broad histone mark" H3K9me3-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF803XTV https://www.encodeproject.org/files/ENCFF803XTV/@@download/ENCFF803XTV.bam ENCFF789XCJ https://www.encodeproject.org/files/ENCFF789XCJ/@@download/ENCFF789XCJ.bam 62.9 M 0 58.6 M 0.932 SE 36 36 native 0.0 M 36.2 M 35.3 M 0.561 0.98 0.98 49.73 210 1.01 0.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/b83bad56-f182-4b80-b8ba-24fdb346916a/@@download/cross_correlation_plot/ENCFF481LMR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB876SYZ bradley-bernstein:DNA_Lib 2350 ENCFF481LMR HiSeq 2000 2016-10-19T16:35:35.737412+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F03Q4P003694P14vkJxP88q7 ENCSR405NQJ https://www.encodeproject.org/experiments/ENCSR405NQJ "histone,histone modification,broad histone mark" H3K9me3-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF603ERB https://www.encodeproject.org/files/ENCFF603ERB/@@download/ENCFF603ERB.bam ENCFF919MQD https://www.encodeproject.org/files/ENCFF919MQD/@@download/ENCFF919MQD.bam 51.1 M 0 45.7 M 0.894 SE 76 36 36 0.0 M 32.8 M 21.4 M 0.419 0.66 0.66 2.85 135 1.03 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/67afda70-f16c-40d8-8efa-b4302312324c/@@download/cross_correlation_plot/ENCFF705YPK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB360ROS bradley-bernstein:DNA_Lib 6224 ENCFF705YPK HiSeq 2500 2016-10-25T03:20:21.471650+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0587380369F2Ky8GGFkZVJj ENCSR958ZMM https://www.encodeproject.org/experiments/ENCSR958ZMM "histone,histone modification,broad histone mark" H4K20me1-human neural cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF015SDG https://www.encodeproject.org/files/ENCFF015SDG/@@download/ENCFF015SDG.bam ENCFF200VLM https://www.encodeproject.org/files/ENCFF200VLM/@@download/ENCFF200VLM.bam 43.7 M 0 41.5 M 0.949 SE 76 36 36 0.0 M 31.5 M 29.3 M 0.671 0.93 0.93 13.83 195 1.01 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/28c34c08-a938-40a4-b8b1-df6c3ae27e50/@@download/cross_correlation_plot/ENCFF662YPN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB191WDP bradley-bernstein:DNA_Lib 6059 ENCFF662YPN HiSeq 2000 2016-10-25T03:21:07.594191+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0588j0036937FjjzZv2vY25 ENCSR958ZMM https://www.encodeproject.org/experiments/ENCSR958ZMM "histone,histone modification,broad histone mark" H4K20me1-human neural cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF802CSY https://www.encodeproject.org/files/ENCFF802CSY/@@download/ENCFF802CSY.bam ENCFF199JSS https://www.encodeproject.org/files/ENCFF199JSS/@@download/ENCFF199JSS.bam 33.1 M 0 32.7 M 0.987 SE 76 36 36 0.0 M 25.1 M 21.5 M 0.651 0.86 0.85 6.67 180 1.01 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6db6cf1-e16d-4ff6-b9ed-59845714bf8e/@@download/cross_correlation_plot/ENCFF246PLS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB064FOH bradley-bernstein:DNA_Lib 5629 ENCFF246PLS HiSeq 2500 2016-10-25T04:59:51.086728+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07B08Q0369KYp8Kq8FK6xVf ENCSR603SVD https://www.encodeproject.org/experiments/ENCSR603SVD control Control-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF615RXB https://www.encodeproject.org/files/ENCFF615RXB/@@download/ENCFF615RXB.bam ENCFF757YUE https://www.encodeproject.org/files/ENCFF757YUE/@@download/ENCFF757YUE.bam 109.2 M 0 106.0 M 0.970 SE 76 76 native 0.0 M 94.4 M 90.9 M 0.832 0.96 0.97 30.69 230 1.00 3.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/0fc5fa31-e9d6-4604-be42-eec6eb293320/@@download/cross_correlation_plot/ENCFF082OUX-ENCFF682DEF-ENCFF679GQT-ENCFF533XEQ-ENCFF158HCZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB732LOO,ENCLB187GJN" "bradley-bernstein:DNA_Lib 8268,bradley-bernstein:DNA_Lib 7850" "ENCFF533XEQ,ENCFF158HCZ,ENCFF082OUX,ENCFF682DEF,ENCFF679GQT" HiSeq 2500 2016-11-11T04:56:33.765276+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJGvj0369BV37kpGJfBJ08 ENCSR603SVD https://www.encodeproject.org/experiments/ENCSR603SVD control Control-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF175BOB https://www.encodeproject.org/files/ENCFF175BOB/@@download/ENCFF175BOB.bam ENCFF144ISY https://www.encodeproject.org/files/ENCFF144ISY/@@download/ENCFF144ISY.bam 71.9 M 0 69.4 M 0.964 SE 76 76 native 0.0 M 61.5 M 59.6 M 0.829 0.97 0.97 38.47 210 1.01 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/569b6f72-c808-45ce-9d1e-717953474c10/@@download/cross_correlation_plot/ENCFF206YPV-ENCFF835QIF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB401NZN bradley-bernstein:DNA_Lib 8104 "ENCFF835QIF,ENCFF206YPV" HiSeq 2500 2016-11-11T04:53:11.289571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJJ500369JbJXk4G78GvZK ENCSR656MXA https://www.encodeproject.org/experiments/ENCSR656MXA "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF396SSG https://www.encodeproject.org/files/ENCFF396SSG/@@download/ENCFF396SSG.bam ENCFF399KST https://www.encodeproject.org/files/ENCFF399KST/@@download/ENCFF399KST.bam 40.8 M 0 39.7 M 0.973 SE 74 74 None 0.0 M 35.2 M 32.4 M 0.794 0.92 0.92 12.80 190 1.04 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/3555714c-718b-48fd-a616-8bb5dc9808b8/@@download/cross_correlation_plot/ENCFF961BDT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB061HLX bradley-bernstein:DNA_Lib 7270 ENCFF961BDT HiSeq 2500 2016-06-14T05:39:59.677252+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZxvQ03692Y2bVf1QGK0Xg ENCSR656MXA https://www.encodeproject.org/experiments/ENCSR656MXA "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF789JOT https://www.encodeproject.org/files/ENCFF789JOT/@@download/ENCFF789JOT.bam ENCFF798HTX https://www.encodeproject.org/files/ENCFF798HTX/@@download/ENCFF798HTX.bam 77.4 M 0 72.9 M 0.942 SE 76 76 native 0.0 M 64.9 M 59.3 M 0.766 0.92 0.92 12.27 195 1.03 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/be23055a-00ef-4d53-a430-0ddd81c55a48/@@download/cross_correlation_plot/ENCFF831CJZ-ENCFF009BTS-ENCFF281BEW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB940SYA bradley-bernstein:DNA_Lib 7972 "ENCFF281BEW,ENCFF009BTS,ENCFF831CJZ" HiSeq 2500 2016-11-11T04:49:47.224198+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJb8Q0369Fg632PQgV9xQ4 ENCSR677XPJ https://www.encodeproject.org/experiments/ENCSR677XPJ "histone,histone modification,narrow histone mark" H2AFZ-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF603XTR https://www.encodeproject.org/files/ENCFF603XTR/@@download/ENCFF603XTR.bam ENCFF523SUR https://www.encodeproject.org/files/ENCFF523SUR/@@download/ENCFF523SUR.bam 47.4 M 0 46.3 M 0.976 SE 74 None 0.0 M 42.0 M 40.7 M 0.858 0.97 0.97 31.34 185 1.03 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0072981-66d7-441d-8e72-1d75cc6d8d14/@@download/cross_correlation_plot/ENCFF783GLC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB855OWN bradley-bernstein:DNA_Lib 7267 ENCFF783GLC HiSeq 2500 2016-06-14T05:41:01.697165+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZxGj03692Y2bVf1QGK0VY ENCSR677XPJ https://www.encodeproject.org/experiments/ENCSR677XPJ "histone,histone modification,narrow histone mark" H2AFZ-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF263UKH https://www.encodeproject.org/files/ENCFF263UKH/@@download/ENCFF263UKH.bam ENCFF256TDX https://www.encodeproject.org/files/ENCFF256TDX/@@download/ENCFF256TDX.bam 29.8 M 0 29.1 M 0.977 SE 76 None 0.0 M 26.9 M 26.3 M 0.885 0.98 0.98 47.22 180 1.04 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/a01991bd-2ab9-4c88-8134-fef77981e8b2/@@download/cross_correlation_plot/ENCFF638REQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB441MHI bradley-bernstein:DNA_Lib 7968 ENCFF638REQ HiSeq 2500 2016-06-14T05:40:24.099164+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZxPQ0369GzZgFyQQ2GfBv ENCSR591KSN https://www.encodeproject.org/experiments/ENCSR591KSN "histone,histone modification,broad histone mark" H3F3A-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF959UWS https://www.encodeproject.org/files/ENCFF959UWS/@@download/ENCFF959UWS.bam ENCFF419IGW https://www.encodeproject.org/files/ENCFF419IGW/@@download/ENCFF419IGW.bam 51.0 M 0 49.0 M 0.962 SE 74 None 0.0 M 43.1 M 41.6 M 0.815 0.96 0.97 30.37 185 1.02 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/839c40e1-269e-4370-ade7-4bcfd0116701/@@download/cross_correlation_plot/ENCFF792KDV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB613CDJ bradley-bernstein:DNA_Lib 7269 ENCFF792KDV HiSeq 2500 2016-06-14T05:41:25.729951+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZx2003695KXZB2GQqK2J9 ENCSR591KSN https://www.encodeproject.org/experiments/ENCSR591KSN "histone,histone modification,broad histone mark" H3F3A-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF384FAC https://www.encodeproject.org/files/ENCFF384FAC/@@download/ENCFF384FAC.bam ENCFF860KVW https://www.encodeproject.org/files/ENCFF860KVW/@@download/ENCFF860KVW.bam 67.8 M 0 63.8 M 0.941 SE 76 76 native 0.0 M 56.8 M 54.5 M 0.804 0.96 0.97 39.78 220 1.02 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/a42bcfa3-0ae7-4693-8098-fbe2f999edb9/@@download/cross_correlation_plot/ENCFF590DZE-ENCFF039BWA-ENCFF399ZRK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB419HIC bradley-bernstein:DNA_Lib 7970 "ENCFF590DZE,ENCFF039BWA,ENCFF399ZRK" HiSeq 2500 2017-03-29T21:15:30.087044+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3JyG4003698VKj1PK132ZF7 ENCSR449AXO https://www.encodeproject.org/experiments/ENCSR449AXO "histone,histone modification,narrow histone mark" H3K27ac-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF802FBW https://www.encodeproject.org/files/ENCFF802FBW/@@download/ENCFF802FBW.bam ENCFF845SHW https://www.encodeproject.org/files/ENCFF845SHW/@@download/ENCFF845SHW.bam 37.0 M 0 35.1 M 0.946 SE 76 76 native 0.0 M 32.3 M 31.4 M 0.849 0.97 0.97 39.69 185 1.06 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/d91d201c-c998-46d7-aec3-32d81e0046f8/@@download/cross_correlation_plot/ENCFF860HDF-ENCFF181EVF-ENCFF785ZLV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB873ZLW bradley-bernstein:DNA_Lib 7844 "ENCFF181EVF,ENCFF860HDF,ENCFF785ZLV" HiSeq 2500 2016-11-11T04:43:50.705373+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJgQj03698Zpf0YjvBxv23 ENCSR449AXO https://www.encodeproject.org/experiments/ENCSR449AXO "histone,histone modification,narrow histone mark" H3K27ac-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF826AZF https://www.encodeproject.org/files/ENCFF826AZF/@@download/ENCFF826AZF.bam ENCFF391TNJ https://www.encodeproject.org/files/ENCFF391TNJ/@@download/ENCFF391TNJ.bam 43.4 M 0 42.5 M 0.978 SE 74 None 0.0 M 38.5 M 32.6 M 0.749 0.85 0.84 6.14 170 1.02 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee820a92-116a-4afa-bbfd-7cb8d8cffecb/@@download/cross_correlation_plot/ENCFF932YFI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB953HPX bradley-bernstein:DNA_Lib 7299 ENCFF932YFI HiSeq 2500 2016-06-14T05:38:00.751032+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZz5j0369B0QYY1QQXVfPY ENCSR139PIA https://www.encodeproject.org/experiments/ENCSR139PIA "histone,histone modification,broad histone mark" H3K27me3-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF951AJL https://www.encodeproject.org/files/ENCFF951AJL/@@download/ENCFF951AJL.bam ENCFF154JSV https://www.encodeproject.org/files/ENCFF154JSV/@@download/ENCFF154JSV.bam 85.1 M 0 82.9 M 0.974 SE "76,74" None 0.0 M 73.4 M 48.4 M 0.568 0.67 0.67 3.04 185 1.05 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/c661c40a-5284-4a60-b429-fc5963c2d2da/@@download/cross_correlation_plot/ENCFF274TFF-ENCFF594FRP_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB800FFW,ENCLB177VVW" "bradley-bernstein:DNA_Lib 7055,bradley-bernstein:DNA_Lib 7300" "ENCFF594FRP,ENCFF274TFF" HiSeq 2500 2016-06-14T05:37:59.298260+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZz8j0369GP5gb3GQpQ8z1 ENCSR139PIA https://www.encodeproject.org/experiments/ENCSR139PIA "histone,histone modification,broad histone mark" H3K27me3-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF219YIY https://www.encodeproject.org/files/ENCFF219YIY/@@download/ENCFF219YIY.bam ENCFF030FLL https://www.encodeproject.org/files/ENCFF030FLL/@@download/ENCFF030FLL.bam 70.1 M 0 66.0 M 0.942 SE 76 None 0.0 M 58.4 M 52.8 M 0.754 0.91 0.91 12.09 190 1.06 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/35083b3b-17bc-4425-a44d-45c7227d87e9/@@download/cross_correlation_plot/ENCFF731UMJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB107NYY bradley-bernstein:DNA_Lib 7843 ENCFF731UMJ HiSeq 2500 2016-06-14T05:38:37.058188+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZzF80369GP5gb3GQpQ8zB ENCSR573CWZ https://www.encodeproject.org/experiments/ENCSR573CWZ "histone,histone modification,broad histone mark" H3K36me3-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF194DXN https://www.encodeproject.org/files/ENCFF194DXN/@@download/ENCFF194DXN.bam ENCFF232EQC https://www.encodeproject.org/files/ENCFF232EQC/@@download/ENCFF232EQC.bam 75.4 M 0 70.6 M 0.936 SE 76 76 native 0.0 M 62.3 M 60.4 M 0.801 0.97 0.97 39.81 190 1.00 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/0611a05d-2549-45aa-a9d9-0e13a53bbf18/@@download/cross_correlation_plot/ENCFF028XTC-ENCFF931HVH-ENCFF814YHM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB022NIZ bradley-bernstein:DNA_Lib 7845 "ENCFF028XTC,ENCFF931HVH,ENCFF814YHM" HiSeq 2500 2016-11-11T04:51:01.155965+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJZp003697Zv0BGQfjVX61 ENCSR573CWZ https://www.encodeproject.org/experiments/ENCSR573CWZ "histone,histone modification,broad histone mark" H3K36me3-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF059ZLL https://www.encodeproject.org/files/ENCFF059ZLL/@@download/ENCFF059ZLL.bam ENCFF201YEP https://www.encodeproject.org/files/ENCFF201YEP/@@download/ENCFF201YEP.bam 96.4 M 0 91.9 M 0.954 SE 76 76 native 0.0 M 79.2 M 71.7 M 0.744 0.91 0.91 10.52 180 1.01 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb0d936e-2c4d-49d2-8815-fd9628a4221b/@@download/cross_correlation_plot/ENCFF606KSK-ENCFF583RXS-ENCFF693MAI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB890WSL bradley-bernstein:DNA_Lib 7051 "ENCFF693MAI,ENCFF583RXS,ENCFF606KSK" HiSeq 2500 2016-11-11T04:52:06.003296+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJb0Q0369GkQ04qZq0xJVf ENCSR274OIJ https://www.encodeproject.org/experiments/ENCSR274OIJ "histone,histone modification,broad histone mark" H3K4me1-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF574DVZ https://www.encodeproject.org/files/ENCFF574DVZ/@@download/ENCFF574DVZ.bam ENCFF481MNJ https://www.encodeproject.org/files/ENCFF481MNJ/@@download/ENCFF481MNJ.bam 79.5 M 0 73.1 M 0.920 SE 76 76 native 0.0 M 66.5 M 64.5 M 0.811 0.97 0.97 37.13 180 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf108543-6b11-474b-9f9c-2fe50f25a679/@@download/cross_correlation_plot/ENCFF846DBW-ENCFF271XPG-ENCFF527ZQK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB452SDT bradley-bernstein:DNA_Lib 7840 "ENCFF527ZQK,ENCFF271XPG,ENCFF846DBW" HiSeq 2500 2016-11-11T04:46:50.365422+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJfx00369Fg632PQgV9xVX ENCSR274OIJ https://www.encodeproject.org/experiments/ENCSR274OIJ "histone,histone modification,broad histone mark" H3K4me1-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF206UNV https://www.encodeproject.org/files/ENCFF206UNV/@@download/ENCFF206UNV.bam ENCFF273CIR https://www.encodeproject.org/files/ENCFF273CIR/@@download/ENCFF273CIR.bam 128.0 M 0 124.7 M 0.974 SE "76,74" 74 native 0.0 M 113.5 M 104.2 M 0.814 0.92 0.93 13.34 210 1.01 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/74a007eb-2a88-4164-9cf5-e156585c15dd/@@download/cross_correlation_plot/ENCFF915YIM-ENCFF806DZD-ENCFF357QYZ-ENCFF026PPO-ENCFF415FCB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB251ALY,ENCLB755YGZ" "bradley-bernstein:DNA_Lib 8267,bradley-bernstein:DNA_Lib 7262" "ENCFF357QYZ,ENCFF806DZD,ENCFF026PPO,ENCFF915YIM,ENCFF415FCB" HiSeq 2500 2016-11-11T04:56:39.699825+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJQG003690VBK7Zv5vZF36 ENCSR645BCH https://www.encodeproject.org/experiments/ENCSR645BCH "histone,histone modification,narrow histone mark" H3K4me2-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF976CGT https://www.encodeproject.org/files/ENCFF976CGT/@@download/ENCFF976CGT.bam ENCFF071ZLF https://www.encodeproject.org/files/ENCFF071ZLF/@@download/ENCFF071ZLF.bam 38.7 M 0 37.7 M 0.974 SE 74 None 0.0 M 34.2 M 32.8 M 0.849 0.96 0.96 25.87 200 1.07 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b0c4074-35c0-4a83-bbd9-1a17a5ef62a8/@@download/cross_correlation_plot/ENCFF701VPH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB624GCW bradley-bernstein:DNA_Lib 7263 ENCFF701VPH HiSeq 2500 2016-06-14T05:40:51.001176+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZx7Q03692064pp5Jkk8Yj ENCSR645BCH https://www.encodeproject.org/experiments/ENCSR645BCH "histone,histone modification,narrow histone mark" H3K4me2-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF926HEW https://www.encodeproject.org/files/ENCFF926HEW/@@download/ENCFF926HEW.bam ENCFF737DWD https://www.encodeproject.org/files/ENCFF737DWD/@@download/ENCFF737DWD.bam 74.3 M 0 70.9 M 0.954 SE 76 None 0.0 M 64.7 M 61.4 M 0.826 0.95 0.95 21.11 190 1.09 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a328c3f-07fa-4bab-9a75-c83a05ca5bcc/@@download/cross_correlation_plot/ENCFF599YIH-ENCFF056DGU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB850PHM,ENCLB736ZNB" "bradley-bernstein:DNA_Lib 7888,bradley-bernstein:DNA_Lib 7841" "ENCFF056DGU,ENCFF599YIH" HiSeq 2500 2016-06-14T05:42:37.015361+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZxB00369GzZgFyQQ2GfBQ ENCSR661MUS https://www.encodeproject.org/experiments/ENCSR661MUS "histone,histone modification,narrow histone mark" H3K4me3-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF224OZC https://www.encodeproject.org/files/ENCFF224OZC/@@download/ENCFF224OZC.bam ENCFF685MTQ https://www.encodeproject.org/files/ENCFF685MTQ/@@download/ENCFF685MTQ.bam 58.9 M 0 55.5 M 0.941 SE 76 None 0.0 M 50.1 M 46.6 M 0.790 0.93 0.94 17.09 215 1.29 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/296c7ded-de76-4088-8ff9-5cb5fae3e783/@@download/cross_correlation_plot/ENCFF117GAU-ENCFF236HBR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB017NRI,ENCLB442FVF" "bradley-bernstein:DNA_Lib 7889,bradley-bernstein:DNA_Lib 7842" "ENCFF117GAU,ENCFF236HBR" HiSeq 2500 2016-06-14T05:41:06.443109+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZyjj036904gYJx0Q1Kzgy ENCSR661MUS https://www.encodeproject.org/experiments/ENCSR661MUS "histone,histone modification,narrow histone mark" H3K4me3-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF509PFO https://www.encodeproject.org/files/ENCFF509PFO/@@download/ENCFF509PFO.bam ENCFF575AVH https://www.encodeproject.org/files/ENCFF575AVH/@@download/ENCFF575AVH.bam 72.1 M 0 69.9 M 0.969 SE 76 None 0.0 M 60.5 M 56.5 M 0.784 0.94 0.94 16.91 215 1.10 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9a37b5e-99ec-433f-b724-2f07fb63b1d7/@@download/cross_correlation_plot/ENCFF133QBN-ENCFF201NLT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB442CUJ,ENCLB918HEV" "bradley-bernstein:DNA_Lib 7053,bradley-bernstein:DNA_Lib 7484" "ENCFF201NLT,ENCFF133QBN" HiSeq 2500 2016-06-14T05:41:14.133310+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZyq80369GP5gb3GQpQ8yB ENCSR518LDN https://www.encodeproject.org/experiments/ENCSR518LDN "histone,histone modification,broad histone mark" H3K79me2-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF365QXN https://www.encodeproject.org/files/ENCFF365QXN/@@download/ENCFF365QXN.bam ENCFF166AKW https://www.encodeproject.org/files/ENCFF166AKW/@@download/ENCFF166AKW.bam 56.4 M 0 54.7 M 0.970 SE 74 None 0.0 M 48.8 M 47.1 M 0.835 0.97 0.97 29.79 185 1.02 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/c28cea66-856d-4fea-b769-c2abe78dff7a/@@download/cross_correlation_plot/ENCFF696SMP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB918MAC bradley-bernstein:DNA_Lib 7268 ENCFF696SMP HiSeq 2500 2016-06-14T05:41:05.592912+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZyJj0369By4qQ0GQV5k7y ENCSR518LDN https://www.encodeproject.org/experiments/ENCSR518LDN "histone,histone modification,broad histone mark" H3K79me2-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF832CRS https://www.encodeproject.org/files/ENCFF832CRS/@@download/ENCFF832CRS.bam ENCFF530RAW https://www.encodeproject.org/files/ENCFF530RAW/@@download/ENCFF530RAW.bam 42.0 M 0 40.7 M 0.971 SE 76 None 0.0 M 37.5 M 36.1 M 0.861 0.96 0.97 29.18 165 1.03 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca1e3683-f771-4e20-bb13-36116b8b28ab/@@download/cross_correlation_plot/ENCFF085XGU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB622ASL bradley-bernstein:DNA_Lib 7969 ENCFF085XGU HiSeq 2500 2016-06-14T05:40:15.095968+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZyQ80369GzZgFyQQ2GfJq ENCSR105NMJ https://www.encodeproject.org/experiments/ENCSR105NMJ "histone,histone modification,narrow histone mark" H3K9ac-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF312SGS https://www.encodeproject.org/files/ENCFF312SGS/@@download/ENCFF312SGS.bam ENCFF445GNQ https://www.encodeproject.org/files/ENCFF445GNQ/@@download/ENCFF445GNQ.bam 48.7 M 0 47.5 M 0.975 SE 74 None 0.0 M 42.9 M 39.5 M 0.809 0.92 0.92 12.45 185 1.02 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/4db0b83b-f9a7-42a6-8b19-eb6ab13cc5a7/@@download/cross_correlation_plot/ENCFF353DNN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB913XSR bradley-bernstein:DNA_Lib 7266 ENCFF353DNN HiSeq 2500 2016-06-14T05:41:10.126667+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZxX803692Y2bVf1QGK0X4 ENCSR105NMJ https://www.encodeproject.org/experiments/ENCSR105NMJ "histone,histone modification,narrow histone mark" H3K9ac-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF007IUM https://www.encodeproject.org/files/ENCFF007IUM/@@download/ENCFF007IUM.bam ENCFF915ZDI https://www.encodeproject.org/files/ENCFF915ZDI/@@download/ENCFF915ZDI.bam 37.1 M 0 35.6 M 0.959 SE 76 76 native 0.0 M 32.8 M 31.1 M 0.836 0.95 0.95 18.69 205 1.04 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c2caffa-bc40-4572-84f1-d968d750e938/@@download/cross_correlation_plot/ENCFF114RWY-ENCFF880SCK-ENCFF037YIR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB240HBB bradley-bernstein:DNA_Lib 7967 "ENCFF037YIR,ENCFF880SCK,ENCFF114RWY" HiSeq 2500 2016-11-11T04:50:17.818464+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJZJj0369GkQ04qZq0xJKP ENCSR256KTR https://www.encodeproject.org/experiments/ENCSR256KTR "histone,histone modification,broad histone mark" H3K9me3-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF565ZZO https://www.encodeproject.org/files/ENCFF565ZZO/@@download/ENCFF565ZZO.bam ENCFF728DHR https://www.encodeproject.org/files/ENCFF728DHR/@@download/ENCFF728DHR.bam 55.0 M 0 52.3 M 0.950 SE 76 76 native 0.0 M 41.4 M 38.3 M 0.696 0.93 0.93 14.23 185 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ad7cf6f-1c4c-460e-97ed-d616dec81c9d/@@download/cross_correlation_plot/ENCFF548LNZ-ENCFF185CXD-ENCFF050UUH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB536PES bradley-bernstein:DNA_Lib 7052 "ENCFF050UUH,ENCFF185CXD,ENCFF548LNZ" HiSeq 2500 2016-11-11T04:46:21.930441+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XJf78036943QZfqQP8PpvP ENCSR256KTR https://www.encodeproject.org/experiments/ENCSR256KTR "histone,histone modification,broad histone mark" H3K9me3-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF986HAZ https://www.encodeproject.org/files/ENCFF986HAZ/@@download/ENCFF986HAZ.bam ENCFF683QAK https://www.encodeproject.org/files/ENCFF683QAK/@@download/ENCFF683QAK.bam 41.4 M 0 39.4 M 0.953 SE 76 None 0.0 M 32.8 M 30.9 M 0.748 0.94 0.95 20.73 225 1.01 0.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1b02196-3778-47ee-8d92-a867a270c892/@@download/cross_correlation_plot/ENCFF298PVV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB460ZVK bradley-bernstein:DNA_Lib 7847 ENCFF298PVV HiSeq 2500 2016-06-14T05:40:25.175551+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZy6003692Y2bVf1QGK0YF ENCSR720ZAX https://www.encodeproject.org/experiments/ENCSR720ZAX "histone,histone modification,broad histone mark" H4K20me1-human neural progenitor cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF069ESP https://www.encodeproject.org/files/ENCFF069ESP/@@download/ENCFF069ESP.bam ENCFF595WAG https://www.encodeproject.org/files/ENCFF595WAG/@@download/ENCFF595WAG.bam 48.5 M 0 47.0 M 0.970 SE 74 None 0.0 M 42.2 M 40.3 M 0.831 0.96 0.96 22.93 185 1.01 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/b93e1992-f2c9-4729-828b-3d6731f7f98f/@@download/cross_correlation_plot/ENCFF950UWR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB426DVL bradley-bernstein:DNA_Lib 7265 ENCFF950UWR HiSeq 2500 2016-06-14T05:40:21.863912+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZyy00369By4qQ0GQV5k9b ENCSR720ZAX https://www.encodeproject.org/experiments/ENCSR720ZAX "histone,histone modification,broad histone mark" H4K20me1-human neural progenitor cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF255VSG https://www.encodeproject.org/files/ENCFF255VSG/@@download/ENCFF255VSG.bam ENCFF878JBC https://www.encodeproject.org/files/ENCFF878JBC/@@download/ENCFF878JBC.bam 49.1 M 0 47.7 M 0.970 SE 76 None 0.0 M 43.9 M 40.6 M 0.826 0.93 0.93 13.54 220 1.01 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/95670206-bbf0-47b8-aa5d-7ade11954498/@@download/cross_correlation_plot/ENCFF663PZT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB724RJJ bradley-bernstein:DNA_Lib 7966 ENCFF663PZT HiSeq 2500 2016-06-14T05:40:28.790823+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZz0803692Y2bVf1QGK0f3 ENCSR803UDX https://www.encodeproject.org/experiments/ENCSR803UDX control Control-human neuroepithelial stem cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF339IBW https://www.encodeproject.org/files/ENCFF339IBW/@@download/ENCFF339IBW.bam ENCFF484PBB https://www.encodeproject.org/files/ENCFF484PBB/@@download/ENCFF484PBB.bam 49.8 M 0 47.4 M 0.951 SE 36 36 None 0.0 M 34.1 M 33.3 M 0.668 0.98 0.98 55.77 0 1.01 0.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/48d9db53-dcf7-439a-bc53-85f8eab5ab48/@@download/cross_correlation_plot/ENCFF299QHU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB211AGJ bradley-bernstein:DNA_Lib 3837 ENCFF299QHU HiSeq 2000 2016-05-06T18:05:03.676364+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqbKj0369GkFPvq42zg1x0 ENCSR803UDX https://www.encodeproject.org/experiments/ENCSR803UDX control Control-human neuroepithelial stem cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF930INE https://www.encodeproject.org/files/ENCFF930INE/@@download/ENCFF930INE.bam ENCFF037MPZ https://www.encodeproject.org/files/ENCFF037MPZ/@@download/ENCFF037MPZ.bam 64.8 M 0 63.1 M 0.974 SE 36 36 None 0.0 M 49.1 M 46.2 M 0.713 0.95 0.95 18.24 200 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/8867522a-84b6-4ebf-bed8-a1aa7efbf71f/@@download/cross_correlation_plot/ENCFF531PAG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB843KFD bradley-bernstein:DNA_Lib 5071 ENCFF531PAG HiSeq 2500 2016-05-06T18:05:17.594928+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqbQQ03691Q4QQpZ2q8Bq4 ENCSR842NGQ https://www.encodeproject.org/experiments/ENCSR842NGQ "histone,histone modification,narrow histone mark" H3K27ac-human neuroepithelial stem cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF422KZV https://www.encodeproject.org/files/ENCFF422KZV/@@download/ENCFF422KZV.bam ENCFF388JEP https://www.encodeproject.org/files/ENCFF388JEP/@@download/ENCFF388JEP.bam 37.0 M 0 36.2 M 0.979 SE 76 36 36 0.0 M 30.6 M 21.7 M 0.585 0.71 0.70 3.12 205 1.39 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9744656-6009-42d9-8d15-d9587d642365/@@download/cross_correlation_plot/ENCFF069PVZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB588HPA bradley-bernstein:DNA_Lib 6255 ENCFF069PVZ HiSeq 2500 2016-10-29T04:58:34.460033+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xKjj0369BX1xqb1B818bY ENCSR842NGQ https://www.encodeproject.org/experiments/ENCSR842NGQ "histone,histone modification,narrow histone mark" H3K27ac-human neuroepithelial stem cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF400SMX https://www.encodeproject.org/files/ENCFF400SMX/@@download/ENCFF400SMX.bam ENCFF546QRF https://www.encodeproject.org/files/ENCFF546QRF/@@download/ENCFF546QRF.bam 39.0 M 0 38.2 M 0.980 SE 76 36 36 0.0 M 31.1 M 26.3 M 0.674 0.85 0.84 6.21 180 1.04 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c056b11-d810-4708-ab55-356f1218a198/@@download/cross_correlation_plot/ENCFF465TFC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB523UOL bradley-bernstein:DNA_Lib 6061 ENCFF465TFC HiSeq 2500 2016-10-29T04:58:30.060608+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xKx003692g2Q4k5K0k5Q0 ENCSR407BLO https://www.encodeproject.org/experiments/ENCSR407BLO "histone,histone modification,broad histone mark" H3K27me3-human neuroepithelial stem cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF962TLW https://www.encodeproject.org/files/ENCFF962TLW/@@download/ENCFF962TLW.bam ENCFF600NRD https://www.encodeproject.org/files/ENCFF600NRD/@@download/ENCFF600NRD.bam 47.2 M 0 42.8 M 0.907 SE 36 36 native 0.0 M 32.9 M 23.9 M 0.507 0.76 0.76 4.18 190 1.04 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f4f8968-dcb2-46d8-b5af-a06a84db4f15/@@download/cross_correlation_plot/ENCFF265QNX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB448COJ bradley-bernstein:DNA_Lib 5118 ENCFF265QNX HiSeq 2000 2016-10-29T04:20:13.536410+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v77j0369P876f29P7QJX7 ENCSR407BLO https://www.encodeproject.org/experiments/ENCSR407BLO "histone,histone modification,broad histone mark" H3K27me3-human neuroepithelial stem cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF099DFY https://www.encodeproject.org/files/ENCFF099DFY/@@download/ENCFF099DFY.bam ENCFF240GPT https://www.encodeproject.org/files/ENCFF240GPT/@@download/ENCFF240GPT.bam 29.6 M 0 26.5 M 0.896 SE 36 36 native 0.0 M 17.9 M 3.6 M 0.121 0.24 0.35 2.37 220 1.16 3.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/0597327f-3a28-424f-8d07-4f0f7420796a/@@download/cross_correlation_plot/ENCFF864ECI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB591OPY bradley-bernstein:DNA_Lib 3123 ENCFF864ECI HiSeq 2000 2016-10-29T04:18:55.434237+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v7G0036913377YJjkvPQB ENCSR688ZOS https://www.encodeproject.org/experiments/ENCSR688ZOS "histone,histone modification,broad histone mark" H3K36me3-human neuroepithelial stem cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF402JUW https://www.encodeproject.org/files/ENCFF402JUW/@@download/ENCFF402JUW.bam ENCFF912MJY https://www.encodeproject.org/files/ENCFF912MJY/@@download/ENCFF912MJY.bam 49.3 M 0 48.2 M 0.979 SE 76 36 36 0.0 M 35.9 M 27.3 M 0.555 0.76 0.75 3.93 190 1.02 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/b433fafa-7110-4e86-b0c6-b6d32e98c63a/@@download/cross_correlation_plot/ENCFF610RHZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB717TKR bradley-bernstein:DNA_Lib 6060 ENCFF610RHZ HiSeq 2500 2016-10-29T04:59:10.716969+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xPG80369Bj2bF0JP9K2Bb ENCSR688ZOS https://www.encodeproject.org/experiments/ENCSR688ZOS "histone,histone modification,broad histone mark" H3K36me3-human neuroepithelial stem cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF028SBN https://www.encodeproject.org/files/ENCFF028SBN/@@download/ENCFF028SBN.bam ENCFF227JKM https://www.encodeproject.org/files/ENCFF227JKM/@@download/ENCFF227JKM.bam 35.8 M 0 33.0 M 0.922 SE 36 36 native 0.0 M 24.7 M 17.6 M 0.491 0.75 0.75 3.93 210 1.02 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ace5677-9bf6-4e03-9efc-f783edca219a/@@download/cross_correlation_plot/ENCFF755RTB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB678TOF bradley-bernstein:DNA_Lib 5116 ENCFF755RTB HiSeq 2000 2016-10-29T04:20:37.400340+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v8VQ03699pQzk2JB6Kv3J ENCSR890NXD https://www.encodeproject.org/experiments/ENCSR890NXD "histone,histone modification,broad histone mark" H3K4me1-human neuroepithelial stem cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF424BTE https://www.encodeproject.org/files/ENCFF424BTE/@@download/ENCFF424BTE.bam ENCFF896EBS https://www.encodeproject.org/files/ENCFF896EBS/@@download/ENCFF896EBS.bam 42.7 M 0 39.4 M 0.922 SE 36 36 native 0.0 M 30.5 M 26.4 M 0.617 0.88 0.87 7.76 220 1.02 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/cbd80865-436b-4271-9017-d0a99244683a/@@download/cross_correlation_plot/ENCFF005WFQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB248HAC bradley-bernstein:DNA_Lib 3096 ENCFF005WFQ HiSeq 2000 2016-10-29T04:20:15.494246+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v7gQ0369P876f29P7QJXj ENCSR890NXD https://www.encodeproject.org/experiments/ENCSR890NXD "histone,histone modification,broad histone mark" H3K4me1-human neuroepithelial stem cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF847HRV https://www.encodeproject.org/files/ENCFF847HRV/@@download/ENCFF847HRV.bam ENCFF322DCA https://www.encodeproject.org/files/ENCFF322DCA/@@download/ENCFF322DCA.bam 36.8 M 0 34.4 M 0.935 SE 36 36 native 0.0 M 27.3 M 21.3 M 0.579 0.81 0.81 5.12 200 1.02 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/80f7b92a-0f26-49ba-9544-8f45c4044356/@@download/cross_correlation_plot/ENCFF661UWX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB823HNC bradley-bernstein:DNA_Lib 5114 ENCFF661UWX HiSeq 2000 2016-10-29T04:20:57.634991+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v7y003692g2Q4k5K0k586 ENCSR662PLB https://www.encodeproject.org/experiments/ENCSR662PLB "histone,histone modification,narrow histone mark" H3K4me3-human neuroepithelial stem cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF558DIC https://www.encodeproject.org/files/ENCFF558DIC/@@download/ENCFF558DIC.bam ENCFF206KNV https://www.encodeproject.org/files/ENCFF206KNV/@@download/ENCFF206KNV.bam 42.5 M 0 41.3 M 0.970 SE 76 36 36 0.0 M 31.0 M 25.9 M 0.610 0.84 0.85 7.25 210 1.76 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/926d21e5-4198-4ab7-970e-6d9a96aabd41/@@download/cross_correlation_plot/ENCFF614IRR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB445WPO bradley-bernstein:DNA_Lib 6256 ENCFF614IRR HiSeq 2500 2017-01-09T04:58:49.685453+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3P764003699883Y8Kzfb9XQ ENCSR662PLB https://www.encodeproject.org/experiments/ENCSR662PLB "histone,histone modification,narrow histone mark" H3K4me3-human neuroepithelial stem cell in vitro differentiated cells 3 bradley-bernstein ENCODE3 GRCh38 ENCFF444FPS https://www.encodeproject.org/files/ENCFF444FPS/@@download/ENCFF444FPS.bam ENCFF951FIZ https://www.encodeproject.org/files/ENCFF951FIZ/@@download/ENCFF951FIZ.bam 31.6 M 0 30.4 M 0.963 SE 76 36 36 0.0 M 21.6 M 15.7 M 0.499 0.73 0.72 3.37 185 1.05 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/a093a2e8-4cf8-4e5b-ab1f-aad63f0d87ae/@@download/cross_correlation_plot/ENCFF660GMT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB200JGZ bradley-bernstein:DNA_Lib 5633 ENCFF660GMT HiSeq 2500 2016-10-29T04:57:58.530167+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3P768j03699883Y8Kzfb9Xk ENCSR856IKQ https://www.encodeproject.org/experiments/ENCSR856IKQ "histone,histone modification,broad histone mark" H3K9me3-human neuroepithelial stem cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF894DJZ https://www.encodeproject.org/files/ENCFF894DJZ/@@download/ENCFF894DJZ.bam ENCFF089AVJ https://www.encodeproject.org/files/ENCFF089AVJ/@@download/ENCFF089AVJ.bam 31.9 M 0 30.6 M 0.960 SE 36 36 36 0.0 M 20.2 M 19.8 M 0.623 0.98 0.98 60.75 185 1.01 0.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9c868c3-216f-40e1-89d6-88695cf52aaa/@@download/cross_correlation_plot/ENCFF201HOC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559HDW bradley-bernstein:DNA_Lib 3831 ENCFF201HOC HiSeq 2000 2016-10-29T04:58:49.397011+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xPf80369JYX7855VG0GxP ENCSR856IKQ https://www.encodeproject.org/experiments/ENCSR856IKQ "histone,histone modification,broad histone mark" H3K9me3-human neuroepithelial stem cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF182FPG https://www.encodeproject.org/files/ENCFF182FPG/@@download/ENCFF182FPG.bam ENCFF956OQK https://www.encodeproject.org/files/ENCFF956OQK/@@download/ENCFF956OQK.bam 96.9 M 0 92.9 M 0.958 SE "76,36" 36 36 0.0 M 66.2 M 55.7 M 0.574 0.86 0.88 10.32 210 1.01 0.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a5ead01-f419-4f6b-95e1-7600796ae388/@@download/cross_correlation_plot/ENCFF578PRV-ENCFF756LAS_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB746XDH,ENCLB297PCK" "bradley-bernstein:DNA_Lib 7980,bradley-bernstein:DNA_Lib 5119" "ENCFF756LAS,ENCFF578PRV" "HiSeq 2000,HiSeq 2500" 2016-10-29T05:01:03.872317+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09xPpj0369J70k2QVF5F28F ENCSR557RDB https://www.encodeproject.org/experiments/ENCSR557RDB control Control-human neutrophil primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF557VQL https://www.encodeproject.org/files/ENCFF557VQL/@@download/ENCFF557VQL.bam ENCFF689KUQ https://www.encodeproject.org/files/ENCFF689KUQ/@@download/ENCFF689KUQ.bam 82.5 M 0 76.9 M 0.931 SE 76 76 native 0.0 M 67.2 M 64.9 M 0.786 0.97 0.97 30.31 200 1.00 0.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3c2853f-a237-4119-acd1-c04f4d09dea9/@@download/cross_correlation_plot/ENCFF485UYV-ENCFF170LRD-ENCFF410DXF-ENCFF784DBC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119HLI bradley-bernstein:DNA_Lib 8103 "ENCFF784DBC,ENCFF410DXF,ENCFF170LRD,ENCFF485UYV" HiSeq 2500 2016-11-16T00:15:31.876952+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bbybj0369K4JbVzZ5F4Y2Q ENCSR557RDB https://www.encodeproject.org/experiments/ENCSR557RDB control Control-human neutrophil primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF944NDZ https://www.encodeproject.org/files/ENCFF944NDZ/@@download/ENCFF944NDZ.bam ENCFF392UYM https://www.encodeproject.org/files/ENCFF392UYM/@@download/ENCFF392UYM.bam 63.7 M 0 60.6 M 0.952 SE 76 76 native 0.0 M 53.3 M 50.5 M 0.793 0.95 0.95 19.56 515 1.00 0.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4adcf63-cc57-4a87-9f04-e44ee1e5cc71/@@download/cross_correlation_plot/ENCFF587HMQ-ENCFF184GOD-ENCFF787SDP-ENCFF036GMX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB854PSE bradley-bernstein:DNA_Lib 8029 "ENCFF036GMX,ENCFF587HMQ,ENCFF787SDP,ENCFF184GOD" HiSeq 2500 2016-11-15T23:55:26.962096+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bbyq00369G3Y5YPxGfb6k3 ENCSR785YRL https://www.encodeproject.org/experiments/ENCSR785YRL "transcription factor,RNA binding protein" CTCF-human neutrophil primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF522LXS https://www.encodeproject.org/files/ENCFF522LXS/@@download/ENCFF522LXS.bam ENCFF287YVX https://www.encodeproject.org/files/ENCFF287YVX/@@download/ENCFF287YVX.bam 27.3 M 0 25.7 M 0.942 SE 76 76 native 0.0 M 22.8 M 20.9 M 0.767 0.92 0.92 12.25 180 1.08 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/61df1d1c-5b0c-4077-80b0-831ca233eda8/@@download/cross_correlation_plot/ENCFF414LTY-ENCFF146LUA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB659FNH bradley-bernstein:DNA_Lib 8060 "ENCFF414LTY,ENCFF146LUA" HiSeq 2500 2016-11-14T23:56:53.684268+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0VFj03691P396yvzqp7vq ENCSR785YRL https://www.encodeproject.org/experiments/ENCSR785YRL "transcription factor,RNA binding protein" CTCF-human neutrophil primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF839WER https://www.encodeproject.org/files/ENCFF839WER/@@download/ENCFF839WER.bam ENCFF182NVZ https://www.encodeproject.org/files/ENCFF182NVZ/@@download/ENCFF182NVZ.bam 31.4 M 0 30.3 M 0.965 SE 76 76 native 0.0 M 27.0 M 24.6 M 0.783 0.91 0.92 11.88 195 1.18 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f1494a7-f2a9-4915-9bc0-2c33d1224659/@@download/cross_correlation_plot/ENCFF842MOT-ENCFF071BCK-ENCFF438UGJ-ENCFF953USV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB994JYV bradley-bernstein:DNA_Lib 8091 "ENCFF953USV,ENCFF071BCK,ENCFF842MOT,ENCFF438UGJ" HiSeq 2500 2016-11-14T23:58:15.480567+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0VXj03696kgbQ0ZfGP24V ENCSR267YXV https://www.encodeproject.org/experiments/ENCSR267YXV "histone,histone modification,narrow histone mark" H3K27ac-human neutrophil primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF810CHL https://www.encodeproject.org/files/ENCFF810CHL/@@download/ENCFF810CHL.bam ENCFF826RJY https://www.encodeproject.org/files/ENCFF826RJY/@@download/ENCFF826RJY.bam 57.3 M 0 55.3 M 0.964 SE 76 76 native 0.0 M 49.8 M 45.5 M 0.794 0.91 0.92 12.64 245 1.12 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/61d31fca-362a-468f-93b4-dd848a9dff38/@@download/cross_correlation_plot/ENCFF135DHL-ENCFF355TKV-ENCFF874HQL-ENCFF177OIN-ENCFF626POI-ENCFF554IFD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB642JUJ,ENCLB181PNQ" "bradley-bernstein:DNA_Lib 8272,bradley-bernstein:DNA_Lib 8239" "ENCFF874HQL,ENCFF626POI,ENCFF135DHL,ENCFF554IFD,ENCFF355TKV,ENCFF177OIN" HiSeq 2500 2016-11-14T23:57:56.740098+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0V7j0369BZ4kqbvjGpyXb ENCSR267YXV https://www.encodeproject.org/experiments/ENCSR267YXV "histone,histone modification,narrow histone mark" H3K27ac-human neutrophil primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF191UXI https://www.encodeproject.org/files/ENCFF191UXI/@@download/ENCFF191UXI.bam ENCFF707JPN https://www.encodeproject.org/files/ENCFF707JPN/@@download/ENCFF707JPN.bam 176.7 M 0 165.8 M 0.938 SE 76 76 native 0.0 M 152.6 M 112.1 M 0.635 0.74 0.80 6.27 200 1.17 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e1b069b-f8e4-4d32-8bc5-a2927ac5831b/@@download/cross_correlation_plot/ENCFF796DRE-ENCFF755GNZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB121LXT bradley-bernstein:DNA_Lib 8089 "ENCFF796DRE,ENCFF755GNZ" HiSeq 2500 2016-11-15T17:05:27.971600+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0VK003697qX9798yZFjBj ENCSR058FCG https://www.encodeproject.org/experiments/ENCSR058FCG "histone,histone modification,broad histone mark" H3K27me3-human neutrophil primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF517KOQ https://www.encodeproject.org/files/ENCFF517KOQ/@@download/ENCFF517KOQ.bam ENCFF236CGW https://www.encodeproject.org/files/ENCFF236CGW/@@download/ENCFF236CGW.bam 64.6 M 0 62.5 M 0.968 SE 76 76 native 0.0 M 56.0 M 50.1 M 0.776 0.89 0.89 9.33 205 1.04 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/878d8e54-762a-45de-8e31-b1e3ad5023fa/@@download/cross_correlation_plot/ENCFF208ERY-ENCFF180LSK-ENCFF723XMO-ENCFF530OIU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB830WEQ bradley-bernstein:DNA_Lib 8088 "ENCFF208ERY,ENCFF180LSK,ENCFF723XMO,ENCFF530OIU" HiSeq 2500 2016-11-14T23:55:12.554773+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0QV003698jxyvkJ65YX40 ENCSR058FCG https://www.encodeproject.org/experiments/ENCSR058FCG "histone,histone modification,broad histone mark" H3K27me3-human neutrophil primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF357NBS https://www.encodeproject.org/files/ENCFF357NBS/@@download/ENCFF357NBS.bam ENCFF156LFX https://www.encodeproject.org/files/ENCFF156LFX/@@download/ENCFF156LFX.bam 66.4 M 0 63.5 M 0.957 SE 76 76 native 0.0 M 57.1 M 51.1 M 0.770 0.90 0.90 9.42 225 1.03 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/38ee28b5-e942-4374-8d90-ab2c8e15adf0/@@download/cross_correlation_plot/ENCFF271IHZ-ENCFF530NZG-ENCFF854JBH-ENCFF997KGX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB225HSR bradley-bernstein:DNA_Lib 8044 "ENCFF854JBH,ENCFF271IHZ,ENCFF530NZG,ENCFF997KGX" HiSeq 2500 2016-11-14T23:55:36.332251+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0Qp8036956PvgkQ1KX3Vv ENCSR373WCB https://www.encodeproject.org/experiments/ENCSR373WCB "histone,histone modification,broad histone mark" H3K36me3-human neutrophil primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF167APA https://www.encodeproject.org/files/ENCFF167APA/@@download/ENCFF167APA.bam ENCFF434IEG https://www.encodeproject.org/files/ENCFF434IEG/@@download/ENCFF434IEG.bam 61.3 M 0 59.3 M 0.967 SE 76 76 native 0.0 M 52.9 M 50.8 M 0.829 0.96 0.96 27.03 280 1.00 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d93c3e4a-9522-4b43-9be1-4ef5c2150ceb/@@download/cross_correlation_plot/ENCFF394KFK-ENCFF232VYK-ENCFF175JJD-ENCFF320BQQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB889GSB bradley-bernstein:DNA_Lib 8045 "ENCFF320BQQ,ENCFF394KFK,ENCFF232VYK,ENCFF175JJD" HiSeq 2500 2016-11-14T23:55:58.536302+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2VfpKj03691gQx13xb4b1pk ENCSR373WCB https://www.encodeproject.org/experiments/ENCSR373WCB "histone,histone modification,broad histone mark" H3K36me3-human neutrophil primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF235KLZ https://www.encodeproject.org/files/ENCFF235KLZ/@@download/ENCFF235KLZ.bam ENCFF150MND https://www.encodeproject.org/files/ENCFF150MND/@@download/ENCFF150MND.bam 58.2 M 0 56.2 M 0.966 SE 76 76 native 0.0 M 50.4 M 45.7 M 0.785 0.91 0.91 10.80 205 1.05 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6119bd1-2820-4ea8-8ef3-339b2b384165/@@download/cross_correlation_plot/ENCFF038IQM-ENCFF852ZHA-ENCFF117ZCP-ENCFF764NUJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB954RWK bradley-bernstein:DNA_Lib 8090 "ENCFF764NUJ,ENCFF038IQM,ENCFF852ZHA,ENCFF117ZCP" HiSeq 2500 2017-02-15T17:19:56.715804+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2Vfpq003699pvb33x8VVv98 ENCSR826VJY https://www.encodeproject.org/experiments/ENCSR826VJY "histone,histone modification,broad histone mark" H3K4me1-human neutrophil primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF312EEN https://www.encodeproject.org/files/ENCFF312EEN/@@download/ENCFF312EEN.bam ENCFF735WXJ https://www.encodeproject.org/files/ENCFF735WXJ/@@download/ENCFF735WXJ.bam 51.9 M 0 49.4 M 0.952 SE 76 76 native 0.0 M 44.4 M 41.1 M 0.793 0.93 0.93 14.03 210 1.07 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9be79a0-d497-4aa2-b8aa-9333fc9e0da5/@@download/cross_correlation_plot/ENCFF905NXR-ENCFF124PMX-ENCFF115DWY-ENCFF711BZM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB302OUX bradley-bernstein:DNA_Lib 8087 "ENCFF905NXR,ENCFF115DWY,ENCFF124PMX,ENCFF711BZM" HiSeq 2500 2016-11-14T23:59:57.912148+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0VG003690GY00B90p79gJ ENCSR826VJY https://www.encodeproject.org/experiments/ENCSR826VJY "histone,histone modification,broad histone mark" H3K4me1-human neutrophil primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF027QAI https://www.encodeproject.org/files/ENCFF027QAI/@@download/ENCFF027QAI.bam ENCFF429WKR https://www.encodeproject.org/files/ENCFF429WKR/@@download/ENCFF429WKR.bam 59.1 M 0 57.0 M 0.965 SE 76 76 native 0.0 M 51.1 M 47.1 M 0.798 0.92 0.92 13.02 215 1.01 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/6abd0210-8531-4237-b24a-9bbc42a9a8cc/@@download/cross_correlation_plot/ENCFF466ESG-ENCFF095TVK-ENCFF160SDQ-ENCFF956YRN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB181XXV bradley-bernstein:DNA_Lib 8031 "ENCFF095TVK,ENCFF956YRN,ENCFF466ESG,ENCFF160SDQ" HiSeq 2500 2016-11-15T00:02:09.491443+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0Vf803692Jv5Yk8GgbBXv ENCSR393SYU https://www.encodeproject.org/experiments/ENCSR393SYU "histone,histone modification,narrow histone mark" H3K4me3-human neutrophil primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF287MNP https://www.encodeproject.org/files/ENCFF287MNP/@@download/ENCFF287MNP.bam ENCFF185CKR https://www.encodeproject.org/files/ENCFF185CKR/@@download/ENCFF185CKR.bam 15.9 M 0 15.3 M 0.966 SE 76 76 native 0.0 M 13.8 M 13.4 M 0.843 0.97 0.97 35.79 240 1.09 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/c545a281-1c61-4adc-b4ff-675da07a9753/@@download/cross_correlation_plot/ENCFF289JFE-ENCFF098KGS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB980MAQ bradley-bernstein:DNA_Lib 8032 "ENCFF289JFE,ENCFF098KGS" HiSeq 2500 2016-11-14T23:55:01.469252+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0Qx003696PK1PQ11Xq01V ENCSR393SYU https://www.encodeproject.org/experiments/ENCSR393SYU "histone,histone modification,narrow histone mark" H3K4me3-human neutrophil primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF751TFP https://www.encodeproject.org/files/ENCFF751TFP/@@download/ENCFF751TFP.bam ENCFF668RES https://www.encodeproject.org/files/ENCFF668RES/@@download/ENCFF668RES.bam 41.5 M 0 39.6 M 0.955 SE 76 76 native 0.0 M 35.3 M 33.7 M 0.814 0.96 0.96 24.47 210 1.16 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f86ae45-0937-4298-9797-9e40a0bbd954/@@download/cross_correlation_plot/ENCFF960QVI-ENCFF834WLD-ENCFF798QNJ-ENCFF497CHK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB474EBV bradley-bernstein:DNA_Lib 8086 "ENCFF960QVI,ENCFF798QNJ,ENCFF497CHK,ENCFF834WLD" HiSeq 2500 2016-11-14T23:56:49.750941+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0V400369BZ4kqbvjGpyXP ENCSR524RIH https://www.encodeproject.org/experiments/ENCSR524RIH "histone,histone modification,broad histone mark" H3K9me3-human neutrophil primary cell 1 bradley-bernstein ENCODE3 GRCh38 ENCFF373TAE https://www.encodeproject.org/files/ENCFF373TAE/@@download/ENCFF373TAE.bam ENCFF948OXP https://www.encodeproject.org/files/ENCFF948OXP/@@download/ENCFF948OXP.bam 66.6 M 0 62.7 M 0.941 SE 76 76 native 0.0 M 52.7 M 47.6 M 0.714 0.90 0.91 10.43 225 1.00 0.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/1befa44e-2ebe-40f1-967c-6a900f9807e9/@@download/cross_correlation_plot/ENCFF091IEK-ENCFF819MNB-ENCFF067GDW-ENCFF749MPZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB492IVZ bradley-bernstein:DNA_Lib 8036 "ENCFF091IEK,ENCFF749MPZ,ENCFF067GDW,ENCFF819MNB" HiSeq 2500 2016-11-14T23:59:11.648742+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0VG00369BZ4kqbvjGpyY3 ENCSR524RIH https://www.encodeproject.org/experiments/ENCSR524RIH "histone,histone modification,broad histone mark" H3K9me3-human neutrophil primary cell 2 bradley-bernstein ENCODE3 GRCh38 ENCFF608OIA https://www.encodeproject.org/files/ENCFF608OIA/@@download/ENCFF608OIA.bam ENCFF867GJZ https://www.encodeproject.org/files/ENCFF867GJZ/@@download/ENCFF867GJZ.bam 68.1 M 0 64.9 M 0.953 SE 76 76 native 0.0 M 54.1 M 50.6 M 0.743 0.94 0.94 16.27 205 1.01 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/387c19bc-39bd-44f4-92d9-1d8f9f80f90d/@@download/cross_correlation_plot/ENCFF203WPV-ENCFF803HBA-ENCFF194QRG-ENCFF215IGJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB653CSW bradley-bernstein:DNA_Lib 8092 "ENCFF203WPV,ENCFF194QRG,ENCFF215IGJ,ENCFF803HBA" HiSeq 2500 2016-11-14T23:58:50.018692+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b0Vf803691jKGBVGv901yg ENCSR569IIN https://www.encodeproject.org/experiments/ENCSR569IIN control Control-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF012EJM https://www.encodeproject.org/files/ENCFF012EJM/@@download/ENCFF012EJM.bam ENCFF622XQQ https://www.encodeproject.org/files/ENCFF622XQQ/@@download/ENCFF622XQQ.bam 21.1 M 0 20.6 M 0.976 SE 36 36 None 0.0 M 15.3 M 15.1 M 0.714 0.99 0.99 116.78 0 1.01 0.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/d701f85c-b50a-406a-b752-3bf9aaa20369/@@download/cross_correlation_plot/ENCFF002BBQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB299AAB bradley-bernstein:DNA_Lib 1938 ENCFF002BBQ HiSeq 2000 2016-05-06T18:09:34.760617+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqPg8036929FJGg42Xq20b ENCSR569IIN https://www.encodeproject.org/experiments/ENCSR569IIN control Control-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF474SYV https://www.encodeproject.org/files/ENCFF474SYV/@@download/ENCFF474SYV.bam ENCFF232ZFT https://www.encodeproject.org/files/ENCFF232ZFT/@@download/ENCFF232ZFT.bam 98.6 M 0 90.7 M 0.920 SE "76,36" 36 36 0.0 M 68.9 M 39.7 M 0.403 0.59 0.56 2.13 150 1.03 2.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/3846ce49-f6a3-45eb-91c7-e7d76c190152/@@download/cross_correlation_plot/ENCFF788ZCC-ENCFF536ZKX-ENCFF002BBC_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB367EFH bradley-bernstein:DNA_Lib 2959 "ENCFF788ZCC,ENCFF536ZKX,ENCFF002BBC" "HiSeq 2000,HiSeq 2500" 2016-10-14T00:34:35.467250+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzv4880369BXpF7zZK38jqj ENCSR874HSH https://www.encodeproject.org/experiments/ENCSR874HSH "histone,histone modification,narrow histone mark" H2AFZ-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF866DTA https://www.encodeproject.org/files/ENCFF866DTA/@@download/ENCFF866DTA.bam ENCFF150YXF https://www.encodeproject.org/files/ENCFF150YXF/@@download/ENCFF150YXF.bam 94.5 M 0 91.3 M 0.966 SE 36 None 0.0 M 70.7 M 58.2 M 0.616 0.85 0.86 8.05 185 1.02 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/421ae5f7-7918-419d-a9b6-224bad88736e/@@download/cross_correlation_plot/ENCFF002AYT-ENCFF002AVF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB677RRU,ENCLB947BTQ" "bradley-bernstein:DNA_Lib 4871,bradley-bernstein:DNA_Lib 5189" "ENCFF002AVF,ENCFF002AYT" HiSeq 2500 2016-06-01T18:38:56.139054+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx707kQ03696yX615GJGBy7f ENCSR874HSH https://www.encodeproject.org/experiments/ENCSR874HSH "histone,histone modification,narrow histone mark" H2AFZ-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF846HZY https://www.encodeproject.org/files/ENCFF846HZY/@@download/ENCFF846HZY.bam ENCFF068ONI https://www.encodeproject.org/files/ENCFF068ONI/@@download/ENCFF068ONI.bam 29.3 M 0 28.8 M 0.981 SE 36 None 0.0 M 22.4 M 19.5 M 0.665 0.87 0.87 7.46 195 1.02 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/57350232-5458-4cb1-b7b5-ed3fe5165924/@@download/cross_correlation_plot/ENCFF002AZY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB653TBE bradley-bernstein:DNA_Lib 5182 ENCFF002AZY HiSeq 2500 2016-06-01T18:37:53.788079+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx707v0036953VPvyQGg7v4Z ENCSR678AFU https://www.encodeproject.org/experiments/ENCSR678AFU "histone,histone modification,broad histone mark" H3F3A-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF879JKX https://www.encodeproject.org/files/ENCFF879JKX/@@download/ENCFF879JKX.bam ENCFF018NYU https://www.encodeproject.org/files/ENCFF018NYU/@@download/ENCFF018NYU.bam 47.2 M 0 45.1 M 0.955 SE 36 36 native 0.0 M 34.6 M 21.0 M 0.444 0.61 0.59 2.33 165 1.03 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/829c1f25-230d-4bca-b69d-5c33d53eea2c/@@download/cross_correlation_plot/ENCFF002AUM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB644SVP bradley-bernstein:DNA_Lib 5193 ENCFF002AUM HiSeq 2500 2016-10-10T22:43:11.982259+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzxyV7j0369Kzv5GXGzGJyKk ENCSR678AFU https://www.encodeproject.org/experiments/ENCSR678AFU "histone,histone modification,broad histone mark" H3F3A-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF979ESW https://www.encodeproject.org/files/ENCFF979ESW/@@download/ENCFF979ESW.bam ENCFF355JLS https://www.encodeproject.org/files/ENCFF355JLS/@@download/ENCFF355JLS.bam 47.7 M 0 45.8 M 0.961 SE 36 36 native 0.0 M 35.2 M 22.2 M 0.465 0.64 0.62 2.44 195 1.03 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b332141-824b-4b22-bfc9-21143cb88444/@@download/cross_correlation_plot/ENCFF002AZV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB599OTU bradley-bernstein:DNA_Lib 5186 ENCFF002AZV HiSeq 2500 2016-10-10T22:43:41.548980+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzxyVGQ0369Kzv5GXGzGJyP4 ENCSR597UDW https://www.encodeproject.org/experiments/ENCSR597UDW "histone,histone modification,narrow histone mark" H3K27ac-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF572KGX https://www.encodeproject.org/files/ENCFF572KGX/@@download/ENCFF572KGX.bam ENCFF514BPA https://www.encodeproject.org/files/ENCFF514BPA/@@download/ENCFF514BPA.bam 58.8 M 0 44.6 M 0.759 SE "38,36" 36 36 0.0 M 35.8 M 14.6 M 0.249 0.41 0.41 1.78 205 1.40 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7d3c2f9-c6fe-4b3b-ad51-3fbbc7eb2b17/@@download/cross_correlation_plot/ENCFF606DIN-ENCFF590TMQ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB563BJY bradley-bernstein:DNA_Lib 1128 "ENCFF590TMQ,ENCFF606DIN" HiSeq 2000 2016-10-13T04:12:34.516432+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzBQYj03699BKkGkVVb4Jxq ENCSR597UDW https://www.encodeproject.org/experiments/ENCSR597UDW "histone,histone modification,narrow histone mark" H3K27ac-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF241NJQ https://www.encodeproject.org/files/ENCFF241NJQ/@@download/ENCFF241NJQ.bam ENCFF912XTQ https://www.encodeproject.org/files/ENCFF912XTQ/@@download/ENCFF912XTQ.bam 28.1 M 0 27.2 M 0.966 SE 36 36 native 0.0 M 22.5 M 19.9 M 0.706 0.89 0.90 11.20 210 1.36 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecdc27a8-fd82-44b6-98f1-2ea81230cdbe/@@download/cross_correlation_plot/ENCFF002AUX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB543MQZ bradley-bernstein:DNA_Lib 3233 ENCFF002AUX HiSeq 2000 2016-10-10T22:38:35.657670+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzxyPfj03694k9q39VyfZZZq ENCSR859JNA https://www.encodeproject.org/experiments/ENCSR859JNA "histone,histone modification,broad histone mark" H3K27me3-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF503PYV https://www.encodeproject.org/files/ENCFF503PYV/@@download/ENCFF503PYV.bam ENCFF411DSG https://www.encodeproject.org/files/ENCFF411DSG/@@download/ENCFF411DSG.bam 22.1 M 0 20.6 M 0.932 SE 36 36 36 0.0 M 15.6 M 13.8 M 0.624 0.89 0.89 8.89 205 1.03 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ebc918b-7488-4fbe-97a0-ef60f3d95e2e/@@download/cross_correlation_plot/ENCFF002BBK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB128JVY bradley-bernstein:DNA_Lib 1136 ENCFF002BBK HiSeq 2000 2016-10-14T02:20:42.739111+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzxP9j03694V4kXZJPGggyG ENCSR859JNA https://www.encodeproject.org/experiments/ENCSR859JNA "histone,histone modification,broad histone mark" H3K27me3-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF401MIF https://www.encodeproject.org/files/ENCFF401MIF/@@download/ENCFF401MIF.bam ENCFF222ZFQ https://www.encodeproject.org/files/ENCFF222ZFQ/@@download/ENCFF222ZFQ.bam 46.7 M 0 43.1 M 0.924 SE 36 36 36 0.0 M 33.5 M 22.9 M 0.491 0.69 0.68 3.02 225 1.03 2.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/726ba23c-5f62-42c6-934c-c7bc798a913a/@@download/cross_correlation_plot/ENCFF637NPE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB790URK bradley-bernstein:DNA_Lib 3232 ENCFF637NPE HiSeq 2000 2016-10-14T02:22:00.046475+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzxPJ80369JZJ0xVxP4Vx02 ENCSR449AYM https://www.encodeproject.org/experiments/ENCSR449AYM "histone,histone modification,broad histone mark" H3K36me3-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF851LBS https://www.encodeproject.org/files/ENCFF851LBS/@@download/ENCFF851LBS.bam ENCFF973LYU https://www.encodeproject.org/files/ENCFF973LYU/@@download/ENCFF973LYU.bam 28.5 M 0 26.0 M 0.912 SE 36 36 native 0.0 M 17.9 M 9.8 M 0.345 0.58 0.55 2.07 190 1.07 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a234564-23fb-4b09-b3cf-9a43a0ad8e2f/@@download/cross_correlation_plot/ENCFF002BBA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB380HWY bradley-bernstein:DNA_Lib 1138 ENCFF002BBA HiSeq 2000 2016-10-10T22:45:37.384926+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzxzKZj036925p5pYQzK5FGP ENCSR449AYM https://www.encodeproject.org/experiments/ENCSR449AYM "histone,histone modification,broad histone mark" H3K36me3-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF987TVU https://www.encodeproject.org/files/ENCFF987TVU/@@download/ENCFF987TVU.bam ENCFF761HJR https://www.encodeproject.org/files/ENCFF761HJR/@@download/ENCFF761HJR.bam 69.5 M 0 66.7 M 0.961 SE "76,36" 36 36 0.0 M 50.5 M 44.6 M 0.642 0.89 0.88 8.57 210 1.03 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/763f07cf-e65e-4577-ac60-eb12af266647/@@download/cross_correlation_plot/ENCFF132PJM-ENCFF088ZWU-ENCFF002AXA_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB371EZY bradley-bernstein:DNA_Lib 3234 "ENCFF088ZWU,ENCFF132PJM,ENCFF002AXA" "HiSeq 2000,HiSeq 2500" 2016-10-14T01:06:54.313217+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzx8kQ0369Fg02vx4K4K4qJ ENCSR184QUS https://www.encodeproject.org/experiments/ENCSR184QUS "histone,histone modification,broad histone mark" H3K4me1-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF203SPZ https://www.encodeproject.org/files/ENCFF203SPZ/@@download/ENCFF203SPZ.bam ENCFF229LQB https://www.encodeproject.org/files/ENCFF229LQB/@@download/ENCFF229LQB.bam 32.3 M 0 28.9 M 0.893 SE 36 36 native 0.0 M 23.8 M 17.3 M 0.536 0.75 0.74 3.84 220 1.30 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/821799e2-b516-4e57-ab9d-1795318cfeae/@@download/cross_correlation_plot/ENCFF002AVR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB592ZSK bradley-bernstein:DNA_Lib 1125 ENCFF002AVR HiSeq 2000 2016-10-10T22:40:02.051872+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzxyQJQ03692kp4B3432f4Qv ENCSR184QUS https://www.encodeproject.org/experiments/ENCSR184QUS "histone,histone modification,broad histone mark" H3K4me1-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF694MIS https://www.encodeproject.org/files/ENCFF694MIS/@@download/ENCFF694MIS.bam ENCFF382YGW https://www.encodeproject.org/files/ENCFF382YGW/@@download/ENCFF382YGW.bam 48.8 M 0 45.3 M 0.928 SE 36 36 36 0.0 M 36.1 M 19.4 M 0.399 0.55 0.51 1.89 215 1.17 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/a177e5e7-bea6-4111-998e-95b9763171d8/@@download/cross_correlation_plot/ENCFF131DMW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB223HEF bradley-bernstein:DNA_Lib 3229 ENCFF131DMW HiSeq 2000 2016-10-14T02:24:35.363236+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzxQG0036967Y839kKzZGvX ENCSR790EDQ https://www.encodeproject.org/experiments/ENCSR790EDQ "histone,histone modification,narrow histone mark" H3K4me2-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF788GFG https://www.encodeproject.org/files/ENCFF788GFG/@@download/ENCFF788GFG.bam ENCFF865ZZT https://www.encodeproject.org/files/ENCFF865ZZT/@@download/ENCFF865ZZT.bam 42.2 M 0 40.3 M 0.955 SE 37 None 0.0 M 31.6 M 30.2 M 0.715 0.98 0.98 41.31 205 1.13 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/fbf02271-bdd3-413b-88a7-280725c44a8c/@@download/cross_correlation_plot/ENCFF002AYC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB709PBE bradley-bernstein:DNA_Lib 4849 ENCFF002AYC HiSeq 2500 2016-06-01T18:36:59.070804+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx707KQ036953VPvyQGg7v4F ENCSR790EDQ https://www.encodeproject.org/experiments/ENCSR790EDQ "histone,histone modification,narrow histone mark" H3K4me2-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF669SBF https://www.encodeproject.org/files/ENCFF669SBF/@@download/ENCFF669SBF.bam ENCFF735BNR https://www.encodeproject.org/files/ENCFF735BNR/@@download/ENCFF735BNR.bam 26.7 M 0 26.0 M 0.975 SE 36 None 0.0 M 21.7 M 20.0 M 0.752 0.93 0.93 14.83 195 1.44 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b2f4c04-ef93-47d1-964b-1d54300356bd/@@download/cross_correlation_plot/ENCFF002AVT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB261TAN bradley-bernstein:DNA_Lib 3230 ENCFF002AVT HiSeq 2000 2016-06-01T18:36:16.687278+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx707V00369Jk04b18JJJpBz ENCSR422JNY https://www.encodeproject.org/experiments/ENCSR422JNY "histone,histone modification,narrow histone mark" H3K4me3-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF164HHV https://www.encodeproject.org/files/ENCFF164HHV/@@download/ENCFF164HHV.bam ENCFF344SGS https://www.encodeproject.org/files/ENCFF344SGS/@@download/ENCFF344SGS.bam 37.7 M 0 32.0 M 0.848 SE 36 36 36 0.0 M 28.2 M 11.7 M 0.312 0.46 0.47 1.97 220 2.52 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/91930bf3-8722-4e92-abf2-2a51a62929c9/@@download/cross_correlation_plot/ENCFF002BBL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB681SUP bradley-bernstein:DNA_Lib 1137 ENCFF002BBL HiSeq 2000 2016-11-15T23:50:48.326751+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bZvZQ03691jKGBVGv908Xx ENCSR422JNY https://www.encodeproject.org/experiments/ENCSR422JNY "histone,histone modification,narrow histone mark" H3K4me3-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF073DDD https://www.encodeproject.org/files/ENCFF073DDD/@@download/ENCFF073DDD.bam ENCFF161BYG https://www.encodeproject.org/files/ENCFF161BYG/@@download/ENCFF161BYG.bam 39.6 M 0 38.3 M 0.966 SE "76,36" 36 36 0.0 M 31.8 M 26.6 M 0.671 0.84 0.86 7.77 210 1.69 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/b34c5475-e46d-4808-91d5-4626870b378c/@@download/cross_correlation_plot/ENCFF257VIO-ENCFF713VYR-ENCFF002AYK_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB499ZHY bradley-bernstein:DNA_Lib 3231 "ENCFF257VIO,ENCFF713VYR,ENCFF002AYK" "HiSeq 2000,HiSeq 2500" 2016-11-15T23:51:42.691631+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bZvk0036980Yx5QZkJk19Q ENCSR155XXB https://www.encodeproject.org/experiments/ENCSR155XXB "histone,histone modification,broad histone mark" H3K79me2-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF433MTP https://www.encodeproject.org/files/ENCFF433MTP/@@download/ENCFF433MTP.bam ENCFF849QGI https://www.encodeproject.org/files/ENCFF849QGI/@@download/ENCFF849QGI.bam 24.4 M 0 23.8 M 0.979 SE 36 36 36 0.0 M 18.7 M 17.3 M 0.708 0.96 0.96 23.16 80 1.05 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/88d9c4e9-a3fb-4e8e-ab16-7494c9c5642e/@@download/cross_correlation_plot/ENCFF264DKJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB858SVQ bradley-bernstein:DNA_Lib 4872 ENCFF264DKJ HiSeq 2500 2016-10-13T03:59:10.910662+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzBKg00369Kkp3gqxVj0GPK ENCSR155XXB https://www.encodeproject.org/experiments/ENCSR155XXB "histone,histone modification,broad histone mark" H3K79me2-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF338WAU https://www.encodeproject.org/files/ENCFF338WAU/@@download/ENCFF338WAU.bam ENCFF869DCB https://www.encodeproject.org/files/ENCFF869DCB/@@download/ENCFF869DCB.bam 37.1 M 0 35.6 M 0.960 SE 76 36 36 0.0 M 27.3 M 25.7 M 0.693 0.94 0.94 17.56 205 1.03 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bac02e4-19d2-48c3-860c-2cb8fbba3364/@@download/cross_correlation_plot/ENCFF580EKZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB048BKX bradley-bernstein:DNA_Lib 6534 ENCFF580EKZ HiSeq 2000 2016-10-13T04:10:27.345871+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzBKq0036987zXX0xXKyb1k ENCSR076JBA https://www.encodeproject.org/experiments/ENCSR076JBA "histone,histone modification,narrow histone mark" H3K9ac-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF915DGU https://www.encodeproject.org/files/ENCFF915DGU/@@download/ENCFF915DGU.bam ENCFF050UBJ https://www.encodeproject.org/files/ENCFF050UBJ/@@download/ENCFF050UBJ.bam 78.7 M 0 75.5 M 0.959 SE "37,36" None 0.0 M 59.2 M 51.6 M 0.655 0.93 0.93 14.10 200 1.07 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/30599a8a-1fb2-461a-a64a-d71fcb48fa41/@@download/cross_correlation_plot/ENCFF002BCF-ENCFF002AVE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB295YEN,ENCLB642REN" "bradley-bernstein:DNA_Lib 4870,bradley-bernstein:DNA_Lib 4850" "ENCFF002AVE,ENCFF002BCF" HiSeq 2500 2016-06-01T18:38:57.294708+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx707Z0036954PBbz8GV6jQ0 ENCSR076JBA https://www.encodeproject.org/experiments/ENCSR076JBA "histone,histone modification,narrow histone mark" H3K9ac-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF813ZLF https://www.encodeproject.org/files/ENCFF813ZLF/@@download/ENCFF813ZLF.bam ENCFF144SMY https://www.encodeproject.org/files/ENCFF144SMY/@@download/ENCFF144SMY.bam 48.7 M 0 47.5 M 0.975 SE "76,36" 36 36 0.0 M 39.3 M 32.1 M 0.659 0.82 0.83 5.98 215 1.37 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/93656dda-24bb-43b9-985a-7404c9339a01/@@download/cross_correlation_plot/ENCFF321JNQ-ENCFF404TPR-ENCFF002AYF_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB468UEO bradley-bernstein:DNA_Lib 3236 "ENCFF404TPR,ENCFF321JNQ,ENCFF002AYF" "HiSeq 2000,HiSeq 2500" 2016-10-14T01:03:33.582232+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzx73Q0369Kkp3gqxVj0QGX ENCSR768JED https://www.encodeproject.org/experiments/ENCSR768JED "histone,histone modification,broad histone mark" H3K9me2-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF670TWP https://www.encodeproject.org/files/ENCFF670TWP/@@download/ENCFF670TWP.bam ENCFF918ISL https://www.encodeproject.org/files/ENCFF918ISL/@@download/ENCFF918ISL.bam 58.5 M 0 56.7 M 0.970 SE 36 36 36 0.0 M 43.1 M 36.6 M 0.625 0.87 0.87 7.57 195 1.01 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/15f208e6-9923-44e0-89ff-ef0ff6654864/@@download/cross_correlation_plot/ENCFF823GMI-ENCFF002ADB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB540NIM,ENCLB853KNU" "bradley-bernstein:DNA_Lib 4874,bradley-bernstein:DNA_Lib 5190" "ENCFF823GMI,ENCFF002ADB" HiSeq 2500 2016-10-14T01:08:58.996531+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F183Q9Q03690xXYVJ7Fj313j ENCSR768JED https://www.encodeproject.org/experiments/ENCSR768JED "histone,histone modification,broad histone mark" H3K9me2-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF102WHV https://www.encodeproject.org/files/ENCFF102WHV/@@download/ENCFF102WHV.bam ENCFF120DKC https://www.encodeproject.org/files/ENCFF120DKC/@@download/ENCFF120DKC.bam 108.6 M 0 105.8 M 0.974 SE 76 36 36 0.0 M 80.4 M 76.5 M 0.704 0.95 0.95 21.14 0 1.01 0.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/5efb9681-742f-4a70-9090-fd7cb9da3aa7/@@download/cross_correlation_plot/ENCFF641QLP-ENCFF368OFZ-ENCFF665GSR-ENCFF828HIB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB081OPA,ENCLB703PKH" "bradley-bernstein:DNA_Lib 8027,bradley-bernstein:DNA_Lib 8028" "ENCFF665GSR,ENCFF828HIB,ENCFF641QLP,ENCFF368OFZ" HiSeq 2500 2016-10-14T01:13:43.204864+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F183QjQ03695zJkyP3F89PbY ENCSR189AGR https://www.encodeproject.org/experiments/ENCSR189AGR "histone,histone modification,broad histone mark" H3K9me3-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF449IGA https://www.encodeproject.org/files/ENCFF449IGA/@@download/ENCFF449IGA.bam ENCFF438CTV https://www.encodeproject.org/files/ENCFF438CTV/@@download/ENCFF438CTV.bam 68.9 M 0 67.0 M 0.972 SE "76,36" 36 36 0.0 M 47.7 M 45.7 M 0.662 0.97 0.97 31.70 205 1.01 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ce1e6b7-cd5e-4bc5-9cb5-83de4bc0f2f5/@@download/cross_correlation_plot/ENCFF015FHX-ENCFF149GTR-ENCFF002AVD_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB170FWB bradley-bernstein:DNA_Lib 4873 "ENCFF002AVD,ENCFF149GTR,ENCFF015FHX" HiSeq 2500 2016-10-14T01:08:41.482273+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzx9kQ03695X31FJbKv14zG ENCSR189AGR https://www.encodeproject.org/experiments/ENCSR189AGR "histone,histone modification,broad histone mark" H3K9me3-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF916JQP https://www.encodeproject.org/files/ENCFF916JQP/@@download/ENCFF916JQP.bam ENCFF565MPQ https://www.encodeproject.org/files/ENCFF565MPQ/@@download/ENCFF565MPQ.bam 89.8 M 0 87.0 M 0.970 SE 36 36 36 0.0 M 60.0 M 55.9 M 0.623 0.95 0.95 19.53 195 1.01 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/f28aaea6-fa67-48aa-838c-f9104b6ae81b/@@download/cross_correlation_plot/ENCFF005EMB-ENCFF666MJB-ENCFF002ADA_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB780YNK,ENCLB429FEJ" "bradley-bernstein:DNA_Lib 4956,bradley-bernstein:DNA_Lib 8144" "ENCFF002ADA,ENCFF666MJB,ENCFF005EMB" HiSeq 2500 2016-10-14T01:08:20.199378+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzx9x803692j0067VKgFv1v ENCSR960ZMM https://www.encodeproject.org/experiments/ENCSR960ZMM "histone,histone modification,broad histone mark" H4K20me1-human OCI-LY1 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF910RQH https://www.encodeproject.org/files/ENCFF910RQH/@@download/ENCFF910RQH.bam ENCFF469PTW https://www.encodeproject.org/files/ENCFF469PTW/@@download/ENCFF469PTW.bam 107.7 M 0 104.6 M 0.972 SE 36 36 native 0.0 M 81.1 M 69.2 M 0.643 0.87 0.87 7.66 195 1.01 0.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/de9b071b-e764-4b77-89c4-e5b460301adf/@@download/cross_correlation_plot/ENCFF614PPA-ENCFF356HOF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB285DPI,ENCLB139SLR" "bradley-bernstein:DNA_Lib 4955,bradley-bernstein:DNA_Lib 5181" "ENCFF614PPA,ENCFF356HOF" HiSeq 2500 2016-10-11T03:57:39.771605+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzxyQY003695KXVVBv34XKB5 ENCSR960ZMM https://www.encodeproject.org/experiments/ENCSR960ZMM "histone,histone modification,broad histone mark" H4K20me1-human OCI-LY1 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF197ZUR https://www.encodeproject.org/files/ENCFF197ZUR/@@download/ENCFF197ZUR.bam ENCFF226QLY https://www.encodeproject.org/files/ENCFF226QLY/@@download/ENCFF226QLY.bam 34.6 M 0 33.5 M 0.967 SE 36 36 36 0.0 M 25.8 M 25.2 M 0.727 0.98 0.98 44.56 215 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/92b5eb1d-39ff-4aac-a85c-efa444b2e26f/@@download/cross_correlation_plot/ENCFF896WSF-ENCFF349BPO-ENCFF441FWH_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB342YXO bradley-bernstein:DNA_Lib 5188 "ENCFF441FWH,ENCFF349BPO,ENCFF896WSF" HiSeq 2500 2016-10-14T02:24:48.137838+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzxV8j0369Fx9xzKkKVk538 ENCSR361GKY https://www.encodeproject.org/experiments/ENCSR361GKY control Control-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF691EEI https://www.encodeproject.org/files/ENCFF691EEI/@@download/ENCFF691EEI.bam ENCFF066FXF https://www.encodeproject.org/files/ENCFF066FXF/@@download/ENCFF066FXF.bam 29.9 M 0 29.2 M 0.978 SE 36 36 native 0.0 M 22.2 M 21.9 M 0.731 0.99 0.99 75.56 180 1.01 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/2b79e4ef-4546-4222-b562-d45179108ff7/@@download/cross_correlation_plot/ENCFF093MCZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB981KMQ bradley-bernstein:DNA_Lib 4279 ENCFF093MCZ HiSeq 2500 2016-11-03T19:46:08.113561+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0J3XPQ036983pPGVkbbXBvj ENCSR361GKY https://www.encodeproject.org/experiments/ENCSR361GKY control Control-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF212AOK https://www.encodeproject.org/files/ENCFF212AOK/@@download/ENCFF212AOK.bam ENCFF355WDB https://www.encodeproject.org/files/ENCFF355WDB/@@download/ENCFF355WDB.bam 95.4 M 0 93.7 M 0.982 SE 76 36 36 0.0 M 72.3 M 69.5 M 0.728 0.96 0.96 26.52 0 1.01 0.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9870c99-0a05-48f0-862f-e9c03d094d84/@@download/cross_correlation_plot/ENCFF890HQY-ENCFF489HIX-ENCFF475WXS-ENCFF228EQX_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB604HDA bradley-bernstein:DNA_Lib 8269 "ENCFF475WXS,ENCFF489HIX,ENCFF228EQX,ENCFF890HQY" HiSeq 2500 2016-10-25T22:01:42.032496+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07J4Vj0369FG7020ZgQxgG6 ENCSR756ZKG https://www.encodeproject.org/experiments/ENCSR756ZKG "transcription factor,RNA binding protein" CTCF-human OCI-LY3 immortalized cell line bradley-bernstein ENCODE3 pending SE 36 HiSeq 2500 pipeline completed ENCSR629TDG https://www.encodeproject.org/experiments/ENCSR629TDG "histone,histone modification,narrow histone mark" H2AFZ-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF611KCK https://www.encodeproject.org/files/ENCFF611KCK/@@download/ENCFF611KCK.bam ENCFF041VOY https://www.encodeproject.org/files/ENCFF041VOY/@@download/ENCFF041VOY.bam 35.4 M 0 34.5 M 0.975 SE 36 36 native 0.0 M 27.3 M 26.4 M 0.747 0.98 0.98 56.05 185 1.04 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/0bfbd1e6-1a56-4867-98b9-db6162b38b88/@@download/cross_correlation_plot/ENCFF002BAR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB380HOF bradley-bernstein:DNA_Lib 4865 ENCFF002BAR HiSeq 2500 2016-10-25T21:52:11.647900+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JGQ80369KX9pyqj5BPzfV ENCSR629TDG https://www.encodeproject.org/experiments/ENCSR629TDG "histone,histone modification,narrow histone mark" H2AFZ-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF760WFP https://www.encodeproject.org/files/ENCFF760WFP/@@download/ENCFF760WFP.bam ENCFF172KSF https://www.encodeproject.org/files/ENCFF172KSF/@@download/ENCFF172KSF.bam 25.3 M 0 24.0 M 0.952 SE 36 36 native 0.0 M 18.9 M 18.6 M 0.737 0.98 0.98 65.82 160 1.08 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/e61a58d3-2604-41b8-8d60-d292f6ba0668/@@download/cross_correlation_plot/ENCFF002AUA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB086LIF bradley-bernstein:DNA_Lib 4267 ENCFF002AUA HiSeq 2500 2016-10-25T21:51:29.194871+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JGZQ03690qKk7Z513jg53 ENCSR857GMX https://www.encodeproject.org/experiments/ENCSR857GMX "histone,histone modification,narrow histone mark" H3K27ac-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF988VMF https://www.encodeproject.org/files/ENCFF988VMF/@@download/ENCFF988VMF.bam ENCFF932XBB https://www.encodeproject.org/files/ENCFF932XBB/@@download/ENCFF932XBB.bam 42.1 M 0 41.0 M 0.975 SE "76,36" 36 36 0.0 M 34.1 M 27.1 M 0.643 0.85 0.88 9.68 230 1.56 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/9bfdc016-ff48-48b3-ad0e-ad85cacd84be/@@download/cross_correlation_plot/ENCFF466ICJ-ENCFF145ANA-ENCFF002BCD_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB627TJR bradley-bernstein:DNA_Lib 4856 "ENCFF466ICJ,ENCFF145ANA,ENCFF002BCD" HiSeq 2500 2016-10-26T23:32:20.203839+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08292j0369GK9p461P313Gp ENCSR857GMX https://www.encodeproject.org/experiments/ENCSR857GMX "histone,histone modification,narrow histone mark" H3K27ac-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF132KAK https://www.encodeproject.org/files/ENCFF132KAK/@@download/ENCFF132KAK.bam ENCFF418UHE https://www.encodeproject.org/files/ENCFF418UHE/@@download/ENCFF418UHE.bam 55.7 M 0 53.6 M 0.964 SE "76,36" 36 36 0.0 M 44.1 M 34.2 M 0.614 0.78 0.83 7.91 180 1.50 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a81569a-f848-408a-8aba-0ffd30f6483c/@@download/cross_correlation_plot/ENCFF810ZTW-ENCFF539JCY-ENCFF002AUE_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB083CCE bradley-bernstein:DNA_Lib 4268 "ENCFF810ZTW,ENCFF539JCY,ENCFF002AUE" HiSeq 2500 2016-10-26T23:31:45.673544+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829780369BgF5f15PFF2XK ENCSR867TPP https://www.encodeproject.org/experiments/ENCSR867TPP "histone,histone modification,broad histone mark" H3K27me3-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF818WQQ https://www.encodeproject.org/files/ENCFF818WQQ/@@download/ENCFF818WQQ.bam ENCFF490HBZ https://www.encodeproject.org/files/ENCFF490HBZ/@@download/ENCFF490HBZ.bam 56.2 M 0 54.8 M 0.975 SE "76,36" 36 36 0.0 M 43.0 M 40.2 M 0.715 0.95 0.95 21.11 190 1.02 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/415ad0fc-9f6b-41f9-9eef-49a69438fd7e/@@download/cross_correlation_plot/ENCFF969JAR-ENCFF611MCK-ENCFF002BCC_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB791ERU bradley-bernstein:DNA_Lib 4855 "ENCFF002BCC,ENCFF611MCK,ENCFF969JAR" HiSeq 2500 2016-10-26T23:24:57.533647+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082GZj0369PK6yVbxF59ZzX ENCSR867TPP https://www.encodeproject.org/experiments/ENCSR867TPP "histone,histone modification,broad histone mark" H3K27me3-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF286KFY https://www.encodeproject.org/files/ENCFF286KFY/@@download/ENCFF286KFY.bam ENCFF566XNU https://www.encodeproject.org/files/ENCFF566XNU/@@download/ENCFF566XNU.bam 85.0 M 0 81.9 M 0.964 SE "76,36" 36 36 0.0 M 63.1 M 61.2 M 0.720 0.97 0.97 32.37 170 1.02 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/48d991c0-92ef-45db-a91e-2436f47dda8e/@@download/cross_correlation_plot/ENCFF572GCB-ENCFF424BOE-ENCFF002AUD_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB190ZSO bradley-bernstein:DNA_Lib 4269 "ENCFF002AUD,ENCFF572GCB,ENCFF424BOE" HiSeq 2500 2016-10-26T23:25:22.841642+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Gk80369PK6yVbxF59Zzq ENCSR638FRE https://www.encodeproject.org/experiments/ENCSR638FRE "histone,histone modification,broad histone mark" H3K36me3-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF957DDX https://www.encodeproject.org/files/ENCFF957DDX/@@download/ENCFF957DDX.bam ENCFF852QUV https://www.encodeproject.org/files/ENCFF852QUV/@@download/ENCFF852QUV.bam 59.0 M 0 57.2 M 0.970 SE "76,36" 36 36 0.0 M 42.7 M 40.2 M 0.682 0.96 0.96 23.67 190 1.02 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e6bbd5c-46b5-44f5-a31d-371d0ec24508/@@download/cross_correlation_plot/ENCFF494PHK-ENCFF761NWK-ENCFF002BBP_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB770PIT bradley-bernstein:DNA_Lib 4857 "ENCFF494PHK,ENCFF002BBP,ENCFF761NWK" HiSeq 2500 2016-10-26T23:09:08.586717+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082JBj03693F6GvgxF23jX5 ENCSR638FRE https://www.encodeproject.org/experiments/ENCSR638FRE "histone,histone modification,broad histone mark" H3K36me3-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF496QGA https://www.encodeproject.org/files/ENCFF496QGA/@@download/ENCFF496QGA.bam ENCFF798QGV https://www.encodeproject.org/files/ENCFF798QGV/@@download/ENCFF798QGV.bam 101.1 M 0 97.8 M 0.966 SE "76,36" 36 36 0.0 M 71.0 M 68.7 M 0.679 0.97 0.97 30.55 165 1.02 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f82e7e7-0c1e-40bc-838e-681e15c903c9/@@download/cross_correlation_plot/ENCFF797VOI-ENCFF357ATC-ENCFF002ATE_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB542IVG bradley-bernstein:DNA_Lib 4270 "ENCFF357ATC,ENCFF002ATE,ENCFF797VOI" HiSeq 2500 2016-10-26T23:10:23.267367+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082JQ003691jJ0BZ9F19V83 ENCSR581LZU https://www.encodeproject.org/experiments/ENCSR581LZU "histone,histone modification,broad histone mark" H3K4me1-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF200NQZ https://www.encodeproject.org/files/ENCFF200NQZ/@@download/ENCFF200NQZ.bam ENCFF787MER https://www.encodeproject.org/files/ENCFF787MER/@@download/ENCFF787MER.bam 86.1 M 0 83.4 M 0.969 SE "76,36" 36 36 0.0 M 68.5 M 62.7 M 0.729 0.92 0.92 13.02 155 1.21 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/fedda4d2-2b78-40b3-81a3-7a845a42b205/@@download/cross_correlation_plot/ENCFF326EDN-ENCFF303JHK-ENCFF002ATF_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB936QCA bradley-bernstein:DNA_Lib 4271 "ENCFF303JHK,ENCFF002ATF,ENCFF326EDN" HiSeq 2500 2016-10-26T23:07:39.690103+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082PBQ0369BgF5f15PFF2Y6 ENCSR581LZU https://www.encodeproject.org/experiments/ENCSR581LZU "histone,histone modification,broad histone mark" H3K4me1-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF689CQK https://www.encodeproject.org/files/ENCFF689CQK/@@download/ENCFF689CQK.bam ENCFF525FXU https://www.encodeproject.org/files/ENCFF525FXU/@@download/ENCFF525FXU.bam 61.3 M 0 59.8 M 0.975 SE "76,36" 36 36 0.0 M 48.7 M 45.0 M 0.733 0.94 0.95 18.72 195 1.13 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/94c8cab4-c1cc-4098-9747-ced633828731/@@download/cross_correlation_plot/ENCFF301KQK-ENCFF126AUQ-ENCFF002BBZ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB139DMK bradley-bernstein:DNA_Lib 4852 "ENCFF002BBZ,ENCFF301KQK,ENCFF126AUQ" HiSeq 2500 2016-10-26T23:06:00.558240+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082PP80369Bj2bF0JP9JJpz ENCSR701ZDB https://www.encodeproject.org/experiments/ENCSR701ZDB "histone,histone modification,narrow histone mark" H3K4me2-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF698YAB https://www.encodeproject.org/files/ENCFF698YAB/@@download/ENCFF698YAB.bam ENCFF879ZDQ https://www.encodeproject.org/files/ENCFF879ZDQ/@@download/ENCFF879ZDQ.bam 51.2 M 0 49.5 M 0.968 SE "76,36" 36 36 0.0 M 41.1 M 37.9 M 0.740 0.92 0.93 14.27 165 1.40 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/5cf15243-4e5b-4306-966e-432f249f901d/@@download/cross_correlation_plot/ENCFF092BXV-ENCFF177FBU-ENCFF002ATG_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556LRH bradley-bernstein:DNA_Lib 4272 "ENCFF002ATG,ENCFF092BXV,ENCFF177FBU" HiSeq 2500 2016-10-26T23:30:20.135534+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829gj0369J2Pxk91P1yF75 ENCSR701ZDB https://www.encodeproject.org/experiments/ENCSR701ZDB "histone,histone modification,narrow histone mark" H3K4me2-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF192GNA https://www.encodeproject.org/files/ENCFF192GNA/@@download/ENCFF192GNA.bam ENCFF661HAN https://www.encodeproject.org/files/ENCFF661HAN/@@download/ENCFF661HAN.bam 40.1 M 0 38.9 M 0.970 SE 36 36 36 0.0 M 32.4 M 30.0 M 0.747 0.96 0.96 24.26 195 1.39 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ada5736-7210-46f8-a111-b1cccce46b03/@@download/cross_correlation_plot/ENCFF002BCI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB077QKB bradley-bernstein:DNA_Lib 4853 ENCFF002BCI HiSeq 2500 2016-10-26T23:28:13.158074+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829xQ03692404175P5Q6zV ENCSR548PZS https://www.encodeproject.org/experiments/ENCSR548PZS "histone,histone modification,narrow histone mark" H3K4me3-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF224FBU https://www.encodeproject.org/files/ENCFF224FBU/@@download/ENCFF224FBU.bam ENCFF210IZT https://www.encodeproject.org/files/ENCFF210IZT/@@download/ENCFF210IZT.bam 88.8 M 0 86.4 M 0.972 SE 36 36 native 0.0 M 71.4 M 54.7 M 0.616 0.77 0.82 7.41 175 1.57 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6325a93-ae96-4d56-862a-b393956ecac9/@@download/cross_correlation_plot/ENCFF002AZG-ENCFF002AXU-ENCFF002AWC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB452TCW,ENCLB530DKZ,ENCLB553KPF" "bradley-bernstein:DNA_Lib 4442,bradley-bernstein:DNA_Lib 4441,bradley-bernstein:DNA_Lib 4273" "ENCFF002AWC,ENCFF002AXU,ENCFF002AZG" HiSeq 2500 2016-10-25T21:57:51.682104+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JFjQ0369F6QF32GzJxQbj ENCSR548PZS https://www.encodeproject.org/experiments/ENCSR548PZS "histone,histone modification,narrow histone mark" H3K4me3-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF816RLY https://www.encodeproject.org/files/ENCFF816RLY/@@download/ENCFF816RLY.bam ENCFF978TRK https://www.encodeproject.org/files/ENCFF978TRK/@@download/ENCFF978TRK.bam 41.5 M 0 40.3 M 0.971 SE 36 36 native 0.0 M 32.8 M 29.0 M 0.701 0.93 0.94 16.38 185 1.52 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/4dc284a6-14f4-4a3b-bcae-f3a7c587de7c/@@download/cross_correlation_plot/ENCFF002BCB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB882ULO bradley-bernstein:DNA_Lib 4854 ENCFF002BCB HiSeq 2500 2016-10-25T21:52:19.262969+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07JFx803692zXjp9j3Fqp72 ENCSR957CQH https://www.encodeproject.org/experiments/ENCSR957CQH "histone,histone modification,broad histone mark" H3K79me2-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF579EMA https://www.encodeproject.org/files/ENCFF579EMA/@@download/ENCFF579EMA.bam ENCFF211BDQ https://www.encodeproject.org/files/ENCFF211BDQ/@@download/ENCFF211BDQ.bam 72.2 M 0 70.1 M 0.971 SE "76,36" 36 36 0.0 M 52.4 M 45.8 M 0.635 0.90 0.91 11.50 185 1.12 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/4507ef6a-b591-43c8-89c3-3a9e3bf32f60/@@download/cross_correlation_plot/ENCFF105EFO-ENCFF989UJZ-ENCFF002BAU_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB963NFX bradley-bernstein:DNA_Lib 4866 "ENCFF989UJZ,ENCFF002BAU,ENCFF105EFO" HiSeq 2500 2016-10-26T23:02:54.363403+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082VY003691PG1GVbF47J6z ENCSR957CQH https://www.encodeproject.org/experiments/ENCSR957CQH "histone,histone modification,broad histone mark" H3K79me2-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF740VDM https://www.encodeproject.org/files/ENCFF740VDM/@@download/ENCFF740VDM.bam ENCFF821OGE https://www.encodeproject.org/files/ENCFF821OGE/@@download/ENCFF821OGE.bam 81.4 M 0 79.2 M 0.973 SE "76,36" 36 36 0.0 M 61.2 M 57.6 M 0.708 0.94 0.95 19.42 180 1.05 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/1fb80488-f6fb-4544-a6a0-4cdabbd9d0fa/@@download/cross_correlation_plot/ENCFF950ZPL-ENCFF783BAM-ENCFF002AXT_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB995ZQU bradley-bernstein:DNA_Lib 4443 "ENCFF950ZPL,ENCFF002AXT,ENCFF783BAM" HiSeq 2500 2016-10-26T23:04:22.592717+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Vgj0369G9kV1j1K1fK51 ENCSR996GHD https://www.encodeproject.org/experiments/ENCSR996GHD "histone,histone modification,narrow histone mark" H3K9ac-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF351WHA https://www.encodeproject.org/files/ENCFF351WHA/@@download/ENCFF351WHA.bam ENCFF818FRO https://www.encodeproject.org/files/ENCFF818FRO/@@download/ENCFF818FRO.bam 33.0 M 0 32.1 M 0.972 SE 36 36 native 0.0 M 25.9 M 20.4 M 0.618 0.87 0.87 7.69 195 1.16 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/cccfc740-5eef-4e11-92ef-fc12e2f1fd38/@@download/cross_correlation_plot/ENCFF002BAS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB679MCX bradley-bernstein:DNA_Lib 4864 ENCFF002BAS HiSeq 2500 2017-01-27T00:27:18.792067+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F257g9Q03690kQ9YFZ8JbPbB ENCSR996GHD https://www.encodeproject.org/experiments/ENCSR996GHD "histone,histone modification,narrow histone mark" H3K9ac-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF673FCY https://www.encodeproject.org/files/ENCFF673FCY/@@download/ENCFF673FCY.bam ENCFF329LFU https://www.encodeproject.org/files/ENCFF329LFU/@@download/ENCFF329LFU.bam 36.1 M 0 35.1 M 0.973 SE 36 36 native 0.0 M 29.1 M 26.1 M 0.724 0.90 0.91 11.69 185 1.47 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec854def-cd53-4970-9bf7-7247cf05978b/@@download/cross_correlation_plot/ENCFF002AXW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB054JQP bradley-bernstein:DNA_Lib 4440 ENCFF002AXW HiSeq 2500 2017-01-27T00:35:12.880878+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F257gP00369G6559FZ0gBBg2 ENCSR856ACW https://www.encodeproject.org/experiments/ENCSR856ACW "histone,histone modification,broad histone mark" H3K9me2-human OCI-LY3 immortalized cell line bradley-bernstein ENCODE3 no fastqs processing ENCSR604JFH https://www.encodeproject.org/experiments/ENCSR604JFH "histone,histone modification,broad histone mark" H3K9me3-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF343XUP https://www.encodeproject.org/files/ENCFF343XUP/@@download/ENCFF343XUP.bam ENCFF626OUU https://www.encodeproject.org/files/ENCFF626OUU/@@download/ENCFF626OUU.bam 23.8 M 0 22.9 M 0.960 SE 36 36 36 0.0 M 15.1 M 14.9 M 0.625 0.99 0.99 94.16 175 1.01 0.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/abeb5785-2e88-42e4-ad7c-91f21106faa3/@@download/cross_correlation_plot/ENCFF002ATC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB662WPC bradley-bernstein:DNA_Lib 4275 ENCFF002ATC HiSeq 2500 2016-10-26T23:03:38.157040+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082PpQ03693F6GvgxF23jXz ENCSR604JFH https://www.encodeproject.org/experiments/ENCSR604JFH "histone,histone modification,broad histone mark" H3K9me3-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF843CIV https://www.encodeproject.org/files/ENCFF843CIV/@@download/ENCFF843CIV.bam ENCFF611EFY https://www.encodeproject.org/files/ENCFF611EFY/@@download/ENCFF611EFY.bam 84.4 M 0 81.9 M 0.970 SE "76,36" 36 36 0.0 M 56.6 M 54.2 M 0.642 0.97 0.97 32.56 200 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/74b0cb0c-685d-4e93-998e-84f58e04a780/@@download/cross_correlation_plot/ENCFF319VPR-ENCFF308RXF-ENCFF002BAT_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB238IOK bradley-bernstein:DNA_Lib 4867 "ENCFF308RXF,ENCFF319VPR,ENCFF002BAT" HiSeq 2500 2016-10-26T23:05:11.428399+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082PyQ03691jJ0BZ9F19V9x ENCSR779KYW https://www.encodeproject.org/experiments/ENCSR779KYW "histone,histone modification,broad histone mark" H4K20me1-human OCI-LY3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF384DKL https://www.encodeproject.org/files/ENCFF384DKL/@@download/ENCFF384DKL.bam ENCFF652IIL https://www.encodeproject.org/files/ENCFF652IIL/@@download/ENCFF652IIL.bam 67.4 M 0 65.3 M 0.968 SE "76,36" 36 36 0.0 M 50.0 M 46.7 M 0.693 0.95 0.95 21.62 185 1.02 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/fdcc48e8-b9fd-4284-8725-ddc676be33f2/@@download/cross_correlation_plot/ENCFF403SRN-ENCFF923ZCE-ENCFF568YEU_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB843OPB bradley-bernstein:DNA_Lib 4859 "ENCFF568YEU,ENCFF923ZCE,ENCFF403SRN" HiSeq 2500 2016-10-26T23:02:51.834790+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082X6j036934294qbK84J9V ENCSR779KYW https://www.encodeproject.org/experiments/ENCSR779KYW "histone,histone modification,broad histone mark" H4K20me1-human OCI-LY3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF132DEO https://www.encodeproject.org/files/ENCFF132DEO/@@download/ENCFF132DEO.bam ENCFF997RHN https://www.encodeproject.org/files/ENCFF997RHN/@@download/ENCFF997RHN.bam 45.1 M 0 44.0 M 0.975 SE "76,36" 36 36 0.0 M 33.5 M 32.4 M 0.717 0.97 0.97 30.87 165 1.02 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/cea6a66a-88a9-45ee-b139-d9d10305857e/@@download/cross_correlation_plot/ENCFF206ZHR-ENCFF259WVW-ENCFF848ZRE-ENCFF455IJP_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB547ORF bradley-bernstein:DNA_Lib 4276 "ENCFF206ZHR,ENCFF455IJP,ENCFF259WVW,ENCFF848ZRE" HiSeq 2500 2016-10-26T23:00:37.076881+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082XG003694VvqYvxK22vFV ENCSR063AUO https://www.encodeproject.org/experiments/ENCSR063AUO control Control-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF046QZN https://www.encodeproject.org/files/ENCFF046QZN/@@download/ENCFF046QZN.bam ENCFF998PVM https://www.encodeproject.org/files/ENCFF998PVM/@@download/ENCFF998PVM.bam 106.9 M 0 88.0 M 0.824 SE 36 36 None 0.0 M 66.5 M 55.0 M 0.514 0.83 0.93 15.45 180 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/7b03f7ab-68b2-4cc6-ad80-165d0003e8a9/@@download/cross_correlation_plot/ENCFF002BAA-ENCFF002AVJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB342BAX,ENCLB990HZB" "bradley-bernstein:DNA_Lib 3041,bradley-bernstein:DNA_Lib 2904" "ENCFF002AVJ,ENCFF002BAA" HiSeq 2000 2016-05-06T18:17:31.843562+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq5G8036968Bz9y02ZQ8BJ ENCSR063AUO https://www.encodeproject.org/experiments/ENCSR063AUO control Control-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF537BWA https://www.encodeproject.org/files/ENCFF537BWA/@@download/ENCFF537BWA.bam ENCFF566TWZ https://www.encodeproject.org/files/ENCFF566TWZ/@@download/ENCFF566TWZ.bam 76.0 M 0 72.2 M 0.949 SE 36 36 None 0.0 M 53.5 M 45.7 M 0.601 0.87 0.88 8.49 110 1.01 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4d5c1c0-a6b1-4fd2-8742-7e84b04308aa/@@download/cross_correlation_plot/ENCFF002BCA-ENCFF002AYG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB365DHJ,ENCLB449QWH" "bradley-bernstein:DNA_Lib 1937,bradley-bernstein:DNA_Lib 3570" "ENCFF002AYG,ENCFF002BCA" HiSeq 2000 2016-05-06T18:16:28.696874+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq5Q0036979G4ykj2bvvgg ENCSR027HML https://www.encodeproject.org/experiments/ENCSR027HML "transcription factor,RNA binding protein" CTCF-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF931HUP https://www.encodeproject.org/files/ENCFF931HUP/@@download/ENCFF931HUP.bam ENCFF357BBC https://www.encodeproject.org/files/ENCFF357BBC/@@download/ENCFF357BBC.bam 35.8 M 0 34.3 M 0.956 SE "76,36" 36 36 0.0 M 27.9 M 21.7 M 0.604 0.78 0.78 4.48 275 1.95 3.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd5b2c18-68db-4563-92ca-fcccd1cfab35/@@download/cross_correlation_plot/ENCFF266OUT-ENCFF094ZYW-ENCFF002AVL_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB506TNR bradley-bernstein:DNA_Lib 4365 "ENCFF266OUT,ENCFF094ZYW,ENCFF002AVL" HiSeq 2500 2017-02-10T16:48:51.861562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2KQ2j0036991Gg10qg67Xgp ENCSR027HML https://www.encodeproject.org/experiments/ENCSR027HML "transcription factor,RNA binding protein" CTCF-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF120JNQ https://www.encodeproject.org/files/ENCFF120JNQ/@@download/ENCFF120JNQ.bam ENCFF027YQQ https://www.encodeproject.org/files/ENCFF027YQQ/@@download/ENCFF027YQQ.bam 36.9 M 0 36.1 M 0.978 SE "76,37" 36 36 0.0 M 28.7 M 26.3 M 0.712 0.92 0.92 13.12 220 1.53 2.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/b57b83d2-44a7-4013-9d0f-450f01e1f429/@@download/cross_correlation_plot/ENCFF690GSP-ENCFF562LZL-ENCFF002AVW_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB787KKC bradley-bernstein:DNA_Lib 4490 "ENCFF002AVW,ENCFF562LZL,ENCFF690GSP" HiSeq 2500 2017-02-10T16:48:33.073550+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2KQ2xj036987kf40qvkk700 ENCSR331RGM https://www.encodeproject.org/experiments/ENCSR331RGM "histone,histone modification,narrow histone mark" H2AFZ-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF477UPE https://www.encodeproject.org/files/ENCFF477UPE/@@download/ENCFF477UPE.bam ENCFF558OZY https://www.encodeproject.org/files/ENCFF558OZY/@@download/ENCFF558OZY.bam 31.4 M 0 30.6 M 0.974 SE 36 36 native 0.0 M 24.6 M 23.6 M 0.751 0.96 0.96 23.15 300 1.10 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/dcbfd603-fe0c-4a05-9441-0a67b781c174/@@download/cross_correlation_plot/ENCFF002AWL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB010YQG bradley-bernstein:DNA_Lib 4368 ENCFF002AWL HiSeq 2500 2016-10-09T03:47:38.328483+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzvgVYj0369G69xp00g4J5jV ENCSR331RGM https://www.encodeproject.org/experiments/ENCSR331RGM "histone,histone modification,narrow histone mark" H2AFZ-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF573RAG https://www.encodeproject.org/files/ENCFF573RAG/@@download/ENCFF573RAG.bam ENCFF011AJB https://www.encodeproject.org/files/ENCFF011AJB/@@download/ENCFF011AJB.bam 35.3 M 0 34.2 M 0.968 SE 37 37 native 0.0 M 27.0 M 20.8 M 0.590 0.87 0.86 7.18 195 1.04 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/dae4b779-a1a8-4054-a81c-bcb7f6a0a186/@@download/cross_correlation_plot/ENCFF002AYY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB072LQM bradley-bernstein:DNA_Lib 4788 ENCFF002AYY HiSeq 2500 2016-10-09T03:49:58.193449+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzvgVg0036956Q2yZ51Zb769 ENCSR447ZGY https://www.encodeproject.org/experiments/ENCSR447ZGY "histone,histone modification,narrow histone mark" H3K27ac-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF204UGN https://www.encodeproject.org/files/ENCFF204UGN/@@download/ENCFF204UGN.bam ENCFF576WPY https://www.encodeproject.org/files/ENCFF576WPY/@@download/ENCFF576WPY.bam 63.4 M 0 59.5 M 0.939 SE "38,36" 36 native 0.0 M 50.2 M 17.3 M 0.273 0.53 0.53 2.15 220 1.57 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/1992bbd7-dd72-417d-86ce-4ae37e6a09e1/@@download/cross_correlation_plot/ENCFF822DBR-ENCFF558WXW-ENCFF524KGJ-ENCFF002BBG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB195ELU bradley-bernstein:DNA_Lib 1132 "ENCFF524KGJ,ENCFF558WXW,ENCFF822DBR,ENCFF002BBG" "HiSeq 2000,Illumina NextSeq 500" 2016-12-05T19:15:45.263939+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10z7Yj03692j6fv5JVX2Z2J ENCSR447ZGY https://www.encodeproject.org/experiments/ENCSR447ZGY "histone,histone modification,narrow histone mark" H3K27ac-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF489RAL https://www.encodeproject.org/files/ENCFF489RAL/@@download/ENCFF489RAL.bam ENCFF058PMH https://www.encodeproject.org/files/ENCFF058PMH/@@download/ENCFF058PMH.bam 31.8 M 0 27.9 M 0.879 SE 36 36 native 0.0 M 22.7 M 17.3 M 0.544 0.79 0.80 5.19 190 1.49 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0dc91c7-f7f9-4681-a7cd-a91cf0ac271d/@@download/cross_correlation_plot/ENCFF002ATK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB868KJZ bradley-bernstein:DNA_Lib 3225 ENCFF002ATK HiSeq 2000 2016-08-09T15:14:07.293762+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10z7k00369JgpfJ7bkvBKvQ ENCSR752KQT https://www.encodeproject.org/experiments/ENCSR752KQT "histone,histone modification,broad histone mark" H3K27me3-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF171DJL https://www.encodeproject.org/files/ENCFF171DJL/@@download/ENCFF171DJL.bam ENCFF841GNX https://www.encodeproject.org/files/ENCFF841GNX/@@download/ENCFF841GNX.bam 54.7 M 0 50.7 M 0.927 SE 36 36 native 0.0 M 39.1 M 12.6 M 0.230 0.35 0.34 1.72 205 1.05 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d4b771a-345c-4be2-9963-c4a6a7770cb9/@@download/cross_correlation_plot/ENCFF002BBH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB362DZN bradley-bernstein:DNA_Lib 1133 ENCFF002BBH HiSeq 2000 2016-08-09T15:14:24.543362+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQ5gQ0369K54J608p06XqB ENCSR752KQT https://www.encodeproject.org/experiments/ENCSR752KQT "histone,histone modification,broad histone mark" H3K27me3-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF992ONM https://www.encodeproject.org/files/ENCFF992ONM/@@download/ENCFF992ONM.bam ENCFF659NMK https://www.encodeproject.org/files/ENCFF659NMK/@@download/ENCFF659NMK.bam 32.0 M 0 31.1 M 0.973 SE 36 36 native 0.0 M 25.1 M 18.4 M 0.575 0.84 0.84 6.11 175 1.03 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ba5c473-d77a-40dd-a8f6-602161bbfdcb/@@download/cross_correlation_plot/ENCFF002AYP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB440CWP bradley-bernstein:DNA_Lib 4733 ENCFF002AYP HiSeq 2500 2016-08-09T15:14:01.104348+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQ5qQ0369Gv2g4zGkqb7ZZ ENCSR243AIS https://www.encodeproject.org/experiments/ENCSR243AIS "histone,histone modification,broad histone mark" H3K36me3-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF528LYA https://www.encodeproject.org/files/ENCFF528LYA/@@download/ENCFF528LYA.bam ENCFF472MSV https://www.encodeproject.org/files/ENCFF472MSV/@@download/ENCFF472MSV.bam 86.8 M 0 80.9 M 0.932 SE "76,36" 36 36 0.0 M 60.7 M 53.5 M 0.617 0.89 0.89 8.81 185 1.03 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6f9fc7a-db02-4975-b0d7-36f4460446f1/@@download/cross_correlation_plot/ENCFF761GUL-ENCFF028MIM-ENCFF002ATL_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB769IJW bradley-bernstein:DNA_Lib 3222 "ENCFF002ATL,ENCFF028MIM,ENCFF761GUL" "HiSeq 2000,HiSeq 2500" 2016-10-14T00:31:10.155474+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzq4xj03699BKkGkVVb4Vj0 ENCSR243AIS https://www.encodeproject.org/experiments/ENCSR243AIS "histone,histone modification,broad histone mark" H3K36me3-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF253MNA https://www.encodeproject.org/files/ENCFF253MNA/@@download/ENCFF253MNA.bam ENCFF033KYZ https://www.encodeproject.org/files/ENCFF033KYZ/@@download/ENCFF033KYZ.bam 30.7 M 0 27.1 M 0.883 SE 36 36 native 0.0 M 19.8 M 10.7 M 0.350 0.57 0.55 2.13 190 1.08 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8584d5d-5259-4152-ac82-5523d37198d0/@@download/cross_correlation_plot/ENCFF002ACU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB942TTE bradley-bernstein:DNA_Lib 1135 ENCFF002ACU HiSeq 2000 2017-01-30T17:39:40.905147+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27fPqj036916F1fJ0XbGGq1 ENCSR060WGK https://www.encodeproject.org/experiments/ENCSR060WGK "histone,histone modification,broad histone mark" H3K4me1-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF248LZI https://www.encodeproject.org/files/ENCFF248LZI/@@download/ENCFF248LZI.bam ENCFF858OPW https://www.encodeproject.org/files/ENCFF858OPW/@@download/ENCFF858OPW.bam 50.9 M 0 46.8 M 0.919 SE 36 36 native 0.0 M 38.3 M 6.1 M 0.119 0.19 0.24 2.65 195 1.29 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/289d643e-aff2-44bd-a082-66556e35894b/@@download/cross_correlation_plot/ENCFF002AXO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB662SQM bradley-bernstein:DNA_Lib 1129 ENCFF002AXO HiSeq 2000 2016-08-09T15:13:58.881933+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQ5VQ03696X3GV84f285qY ENCSR060WGK https://www.encodeproject.org/experiments/ENCSR060WGK "histone,histone modification,broad histone mark" H3K4me1-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF709OXE https://www.encodeproject.org/files/ENCFF709OXE/@@download/ENCFF709OXE.bam ENCFF931HLD https://www.encodeproject.org/files/ENCFF931HLD/@@download/ENCFF931HLD.bam 31.1 M 0 28.3 M 0.911 SE 36 36 native 0.0 M 22.5 M 21.0 M 0.675 0.94 0.94 17.33 190 1.18 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bc84909-007a-497e-8e48-5d1ff06970cb/@@download/cross_correlation_plot/ENCFF002ATJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB390FDV bradley-bernstein:DNA_Lib 3224 ENCFF002ATJ HiSeq 2000 2016-08-09T15:14:22.128960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZQ5Yj036959Yx5v8kq43G5 ENCSR850QKN https://www.encodeproject.org/experiments/ENCSR850QKN "histone,histone modification,narrow histone mark" H3K4me2-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF051QON https://www.encodeproject.org/files/ENCFF051QON/@@download/ENCFF051QON.bam ENCFF896ODZ https://www.encodeproject.org/files/ENCFF896ODZ/@@download/ENCFF896ODZ.bam 36.8 M 0 33.6 M 0.912 SE 36 36 native 0.0 M 27.5 M 25.3 M 0.688 0.93 0.93 15.31 185 1.34 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cd93ba6-be03-4b96-92db-25bfadbdfb5c/@@download/cross_correlation_plot/ENCFF947IMN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB316PFB bradley-bernstein:DNA_Lib 3221 ENCFF947IMN HiSeq 2000 2016-08-09T16:52:27.625258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV32j03691pg08JG2g7kkG ENCSR850QKN https://www.encodeproject.org/experiments/ENCSR850QKN "histone,histone modification,narrow histone mark" H3K4me2-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF418TZJ https://www.encodeproject.org/files/ENCFF418TZJ/@@download/ENCFF418TZJ.bam ENCFF431FLK https://www.encodeproject.org/files/ENCFF431FLK/@@download/ENCFF431FLK.bam 28.8 M 0 28.3 M 0.983 SE 36 None 0.0 M 23.1 M 19.4 M 0.675 0.85 0.85 6.55 205 1.20 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e1b33a7-cd32-4b6c-8f2c-de38afe74bf2/@@download/cross_correlation_plot/ENCFF002ASY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB834XGE bradley-bernstein:DNA_Lib 3014 ENCFF002ASY HiSeq 2000 2016-06-14T05:40:07.774595+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPZv300369By4qQ0GQV5k3Y ENCSR005SXO https://www.encodeproject.org/experiments/ENCSR005SXO "histone,histone modification,narrow histone mark" H3K4me3-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF186RJW https://www.encodeproject.org/files/ENCFF186RJW/@@download/ENCFF186RJW.bam ENCFF652YXB https://www.encodeproject.org/files/ENCFF652YXB/@@download/ENCFF652YXB.bam 33.8 M 0 31.4 M 0.931 SE 36 None 0.0 M 25.1 M 22.4 M 0.663 0.91 0.91 11.76 190 1.50 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/6dd5b29d-b5be-4fd3-9aaa-7677ed625c62/@@download/cross_correlation_plot/ENCFF002ATI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB173GMJ bradley-bernstein:DNA_Lib 3226 ENCFF002ATI HiSeq 2000 2016-06-14T05:33:36.953684+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPbxy00369By4qQ0GQV5kV5 ENCSR005SXO https://www.encodeproject.org/experiments/ENCSR005SXO "histone,histone modification,narrow histone mark" H3K4me3-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF142SUT https://www.encodeproject.org/files/ENCFF142SUT/@@download/ENCFF142SUT.bam ENCFF135RHY https://www.encodeproject.org/files/ENCFF135RHY/@@download/ENCFF135RHY.bam 51.1 M 0 43.4 M 0.848 SE 36 None 0.0 M 37.9 M 17.3 M 0.338 0.50 0.52 2.22 220 2.19 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/50046891-05e3-4758-b3cf-c840628b6665/@@download/cross_correlation_plot/ENCFF002BBI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB538YXG bradley-bernstein:DNA_Lib 1134 ENCFF002BBI HiSeq 2000 2016-06-14T05:33:14.404074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxPbxzj0369GzZgFyQQ2Gfbq ENCSR347DAG https://www.encodeproject.org/experiments/ENCSR347DAG "histone,histone modification,broad histone mark" H3K79me2-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF054FUY https://www.encodeproject.org/files/ENCFF054FUY/@@download/ENCFF054FUY.bam ENCFF347FJL https://www.encodeproject.org/files/ENCFF347FJL/@@download/ENCFF347FJL.bam 64.9 M 0 62.7 M 0.967 SE "76,36" 36 36 0.0 M 49.8 M 33.9 M 0.523 0.68 0.67 2.88 0 1.07 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/903f1972-be01-450e-b7d3-cd676e9c81e5/@@download/cross_correlation_plot/ENCFF329XAM-ENCFF378SRX-ENCFF701KZQ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB285RFC bradley-bernstein:DNA_Lib 4369 "ENCFF701KZQ,ENCFF378SRX,ENCFF329XAM" HiSeq 2500 2016-10-14T00:26:35.435247+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzq40Q036967Y839kKzZFfK ENCSR347DAG https://www.encodeproject.org/experiments/ENCSR347DAG "histone,histone modification,broad histone mark" H3K79me2-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF499ZJJ https://www.encodeproject.org/files/ENCFF499ZJJ/@@download/ENCFF499ZJJ.bam ENCFF727UEQ https://www.encodeproject.org/files/ENCFF727UEQ/@@download/ENCFF727UEQ.bam 34.6 M 0 34.0 M 0.983 SE 36 36 native 0.0 M 26.4 M 16.2 M 0.467 0.63 0.61 2.47 190 1.03 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/47341d5f-6228-4cfc-ab07-94818194e575/@@download/cross_correlation_plot/ENCFF399RVX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB247DHE bradley-bernstein:DNA_Lib 3019 ENCFF399RVX HiSeq 2000 2016-10-26T19:27:18.924873+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08JJGQ0369GJ6xQfbB7Byv5 ENCSR660IQK https://www.encodeproject.org/experiments/ENCSR660IQK "histone,histone modification,narrow histone mark" H3K9ac-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF710GFR https://www.encodeproject.org/files/ENCFF710GFR/@@download/ENCFF710GFR.bam ENCFF975LJD https://www.encodeproject.org/files/ENCFF975LJD/@@download/ENCFF975LJD.bam 28.4 M 0 27.3 M 0.962 SE 36 36 native 0.0 M 22.7 M 20.4 M 0.720 0.90 0.90 10.46 300 1.31 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/b06367ec-e57f-47a0-8a76-cd1143bf5ab9/@@download/cross_correlation_plot/ENCFF002AWD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB140DDW bradley-bernstein:DNA_Lib 4366 ENCFF002AWD HiSeq 2500 2016-10-26T19:26:52.322580+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08JFjQ03691PG1GVbF47V3Z ENCSR660IQK https://www.encodeproject.org/experiments/ENCSR660IQK "histone,histone modification,narrow histone mark" H3K9ac-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF319BSM https://www.encodeproject.org/files/ENCFF319BSM/@@download/ENCFF319BSM.bam ENCFF767GPS https://www.encodeproject.org/files/ENCFF767GPS/@@download/ENCFF767GPS.bam 25.1 M 0 24.6 M 0.978 SE 36 36 native 0.0 M 20.4 M 4.3 M 0.172 0.23 0.28 2.01 290 1.64 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/0aac2791-1758-4b8b-bc44-fb0e1e6115d9/@@download/cross_correlation_plot/ENCFF002AXF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB777QHN bradley-bernstein:DNA_Lib 3017 ENCFF002AXF HiSeq 2000 2016-10-26T19:27:12.782278+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08JFqj0369BX1xqb1B80J00 ENCSR199KHR https://www.encodeproject.org/experiments/ENCSR199KHR "histone,histone modification,broad histone mark" H3K9me2-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF964VKO https://www.encodeproject.org/files/ENCFF964VKO/@@download/ENCFF964VKO.bam ENCFF427KAE https://www.encodeproject.org/files/ENCFF427KAE/@@download/ENCFF427KAE.bam 86.2 M 0 83.5 M 0.968 SE "76,37" 36 36 0.0 M 64.0 M 58.8 M 0.683 0.92 0.92 12.17 200 1.01 0.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/7737193d-5275-437e-bdda-5b1857e7a0c1/@@download/cross_correlation_plot/ENCFF351KFK-ENCFF506VIB-ENCFF935JYR_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB576ISW bradley-bernstein:DNA_Lib 4492 "ENCFF351KFK,ENCFF935JYR,ENCFF506VIB" HiSeq 2500 2016-10-14T00:29:45.478747+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzq4B803692KBqKFQQB92B1 ENCSR199KHR https://www.encodeproject.org/experiments/ENCSR199KHR "histone,histone modification,broad histone mark" H3K9me2-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF427SFL https://www.encodeproject.org/files/ENCFF427SFL/@@download/ENCFF427SFL.bam ENCFF860YBA https://www.encodeproject.org/files/ENCFF860YBA/@@download/ENCFF860YBA.bam 27.6 M 0 26.5 M 0.962 SE 36 36 36 0.0 M 20.8 M 18.4 M 0.667 0.89 0.88 8.44 205 1.01 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1cef385-0238-4613-925a-66c3d3665d50/@@download/cross_correlation_plot/ENCFF991PXG-ENCFF518FAY_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB428SHK bradley-bernstein:DNA_Lib 4371 "ENCFF991PXG,ENCFF518FAY" HiSeq 2500 2016-10-14T00:27:13.410005+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzq4JQ03693Zkj8VvJVpv4G ENCSR389WWC https://www.encodeproject.org/experiments/ENCSR389WWC "histone,histone modification,broad histone mark" H3K9me3-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF666ZSF https://www.encodeproject.org/files/ENCFF666ZSF/@@download/ENCFF666ZSF.bam ENCFF154PBH https://www.encodeproject.org/files/ENCFF154PBH/@@download/ENCFF154PBH.bam 66.0 M 0 64.1 M 0.970 SE "76,36" 36 36 0.0 M 43.1 M 38.7 M 0.585 0.90 0.90 9.46 195 1.01 0.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/2b89975d-1ee9-4fd4-afe1-2205ea14a146/@@download/cross_correlation_plot/ENCFF620NTV-ENCFF102XKJ-ENCFF002AST_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB822NPD bradley-bernstein:DNA_Lib 4370 "ENCFF002AST,ENCFF620NTV,ENCFF102XKJ" HiSeq 2500 2016-10-13T04:10:36.256142+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzBK1803690YbYZqjK5pkpJ ENCSR389WWC https://www.encodeproject.org/experiments/ENCSR389WWC "histone,histone modification,broad histone mark" H3K9me3-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF044BRZ https://www.encodeproject.org/files/ENCFF044BRZ/@@download/ENCFF044BRZ.bam ENCFF272CZU https://www.encodeproject.org/files/ENCFF272CZU/@@download/ENCFF272CZU.bam 68.3 M 0 66.4 M 0.973 SE "76,37,36" 36 36 0.0 M 46.9 M 44.2 M 0.647 0.94 0.94 17.37 220 1.01 0.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/0bc0703c-1398-4348-ad04-bf06adf46f94/@@download/cross_correlation_plot/ENCFF342JGY-ENCFF967RFK-ENCFF860GLQ-ENCFF856MGI_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB361JAZ bradley-bernstein:DNA_Lib 4491 "ENCFF860GLQ,ENCFF967RFK,ENCFF342JGY,ENCFF856MGI" HiSeq 2500 2016-10-13T04:00:16.043682+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzzBK700369Fp626jjKB57kQ ENCSR747ZDF https://www.encodeproject.org/experiments/ENCSR747ZDF "histone,histone modification,broad histone mark" H4K20me1-human OCI-LY7 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF480VXQ https://www.encodeproject.org/files/ENCFF480VXQ/@@download/ENCFF480VXQ.bam ENCFF398VEH https://www.encodeproject.org/files/ENCFF398VEH/@@download/ENCFF398VEH.bam 61.7 M 0 59.8 M 0.970 SE "76,36" 36 36 0.0 M 46.8 M 44.5 M 0.721 0.95 0.95 20.19 255 1.01 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/098a5e4b-04dc-4a34-be9c-b804d25962ab/@@download/cross_correlation_plot/ENCFF350ZIU-ENCFF070BFI-ENCFF002AVI_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB965RWV bradley-bernstein:DNA_Lib 4367 "ENCFF350ZIU,ENCFF002AVI,ENCFF070BFI" HiSeq 2500 2016-10-14T00:24:48.352111+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzzq33j0369KPK0fF5f4KkJk ENCSR747ZDF https://www.encodeproject.org/experiments/ENCSR747ZDF "histone,histone modification,broad histone mark" H4K20me1-human OCI-LY7 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF732UNE https://www.encodeproject.org/files/ENCFF732UNE/@@download/ENCFF732UNE.bam ENCFF740LRN https://www.encodeproject.org/files/ENCFF740LRN/@@download/ENCFF740LRN.bam 37.5 M 0 32.1 M 0.855 SE 36 36 native 0.0 M 24.9 M 18.1 M 0.482 0.76 0.75 3.91 180 1.04 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4e29296-088a-42f7-84d5-0d2786d20425/@@download/cross_correlation_plot/ENCFF002ATM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB242PNW bradley-bernstein:DNA_Lib 3223 ENCFF002ATM HiSeq 2000 2016-10-26T19:26:52.893056+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08JJ2Q03691b327zxKB847b ENCSR968GYD https://www.encodeproject.org/experiments/ENCSR968GYD control Control-human omental fat pad tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF352KCS https://www.encodeproject.org/files/ENCFF352KCS/@@download/ENCFF352KCS.bam ENCFF105EYC https://www.encodeproject.org/files/ENCFF105EYC/@@download/ENCFF105EYC.bam 68.1 M 0 66.0 M 0.969 SE 76 76 native 0.0 M 58.6 M 55.7 M 0.817 0.95 0.95 21.55 440 1.00 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d5986eb-7770-45fe-afce-5eec49152921/@@download/cross_correlation_plot/ENCFF620XGN-ENCFF075YVC-ENCFF649ZVW-ENCFF142NKQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB331IQP bradley-bernstein:DNA_Lib 8237 "ENCFF142NKQ,ENCFF075YVC,ENCFF649ZVW,ENCFF620XGN" HiSeq 2500 2016-10-27T22:04:42.506217+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091V400369PK6yVbxF5B9G5 ENCSR000APU https://www.encodeproject.org/experiments/ENCSR000APU control Control-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF699UTE https://www.encodeproject.org/files/ENCFF699UTE/@@download/ENCFF699UTE.bam ENCFF076RWI https://www.encodeproject.org/files/ENCFF076RWI/@@download/ENCFF076RWI.bam 29.7 M 0 17.6 M 0.593 SE 36 36 native 0.0 M 11.9 M 11.5 M 0.388 0.98 0.98 50.47 175 1.01 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/963acd28-63cf-4244-8319-47e3d7b5338e/@@download/cross_correlation_plot/ENCFF000CUZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHU ENCFF000CUZ Illumina Genome Analyzer II 2016-08-09T15:58:36.718757+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYFjj03696BF6v1Q3BGK6G ENCSR000APU https://www.encodeproject.org/experiments/ENCSR000APU control Control-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF535QXZ https://www.encodeproject.org/files/ENCFF535QXZ/@@download/ENCFF535QXZ.bam ENCFF917GFZ https://www.encodeproject.org/files/ENCFF917GFZ/@@download/ENCFF917GFZ.bam 39.0 M 0 38.5 M 0.987 SE 36 36 native 0.0 M 29.6 M 27.4 M 0.702 0.93 0.93 14.22 95 1.02 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a1ff258-07b7-4588-ae71-3877ff23ce36/@@download/cross_correlation_plot/ENCFF000CVB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHT ENCFF000CVB Illumina Genome Analyzer II 2016-08-09T15:59:23.396218+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYFq80369J0Bzfkv2XyxFb ENCSR000APF https://www.encodeproject.org/experiments/ENCSR000APF "transcription factor,RNA binding protein" CTCF-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF299JTX https://www.encodeproject.org/files/ENCFF299JTX/@@download/ENCFF299JTX.bam ENCFF794KKR https://www.encodeproject.org/files/ENCFF794KKR/@@download/ENCFF794KKR.bam 20.1 M 0 6.3 M 0.312 SE 36 36 native 0.0 M 3.6 M 3.1 M 0.153 0.86 0.86 6.97 230 3.47 4.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/df82ec8a-661b-4df5-a12b-6ea260d887c3/@@download/cross_correlation_plot/ENCFF000CVG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGT ENCFF000CVG Illumina Genome Analyzer IIe 2016-12-11T04:42:03.173862+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1664bj0369GF0YB1zjPf75V ENCSR000APF https://www.encodeproject.org/experiments/ENCSR000APF "transcription factor,RNA binding protein" CTCF-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF803JSH https://www.encodeproject.org/files/ENCFF803JSH/@@download/ENCFF803JSH.bam ENCFF556NVM https://www.encodeproject.org/files/ENCFF556NVM/@@download/ENCFF556NVM.bam 38.1 M 0 32.5 M 0.852 SE 36 36 native 0.0 M 26.7 M 14.8 M 0.389 0.58 0.56 2.16 165 3.37 2.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6189b6d-1d73-49b9-949f-b84659f31d1e/@@download/cross_correlation_plot/ENCFF000CVF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AGS ENCFF000CVF Illumina Genome Analyzer IIx 2016-12-11T04:57:02.114229+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1664q00369PvYp91zK1PxgV ENCSR000APG https://www.encodeproject.org/experiments/ENCSR000APG "histone,histone modification,narrow histone mark" H2AFZ-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF900VNN https://www.encodeproject.org/files/ENCFF900VNN/@@download/ENCFF900VNN.bam ENCFF741VNK https://www.encodeproject.org/files/ENCFF741VNK/@@download/ENCFF741VNK.bam 39.0 M 0 33.9 M 0.870 SE 36 36 native 0.0 M 26.7 M 24.6 M 0.631 0.93 0.93 13.95 150 1.17 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bc1cf34-7e6f-4062-8f80-9d3dff095d35/@@download/cross_correlation_plot/ENCFF000CVL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEQ ENCFF000CVL Illumina Genome Analyzer IIx 2016-11-11T15:28:51.085435+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfzKQ036945pqjGJ4QpPYV ENCSR000APG https://www.encodeproject.org/experiments/ENCSR000APG "histone,histone modification,narrow histone mark" H2AFZ-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF264FWL https://www.encodeproject.org/files/ENCFF264FWL/@@download/ENCFF264FWL.bam ENCFF386KDX https://www.encodeproject.org/files/ENCFF386KDX/@@download/ENCFF386KDX.bam 36.2 M 0 33.2 M 0.918 SE 36 36 native 0.0 M 26.0 M 21.5 M 0.593 0.84 0.85 6.97 170 1.09 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/0cd072b5-9c95-4f00-bbee-efe830c38661/@@download/cross_correlation_plot/ENCFF000CVM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEP ENCFF000CVM Illumina Genome Analyzer IIx 2016-11-11T15:28:21.339180+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfzXj03698k9bbVGJ8yfjj ENCSR000APH https://www.encodeproject.org/experiments/ENCSR000APH "histone,histone modification,narrow histone mark" H3K27ac-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF835QFJ https://www.encodeproject.org/files/ENCFF835QFJ/@@download/ENCFF835QFJ.bam ENCFF900OOT https://www.encodeproject.org/files/ENCFF900OOT/@@download/ENCFF900OOT.bam 26.8 M 0 17.7 M 0.662 SE 36 36 native 0.0 M 14.0 M 10.7 M 0.400 0.77 0.77 4.31 245 1.64 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/f84480e6-5502-460a-9479-4c676ddd39f6/@@download/cross_correlation_plot/ENCFF000CVS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFY ENCFF000CVS Illumina Genome Analyzer IIe 2016-08-09T15:58:38.845512+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY9j00369K6bQZG82k0kBJ ENCSR000APH https://www.encodeproject.org/experiments/ENCSR000APH "histone,histone modification,narrow histone mark" H3K27ac-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF155WZC https://www.encodeproject.org/files/ENCFF155WZC/@@download/ENCFF155WZC.bam ENCFF284EFV https://www.encodeproject.org/files/ENCFF284EFV/@@download/ENCFF284EFV.bam 43.9 M 0 40.8 M 0.929 SE 36 36 native 0.0 M 33.3 M 28.6 M 0.652 0.87 0.87 7.59 175 1.15 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/379875dd-05e4-4c45-a535-b0c7b9f80411/@@download/cross_correlation_plot/ENCFF000CVU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AFX ENCFF000CVU Illumina Genome Analyzer IIx 2016-08-09T16:00:04.671744+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY9pQ0369F2Bb9zQ2bqjYB ENCSR000AQS https://www.encodeproject.org/experiments/ENCSR000AQS "histone,histone modification,broad histone mark" H3K27me3-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF318IMH https://www.encodeproject.org/files/ENCFF318IMH/@@download/ENCFF318IMH.bam ENCFF487VZY https://www.encodeproject.org/files/ENCFF487VZY/@@download/ENCFF487VZY.bam 13.0 M 0 11.0 M 0.844 SE 36 36 native 0.0 M 8.2 M 5.8 M 0.448 0.72 0.71 3.37 170 1.05 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/571058d0-8e7b-4296-9e77-ce7d7cb9e835/@@download/cross_correlation_plot/ENCFF000CUA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AEV ENCFF000CUA Illumina Genome Analyzer IIe 2016-11-11T15:27:41.311008+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfyGQ0369PBFF2z0Pk0Bv6 ENCSR000AQS https://www.encodeproject.org/experiments/ENCSR000AQS "histone,histone modification,broad histone mark" H3K27me3-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF798RLD https://www.encodeproject.org/files/ENCFF798RLD/@@download/ENCFF798RLD.bam ENCFF539NBY https://www.encodeproject.org/files/ENCFF539NBY/@@download/ENCFF539NBY.bam 37.5 M 0 36.9 M 0.983 SE 36 36 native 0.0 M 29.0 M 24.2 M 0.645 0.84 0.84 6.03 150 1.03 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/90ec0ce2-540d-4fa2-ac29-fa91b3164609/@@download/cross_correlation_plot/ENCFF000CUF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVY ENCFF000CUF Illumina Genome Analyzer 2016-11-11T15:28:56.450166+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfyV00369BV37kpGJfBKJx ENCSR000API https://www.encodeproject.org/experiments/ENCSR000API "histone,histone modification,broad histone mark" H3K36me3-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF842UFI https://www.encodeproject.org/files/ENCFF842UFI/@@download/ENCFF842UFI.bam ENCFF637JTU https://www.encodeproject.org/files/ENCFF637JTU/@@download/ENCFF637JTU.bam 24.2 M 0 14.2 M 0.588 SE 36 36 native 0.0 M 9.5 M 9.1 M 0.376 0.95 0.96 22.37 200 1.03 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/9867a24b-4d58-4015-b13d-cd25c73a4634/@@download/cross_correlation_plot/ENCFF000CVY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABM ENCFF000CVY Illumina Genome Analyzer II 2016-11-11T15:32:31.619511+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfZ6803697B6KjJ0vkYj70 ENCSR000API https://www.encodeproject.org/experiments/ENCSR000API "histone,histone modification,broad histone mark" H3K36me3-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF141KCU https://www.encodeproject.org/files/ENCFF141KCU/@@download/ENCFF141KCU.bam ENCFF089WPI https://www.encodeproject.org/files/ENCFF089WPI/@@download/ENCFF089WPI.bam 40.3 M 0 37.7 M 0.936 SE 36 36 native 0.0 M 28.2 M 21.4 M 0.531 0.77 0.77 4.11 180 1.04 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1d81d86-cf32-4b25-9b9a-b51715f63198/@@download/cross_correlation_plot/ENCFF000CWB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABL ENCFF000CWB Illumina Genome Analyzer II 2016-11-11T15:33:15.489657+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfZJQ036945pqjGJ4QpPQX ENCSR000APJ https://www.encodeproject.org/experiments/ENCSR000APJ "histone,histone modification,broad histone mark" H3K4me1-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF969BRI https://www.encodeproject.org/files/ENCFF969BRI/@@download/ENCFF969BRI.bam ENCFF376UFE https://www.encodeproject.org/files/ENCFF376UFE/@@download/ENCFF376UFE.bam 16.2 M 0 12.0 M 0.741 SE 36 36 native 0.0 M 8.9 M 8.2 M 0.508 0.93 0.93 14.50 200 1.25 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/82d386c4-e28c-4039-9cc5-80634e0213a6/@@download/cross_correlation_plot/ENCFF000CWD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIL ENCFF000CWD Illumina Genome Analyzer II 2016-11-11T15:28:42.890816+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfqvQ03694QfG5pQpFBJg1 ENCSR000APJ https://www.encodeproject.org/experiments/ENCSR000APJ "histone,histone modification,broad histone mark" H3K4me1-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF710VOI https://www.encodeproject.org/files/ENCFF710VOI/@@download/ENCFF710VOI.bam ENCFF959XHT https://www.encodeproject.org/files/ENCFF959XHT/@@download/ENCFF959XHT.bam 42.6 M 0 38.8 M 0.910 SE 36 36 native 0.0 M 31.9 M 21.9 M 0.514 0.71 0.70 3.16 160 1.13 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/76bdb4d1-66bf-45d6-81e4-46c324dcf39f/@@download/cross_correlation_plot/ENCFF000CWF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIM ENCFF000CWF Illumina Genome Analyzer II 2016-11-11T15:29:35.879688+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfv1j0369JV8BkgQ8xvP75 ENCSR000APK https://www.encodeproject.org/experiments/ENCSR000APK "histone,histone modification,narrow histone mark" H3K4me2-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF200DFO https://www.encodeproject.org/files/ENCFF200DFO/@@download/ENCFF200DFO.bam ENCFF247EUD https://www.encodeproject.org/files/ENCFF247EUD/@@download/ENCFF247EUD.bam 18.1 M 0 12.7 M 0.700 SE 36 36 native 0.0 M 9.4 M 8.6 M 0.478 0.92 0.92 12.89 195 1.64 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/4762b94e-658e-4377-ab62-179f5946ae8d/@@download/cross_correlation_plot/ENCFF000CWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIR ENCFF000CWJ Illumina Genome Analyzer IIe 2016-11-11T15:31:32.960041+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfb00036953q5qVQkfJgfB ENCSR000APK https://www.encodeproject.org/experiments/ENCSR000APK "histone,histone modification,narrow histone mark" H3K4me2-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF164XYU https://www.encodeproject.org/files/ENCFF164XYU/@@download/ENCFF164XYU.bam ENCFF629PXI https://www.encodeproject.org/files/ENCFF629PXI/@@download/ENCFF629PXI.bam 42.5 M 0 39.4 M 0.925 SE 36 36 native 0.0 M 32.5 M 28.2 M 0.663 0.88 0.88 8.34 170 1.34 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/84fb9591-4a18-475d-a90e-57bfb7465675/@@download/cross_correlation_plot/ENCFF000CWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIQ ENCFF000CWV Illumina Genome Analyzer IIx 2016-11-11T15:32:47.830756+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfb4j0369JKzYX9Gzz3B58 ENCSR000ATH https://www.encodeproject.org/experiments/ENCSR000ATH "histone,histone modification,narrow histone mark" H3K4me3-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF164SGX https://www.encodeproject.org/files/ENCFF164SGX/@@download/ENCFF164SGX.bam ENCFF968OBB https://www.encodeproject.org/files/ENCFF968OBB/@@download/ENCFF968OBB.bam 18.0 M 0 12.0 M 0.663 SE 36 36 None 0.0 M 8.5 M 8.1 M 0.449 0.97 0.97 29.18 205 1.37 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/42e3a853-eb7d-4a59-a271-4107dc412983/@@download/cross_correlation_plot/ENCFF000CTU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMV ENCFF000CTU Illumina Genome Analyzer IIe 2016-08-10T01:12:48.979894+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJ780369BjkVxP0gkkqXP ENCSR000ATH https://www.encodeproject.org/experiments/ENCSR000ATH "histone,histone modification,narrow histone mark" H3K4me3-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF684ZOU https://www.encodeproject.org/files/ENCFF684ZOU/@@download/ENCFF684ZOU.bam ENCFF179JXS https://www.encodeproject.org/files/ENCFF179JXS/@@download/ENCFF179JXS.bam 42.5 M 0 38.4 M 0.902 SE 36 36 None 0.0 M 31.2 M 27.7 M 0.651 0.90 0.91 12.48 165 1.69 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/82b03b33-c46a-4e34-a526-ff9af750befc/@@download/cross_correlation_plot/ENCFF000CTW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMU bradley-bernstein:DNA_Lib 158 ENCFF000CTW HiSeq 2000 2016-08-10T01:14:01.840515+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJ98036962Q5vYZgxVQK2 ENCSR000ATH https://www.encodeproject.org/experiments/ENCSR000ATH "histone,histone modification,narrow histone mark" H3K4me3-human osteoblast primary cell 3 bradley-bernstein ENCODE2 GRCh38 ENCFF877XAA https://www.encodeproject.org/files/ENCFF877XAA/@@download/ENCFF877XAA.bam ENCFF048BUC https://www.encodeproject.org/files/ENCFF048BUC/@@download/ENCFF048BUC.bam 28.6 M 0 23.8 M 0.833 SE 36 36 None 0.0 M 20.0 M 16.5 M 0.576 0.83 0.84 6.17 230 1.82 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7eda11d-8087-4584-970f-2b9f573ba281/@@download/cross_correlation_plot/ENCFF000CTV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AMT bradley-bernstein:DNA_Lib 1386 ENCFF000CTV HiSeq 2000 2016-08-10T01:13:17.811867+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJFj0369JB9ykPvgzPPZ9 ENCSR000ASG https://www.encodeproject.org/experiments/ENCSR000ASG "histone,histone modification,broad histone mark" H3K79me2-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF844TUM https://www.encodeproject.org/files/ENCFF844TUM/@@download/ENCFF844TUM.bam ENCFF876DRF https://www.encodeproject.org/files/ENCFF876DRF/@@download/ENCFF876DRF.bam 83.5 M 0 81.3 M 0.974 SE 36 36 native 0.0 M 62.9 M 56.5 M 0.677 0.91 0.91 11.65 140 1.07 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c3bc6fc-331a-4072-90d6-0bbd43cb1e3c/@@download/cross_correlation_plot/ENCFF000CUO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADG bradley-bernstein:DNA_Lib 159 ENCFF000CUO HiSeq 2000 2016-11-29T17:58:31.425406+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfjPQ03694QfG5pQpFBJZB ENCSR000ASG https://www.encodeproject.org/experiments/ENCSR000ASG "histone,histone modification,broad histone mark" H3K79me2-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF157NXN https://www.encodeproject.org/files/ENCFF157NXN/@@download/ENCFF157NXN.bam ENCFF338PYH https://www.encodeproject.org/files/ENCFF338PYH/@@download/ENCFF338PYH.bam 32.9 M 0 31.0 M 0.944 SE 36 36 native 0.0 M 24.5 M 23.4 M 0.712 0.96 0.96 22.83 140 1.10 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2fe0a2e-0a97-42e9-8bcb-921b36635033/@@download/cross_correlation_plot/ENCFF000CUJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADH ENCFF000CUJ Illumina Genome Analyzer IIx 2016-11-11T15:31:23.528785+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfjf00369BV37kpGJfBKBP ENCSR000APL https://www.encodeproject.org/experiments/ENCSR000APL "histone,histone modification,broad histone mark" H3K9me3-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF200UYG https://www.encodeproject.org/files/ENCFF200UYG/@@download/ENCFF200UYG.bam ENCFF402OVT https://www.encodeproject.org/files/ENCFF402OVT/@@download/ENCFF402OVT.bam 45.2 M 0 40.7 M 0.902 SE 36 36 native 0.0 M 27.1 M 25.5 M 0.564 0.95 0.95 19.02 135 1.03 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/86a95392-4d2e-47d8-9930-3e7235b2ca20/@@download/cross_correlation_plot/ENCFF000CWW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHF ENCFF000CWW Illumina Genome Analyzer IIx 2016-11-11T15:33:14.792613+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfZZ80369986BVPGZ1JZ4B ENCSR000APL https://www.encodeproject.org/experiments/ENCSR000APL "histone,histone modification,broad histone mark" H3K9me3-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF574PZA https://www.encodeproject.org/files/ENCFF574PZA/@@download/ENCFF574PZA.bam ENCFF346RMW https://www.encodeproject.org/files/ENCFF346RMW/@@download/ENCFF346RMW.bam 45.1 M 0 40.3 M 0.892 SE 36 36 native 0.0 M 27.0 M 24.4 M 0.541 0.91 0.91 11.69 145 1.03 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/2acd4906-7ff6-4553-8546-02896d90ba2a/@@download/cross_correlation_plot/ENCFF000CWX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHE ENCFF000CWX Illumina Genome Analyzer IIx 2016-11-11T15:33:03.048278+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfZkQ036931286X9jZK4pQ ENCSR000AQT https://www.encodeproject.org/experiments/ENCSR000AQT "histone,histone modification,broad histone mark" H4K20me1-human osteoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF769AQO https://www.encodeproject.org/files/ENCFF769AQO/@@download/ENCFF769AQO.bam ENCFF194FLQ https://www.encodeproject.org/files/ENCFF194FLQ/@@download/ENCFF194FLQ.bam 24.3 M 0 13.3 M 0.548 SE 36 36 native 0.0 M 8.9 M 8.5 M 0.348 0.97 0.97 34.01 180 1.03 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e0d12fc-69f9-4088-880a-c150ec2c2175/@@download/cross_correlation_plot/ENCFF000CUN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOQ ENCFF000CUN Illumina Genome Analyzer IIe 2016-11-11T15:27:56.937670+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfzj8036935XbqQ06p96Z8 ENCSR000AQT https://www.encodeproject.org/experiments/ENCSR000AQT "histone,histone modification,broad histone mark" H4K20me1-human osteoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF540VPY https://www.encodeproject.org/files/ENCFF540VPY/@@download/ENCFF540VPY.bam ENCFF805RZE https://www.encodeproject.org/files/ENCFF805RZE/@@download/ENCFF805RZE.bam 36.1 M 0 35.4 M 0.979 SE 36 36 native 0.0 M 27.4 M 24.3 M 0.673 0.89 0.89 8.99 145 1.03 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/3afda706-6d53-440a-80eb-e682f3cb5dfe/@@download/cross_correlation_plot/ENCFF000CUM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOP ENCFF000CUM Illumina Genome Analyzer IIx 2016-11-11T15:28:55.085443+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfzy00369JbJXk4G78GyQ1 ENCSR149EOW https://www.encodeproject.org/experiments/ENCSR149EOW control Control-human ovary tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF019QSC https://www.encodeproject.org/files/ENCFF019QSC/@@download/ENCFF019QSC.bam ENCFF496PZE https://www.encodeproject.org/files/ENCFF496PZE/@@download/ENCFF496PZE.bam 46.6 M 0 45.1 M 0.967 SE 76 76 native 0.0 M 40.1 M 38.8 M 0.832 0.97 0.97 34.38 205 1.00 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/c66f3c01-f88a-4b47-8311-b22be44589bc/@@download/cross_correlation_plot/ENCFF634JMR-ENCFF997BAS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB489NOE bradley-bernstein:DNA_Lib 8117 "ENCFF997BAS,ENCFF634JMR" HiSeq 2500 2016-10-27T21:59:23.006177+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Xz0036960kqK0JVbg5qj ENCSR509SEX https://www.encodeproject.org/experiments/ENCSR509SEX control Control-human ovary tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF010MTI https://www.encodeproject.org/files/ENCFF010MTI/@@download/ENCFF010MTI.bam ENCFF439OAX https://www.encodeproject.org/files/ENCFF439OAX/@@download/ENCFF439OAX.bam 62.9 M 0 60.7 M 0.965 SE 76 76 native 0.0 M 53.8 M 52.2 M 0.830 0.97 0.97 35.95 460 1.00 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/015abb0a-407a-43b8-a49e-b896a8a682f6/@@download/cross_correlation_plot/ENCFF093XYO-ENCFF355APW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB802SAA bradley-bernstein:DNA_Lib 8231 "ENCFF093XYO,ENCFF355APW" HiSeq 2500 2016-10-27T22:03:11.364571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Xqj03699VK2qfkF2ZqpF ENCSR404IRS https://www.encodeproject.org/experiments/ENCSR404IRS control Control-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR780OZE https://www.encodeproject.org/experiments/ENCSR780OZE "transcription factor,RNA binding protein" CTCF-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR256KRN https://www.encodeproject.org/experiments/ENCSR256KRN "histone,histone modification,narrow histone mark" H2AFZ-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR735SLW https://www.encodeproject.org/experiments/ENCSR735SLW "histone,histone modification,narrow histone mark" H3K27ac-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR370KYM https://www.encodeproject.org/experiments/ENCSR370KYM "histone,histone modification,broad histone mark" H3K27me3-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2500 unrunnable ENCSR481IYI https://www.encodeproject.org/experiments/ENCSR481IYI "histone,histone modification,broad histone mark" H3K36me3-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR434NUA https://www.encodeproject.org/experiments/ENCSR434NUA "histone,histone modification,broad histone mark" H3K4me1-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE "76,36" "HiSeq 2000,HiSeq 2500" unrunnable ENCSR106GXJ https://www.encodeproject.org/experiments/ENCSR106GXJ "histone,histone modification,narrow histone mark" H3K4me2-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR033OKS https://www.encodeproject.org/experiments/ENCSR033OKS "histone,histone modification,narrow histone mark" H3K4me3-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR619AAK https://www.encodeproject.org/experiments/ENCSR619AAK "histone,histone modification,broad histone mark" H3K79me2-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR492DBQ https://www.encodeproject.org/experiments/ENCSR492DBQ "histone,histone modification,narrow histone mark" H3K9ac-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR688SJY https://www.encodeproject.org/experiments/ENCSR688SJY "histone,histone modification,broad histone mark" H3K9me3-human Parathyroid adenoma tissue bradley-bernstein ENCODE3 pending SE 36 HiSeq 2000 unrunnable ENCSR328AHC https://www.encodeproject.org/experiments/ENCSR328AHC control Control-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF630PML https://www.encodeproject.org/files/ENCFF630PML/@@download/ENCFF630PML.bam ENCFF126PXT https://www.encodeproject.org/files/ENCFF126PXT/@@download/ENCFF126PXT.bam 63.2 M 0 60.6 M 0.958 SE "76,36" 36 36 0.0 M 46.0 M 44.8 M 0.709 0.98 0.98 47.62 195 1.01 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/9db972ef-fcf3-4a36-bdb0-69c94884bf1a/@@download/cross_correlation_plot/ENCFF349YSG-ENCFF775RGK-ENCFF829PCB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB936UNC bradley-bernstein:DNA_Lib 4558 "ENCFF349YSG,ENCFF775RGK,ENCFF829PCB" "HiSeq 2000,HiSeq 2500" 2016-11-08T04:16:53.611318+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJv70036954FbBZ1bGfF3q ENCSR328AHC https://www.encodeproject.org/experiments/ENCSR328AHC control Control-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF607ZQL https://www.encodeproject.org/files/ENCFF607ZQL/@@download/ENCFF607ZQL.bam ENCFF931SQB https://www.encodeproject.org/files/ENCFF931SQB/@@download/ENCFF931SQB.bam 81.6 M 0 79.4 M 0.973 SE 36 36 None 0.0 M 60.7 M 57.8 M 0.708 0.96 0.96 23.34 200 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/09cbc4f6-d17b-4957-8f77-543dc0864dd8/@@download/cross_correlation_plot/ENCFF799XPQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB486IOQ bradley-bernstein:DNA_Lib 5470 ENCFF799XPQ HiSeq 2500 2016-05-06T18:16:07.738382+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqF5Q03691Q4QQpZ2q8BKf ENCSR218QFN https://www.encodeproject.org/experiments/ENCSR218QFN "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human PC-3 immortalized cell line bradley-bernstein ENCODE3 pending SE 36 HiSeq 2500 unreviewed ENCSR617RSQ https://www.encodeproject.org/experiments/ENCSR617RSQ "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human PC-3 immortalized cell line bradley-bernstein ENCODE3 pending SE 36 "HiSeq 2000,HiSeq 2500" requires lab review ENCSR946QFD https://www.encodeproject.org/experiments/ENCSR946QFD "histone,histone modification,narrow histone mark" H2AFZ-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF401APS https://www.encodeproject.org/files/ENCFF401APS/@@download/ENCFF401APS.bam ENCFF310THR https://www.encodeproject.org/files/ENCFF310THR/@@download/ENCFF310THR.bam 38.8 M 0 36.5 M 0.939 SE 36 36 native 0.0 M 28.3 M 27.4 M 0.705 0.97 0.97 36.00 180 1.08 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/906e2c29-7d1c-4113-b55e-a2b831e900b1/@@download/cross_correlation_plot/ENCFF598PWF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB018JTO bradley-bernstein:DNA_Lib 4544 ENCFF598PWF HiSeq 2000 2016-12-14T23:07:48.415557+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18GF2Q03695QjpZJ3kXfPVX ENCSR946QFD https://www.encodeproject.org/experiments/ENCSR946QFD "histone,histone modification,narrow histone mark" H2AFZ-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF409DPO https://www.encodeproject.org/files/ENCFF409DPO/@@download/ENCFF409DPO.bam ENCFF649OOO https://www.encodeproject.org/files/ENCFF649OOO/@@download/ENCFF649OOO.bam 74.0 M 0 72.7 M 0.982 SE 36 36 native 0.0 M 57.5 M 53.8 M 0.727 0.94 0.94 15.99 215 1.06 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab490186-35a9-4ea4-82e9-fc320a80c37f/@@download/cross_correlation_plot/ENCFF700QWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB935KUR bradley-bernstein:DNA_Lib 5453 ENCFF700QWJ HiSeq 2500 2016-12-14T23:12:10.332883+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18GQgQ03699ff6KB3Z951v5 ENCSR461HUD https://www.encodeproject.org/experiments/ENCSR461HUD "histone,histone modification,broad histone mark" H3F3A-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF603HVI https://www.encodeproject.org/files/ENCFF603HVI/@@download/ENCFF603HVI.bam ENCFF866AZH https://www.encodeproject.org/files/ENCFF866AZH/@@download/ENCFF866AZH.bam 77.4 M 0 75.0 M 0.968 SE 36 36 native 0.0 M 58.2 M 51.1 M 0.660 0.88 0.88 8.25 190 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bfdfb10-5a9d-4506-9ba5-fb5c0953f4be/@@download/cross_correlation_plot/ENCFF684FCC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB893DXQ bradley-bernstein:DNA_Lib 5464 ENCFF684FCC HiSeq 2500 2016-11-05T17:42:38.549375+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KjZy003696QVKGb5b17zpF ENCSR826UTD https://www.encodeproject.org/experiments/ENCSR826UTD "histone,histone modification,narrow histone mark" H3K27ac-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF474QFK https://www.encodeproject.org/files/ENCFF474QFK/@@download/ENCFF474QFK.bam ENCFF009EHX https://www.encodeproject.org/files/ENCFF009EHX/@@download/ENCFF009EHX.bam 38.9 M 0 36.8 M 0.947 SE 36 36 native 0.0 M 30.7 M 26.2 M 0.675 0.87 0.90 11.42 200 1.68 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4adc780-f68c-42ba-acdf-2e200fbaa0f5/@@download/cross_correlation_plot/ENCFF794NKI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB560SRL bradley-bernstein:DNA_Lib 4545 ENCFF794NKI HiSeq 2000 2016-08-09T15:15:55.520841+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPV5j0369974fJyGkqJ32b ENCSR826UTD https://www.encodeproject.org/experiments/ENCSR826UTD "histone,histone modification,narrow histone mark" H3K27ac-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF174JIG https://www.encodeproject.org/files/ENCFF174JIG/@@download/ENCFF174JIG.bam ENCFF114HEM https://www.encodeproject.org/files/ENCFF114HEM/@@download/ENCFF114HEM.bam 72.4 M 0 71.1 M 0.982 SE 36 36 native 0.0 M 59.3 M 48.2 M 0.666 0.82 0.85 7.98 245 1.37 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/e870dd04-ebd4-424a-88a3-ae5105f3b087/@@download/cross_correlation_plot/ENCFF468EBP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB714CJJ bradley-bernstein:DNA_Lib 5454 ENCFF468EBP HiSeq 2500 2016-08-09T15:17:22.691335+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPV88036960B8Gf4bq7057 ENCSR881TWJ https://www.encodeproject.org/experiments/ENCSR881TWJ "histone,histone modification,broad histone mark" H3K27me3-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF127CPB https://www.encodeproject.org/files/ENCFF127CPB/@@download/ENCFF127CPB.bam ENCFF588XIG https://www.encodeproject.org/files/ENCFF588XIG/@@download/ENCFF588XIG.bam 79.8 M 0 76.7 M 0.961 SE "76,36" 36 36 0.0 M 57.9 M 55.5 M 0.696 0.96 0.96 25.48 165 1.02 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba3ac0d3-9ce2-49b7-b1f9-1a74eb44cee7/@@download/cross_correlation_plot/ENCFF695YQQ-ENCFF454VSX-ENCFF281ZEA_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB806AMH bradley-bernstein:DNA_Lib 4546 "ENCFF695YQQ,ENCFF454VSX,ENCFF281ZEA" "HiSeq 2000,HiSeq 2500" 2016-11-08T04:27:33.803325+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QK6p80369F4g82fJbGXkJJ ENCSR881TWJ https://www.encodeproject.org/experiments/ENCSR881TWJ "histone,histone modification,broad histone mark" H3K27me3-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF347INE https://www.encodeproject.org/files/ENCFF347INE/@@download/ENCFF347INE.bam ENCFF361MUN https://www.encodeproject.org/files/ENCFF361MUN/@@download/ENCFF361MUN.bam 64.3 M 0 63.1 M 0.981 SE 36 36 native 0.0 M 48.8 M 45.4 M 0.706 0.93 0.93 14.61 205 1.02 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/d58d12db-f73e-41c7-adf2-9f3f79539771/@@download/cross_correlation_plot/ENCFF299BLB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB711MXO bradley-bernstein:DNA_Lib 5455 ENCFF299BLB HiSeq 2500 2016-08-09T15:17:03.948075+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPVb0036960B8Gf4bq705Y ENCSR849APH https://www.encodeproject.org/experiments/ENCSR849APH "histone,histone modification,broad histone mark" H3K36me3-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF524FTE https://www.encodeproject.org/files/ENCFF524FTE/@@download/ENCFF524FTE.bam ENCFF033NLT https://www.encodeproject.org/files/ENCFF033NLT/@@download/ENCFF033NLT.bam 86.6 M 0 83.6 M 0.965 SE "76,36" 36 36 0.0 M 59.7 M 57.7 M 0.666 0.97 0.97 31.46 170 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca0ecaf0-ecff-4065-a5ca-e31633e4dc2f/@@download/cross_correlation_plot/ENCFF972MHR-ENCFF827VWB-ENCFF477TGR_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB802IUL bradley-bernstein:DNA_Lib 4547 "ENCFF972MHR,ENCFF477TGR,ENCFF827VWB" "HiSeq 2000,HiSeq 2500" 2016-11-08T04:26:50.551677+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QK5JQ0369F4g82fJbGXkGP ENCSR849APH https://www.encodeproject.org/experiments/ENCSR849APH "histone,histone modification,broad histone mark" H3K36me3-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF771QMX https://www.encodeproject.org/files/ENCFF771QMX/@@download/ENCFF771QMX.bam ENCFF414MKQ https://www.encodeproject.org/files/ENCFF414MKQ/@@download/ENCFF414MKQ.bam 58.4 M 0 57.3 M 0.982 SE 36 36 native 0.0 M 43.2 M 41.2 M 0.706 0.96 0.96 22.38 195 1.02 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/1303ade1-3bd3-4918-acbe-eb374a99dede/@@download/cross_correlation_plot/ENCFF740ISH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB833SNG bradley-bernstein:DNA_Lib 5456 ENCFF740ISH HiSeq 2500 2016-11-08T04:24:57.402271+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QK4zj03696kxzJj982F8fz ENCSR566UMF https://www.encodeproject.org/experiments/ENCSR566UMF "histone,histone modification,broad histone mark" H3K4me1-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF015DTK https://www.encodeproject.org/files/ENCFF015DTK/@@download/ENCFF015DTK.bam ENCFF276XAP https://www.encodeproject.org/files/ENCFF276XAP/@@download/ENCFF276XAP.bam 43.7 M 0 41.7 M 0.953 SE 36 36 native 0.0 M 34.1 M 32.8 M 0.750 0.97 0.97 31.06 170 1.16 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/69f28f42-9482-42e3-95a2-451a21cec6d2/@@download/cross_correlation_plot/ENCFF837VDZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB651KLP bradley-bernstein:DNA_Lib 4548 ENCFF837VDZ HiSeq 2000 2016-08-09T15:16:51.070829+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPVj0036960B8Gf4bq7061 ENCSR566UMF https://www.encodeproject.org/experiments/ENCSR566UMF "histone,histone modification,broad histone mark" H3K4me1-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF733BZR https://www.encodeproject.org/files/ENCFF733BZR/@@download/ENCFF733BZR.bam ENCFF056NKV https://www.encodeproject.org/files/ENCFF056NKV/@@download/ENCFF056NKV.bam 63.5 M 0 62.5 M 0.983 SE 36 36 native 0.0 M 50.5 M 47.7 M 0.751 0.95 0.95 19.18 215 1.06 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f9d8db3-f257-4d10-958e-c0b00ade28a4/@@download/cross_correlation_plot/ENCFF370IQS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB582WFP bradley-bernstein:DNA_Lib 5457 ENCFF370IQS HiSeq 2500 2016-08-09T15:17:31.171978+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPVp8036960B8Gf4bq706B ENCSR788EQL https://www.encodeproject.org/experiments/ENCSR788EQL "histone,histone modification,narrow histone mark" H3K4me2-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF331ZAT https://www.encodeproject.org/files/ENCFF331ZAT/@@download/ENCFF331ZAT.bam ENCFF210QSO https://www.encodeproject.org/files/ENCFF210QSO/@@download/ENCFF210QSO.bam 33.7 M 0 32.1 M 0.955 SE 36 36 native 0.0 M 26.4 M 25.2 M 0.748 0.96 0.96 26.09 175 1.30 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e0537cb-d2d5-40fa-92e3-d621b266b6d5/@@download/cross_correlation_plot/ENCFF276HDS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB468TAY bradley-bernstein:DNA_Lib 4549 ENCFF276HDS HiSeq 2000 2016-08-09T16:51:16.139723+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7B803692zxj1pQ2ky7b2 ENCSR788EQL https://www.encodeproject.org/experiments/ENCSR788EQL "histone,histone modification,narrow histone mark" H3K4me2-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF676WCW https://www.encodeproject.org/files/ENCFF676WCW/@@download/ENCFF676WCW.bam ENCFF761QWW https://www.encodeproject.org/files/ENCFF761QWW/@@download/ENCFF761QWW.bam 69.0 M 0 67.8 M 0.983 SE 36 36 native 0.0 M 56.1 M 51.0 M 0.740 0.91 0.92 12.80 215 1.20 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/89865fa5-fc95-415f-a3af-2ea7bf7ab6fe/@@download/cross_correlation_plot/ENCFF791APF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB433HKO bradley-bernstein:DNA_Lib 5458 ENCFF791APF HiSeq 2500 2016-08-09T16:52:48.339332+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7Gj03697XQQZkv2f4gZ9 ENCSR275NCH https://www.encodeproject.org/experiments/ENCSR275NCH "histone,histone modification,narrow histone mark" H3K4me3-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF615BTY https://www.encodeproject.org/files/ENCFF615BTY/@@download/ENCFF615BTY.bam ENCFF068OPO https://www.encodeproject.org/files/ENCFF068OPO/@@download/ENCFF068OPO.bam 44.2 M 0 42.3 M 0.956 SE "76,36" 36 36 0.0 M 31.8 M 30.1 M 0.682 0.95 0.96 24.37 185 1.26 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d06f415-522f-4d82-8f89-96cc6a4add3e/@@download/cross_correlation_plot/ENCFF539SZB-ENCFF778TII-ENCFF813QXK_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB485KDR bradley-bernstein:DNA_Lib 4550 "ENCFF778TII,ENCFF539SZB,ENCFF813QXK" "HiSeq 2000,HiSeq 2500" 2016-11-08T04:19:40.175494+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QK1g003696jy9Kv0B4YQ4x ENCSR275NCH https://www.encodeproject.org/experiments/ENCSR275NCH "histone,histone modification,narrow histone mark" H3K4me3-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF418OAG https://www.encodeproject.org/files/ENCFF418OAG/@@download/ENCFF418OAG.bam ENCFF125FLF https://www.encodeproject.org/files/ENCFF125FLF/@@download/ENCFF125FLF.bam 64.3 M 0 63.0 M 0.980 SE 36 36 native 0.0 M 51.3 M 45.2 M 0.703 0.89 0.90 11.13 235 1.30 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e19dfc6-d3af-4445-b03f-ac5f1a2e0162/@@download/cross_correlation_plot/ENCFF749AYN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB629HBR bradley-bernstein:DNA_Lib 5459 ENCFF749AYN HiSeq 2500 2016-08-09T15:17:44.489979+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPVK8036954fQ2pjbyjJXp ENCSR695SCQ https://www.encodeproject.org/experiments/ENCSR695SCQ "histone,histone modification,broad histone mark" H3K79me2-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF738ANW https://www.encodeproject.org/files/ENCFF738ANW/@@download/ENCFF738ANW.bam ENCFF865QAE https://www.encodeproject.org/files/ENCFF865QAE/@@download/ENCFF865QAE.bam 80.7 M 0 77.2 M 0.957 SE "76,36" 36 36 0.0 M 59.9 M 55.8 M 0.691 0.94 0.94 16.40 175 1.04 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb7ea478-349f-4995-bf89-0c2dc79624f7/@@download/cross_correlation_plot/ENCFF072DIO-ENCFF964AUG-ENCFF838IER_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB969DEQ bradley-bernstein:DNA_Lib 4551 "ENCFF964AUG,ENCFF838IER,ENCFF072DIO" "HiSeq 2000,HiSeq 2500" 2016-11-08T04:17:43.770848+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJzF803696jy9Kv0B4YQ2Z ENCSR695SCQ https://www.encodeproject.org/experiments/ENCSR695SCQ "histone,histone modification,broad histone mark" H3K79me2-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF481PDX https://www.encodeproject.org/files/ENCFF481PDX/@@download/ENCFF481PDX.bam ENCFF152TKT https://www.encodeproject.org/files/ENCFF152TKT/@@download/ENCFF152TKT.bam 62.0 M 0 60.9 M 0.982 SE 36 36 native 0.0 M 48.1 M 44.4 M 0.717 0.93 0.93 14.59 -5 1.06 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/c85a73b6-1271-433c-9a11-1aa3f772549e/@@download/cross_correlation_plot/ENCFF228ITV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB701YDY bradley-bernstein:DNA_Lib 5460 ENCFF228ITV HiSeq 2500 2016-11-08T04:17:21.968310+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJzQQ03696jy9Kv0B4YQ2v ENCSR197QXT https://www.encodeproject.org/experiments/ENCSR197QXT "histone,histone modification,narrow histone mark" H3K9ac-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF750RQN https://www.encodeproject.org/files/ENCFF750RQN/@@download/ENCFF750RQN.bam ENCFF638AJS https://www.encodeproject.org/files/ENCFF638AJS/@@download/ENCFF638AJS.bam 37.4 M 0 35.2 M 0.941 SE 36 36 native 0.0 M 28.2 M 25.2 M 0.674 0.91 0.91 11.96 225 1.34 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f654a46-0790-45b2-9b1a-e094e43fd6e8/@@download/cross_correlation_plot/ENCFF815VLD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB940VZZ bradley-bernstein:DNA_Lib 4552 ENCFF815VLD HiSeq 2000 2016-08-09T16:51:25.693159+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7QQ036900FyV0Q3P2pK9 ENCSR197QXT https://www.encodeproject.org/experiments/ENCSR197QXT "histone,histone modification,narrow histone mark" H3K9ac-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF392DJM https://www.encodeproject.org/files/ENCFF392DJM/@@download/ENCFF392DJM.bam ENCFF541YIX https://www.encodeproject.org/files/ENCFF541YIX/@@download/ENCFF541YIX.bam 66.7 M 0 65.4 M 0.980 SE 36 36 native 0.0 M 53.2 M 43.2 M 0.648 0.82 0.82 5.67 255 1.21 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ede94a2-02b0-4b95-bb73-d64099d0c827/@@download/cross_correlation_plot/ENCFF644SSR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB921NJR bradley-bernstein:DNA_Lib 5461 ENCFF644SSR HiSeq 2500 2016-08-09T16:52:53.780046+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7Xj0369Kqg9Fjv2vpQ8p ENCSR943LZX https://www.encodeproject.org/experiments/ENCSR943LZX "histone,histone modification,broad histone mark" H3K9me2-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF978HNT https://www.encodeproject.org/files/ENCFF978HNT/@@download/ENCFF978HNT.bam ENCFF747RKT https://www.encodeproject.org/files/ENCFF747RKT/@@download/ENCFF747RKT.bam 79.2 M 0 76.2 M 0.962 SE "76,36" 36 36 0.0 M 58.3 M 56.1 M 0.708 0.96 0.96 28.10 185 1.01 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad21913c-200f-4549-806b-633cb2920c65/@@download/cross_correlation_plot/ENCFF139EKW-ENCFF684RZV-ENCFF858GLL_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB426JLR bradley-bernstein:DNA_Lib 4555 "ENCFF858GLL,ENCFF139EKW,ENCFF684RZV" "HiSeq 2000,HiSeq 2500" 2016-11-08T04:21:02.830007+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QK3200369B9XVbg4B76Z4j ENCSR943LZX https://www.encodeproject.org/experiments/ENCSR943LZX "histone,histone modification,broad histone mark" H3K9me2-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF791ZAM https://www.encodeproject.org/files/ENCFF791ZAM/@@download/ENCFF791ZAM.bam ENCFF931RLI https://www.encodeproject.org/files/ENCFF931RLI/@@download/ENCFF931RLI.bam 74.6 M 0 72.4 M 0.970 SE 36 36 native 0.0 M 55.5 M 51.9 M 0.695 0.94 0.94 15.80 210 1.01 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/15fece8a-1119-432b-8980-7c1c80589074/@@download/cross_correlation_plot/ENCFF433BBA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB019XUS bradley-bernstein:DNA_Lib 5463 ENCFF433BBA HiSeq 2500 2016-11-08T04:22:40.134423+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QK3Gj0369Fq9ppXVbB9Kjb ENCSR339ZMJ https://www.encodeproject.org/experiments/ENCSR339ZMJ "histone,histone modification,broad histone mark" H3K9me3-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF303VJF https://www.encodeproject.org/files/ENCFF303VJF/@@download/ENCFF303VJF.bam ENCFF720WMC https://www.encodeproject.org/files/ENCFF720WMC/@@download/ENCFF720WMC.bam 80.3 M 0 76.6 M 0.954 SE "76,36" 36 36 0.0 M 52.9 M 51.4 M 0.640 0.97 0.97 36.21 195 1.01 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/948ea2ce-a90f-4cb3-a756-d437bea60040/@@download/cross_correlation_plot/ENCFF851HWF-ENCFF089FVI-ENCFF724FTJ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB316JNQ bradley-bernstein:DNA_Lib 4553 "ENCFF724FTJ,ENCFF851HWF,ENCFF089FVI" "HiSeq 2000,HiSeq 2500" 2016-11-08T04:29:04.072934+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QK8Jj036945FQkxk8GJyfk ENCSR339ZMJ https://www.encodeproject.org/experiments/ENCSR339ZMJ "histone,histone modification,broad histone mark" H3K9me3-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF725XNH https://www.encodeproject.org/files/ENCFF725XNH/@@download/ENCFF725XNH.bam ENCFF199KKK https://www.encodeproject.org/files/ENCFF199KKK/@@download/ENCFF199KKK.bam 68.5 M 0 66.3 M 0.968 SE 36 36 native 0.0 M 46.1 M 43.8 M 0.639 0.95 0.95 21.04 215 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/566f9faa-c16d-4051-a38a-c4ed544d6e4c/@@download/cross_correlation_plot/ENCFF689CTT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB910ALN bradley-bernstein:DNA_Lib 5462 ENCFF689CTT HiSeq 2500 2016-11-08T04:29:40.614832+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QK8Qj036945FQkxk8GJyg0 ENCSR764KFK https://www.encodeproject.org/experiments/ENCSR764KFK "histone,histone modification,broad histone mark" H4K20me1-human PC-3 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF941MLP https://www.encodeproject.org/files/ENCFF941MLP/@@download/ENCFF941MLP.bam ENCFF009SLT https://www.encodeproject.org/files/ENCFF009SLT/@@download/ENCFF009SLT.bam 75.2 M 0 72.1 M 0.959 SE "76,36" 36 36 0.0 M 55.5 M 53.8 M 0.715 0.97 0.97 35.04 200 1.01 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c02f2a8-5199-4934-a2ea-1f9be0b4044c/@@download/cross_correlation_plot/ENCFF710VOF-ENCFF588EWD-ENCFF409BNB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB099NRO bradley-bernstein:DNA_Lib 4554 "ENCFF409BNB,ENCFF710VOF,ENCFF588EWD" "HiSeq 2000,HiSeq 2500" 2016-12-14T23:05:31.251301+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1896z003695ZjjX2BpbF53g ENCSR764KFK https://www.encodeproject.org/experiments/ENCSR764KFK "histone,histone modification,broad histone mark" H4K20me1-human PC-3 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF274VKN https://www.encodeproject.org/files/ENCFF274VKN/@@download/ENCFF274VKN.bam ENCFF715MSJ https://www.encodeproject.org/files/ENCFF715MSJ/@@download/ENCFF715MSJ.bam 62.1 M 0 60.3 M 0.970 SE 36 36 36 0.0 M 46.6 M 44.1 M 0.709 0.95 0.95 19.09 190 1.01 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce63927d-2cb1-4a07-b6cd-154afdfa44a4/@@download/cross_correlation_plot/ENCFF954GPQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB689IWN bradley-bernstein:DNA_Lib 5465 ENCFF954GPQ HiSeq 2500 2016-12-14T23:05:57.269043+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18979j03691Gf0q79x2xFky ENCSR011GWK https://www.encodeproject.org/experiments/ENCSR011GWK control Control-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF754MHP https://www.encodeproject.org/files/ENCFF754MHP/@@download/ENCFF754MHP.bam ENCFF855LCR https://www.encodeproject.org/files/ENCFF855LCR/@@download/ENCFF855LCR.bam 69.8 M 0 67.8 M 0.971 SE 76 76 native 0.0 M 59.8 M 57.0 M 0.816 0.96 0.96 23.96 240 1.01 3.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fd74b7a-fb20-4354-ae3b-23bb52fc230b/@@download/cross_correlation_plot/ENCFF163PYU-ENCFF522PVI-ENCFF639RMG-ENCFF716YLE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB539LMN bradley-bernstein:DNA_Lib 5598 "ENCFF639RMG,ENCFF716YLE,ENCFF163PYU,ENCFF522PVI" HiSeq 2500 2017-01-10T15:48:16.872588+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kxvzQ03696yX0b3ZJyGb22 ENCSR011GWK https://www.encodeproject.org/experiments/ENCSR011GWK control Control-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF356MAB https://www.encodeproject.org/files/ENCFF356MAB/@@download/ENCFF356MAB.bam ENCFF016PFU https://www.encodeproject.org/files/ENCFF016PFU/@@download/ENCFF016PFU.bam 139.6 M 0 136.5 M 0.978 PE 76 76 native 59.0 M 0.0 M 56.3 M 0.806 0.95 0.95 21.71 225 1.03 19.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/152e05bd-9788-45c3-be3f-4760fc274544/@@download/cross_correlation_plot/ENCFF163PYU-ENCFF522PVI-ENCFF639RMG-ENCFF716YLE_pooledENCFF486LTO-ENCFF272GOE-ENCFF830CTU-ENCFF665BBC_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB539LMN bradley-bernstein:DNA_Lib 5598 "ENCFF830CTU,ENCFF486LTO,ENCFF639RMG,ENCFF716YLE,ENCFF665BBC,ENCFF272GOE,ENCFF163PYU,ENCFF522PVI" HiSeq 2500 2016-11-15T02:30:12.114153+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfYkQ0369986BVPGZ1JZ3Z ENCSR011GWK https://www.encodeproject.org/experiments/ENCSR011GWK control Control-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF832PWH https://www.encodeproject.org/files/ENCFF832PWH/@@download/ENCFF832PWH.bam ENCFF128JTM https://www.encodeproject.org/files/ENCFF128JTM/@@download/ENCFF128JTM.bam 124.7 M 0 120.6 M 0.967 SE 76 76 native 0.0 M 106.0 M 100.9 M 0.809 0.96 0.96 23.43 170 1.01 2.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/42624d18-3650-4275-a75b-085b0a9b1b9d/@@download/cross_correlation_plot/ENCFF452ROQ-ENCFF527WMD-ENCFF057DOL-ENCFF584YEG-ENCFF243MZN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB216AGC bradley-bernstein:DNA_Lib 6051 "ENCFF243MZN,ENCFF057DOL,ENCFF527WMD,ENCFF584YEG,ENCFF452ROQ" HiSeq 2500 2017-01-10T15:52:11.753714+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqQ8803695xjbF7B3vx507 ENCSR011GWK https://www.encodeproject.org/experiments/ENCSR011GWK control Control-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF196EDW https://www.encodeproject.org/files/ENCFF196EDW/@@download/ENCFF196EDW.bam ENCFF535SOA https://www.encodeproject.org/files/ENCFF535SOA/@@download/ENCFF535SOA.bam 249.5 M 0 243.8 M 0.977 PE 76 76 native 105.1 M 0.0 M 100.9 M 0.809 0.96 0.96 25.34 170 1.03 -6.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f4b6b2a-09cb-47b4-a873-b05e752ac69f/@@download/cross_correlation_plot/ENCFF452ROQ-ENCFF527WMD-ENCFF057DOL-ENCFF584YEG-ENCFF243MZN_pooledENCFF335TOI-ENCFF274YMK-ENCFF863XGE-ENCFF802LTL-ENCFF375CUH_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB216AGC bradley-bernstein:DNA_Lib 6051 "ENCFF243MZN,ENCFF802LTL,ENCFF057DOL,ENCFF527WMD,ENCFF375CUH,ENCFF584YEG,ENCFF452ROQ,ENCFF863XGE,ENCFF335TOI,ENCFF274YMK" HiSeq 2500 2016-11-15T02:39:50.849714+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfZ0Q036931286X9jZK4p0 ENCSR243INX https://www.encodeproject.org/experiments/ENCSR243INX "transcription factor,RNA binding protein" CTCF-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF624TDL https://www.encodeproject.org/files/ENCFF624TDL/@@download/ENCFF624TDL.bam ENCFF795OGB https://www.encodeproject.org/files/ENCFF795OGB/@@download/ENCFF795OGB.bam 41.1 M 0 39.7 M 0.965 SE 76 76 native 0.0 M 35.5 M 21.4 M 0.520 0.65 0.65 2.80 175 1.50 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/420c4d84-71a6-4d24-a3b2-5672d07a4222/@@download/cross_correlation_plot/ENCFF932CIF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB902ZJQ bradley-bernstein:DNA_Lib 5993 ENCFF932CIF HiSeq 2000 2017-01-05T00:21:30.716744+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F19346Q03697QpY56J2qQ4zx ENCSR243INX https://www.encodeproject.org/experiments/ENCSR243INX "transcription factor,RNA binding protein" CTCF-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF160MJQ https://www.encodeproject.org/files/ENCFF160MJQ/@@download/ENCFF160MJQ.bam ENCFF361ECE https://www.encodeproject.org/files/ENCFF361ECE/@@download/ENCFF361ECE.bam 43.1 M 0 41.7 M 0.968 SE 76 76 native 0.0 M 37.7 M 31.5 M 0.732 0.84 0.84 6.32 245 1.42 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/075c682d-c8d8-4884-b1e7-368ff15068bc/@@download/cross_correlation_plot/ENCFF411AYK-ENCFF248HFJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB891EJR bradley-bernstein:DNA_Lib 5574 "ENCFF248HFJ,ENCFF411AYK" HiSeq 2500 2016-12-15T10:40:13.045932+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1934Fj0369F00q32BFF7Gx9 ENCSR491WAP https://www.encodeproject.org/experiments/ENCSR491WAP "histone,histone modification,narrow histone mark" H2AFZ-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF673IHH https://www.encodeproject.org/files/ENCFF673IHH/@@download/ENCFF673IHH.bam ENCFF209IQJ https://www.encodeproject.org/files/ENCFF209IQJ/@@download/ENCFF209IQJ.bam 77.0 M 0 75.0 M 0.974 PE 76 76 native 32.4 M 0.0 M 31.1 M 0.807 0.96 0.96 23.50 160 1.07 4.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/42a1aa89-58c9-4078-bcd7-03734cf6191f/@@download/cross_correlation_plot/ENCFF099UVTENCFF372TLC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB134BRC bradley-bernstein:DNA_Lib 5996 "ENCFF372TLC,ENCFF099UVT" HiSeq 2000 2017-01-13T01:14:04.609090+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfY88036984XkYP1yq4VKg ENCSR491WAP https://www.encodeproject.org/experiments/ENCSR491WAP "histone,histone modification,narrow histone mark" H2AFZ-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF604KSI https://www.encodeproject.org/files/ENCFF604KSI/@@download/ENCFF604KSI.bam ENCFF470RAQ https://www.encodeproject.org/files/ENCFF470RAQ/@@download/ENCFF470RAQ.bam 68.1 M 0 66.6 M 0.978 PE 76 76 native 28.8 M 0.0 M 27.9 M 0.819 0.97 0.97 31.07 210 1.09 4.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5cff18b-2b7c-4d02-9473-d81bdbfa6dd7/@@download/cross_correlation_plot/ENCFF265TBNENCFF632CIK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB476WNE bradley-bernstein:DNA_Lib 6008 "ENCFF632CIK,ENCFF265TBN" HiSeq 2000 2017-01-13T01:13:32.764899+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfYQ00369JKzYX9Gzz3B4F ENCSR180AAB https://www.encodeproject.org/experiments/ENCSR180AAB "histone,histone modification,broad histone mark" H3F3A-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF763ZGF https://www.encodeproject.org/files/ENCFF763ZGF/@@download/ENCFF763ZGF.bam ENCFF727LGT https://www.encodeproject.org/files/ENCFF727LGT/@@download/ENCFF727LGT.bam 56.7 M 0 55.4 M 0.976 PE 76 76 native 24.0 M 0.0 M 19.5 M 0.689 0.81 0.81 5.00 190 1.10 8.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae20fd7f-76a8-422e-a0d6-6fcdbed1a6dc/@@download/cross_correlation_plot/ENCFF789QJVENCFF215HVP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB448BXO bradley-bernstein:DNA_Lib 6001 "ENCFF215HVP,ENCFF789QJV" HiSeq 2000 2016-11-12T00:42:30.919034+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfPJ80369Fbg36VZ8KyB7v ENCSR180AAB https://www.encodeproject.org/experiments/ENCSR180AAB "histone,histone modification,broad histone mark" H3F3A-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF792YEO https://www.encodeproject.org/files/ENCFF792YEO/@@download/ENCFF792YEO.bam ENCFF169AZJ https://www.encodeproject.org/files/ENCFF169AZJ/@@download/ENCFF169AZJ.bam 98.3 M 0 96.1 M 0.978 PE 76 76 native 41.8 M 0.0 M 39.5 M 0.804 0.94 0.94 17.93 200 1.05 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c6efd51-d4f7-4e6a-b23e-952e51841de0/@@download/cross_correlation_plot/ENCFF940FBYENCFF782IPK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB351FTG bradley-bernstein:DNA_Lib 6005 "ENCFF782IPK,ENCFF940FBY" HiSeq 2000 2016-11-12T00:47:06.435498+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfPZQ0369986BVPGZ1JZ28 ENCSR769FOC https://www.encodeproject.org/experiments/ENCSR769FOC "histone,histone modification,narrow histone mark" H3K27ac-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF655AIP https://www.encodeproject.org/files/ENCFF655AIP/@@download/ENCFF655AIP.bam ENCFF237PXW https://www.encodeproject.org/files/ENCFF237PXW/@@download/ENCFF237PXW.bam 39.2 M 0 38.2 M 0.973 SE 76 76 native 0.0 M 34.7 M 32.5 M 0.828 0.95 0.95 21.61 205 1.25 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d2934ed-3220-48d7-989e-4963872da4dc/@@download/cross_correlation_plot/ENCFF763WUN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB838GYU bradley-bernstein:DNA_Lib 5991 ENCFF763WUN HiSeq 2000 2016-11-11T04:26:38.936038+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XGbV00369BJY9x58Vj4vVZ ENCSR769FOC https://www.encodeproject.org/experiments/ENCSR769FOC "histone,histone modification,narrow histone mark" H3K27ac-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF299IGN https://www.encodeproject.org/files/ENCFF299IGN/@@download/ENCFF299IGN.bam ENCFF237EXU https://www.encodeproject.org/files/ENCFF237EXU/@@download/ENCFF237EXU.bam 43.5 M 0 42.1 M 0.969 SE 76 76 native 0.0 M 38.8 M 35.1 M 0.808 0.91 0.91 12.47 245 1.25 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/df55a6eb-8948-40a1-b30d-a51207cf1188/@@download/cross_correlation_plot/ENCFF443IWZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB187KMZ bradley-bernstein:DNA_Lib 5578 ENCFF443IWZ HiSeq 2500 2016-11-11T04:26:39.264311+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XGbg80369696p87G654XyB ENCSR726LZG https://www.encodeproject.org/experiments/ENCSR726LZG "histone,histone modification,broad histone mark" H3K27me3-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF014ESB https://www.encodeproject.org/files/ENCFF014ESB/@@download/ENCFF014ESB.bam ENCFF819NMV https://www.encodeproject.org/files/ENCFF819NMV/@@download/ENCFF819NMV.bam 40.8 M 0 39.8 M 0.976 SE 76 76 native 0.0 M 34.8 M 34.0 M 0.833 0.98 0.98 47.41 175 1.01 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/973092b1-cb89-4596-a88c-442f7649c0ea/@@download/cross_correlation_plot/ENCFF898PUQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB605CTR bradley-bernstein:DNA_Lib 5990 ENCFF898PUQ HiSeq 2000 2017-01-05T00:21:53.638915+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1935xj03695QjpZJ3kXff60 ENCSR726LZG https://www.encodeproject.org/experiments/ENCSR726LZG "histone,histone modification,broad histone mark" H3K27me3-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF217CGZ https://www.encodeproject.org/files/ENCFF217CGZ/@@download/ENCFF217CGZ.bam ENCFF670GBJ https://www.encodeproject.org/files/ENCFF670GBJ/@@download/ENCFF670GBJ.bam 52.9 M 0 50.9 M 0.963 SE 76 76 native 0.0 M 44.6 M 42.1 M 0.795 0.94 0.94 17.64 205 1.01 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/83ee7725-2c50-4e0a-b9c6-dbb593a9c24d/@@download/cross_correlation_plot/ENCFF887WTL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB049DKV bradley-bernstein:DNA_Lib 5581 ENCFF887WTL HiSeq 2500 2016-12-15T20:27:12.772765+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F19362j0369F00q32BFF7GyV ENCSR402SJV https://www.encodeproject.org/experiments/ENCSR402SJV "histone,histone modification,broad histone mark" H3K36me3-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF327CIX https://www.encodeproject.org/files/ENCFF327CIX/@@download/ENCFF327CIX.bam ENCFF674SWU https://www.encodeproject.org/files/ENCFF674SWU/@@download/ENCFF674SWU.bam 81.4 M 0 78.8 M 0.967 SE 76 76 native 0.0 M 69.2 M 65.8 M 0.809 0.95 0.96 22.55 195 1.01 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/83d7bcd3-ad20-4dde-b379-521bd967cb98/@@download/cross_correlation_plot/ENCFF897QKD-ENCFF599FMW-ENCFF064LHE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB666EWZ bradley-bernstein:DNA_Lib 5992 "ENCFF064LHE,ENCFF599FMW,ENCFF897QKD" "HiSeq 2000,HiSeq 2500" 2017-01-05T00:24:24.764224+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1939V80369F2xJYJ4yKpQb7 ENCSR402SJV https://www.encodeproject.org/experiments/ENCSR402SJV "histone,histone modification,broad histone mark" H3K36me3-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF936FVC https://www.encodeproject.org/files/ENCFF936FVC/@@download/ENCFF936FVC.bam ENCFF167LPM https://www.encodeproject.org/files/ENCFF167LPM/@@download/ENCFF167LPM.bam 49.0 M 0 47.2 M 0.963 SE 76 76 native 0.0 M 41.4 M 40.2 M 0.820 0.97 0.97 33.95 230 1.01 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c5027ed-4775-4c2f-8735-69307e139c7d/@@download/cross_correlation_plot/ENCFF193TYR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB830JFM bradley-bernstein:DNA_Lib 5577 ENCFF193TYR HiSeq 2500 2016-12-15T10:41:59.364172+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1939fQ0369F2xJYJ4yKpQbX ENCSR913MGR https://www.encodeproject.org/experiments/ENCSR913MGR "histone,histone modification,broad histone mark" H3K4me1-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF259FIB https://www.encodeproject.org/files/ENCFF259FIB/@@download/ENCFF259FIB.bam ENCFF437XPY https://www.encodeproject.org/files/ENCFF437XPY/@@download/ENCFF437XPY.bam 125.9 M 0 122.3 M 0.971 SE 76 76 native 0.0 M 110.3 M 103.2 M 0.819 0.94 0.94 16.80 260 1.02 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/9dc5a88d-b607-4b42-aeb3-b7d2ccc8d6fa/@@download/cross_correlation_plot/ENCFF155ORR-ENCFF888XMB-ENCFF519EJW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB807AVU,ENCLB208TNP,ENCLB940NTO" "bradley-bernstein:DNA_Lib 7821,bradley-bernstein:DNA_Lib 7824,bradley-bernstein:DNA_Lib 5987" "ENCFF155ORR,ENCFF519EJW,ENCFF888XMB" "HiSeq 2000,HiSeq 2500" 2017-01-05T00:26:34.124703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1937z803699pFPY6J841YB5 ENCSR913MGR https://www.encodeproject.org/experiments/ENCSR913MGR "histone,histone modification,broad histone mark" H3K4me1-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF865CNT https://www.encodeproject.org/files/ENCFF865CNT/@@download/ENCFF865CNT.bam ENCFF398IMA https://www.encodeproject.org/files/ENCFF398IMA/@@download/ENCFF398IMA.bam 34.7 M 0 33.9 M 0.977 SE 76 76 native 0.0 M 30.8 M 29.7 M 0.856 0.97 0.97 29.15 240 1.05 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/d202f4cc-dae4-4797-be9d-9037411fc882/@@download/cross_correlation_plot/ENCFF884PIX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB350BAB bradley-bernstein:DNA_Lib 5576 ENCFF884PIX HiSeq 2500 2016-12-15T10:40:05.958529+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F19384803695ZjjX2BpbFJKX ENCSR513KNS https://www.encodeproject.org/experiments/ENCSR513KNS "histone,histone modification,narrow histone mark" H3K4me2-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF739QKD https://www.encodeproject.org/files/ENCFF739QKD/@@download/ENCFF739QKD.bam ENCFF300FAF https://www.encodeproject.org/files/ENCFF300FAF/@@download/ENCFF300FAF.bam 35.0 M 0 34.2 M 0.977 SE 76 76 native 0.0 M 30.8 M 29.7 M 0.848 0.97 0.97 35.54 180 1.14 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/41b15fbf-8c70-4b75-8084-306016808b7a/@@download/cross_correlation_plot/ENCFF197USN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB169IMT bradley-bernstein:DNA_Lib 5988 ENCFF197USN HiSeq 2000 2017-01-05T00:21:36.492774+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1938X003695ZjjX2BpbFJP1 ENCSR513KNS https://www.encodeproject.org/experiments/ENCSR513KNS "histone,histone modification,narrow histone mark" H3K4me2-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF669DXP https://www.encodeproject.org/files/ENCFF669DXP/@@download/ENCFF669DXP.bam ENCFF018FMM https://www.encodeproject.org/files/ENCFF018FMM/@@download/ENCFF018FMM.bam 47.9 M 0 46.5 M 0.970 SE 76 76 native 0.0 M 42.3 M 38.7 M 0.807 0.91 0.92 12.22 220 1.21 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/32156c70-db19-442f-a911-19eef64eba4b/@@download/cross_correlation_plot/ENCFF917NQX-ENCFF591DAH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB936PFP bradley-bernstein:DNA_Lib 5579 "ENCFF917NQX,ENCFF591DAH" HiSeq 2500 2016-12-15T10:40:04.667008+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kq3j803692JY2V78v4y11g ENCSR441JWF https://www.encodeproject.org/experiments/ENCSR441JWF "histone,histone modification,narrow histone mark" H3K4me3-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF070IYN https://www.encodeproject.org/files/ENCFF070IYN/@@download/ENCFF070IYN.bam ENCFF762ODQ https://www.encodeproject.org/files/ENCFF762ODQ/@@download/ENCFF762ODQ.bam 38.8 M 0 37.8 M 0.974 SE 76 76 native 0.0 M 32.9 M 32.1 M 0.828 0.98 0.98 47.19 180 1.03 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/646d3b22-f9f7-498e-b9ec-0ccaf97df806/@@download/cross_correlation_plot/ENCFF792HPJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB841PMI bradley-bernstein:DNA_Lib 5989 ENCFF792HPJ HiSeq 2000 2016-11-11T04:28:50.868696+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XGjY00369696p87G654XyZ ENCSR441JWF https://www.encodeproject.org/experiments/ENCSR441JWF "histone,histone modification,narrow histone mark" H3K4me3-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF265NED https://www.encodeproject.org/files/ENCFF265NED/@@download/ENCFF265NED.bam ENCFF821YWD https://www.encodeproject.org/files/ENCFF821YWD/@@download/ENCFF821YWD.bam 51.5 M 0 49.5 M 0.962 SE 76 76 native 0.0 M 44.2 M 40.6 M 0.788 0.92 0.92 13.61 220 1.21 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/db29f594-410c-4b6e-80ca-9768f2517b8a/@@download/cross_correlation_plot/ENCFF920HHA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB487USW bradley-bernstein:DNA_Lib 5580 ENCFF920HHA HiSeq 2500 2016-11-11T04:27:37.384462+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XGff0036953q5qVQkfJfY5 ENCSR705SZP https://www.encodeproject.org/experiments/ENCSR705SZP "histone,histone modification,broad histone mark" H3K79me2-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF382PYV https://www.encodeproject.org/files/ENCFF382PYV/@@download/ENCFF382PYV.bam ENCFF078RSY https://www.encodeproject.org/files/ENCFF078RSY/@@download/ENCFF078RSY.bam 46.8 M 0 45.4 M 0.972 SE 76 76 native 0.0 M 40.6 M 37.9 M 0.811 0.94 0.94 17.62 170 1.02 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ba344bc-3be1-4ac5-a4de-4624b3b2504e/@@download/cross_correlation_plot/ENCFF392RHX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB483IJO bradley-bernstein:DNA_Lib 5997 ENCFF392RHX HiSeq 2000 2017-01-09T19:38:39.566658+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqVqQ03696XBx58qK9xG4F ENCSR705SZP https://www.encodeproject.org/experiments/ENCSR705SZP "histone,histone modification,broad histone mark" H3K79me2-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF898HLF https://www.encodeproject.org/files/ENCFF898HLF/@@download/ENCFF898HLF.bam ENCFF933WTA https://www.encodeproject.org/files/ENCFF933WTA/@@download/ENCFF933WTA.bam 69.8 M 0 66.9 M 0.959 SE 76 76 native 0.0 M 59.8 M 56.5 M 0.809 0.95 0.95 19.54 230 1.02 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/5601baa2-d6ce-4d84-9367-52669c2e125c/@@download/cross_correlation_plot/ENCFF851IDU-ENCFF376SIP-ENCFF197OPO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB306WZK bradley-bernstein:DNA_Lib 6006 "ENCFF197OPO,ENCFF851IDU,ENCFF376SIP" "HiSeq 2000,HiSeq 2500" 2017-01-09T22:52:55.436951+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kqX1803696yX0b3ZJyGZvQ ENCSR945KBK https://www.encodeproject.org/experiments/ENCSR945KBK "histone,histone modification,narrow histone mark" H3K9ac-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF810HED https://www.encodeproject.org/files/ENCFF810HED/@@download/ENCFF810HED.bam ENCFF732DCJ https://www.encodeproject.org/files/ENCFF732DCJ/@@download/ENCFF732DCJ.bam 45.9 M 0 44.7 M 0.974 SE 76 76 native 0.0 M 40.2 M 37.6 M 0.819 0.95 0.95 19.84 195 1.15 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad162f2d-be64-43ef-8bf6-c4119a1e92e7/@@download/cross_correlation_plot/ENCFF186KRB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB237KVV bradley-bernstein:DNA_Lib 5995 ENCFF186KRB HiSeq 2000 2017-01-05T00:22:52.783095+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F19358Q0369F2xJYJ4yKpQZf ENCSR945KBK https://www.encodeproject.org/experiments/ENCSR945KBK "histone,histone modification,narrow histone mark" H3K9ac-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF813OUT https://www.encodeproject.org/files/ENCFF813OUT/@@download/ENCFF813OUT.bam ENCFF777IAG https://www.encodeproject.org/files/ENCFF777IAG/@@download/ENCFF777IAG.bam 43.7 M 0 42.1 M 0.963 SE 76 76 native 0.0 M 38.2 M 35.2 M 0.804 0.92 0.93 14.76 255 1.21 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/955f2cdf-3ffd-482b-9d07-0b9a33770376/@@download/cross_correlation_plot/ENCFF741VWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB630BXV bradley-bernstein:DNA_Lib 5575 ENCFF741VWE HiSeq 2500 2016-12-15T20:31:11.873629+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1935JQ03698Gx0Y14BFPg08 ENCSR521GRK https://www.encodeproject.org/experiments/ENCSR521GRK "histone,histone modification,broad histone mark" H3K9me2-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF632JPV https://www.encodeproject.org/files/ENCFF632JPV/@@download/ENCFF632JPV.bam ENCFF140IHD https://www.encodeproject.org/files/ENCFF140IHD/@@download/ENCFF140IHD.bam 76.1 M 0 74.4 M 0.979 PE 76 76 native 31.7 M 0.0 M 30.7 M 0.808 0.97 0.97 30.91 200 1.05 11.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/60e1f36d-2e29-491b-8870-08bdee15d738/@@download/cross_correlation_plot/ENCFF076WXXENCFF531DKR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB544ZGY bradley-bernstein:DNA_Lib 6010 "ENCFF076WXX,ENCFF531DKR" HiSeq 2000 2016-11-24T17:38:47.208434+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xf8fj03696BZZPjG1pqvjV ENCSR521GRK https://www.encodeproject.org/experiments/ENCSR521GRK "histone,histone modification,broad histone mark" H3K9me2-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF374SLQ https://www.encodeproject.org/files/ENCFF374SLQ/@@download/ENCFF374SLQ.bam ENCFF515JGW https://www.encodeproject.org/files/ENCFF515JGW/@@download/ENCFF515JGW.bam 65.6 M 0 64.0 M 0.975 PE 76 76 native 27.3 M 0.0 M 23.9 M 0.729 0.88 0.87 7.78 190 1.06 22.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/57a945d6-2576-4a78-b9a8-0bbbcca8461b/@@download/cross_correlation_plot/ENCFF112DNAENCFF824IQO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB872UZU bradley-bernstein:DNA_Lib 6002 "ENCFF824IQO,ENCFF112DNA" HiSeq 2000 2016-11-24T17:30:24.566525+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xf8qj0369Jbb6fxbqJq7g5 ENCSR555TAX https://www.encodeproject.org/experiments/ENCSR555TAX "histone,histone modification,broad histone mark" H3K9me3-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF122GRI https://www.encodeproject.org/files/ENCFF122GRI/@@download/ENCFF122GRI.bam ENCFF701EBF https://www.encodeproject.org/files/ENCFF701EBF/@@download/ENCFF701EBF.bam 83.6 M 0 80.7 M 0.966 PE 76 76 native 33.4 M 0.0 M 32.8 M 0.784 0.98 0.98 48.31 180 1.06 6.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/0cc4e661-c1b6-45dd-94b8-5fa7a5c55a6b/@@download/cross_correlation_plot/ENCFF626WERENCFF057LOX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB180SLM bradley-bernstein:DNA_Lib 5998 "ENCFF626WER,ENCFF057LOX" HiSeq 2000 2017-01-06T22:16:01.335653+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfXpQ036945pqjGJ4QpPPk ENCSR555TAX https://www.encodeproject.org/experiments/ENCSR555TAX "histone,histone modification,broad histone mark" H3K9me3-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF585ATO https://www.encodeproject.org/files/ENCFF585ATO/@@download/ENCFF585ATO.bam ENCFF864KKX https://www.encodeproject.org/files/ENCFF864KKX/@@download/ENCFF864KKX.bam 46.0 M 0 44.6 M 0.969 PE 76 76 native 18.0 M 0.0 M 17.7 M 0.768 0.98 0.98 53.72 200 1.09 9.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/779c08ce-1941-4c46-8a4b-97ca531d778c/@@download/cross_correlation_plot/ENCFF782XVIENCFF342RQR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB745XIC bradley-bernstein:DNA_Lib 6007 "ENCFF342RQR,ENCFF782XVI" HiSeq 2000 2017-01-06T22:10:44.655195+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfY1j036984XkYP1yq4VKP ENCSR152YYY https://www.encodeproject.org/experiments/ENCSR152YYY "histone,histone modification,broad histone mark" H4K20me1-human PC-9 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF685YFB https://www.encodeproject.org/files/ENCFF685YFB/@@download/ENCFF685YFB.bam ENCFF506GLS https://www.encodeproject.org/files/ENCFF506GLS/@@download/ENCFF506GLS.bam 61.8 M 0 60.1 M 0.973 PE 76 76 native 25.7 M 0.0 M 24.9 M 0.807 0.97 0.97 31.59 170 1.07 16.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/096dbc5b-6511-44a8-b3a7-da1284253a39/@@download/cross_correlation_plot/ENCFF811SBAENCFF944JXZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB676BDU bradley-bernstein:DNA_Lib 5994 "ENCFF811SBA,ENCFF944JXZ" HiSeq 2000 2016-11-24T17:45:23.627316+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfX3j03697B6KjJ0vkYj62 ENCSR152YYY https://www.encodeproject.org/experiments/ENCSR152YYY "histone,histone modification,broad histone mark" H4K20me1-human PC-9 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF814MYQ https://www.encodeproject.org/files/ENCFF814MYQ/@@download/ENCFF814MYQ.bam ENCFF628MHY https://www.encodeproject.org/files/ENCFF628MHY/@@download/ENCFF628MHY.bam 63.3 M 0 62.1 M 0.981 PE 76 76 native 26.8 M 0.0 M 25.3 M 0.800 0.95 0.95 18.40 225 1.05 21.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c32dd81-de20-43d0-b006-4c84fb4da94f/@@download/cross_correlation_plot/ENCFF219YLTENCFF913EPU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB886VEE bradley-bernstein:DNA_Lib 6003 "ENCFF219YLT,ENCFF913EPU" HiSeq 2000 2016-11-24T17:39:18.164677+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfXBQ0369986BVPGZ1JZ2z ENCSR124GAS https://www.encodeproject.org/experiments/ENCSR124GAS control Control-human Peyer's patch tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF110BDU https://www.encodeproject.org/files/ENCFF110BDU/@@download/ENCFF110BDU.bam ENCFF781ZJA https://www.encodeproject.org/files/ENCFF781ZJA/@@download/ENCFF781ZJA.bam 65.1 M 0 62.8 M 0.965 SE 76 76 native 0.0 M 55.8 M 54.0 M 0.830 0.97 0.97 34.49 455 1.00 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/3bf1c1a5-19f0-42bf-b2b6-8b9bc6ad3f27/@@download/cross_correlation_plot/ENCFF183TQF-ENCFF544FLC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB382FTZ bradley-bernstein:DNA_Lib 8126 "ENCFF183TQF,ENCFF544FLC" HiSeq 2500 2016-10-27T22:03:05.836492+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091XK803691b327zxKB8j8y ENCSR837SGJ https://www.encodeproject.org/experiments/ENCSR837SGJ "histone,histone modification,narrow histone mark" H3K27ac-human Peyer's patch tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF632ZGH https://www.encodeproject.org/files/ENCFF632ZGH/@@download/ENCFF632ZGH.bam ENCFF502HDS https://www.encodeproject.org/files/ENCFF502HDS/@@download/ENCFF502HDS.bam 46.7 M 0 44.1 M 0.944 SE 76 76 native 0.0 M 40.6 M 36.2 M 0.776 0.89 0.90 10.55 200 1.32 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe3976b8-db6d-4c5b-aae0-1baed1979a43/@@download/cross_correlation_plot/ENCFF453DCW-ENCFF082JPG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB415JQU bradley-bernstein:DNA_Lib 8160 "ENCFF453DCW,ENCFF082JPG" HiSeq 2500 2016-10-31T13:22:22.275601+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8k380369PQyG3V5B45v5y ENCSR982PLJ https://www.encodeproject.org/experiments/ENCSR982PLJ "histone,histone modification,broad histone mark" H3K27me3-human Peyer's patch tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF337ODD https://www.encodeproject.org/files/ENCFF337ODD/@@download/ENCFF337ODD.bam ENCFF988INR https://www.encodeproject.org/files/ENCFF988INR/@@download/ENCFF988INR.bam 53.8 M 0 52.4 M 0.973 SE 76 76 native 0.0 M 46.6 M 43.9 M 0.816 0.94 0.95 18.26 205 1.00 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/216836a6-edc2-45f8-9fbb-511a6b484b7b/@@download/cross_correlation_plot/ENCFF641XDE-ENCFF897ROS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB075GJW bradley-bernstein:DNA_Lib 8176 "ENCFF641XDE,ENCFF897ROS" HiSeq 2500 2016-10-31T13:23:14.096797+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8jkj0369668063VP6bvX3 ENCSR363CJF https://www.encodeproject.org/experiments/ENCSR363CJF "histone,histone modification,broad histone mark" H3K36me3-human Peyer's patch tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF439TOT https://www.encodeproject.org/files/ENCFF439TOT/@@download/ENCFF439TOT.bam ENCFF934MPI https://www.encodeproject.org/files/ENCFF934MPI/@@download/ENCFF934MPI.bam 86.7 M 0 83.4 M 0.962 SE 76 76 native 0.0 M 73.8 M 69.1 M 0.797 0.94 0.94 16.21 100 1.00 0.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/e362371e-46f7-4f26-9edb-9bf11fed593d/@@download/cross_correlation_plot/ENCFF173IRO-ENCFF266KWC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB894AZQ bradley-bernstein:DNA_Lib 8190 "ENCFF173IRO,ENCFF266KWC" HiSeq 2500 2016-10-31T13:25:15.112092+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8k78036913377YJjkvgV5 ENCSR621BZD https://www.encodeproject.org/experiments/ENCSR621BZD "histone,histone modification,broad histone mark" H3K4me1-human Peyer's patch tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF226GNR https://www.encodeproject.org/files/ENCFF226GNR/@@download/ENCFF226GNR.bam ENCFF394QAL https://www.encodeproject.org/files/ENCFF394QAL/@@download/ENCFF394QAL.bam 128.8 M 0 124.6 M 0.968 SE 76 76 native 0.0 M 111.3 M 105.6 M 0.820 0.95 0.95 20.58 95 1.00 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/58a4fb1a-2f34-405a-afb3-e67a7f292865/@@download/cross_correlation_plot/ENCFF996QBF-ENCFF855FAQ-ENCFF517WPC-ENCFF462LWZ-ENCFF499ROY-ENCFF093JIA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB737BHF,ENCLB235MQE" "bradley-bernstein:DNA_Lib 8347,bradley-bernstein:DNA_Lib 8175" "ENCFF093JIA,ENCFF499ROY,ENCFF517WPC,ENCFF855FAQ,ENCFF996QBF,ENCFF462LWZ" HiSeq 2500 2017-01-27T16:52:20.872822+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25Jz5003690QKBV65qQ3p4k ENCSR878KIY https://www.encodeproject.org/experiments/ENCSR878KIY "histone,histone modification,narrow histone mark" H3K4me3-human Peyer's patch tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF333BJX https://www.encodeproject.org/files/ENCFF333BJX/@@download/ENCFF333BJX.bam ENCFF870NFI https://www.encodeproject.org/files/ENCFF870NFI/@@download/ENCFF870NFI.bam 52.1 M 0 50.4 M 0.968 SE 76 76 native 0.0 M 45.3 M 42.2 M 0.811 0.93 0.94 16.22 200 1.20 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/7667932d-f492-433e-9927-b6cf2d2c90ea/@@download/cross_correlation_plot/ENCFF846MLZ-ENCFF153OYB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119KKJ bradley-bernstein:DNA_Lib 8197 "ENCFF153OYB,ENCFF846MLZ" HiSeq 2500 2016-10-31T13:20:29.281724+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8vkj0369Bj2bF0JP9K9y5 ENCSR878KIY https://www.encodeproject.org/experiments/ENCSR878KIY "histone,histone modification,narrow histone mark" H3K4me3-human Peyer's patch tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF191JYD https://www.encodeproject.org/files/ENCFF191JYD/@@download/ENCFF191JYD.bam ENCFF118JMY https://www.encodeproject.org/files/ENCFF118JMY/@@download/ENCFF118JMY.bam 39.1 M 0 35.1 M 0.898 SE 76 76 native 0.0 M 31.2 M 28.3 M 0.722 0.91 0.91 11.49 190 1.32 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/bbc89514-6f91-45b0-8c02-8814711342ac/@@download/cross_correlation_plot/ENCFF753JZK-ENCFF536KEU-ENCFF270WDO-ENCFF481VUI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB805IMT bradley-bernstein:DNA_Lib 8159 "ENCFF536KEU,ENCFF753JZK,ENCFF270WDO,ENCFF481VUI" HiSeq 2500 2016-10-31T13:20:38.147047+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8vxj0369GJ6xQfbB7FjK7 ENCSR005UXZ https://www.encodeproject.org/experiments/ENCSR005UXZ "histone,histone modification,broad histone mark" H3K9me3-human Peyer's patch tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF935AGO https://www.encodeproject.org/files/ENCFF935AGO/@@download/ENCFF935AGO.bam ENCFF181NMY https://www.encodeproject.org/files/ENCFF181NMY/@@download/ENCFF181NMY.bam 58.3 M 0 56.3 M 0.966 SE 76 76 native 0.0 M 48.7 M 46.6 M 0.799 0.96 0.96 25.25 205 1.00 0.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c5218b2-9f7d-4e52-99cf-a3116fe366f5/@@download/cross_correlation_plot/ENCFF627IIW-ENCFF968VUA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB397XWC bradley-bernstein:DNA_Lib 8186 "ENCFF627IIW,ENCFF968VUA" HiSeq 2500 2016-10-31T13:23:16.984819+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8kFj0369Bj2bF0JP9K9vV ENCSR689ICI https://www.encodeproject.org/experiments/ENCSR689ICI control Control-human radial glial cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF405YHH https://www.encodeproject.org/files/ENCFF405YHH/@@download/ENCFF405YHH.bam ENCFF657IMK https://www.encodeproject.org/files/ENCFF657IMK/@@download/ENCFF657IMK.bam 49.8 M 0 47.4 M 0.952 SE 36 None 0.0 M 34.4 M 33.3 M 0.669 0.98 0.98 41.64 -5 1.01 0.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/68123bd4-7049-4482-9ad4-983e35350087/@@download/cross_correlation_plot/ENCFF359FCM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB784ZGZ bradley-bernstein:DNA_Lib 3838 ENCFF359FCM HiSeq 2000 2016-05-06T18:08:18.281096+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqXBj03692Fy2Pk02vGVYV ENCSR689ICI https://www.encodeproject.org/experiments/ENCSR689ICI control Control-human radial glial cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF197JML https://www.encodeproject.org/files/ENCFF197JML/@@download/ENCFF197JML.bam ENCFF912MQZ https://www.encodeproject.org/files/ENCFF912MQZ/@@download/ENCFF912MQZ.bam 54.9 M 0 53.0 M 0.965 SE "76,36" 36 36 0.0 M 41.2 M 39.5 M 0.719 0.97 0.97 34.76 180 1.01 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a432957-07fb-49a9-951c-5280defbd0ea/@@download/cross_correlation_plot/ENCFF662WJR-ENCFF947MSE-ENCFF826JDD_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB929VWI bradley-bernstein:DNA_Lib 5070 "ENCFF662WJR,ENCFF947MSE,ENCFF826JDD" HiSeq 2500 2016-11-08T04:08:12.825636+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJfJQ0369Fq9ppXVbB9KVv ENCSR829UDX https://www.encodeproject.org/experiments/ENCSR829UDX "histone,histone modification,narrow histone mark" H3K27ac-human radial glial cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF630FQE https://www.encodeproject.org/files/ENCFF630FQE/@@download/ENCFF630FQE.bam ENCFF820LGP https://www.encodeproject.org/files/ENCFF820LGP/@@download/ENCFF820LGP.bam 27.0 M 0 24.9 M 0.921 SE 36 36 native 0.0 M 19.5 M 17.0 M 0.629 0.88 0.88 8.44 250 1.03 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/f270f137-79a3-40aa-92ea-09a8507f67c7/@@download/cross_correlation_plot/ENCFF603MTX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB133LOH bradley-bernstein:DNA_Lib 3105 ENCFF603MTX HiSeq 2000 2016-11-08T04:15:13.168944+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJkJQ03696kxzJj982F8QQ ENCSR829UDX https://www.encodeproject.org/experiments/ENCSR829UDX "histone,histone modification,narrow histone mark" H3K27ac-human radial glial cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF370DAT https://www.encodeproject.org/files/ENCFF370DAT/@@download/ENCFF370DAT.bam ENCFF084JND https://www.encodeproject.org/files/ENCFF084JND/@@download/ENCFF084JND.bam 36.1 M 0 35.6 M 0.987 SE 76 36 36 0.0 M 29.7 M 25.1 M 0.696 0.84 0.84 6.32 190 1.19 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/f63fba14-bb51-4c07-b4aa-281ef199b727/@@download/cross_correlation_plot/ENCFF528SMK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB175WZV bradley-bernstein:DNA_Lib 6062 ENCFF528SMK HiSeq 2500 2016-11-08T04:13:31.687882+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJkZ803696kxzJj982F8Qq ENCSR787YMV https://www.encodeproject.org/experiments/ENCSR787YMV "histone,histone modification,broad histone mark" H3K27me3-human radial glial cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF414SWS https://www.encodeproject.org/files/ENCFF414SWS/@@download/ENCFF414SWS.bam ENCFF295SCK https://www.encodeproject.org/files/ENCFF295SCK/@@download/ENCFF295SCK.bam 24.0 M 0 20.9 M 0.870 SE 36 36 native 0.0 M 14.4 M 5.9 M 0.245 0.45 0.46 2.09 245 1.10 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/68b8a7d2-99dc-4261-b64a-3a376428fba7/@@download/cross_correlation_plot/ENCFF187XAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB009MTK bradley-bernstein:DNA_Lib 3124 ENCFF187XAN HiSeq 2000 2016-11-08T04:09:06.127893+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJg1803693Yx5pkGB3yXb8 ENCSR787YMV https://www.encodeproject.org/experiments/ENCSR787YMV "histone,histone modification,broad histone mark" H3K27me3-human radial glial cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF532OYU https://www.encodeproject.org/files/ENCFF532OYU/@@download/ENCFF532OYU.bam ENCFF789GKM https://www.encodeproject.org/files/ENCFF789GKM/@@download/ENCFF789GKM.bam 16.9 M 0 16.4 M 0.974 SE 36 36 native 0.0 M 13.0 M 3.3 M 0.198 0.40 0.41 1.82 205 1.05 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/098dfccc-6738-41bb-930a-c801a5918886/@@download/cross_correlation_plot/ENCFF452SFO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB587HVY bradley-bernstein:DNA_Lib 5042 ENCFF452SFO HiSeq 2500 2016-11-08T04:09:32.369472+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJg5Q03693Yx5pkGB3yXbV ENCSR136NUH https://www.encodeproject.org/experiments/ENCSR136NUH "histone,histone modification,broad histone mark" H3K36me3-human radial glial cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF070BRD https://www.encodeproject.org/files/ENCFF070BRD/@@download/ENCFF070BRD.bam ENCFF392WMC https://www.encodeproject.org/files/ENCFF392WMC/@@download/ENCFF392WMC.bam 25.8 M 0 22.7 M 0.881 SE 36 36 native 0.0 M 16.3 M 12.4 M 0.483 0.78 0.78 4.38 225 1.02 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/6dd0f53e-0ade-44a6-86d8-ac1557ae9716/@@download/cross_correlation_plot/ENCFF503GGH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB601QJE bradley-bernstein:DNA_Lib 3106 ENCFF503GGH HiSeq 2000 2016-11-08T04:10:43.908704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJgk0036959gx6j8B2zX8y ENCSR136NUH https://www.encodeproject.org/experiments/ENCSR136NUH "histone,histone modification,broad histone mark" H3K36me3-human radial glial cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF320TJG https://www.encodeproject.org/files/ENCFF320TJG/@@download/ENCFF320TJG.bam ENCFF529DRR https://www.encodeproject.org/files/ENCFF529DRR/@@download/ENCFF529DRR.bam 77.0 M 0 75.3 M 0.978 SE 36 36 native 0.0 M 57.6 M 36.5 M 0.474 0.71 0.71 3.44 180 1.01 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/111fdf9d-2176-48d6-a795-0c8eb884df2c/@@download/cross_correlation_plot/ENCFF731LBO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB460PBY bradley-bernstein:DNA_Lib 5046 ENCFF731LBO HiSeq 2500 2016-11-08T04:12:47.320622+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJgxj0369PbJv8fGB41yFp ENCSR279HKO https://www.encodeproject.org/experiments/ENCSR279HKO "histone,histone modification,broad histone mark" H3K4me1-human radial glial cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF198TLG https://www.encodeproject.org/files/ENCFF198TLG/@@download/ENCFF198TLG.bam ENCFF381OSH https://www.encodeproject.org/files/ENCFF381OSH/@@download/ENCFF381OSH.bam 31.0 M 0 28.6 M 0.922 SE 36 36 native 0.0 M 22.2 M 20.0 M 0.644 0.91 0.91 10.96 240 1.02 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c970ae9-4231-439c-9ea9-7e5a17afa96a/@@download/cross_correlation_plot/ENCFF893PTS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB682NTN bradley-bernstein:DNA_Lib 3102 ENCFF893PTS HiSeq 2000 2016-11-08T04:12:58.601790+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJjb00369KKKPy5vyxbYj1 ENCSR279HKO https://www.encodeproject.org/experiments/ENCSR279HKO "histone,histone modification,broad histone mark" H3K4me1-human radial glial cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF326RNQ https://www.encodeproject.org/files/ENCFF326RNQ/@@download/ENCFF326RNQ.bam ENCFF114IGX https://www.encodeproject.org/files/ENCFF114IGX/@@download/ENCFF114IGX.bam 66.5 M 0 65.1 M 0.978 SE 36 36 native 0.0 M 53.1 M 37.8 M 0.568 0.77 0.77 4.43 190 1.03 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/67f6a880-a315-4b32-88e7-6af6e51dfc08/@@download/cross_correlation_plot/ENCFF469IWB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB257MZJ bradley-bernstein:DNA_Lib 5045 ENCFF469IWB HiSeq 2500 2016-11-08T04:14:00.563401+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJjp00369P0J6bFv35kQY6 ENCSR433PUR https://www.encodeproject.org/experiments/ENCSR433PUR "histone,histone modification,narrow histone mark" H3K4me3-human radial glial cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF123VOV https://www.encodeproject.org/files/ENCFF123VOV/@@download/ENCFF123VOV.bam ENCFF538KTH https://www.encodeproject.org/files/ENCFF538KTH/@@download/ENCFF538KTH.bam 31.8 M 0 30.1 M 0.949 SE 36 36 native 0.0 M 21.4 M 20.8 M 0.656 0.98 0.98 53.34 195 1.17 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/d67ace7f-1091-4fdf-b4c9-7d5d8d2d2260/@@download/cross_correlation_plot/ENCFF997FJO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB425AMB bradley-bernstein:DNA_Lib 3832 ENCFF997FJO HiSeq 2000 2016-08-09T16:51:08.053305+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7bj036961kVYx02z56Gj ENCSR433PUR https://www.encodeproject.org/experiments/ENCSR433PUR "histone,histone modification,narrow histone mark" H3K4me3-human radial glial cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF463VYC https://www.encodeproject.org/files/ENCFF463VYC/@@download/ENCFF463VYC.bam ENCFF639BZH https://www.encodeproject.org/files/ENCFF639BZH/@@download/ENCFF639BZH.bam 75.2 M 0 73.6 M 0.979 SE 36 36 native 0.0 M 61.0 M 27.6 M 0.367 0.54 0.56 2.49 195 1.41 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ec70f69-0c8f-44b8-bfea-bda36ec1b2be/@@download/cross_correlation_plot/ENCFF300ISE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB382PBQ bradley-bernstein:DNA_Lib 5043 ENCFF300ISE HiSeq 2500 2016-08-09T16:51:55.907292+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7j803695yYyVq02XB4Xb ENCSR104BSN https://www.encodeproject.org/experiments/ENCSR104BSN "histone,histone modification,broad histone mark" H3K9me3-human radial glial cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF639IMC https://www.encodeproject.org/files/ENCFF639IMC/@@download/ENCFF639IMC.bam ENCFF392MSO https://www.encodeproject.org/files/ENCFF392MSO/@@download/ENCFF392MSO.bam 77.0 M 0 75.0 M 0.974 SE 36 36 native 0.0 M 52.0 M 20.8 M 0.270 0.49 0.50 2.24 215 1.02 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/89b96364-056d-4a05-9aa0-857466ef6a57/@@download/cross_correlation_plot/ENCFF187JWY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB376KNS bradley-bernstein:DNA_Lib 5044 ENCFF187JWY HiSeq 2500 2016-11-08T04:12:39.768095+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJjF00369K8J0zg025f381 ENCSR104BSN https://www.encodeproject.org/experiments/ENCSR104BSN "histone,histone modification,broad histone mark" H3K9me3-human radial glial cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF077VLZ https://www.encodeproject.org/files/ENCFF077VLZ/@@download/ENCFF077VLZ.bam ENCFF187EKM https://www.encodeproject.org/files/ENCFF187EKM/@@download/ENCFF187EKM.bam 23.9 M 0 22.7 M 0.951 SE 36 36 native 0.0 M 14.6 M 14.1 M 0.592 0.97 0.97 38.65 400 1.01 0.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f539449-d6a0-4dca-b08e-d3581b1c6781/@@download/cross_correlation_plot/ENCFF268OEO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB422OPG bradley-bernstein:DNA_Lib 3833 ENCFF268OEO HiSeq 2000 2016-11-08T04:11:49.910868+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0QJjP80369KKKPy5vyxbYgf ENCSR195BZZ https://www.encodeproject.org/experiments/ENCSR195BZZ control Control-human right atrium auricular region tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF524KQP https://www.encodeproject.org/files/ENCFF524KQP/@@download/ENCFF524KQP.bam ENCFF647HPQ https://www.encodeproject.org/files/ENCFF647HPQ/@@download/ENCFF647HPQ.bam 83.1 M 0 80.1 M 0.964 SE 76 76 native 0.0 M 70.9 M 68.0 M 0.819 0.97 0.98 41.94 245 1.00 0.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/de4fdb76-7e49-41d0-834c-9e504649404e/@@download/cross_correlation_plot/ENCFF151MTF-ENCFF483LFU-ENCFF208SWF-ENCFF503AXB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB326CHV,ENCLB267ERC" "bradley-bernstein:DNA_Lib 8224,bradley-bernstein:DNA_Lib 7943" "ENCFF151MTF,ENCFF503AXB,ENCFF208SWF,ENCFF483LFU" HiSeq 2500 2016-10-27T22:05:23.300790+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091X6j03694qqQFPkF02Ffz ENCSR593KDJ https://www.encodeproject.org/experiments/ENCSR593KDJ "histone,histone modification,narrow histone mark" H3K27ac-human right atrium auricular region tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF694SAM https://www.encodeproject.org/files/ENCFF694SAM/@@download/ENCFF694SAM.bam ENCFF206UXT https://www.encodeproject.org/files/ENCFF206UXT/@@download/ENCFF206UXT.bam 29.2 M 0 28.1 M 0.963 SE 76 76 native 0.0 M 26.5 M 24.4 M 0.834 0.92 0.92 12.86 220 1.28 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/c055377b-2359-467a-b6f9-80ca8fb1e2f3/@@download/cross_correlation_plot/ENCFF996SHZ-ENCFF231NGE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB611VQY bradley-bernstein:DNA_Lib 8063 "ENCFF231NGE,ENCFF996SHZ" HiSeq 2500 2016-10-31T13:22:04.638972+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8jFQ0369BgF5f15PFG8X3 ENCSR793PLF https://www.encodeproject.org/experiments/ENCSR793PLF "histone,histone modification,broad histone mark" H3K27me3-human right atrium auricular region tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF123VMN https://www.encodeproject.org/files/ENCFF123VMN/@@download/ENCFF123VMN.bam ENCFF474FFQ https://www.encodeproject.org/files/ENCFF474FFQ/@@download/ENCFF474FFQ.bam 83.0 M 0 80.2 M 0.966 SE 76 76 native 0.0 M 71.0 M 66.6 M 0.802 0.95 0.95 19.19 185 1.00 0.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8c4ac30-974b-4586-9036-bc8e846f388c/@@download/cross_correlation_plot/ENCFF675WEC-ENCFF727JNR-ENCFF852BPR-ENCFF350YRG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB341CVJ bradley-bernstein:DNA_Lib 8321 "ENCFF350YRG,ENCFF727JNR,ENCFF852BPR,ENCFF675WEC" HiSeq 2500 2017-01-25T04:39:05.187145+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23ygjQ036937yFgPVXB70ZK ENCSR967KZJ https://www.encodeproject.org/experiments/ENCSR967KZJ "histone,histone modification,broad histone mark" H3K36me3-human right atrium auricular region tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF282REJ https://www.encodeproject.org/files/ENCFF282REJ/@@download/ENCFF282REJ.bam ENCFF834MVK https://www.encodeproject.org/files/ENCFF834MVK/@@download/ENCFF834MVK.bam 68.1 M 0 65.5 M 0.961 SE 76 76 native 0.0 M 58.4 M 55.6 M 0.817 0.96 0.96 23.20 270 1.01 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/6aa7536c-baa8-4a51-9f90-3d4ef9e2655b/@@download/cross_correlation_plot/ENCFF693OMF-ENCFF372SWF-ENCFF761SBF-ENCFF398AWV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB868TGI bradley-bernstein:DNA_Lib 8074 "ENCFF372SWF,ENCFF693OMF,ENCFF761SBF,ENCFF398AWV" HiSeq 2500 2016-10-31T13:24:35.065058+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8j78036913377YJjkvgQ0 ENCSR368ORV https://www.encodeproject.org/experiments/ENCSR368ORV "histone,histone modification,broad histone mark" H3K4me1-human right atrium auricular region tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF086AJJ https://www.encodeproject.org/files/ENCFF086AJJ/@@download/ENCFF086AJJ.bam ENCFF600YEL https://www.encodeproject.org/files/ENCFF600YEL/@@download/ENCFF600YEL.bam 59.0 M 0 54.3 M 0.920 SE 76 76 native 0.0 M 48.4 M 46.3 M 0.785 0.97 0.97 31.17 135 1.00 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c550b6b-9640-4e3f-b68f-7dd738d76036/@@download/cross_correlation_plot/ENCFF326AID-ENCFF842SLU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB602MDC bradley-bernstein:DNA_Lib 8319 "ENCFF842SLU,ENCFF326AID" HiSeq 2500 2017-01-25T03:55:04.631337+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23yj1j03695ZBFgGYGy9jZF ENCSR791KFQ https://www.encodeproject.org/experiments/ENCSR791KFQ "histone,histone modification,narrow histone mark" H3K4me3-human right atrium auricular region tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF137GJU https://www.encodeproject.org/files/ENCFF137GJU/@@download/ENCFF137GJU.bam ENCFF488SVE https://www.encodeproject.org/files/ENCFF488SVE/@@download/ENCFF488SVE.bam 36.4 M 0 33.9 M 0.931 SE 76 76 native 0.0 M 30.8 M 28.9 M 0.793 0.95 0.95 21.77 180 1.41 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d84198d-b5ca-47aa-8925-810bebf5ba73/@@download/cross_correlation_plot/ENCFF078SMT-ENCFF070ARX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB089NUE bradley-bernstein:DNA_Lib 8320 "ENCFF070ARX,ENCFF078SMT" HiSeq 2500 2017-01-25T03:07:38.696002+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23ykz003695ZBFgGYGy9jb9 ENCSR276SJT https://www.encodeproject.org/experiments/ENCSR276SJT control Control-human right lobe of liver tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF823LEI https://www.encodeproject.org/files/ENCFF823LEI/@@download/ENCFF823LEI.bam ENCFF599PYA https://www.encodeproject.org/files/ENCFF599PYA/@@download/ENCFF599PYA.bam 50.3 M 0 48.8 M 0.970 SE 76 76 native 0.0 M 43.3 M 41.9 M 0.834 0.97 0.97 38.35 100 1.00 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/250f9ef6-7650-4f3e-984a-114b17a5c8e1/@@download/cross_correlation_plot/ENCFF614ETM-ENCFF996WJG-ENCFF351BDB-ENCFF154YCF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB365QEI bradley-bernstein:DNA_Lib 8118 "ENCFF996WJG,ENCFF351BDB,ENCFF614ETM,ENCFF154YCF" HiSeq 2500 2016-10-27T22:02:56.216157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091V0Q0369FvKVQXxFJjzFJ ENCSR981UJA https://www.encodeproject.org/experiments/ENCSR981UJA "histone,histone modification,narrow histone mark" H3K27ac-human right lobe of liver tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF435RWI https://www.encodeproject.org/files/ENCFF435RWI/@@download/ENCFF435RWI.bam ENCFF847JOG https://www.encodeproject.org/files/ENCFF847JOG/@@download/ENCFF847JOG.bam 44.3 M 0 42.6 M 0.960 SE 76 76 native 0.0 M 39.7 M 34.0 M 0.766 0.86 0.86 7.42 190 1.38 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa2ac700-14ed-4ace-b74c-1f69ede9b954/@@download/cross_correlation_plot/ENCFF740NTK-ENCFF931EZZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB754JNQ bradley-bernstein:DNA_Lib 8166 "ENCFF931EZZ,ENCFF740NTK" HiSeq 2500 2016-10-31T13:25:02.791996+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8Zk803698B80B4kPK27Gb ENCSR981UJA https://www.encodeproject.org/experiments/ENCSR981UJA "histone,histone modification,narrow histone mark" H3K27ac-human right lobe of liver tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF756TNK https://www.encodeproject.org/files/ENCFF756TNK/@@download/ENCFF756TNK.bam ENCFF462TLZ https://www.encodeproject.org/files/ENCFF462TLZ/@@download/ENCFF462TLZ.bam 20.6 M 0 20.1 M 0.977 SE 76 76 native 0.0 M 18.8 M 18.1 M 0.882 0.97 0.97 30.38 220 1.25 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/87f9fe20-4ff1-42e0-b2ce-64379339ae5c/@@download/cross_correlation_plot/ENCFF135NRF-ENCFF020LUU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB177YYO bradley-bernstein:DNA_Lib 8205 "ENCFF020LUU,ENCFF135NRF" HiSeq 2500 2016-11-15T17:18:42.986731+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b5QBj036945pqjGJ4Qq0zy ENCSR080QVO https://www.encodeproject.org/experiments/ENCSR080QVO "histone,histone modification,broad histone mark" H3K36me3-human right lobe of liver tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF610QGM https://www.encodeproject.org/files/ENCFF610QGM/@@download/ENCFF610QGM.bam ENCFF137NZO https://www.encodeproject.org/files/ENCFF137NZO/@@download/ENCFF137NZO.bam 60.0 M 0 55.6 M 0.927 SE 76 76 native 0.0 M 49.2 M 46.2 M 0.771 0.94 0.94 17.15 120 1.01 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9a8bc2b-d891-4f04-b715-d503947dbe70/@@download/cross_correlation_plot/ENCFF632FFI-ENCFF727PCJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB679IKV bradley-bernstein:DNA_Lib 8326 "ENCFF727PCJ,ENCFF632FFI" HiSeq 2500 2017-01-25T06:36:18.346984+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24126j03698YJb28y8YZ07Q ENCSR489DUV https://www.encodeproject.org/experiments/ENCSR489DUV "histone,histone modification,broad histone mark" H3K4me1-human right lobe of liver tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF114NVD https://www.encodeproject.org/files/ENCFF114NVD/@@download/ENCFF114NVD.bam ENCFF355VDB https://www.encodeproject.org/files/ENCFF355VDB/@@download/ENCFF355VDB.bam 58.6 M 0 53.5 M 0.913 SE 76 76 native 0.0 M 47.6 M 45.3 M 0.773 0.96 0.96 23.43 120 1.00 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ae0016b-7b35-4fa8-87b9-13c43c565ace/@@download/cross_correlation_plot/ENCFF303QQP-ENCFF846KJG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB791HNK bradley-bernstein:DNA_Lib 8324 "ENCFF846KJG,ENCFF303QQP" HiSeq 2500 2017-01-25T06:35:19.857979+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2412k00369192FJ8V9vk28V ENCSR344TLI https://www.encodeproject.org/experiments/ENCSR344TLI "histone,histone modification,narrow histone mark" H3K4me3-human right lobe of liver tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF188KCU https://www.encodeproject.org/files/ENCFF188KCU/@@download/ENCFF188KCU.bam ENCFF782CNJ https://www.encodeproject.org/files/ENCFF782CNJ/@@download/ENCFF782CNJ.bam 24.8 M 0 22.2 M 0.897 SE 76 76 native 0.0 M 19.7 M 17.4 M 0.701 0.88 0.88 8.51 190 1.50 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/46042e0d-f470-4894-854b-0edf6a0f1388/@@download/cross_correlation_plot/ENCFF538CJN-ENCFF164BFO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB333NQY bradley-bernstein:DNA_Lib 8165 "ENCFF164BFO,ENCFF538CJN" HiSeq 2500 2016-10-31T13:19:09.797682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8qV003695YX1xgJBKGGYb ENCSR344TLI https://www.encodeproject.org/experiments/ENCSR344TLI "histone,histone modification,narrow histone mark" H3K4me3-human right lobe of liver tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF842EPE https://www.encodeproject.org/files/ENCFF842EPE/@@download/ENCFF842EPE.bam ENCFF975RZW https://www.encodeproject.org/files/ENCFF975RZW/@@download/ENCFF975RZW.bam 50.2 M 0 48.1 M 0.959 SE 76 76 native 0.0 M 42.7 M 39.5 M 0.787 0.92 0.93 14.21 235 1.22 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/c64c4174-3459-47f3-8cc8-7b5ff8215878/@@download/cross_correlation_plot/ENCFF715KVW-ENCFF791EGJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB263CGX bradley-bernstein:DNA_Lib 8196 "ENCFF791EGJ,ENCFF715KVW" HiSeq 2500 2016-10-31T13:20:34.517836+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8qb00369P876f29P7Qb2k ENCSR614JFD https://www.encodeproject.org/experiments/ENCSR614JFD "histone,histone modification,broad histone mark" H3K9me3-human right lobe of liver tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF326OET https://www.encodeproject.org/files/ENCFF326OET/@@download/ENCFF326OET.bam ENCFF341JDC https://www.encodeproject.org/files/ENCFF341JDC/@@download/ENCFF341JDC.bam 57.8 M 0 52.0 M 0.900 SE 76 76 native 0.0 M 44.6 M 42.0 M 0.727 0.94 0.95 19.13 125 1.01 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/e512d12f-cd7f-433b-bc4a-0dd567de65d1/@@download/cross_correlation_plot/ENCFF474OAB-ENCFF074RQF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB198YHZ bradley-bernstein:DNA_Lib 8327 "ENCFF074RQF,ENCFF474OAB" HiSeq 2500 2017-01-25T06:24:48.808832+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24134Q0369GvZBq15z6X8bk ENCSR844YME https://www.encodeproject.org/experiments/ENCSR844YME control Control-human sigmoid colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF251KKG https://www.encodeproject.org/files/ENCFF251KKG/@@download/ENCFF251KKG.bam ENCFF762RDC https://www.encodeproject.org/files/ENCFF762RDC/@@download/ENCFF762RDC.bam 109.1 M 0 105.3 M 0.965 SE 76 76 native 0.0 M 93.5 M 90.7 M 0.832 0.97 0.97 37.01 1305 1.00 -4.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7f89b9c-29db-49bd-95bb-f15ccdedef9c/@@download/cross_correlation_plot/ENCFF923WIL-ENCFF904JEL-ENCFF202KOP-ENCFF339NXD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB132QZW,ENCLB828XIB" "bradley-bernstein:DNA_Lib 7945,bradley-bernstein:DNA_Lib 8225" "ENCFF904JEL,ENCFF202KOP,ENCFF339NXD,ENCFF923WIL" HiSeq 2500 2016-10-27T22:09:17.151240+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091XBj0369BqVfYq19ZBZQ9 ENCSR268ZCF https://www.encodeproject.org/experiments/ENCSR268ZCF "histone,histone modification,narrow histone mark" H3K27ac-human sigmoid colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF519GTX https://www.encodeproject.org/files/ENCFF519GTX/@@download/ENCFF519GTX.bam ENCFF282POX https://www.encodeproject.org/files/ENCFF282POX/@@download/ENCFF282POX.bam 32.0 M 0 30.7 M 0.958 SE 76 76 native 0.0 M 28.7 M 25.4 M 0.794 0.89 0.89 9.12 225 1.33 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/342e42f2-1fd9-45ef-b834-537c3fdf86f6/@@download/cross_correlation_plot/ENCFF847AST-ENCFF178GRO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB581BOD bradley-bernstein:DNA_Lib 8064 "ENCFF178GRO,ENCFF847AST" HiSeq 2500 2016-10-31T13:21:41.802274+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8jZQ036960kqK0JVbgbpj ENCSR150YAU https://www.encodeproject.org/experiments/ENCSR150YAU "histone,histone modification,broad histone mark" H3K36me3-human sigmoid colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF620VVM https://www.encodeproject.org/files/ENCFF620VVM/@@download/ENCFF620VVM.bam ENCFF267BDD https://www.encodeproject.org/files/ENCFF267BDD/@@download/ENCFF267BDD.bam 72.8 M 0 69.7 M 0.958 SE 76 76 native 0.0 M 61.9 M 60.2 M 0.828 0.97 0.98 40.57 100 1.00 0.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd938ef4-692a-4f42-a10d-62157ad536b7/@@download/cross_correlation_plot/ENCFF395FGV-ENCFF337ZJY-ENCFF023UMF-ENCFF117TYV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB331CFF bradley-bernstein:DNA_Lib 8082 "ENCFF337ZJY,ENCFF395FGV,ENCFF117TYV,ENCFF023UMF" HiSeq 2500 2016-10-31T13:26:05.120216+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8jQQ036913377YJjkvgQV ENCSR812POE https://www.encodeproject.org/experiments/ENCSR812POE "histone,histone modification,broad histone mark" H3K4me1-human sigmoid colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF230XFM https://www.encodeproject.org/files/ENCFF230XFM/@@download/ENCFF230XFM.bam ENCFF642CJV https://www.encodeproject.org/files/ENCFF642CJV/@@download/ENCFF642CJV.bam 51.0 M 0 47.5 M 0.931 SE 76 76 native 0.0 M 42.3 M 41.3 M 0.810 0.98 0.98 48.11 110 1.00 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d6c82a9-295d-4bd3-be19-c3eb0aec2cac/@@download/cross_correlation_plot/ENCFF293CDG-ENCFF290TCW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB492WEH bradley-bernstein:DNA_Lib 8315 "ENCFF290TCW,ENCFF293CDG" HiSeq 2500 2017-01-25T06:07:59.360145+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2410f80369GvZBq15z6X8Zg ENCSR900UIP https://www.encodeproject.org/experiments/ENCSR900UIP "histone,histone modification,narrow histone mark" H3K4me3-human sigmoid colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF910ICH https://www.encodeproject.org/files/ENCFF910ICH/@@download/ENCFF910ICH.bam ENCFF129KJF https://www.encodeproject.org/files/ENCFF129KJF/@@download/ENCFF129KJF.bam 49.2 M 0 46.4 M 0.944 SE 76 76 native 0.0 M 41.8 M 40.1 M 0.816 0.96 0.96 28.99 185 1.16 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ea59ec3-c417-4a0a-8e8f-c04e386c4f1f/@@download/cross_correlation_plot/ENCFF350DFV-ENCFF256EVO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB149DLQ bradley-bernstein:DNA_Lib 8316 "ENCFF350DFV,ENCFF256EVO" HiSeq 2500 2017-01-25T03:25:36.783136+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23yj7j03698k6J89757FQvV ENCSR682GOI https://www.encodeproject.org/experiments/ENCSR682GOI "histone,histone modification,broad histone mark" H3K9me3-human sigmoid colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF489PRK https://www.encodeproject.org/files/ENCFF489PRK/@@download/ENCFF489PRK.bam ENCFF835FRK https://www.encodeproject.org/files/ENCFF835FRK/@@download/ENCFF835FRK.bam 21.5 M 0 20.4 M 0.946 SE 76 76 native 0.0 M 17.8 M 17.5 M 0.813 0.98 0.98 58.86 105 1.01 0.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/fce7b698-f46b-4f48-84f6-63748892e835/@@download/cross_correlation_plot/ENCFF498WOY-ENCFF196JYC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB288ISF bradley-bernstein:DNA_Lib 8318 "ENCFF498WOY,ENCFF196JYC" HiSeq 2500 2017-01-25T04:36:33.151370+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24111j036948gp55VK04vVk ENCSR899XXQ https://www.encodeproject.org/experiments/ENCSR899XXQ control Control-human SK-N-MC immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF989JQG https://www.encodeproject.org/files/ENCFF989JQG/@@download/ENCFF989JQG.bam ENCFF131TJA https://www.encodeproject.org/files/ENCFF131TJA/@@download/ENCFF131TJA.bam 93.4 M 0 88.8 M 0.951 SE 36 None 0.0 M 68.4 M 50.0 M 0.535 0.75 0.75 3.87 155 1.01 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/18df88f9-468c-473c-b5c1-e67a65bdc0e4/@@download/cross_correlation_plot/ENCFF505NFA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB519PJY bradley-bernstein:DNA_Lib 2633 ENCFF505NFA HiSeq 2000 2016-05-06T18:05:52.222553+00:00 released unreviewed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqj5Q0369GkFPvq42zg1yx ENCSR835MMN https://www.encodeproject.org/experiments/ENCSR835MMN "histone,histone modification,narrow histone mark" H3K27ac-human SK-N-MC immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF864XGA https://www.encodeproject.org/files/ENCFF864XGA/@@download/ENCFF864XGA.bam ENCFF161ZDV https://www.encodeproject.org/files/ENCFF161ZDV/@@download/ENCFF161ZDV.bam 44.5 M 0 43.7 M 0.981 SE 76 36 36 0.0 M 36.6 M 33.5 M 0.753 0.92 0.92 12.62 165 1.16 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d070a10-a5d0-4a2c-a6a1-82e34cf5e28a/@@download/cross_correlation_plot/ENCFF066HPX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB020HPB bradley-bernstein:DNA_Lib 6055 ENCFF066HPX HiSeq 2000 2016-11-09T23:17:21.569250+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0V43pQ03693Yx5pkGB3yjGz ENCSR835MMN https://www.encodeproject.org/experiments/ENCSR835MMN "histone,histone modification,narrow histone mark" H3K27ac-human SK-N-MC immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF858LNL https://www.encodeproject.org/files/ENCFF858LNL/@@download/ENCFF858LNL.bam ENCFF771BMP https://www.encodeproject.org/files/ENCFF771BMP/@@download/ENCFF771BMP.bam 34.7 M 0 32.9 M 0.946 SE 76 36 36 0.0 M 26.4 M 25.5 M 0.733 0.97 0.97 30.65 210 1.10 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca4f57c0-cd1f-472d-b5cf-8f854d5f932a/@@download/cross_correlation_plot/ENCFF936KFD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB280GVZ bradley-bernstein:DNA_Lib 7096 ENCFF936KFD HiSeq 2500 2016-11-14T04:45:43.187298+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Y58X803694p2jjB4qqvg2Q ENCSR143HBU https://www.encodeproject.org/experiments/ENCSR143HBU "histone,histone modification,broad histone mark" H3K27me3-human SK-N-MC immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF225VKZ https://www.encodeproject.org/files/ENCFF225VKZ/@@download/ENCFF225VKZ.bam ENCFF570CSV https://www.encodeproject.org/files/ENCFF570CSV/@@download/ENCFF570CSV.bam 51.0 M 0 44.2 M 0.867 SE 36 36 native 0.0 M 33.8 M 12.3 M 0.240 0.40 0.45 2.30 180 1.04 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/65c3a639-67ee-465b-8e29-0d61961e7f7a/@@download/cross_correlation_plot/ENCFF002AWB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB657QHS bradley-bernstein:DNA_Lib 2173 ENCFF002AWB HiSeq 2000 2016-11-10T19:08:25.091974+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0VpQ280369JFf44yvVPGgq5 ENCSR143HBU https://www.encodeproject.org/experiments/ENCSR143HBU "histone,histone modification,broad histone mark" H3K27me3-human SK-N-MC immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF610HHK https://www.encodeproject.org/files/ENCFF610HHK/@@download/ENCFF610HHK.bam ENCFF550ZBY https://www.encodeproject.org/files/ENCFF550ZBY/@@download/ENCFF550ZBY.bam 36.6 M 0 34.6 M 0.947 SE 36 36 native 0.0 M 25.8 M 21.7 M 0.593 0.85 0.85 6.71 175 1.03 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/32d1a6b8-fa26-46b8-bb46-7680af879cac/@@download/cross_correlation_plot/ENCFF002AUO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB619AEK bradley-bernstein:DNA_Lib 3000 ENCFF002AUO HiSeq 2000 2016-11-10T19:08:52.230253+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0VpQ680369BZf5zj9kvB0vk ENCSR526PZM https://www.encodeproject.org/experiments/ENCSR526PZM "histone,histone modification,broad histone mark" H3K36me3-human SK-N-MC immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF779WOU https://www.encodeproject.org/files/ENCFF779WOU/@@download/ENCFF779WOU.bam ENCFF841MIG https://www.encodeproject.org/files/ENCFF841MIG/@@download/ENCFF841MIG.bam 30.9 M 0 29.5 M 0.956 SE 36 36 36 0.0 M 22.4 M 21.7 M 0.702 0.97 0.97 34.76 205 1.05 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/de09c233-1a4a-4c97-9e07-0cbbe71f88cb/@@download/cross_correlation_plot/ENCFF037CCV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB841KOB bradley-bernstein:DNA_Lib 2174 ENCFF037CCV HiSeq 2000 2016-11-10T19:01:02.380070+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0VpY3j03698fX4KbjY5jy8y ENCSR526PZM https://www.encodeproject.org/experiments/ENCSR526PZM "histone,histone modification,broad histone mark" H3K36me3-human SK-N-MC immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF748VHL https://www.encodeproject.org/files/ENCFF748VHL/@@download/ENCFF748VHL.bam ENCFF183SKI https://www.encodeproject.org/files/ENCFF183SKI/@@download/ENCFF183SKI.bam 67.6 M 0 66.2 M 0.979 SE 76 36 36 0.0 M 51.2 M 48.4 M 0.717 0.95 0.95 18.75 170 1.02 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/52113701-8dfa-4405-868c-3c6b252e1255/@@download/cross_correlation_plot/ENCFF963XTL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB306XER bradley-bernstein:DNA_Lib 5794 ENCFF963XTL HiSeq 2500 2016-11-10T19:01:35.892044+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0VpY7j0369835b654bK7yzg ENCSR152QRE https://www.encodeproject.org/experiments/ENCSR152QRE "histone,histone modification,broad histone mark" H3K4me1-human SK-N-MC immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF183BNX https://www.encodeproject.org/files/ENCFF183BNX/@@download/ENCFF183BNX.bam ENCFF596EOV https://www.encodeproject.org/files/ENCFF596EOV/@@download/ENCFF596EOV.bam 59.5 M 0 58.7 M 0.986 SE 76 36 36 0.0 M 48.7 M 46.2 M 0.777 0.95 0.95 19.23 195 1.04 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/85ed4123-6562-42e3-8336-d88edfc53c08/@@download/cross_correlation_plot/ENCFF857OJX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB568HLM bradley-bernstein:DNA_Lib 7094 ENCFF857OJX HiSeq 2500 2016-11-09T23:16:11.641758+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0V45Xj0369Fq9ppXVbB9gx2 ENCSR152QRE https://www.encodeproject.org/experiments/ENCSR152QRE "histone,histone modification,broad histone mark" H3K4me1-human SK-N-MC immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF487DEB https://www.encodeproject.org/files/ENCFF487DEB/@@download/ENCFF487DEB.bam ENCFF068VTP https://www.encodeproject.org/files/ENCFF068VTP/@@download/ENCFF068VTP.bam 53.1 M 0 52.1 M 0.980 SE 36 36 36 0.0 M 43.4 M 36.0 M 0.678 0.89 0.89 9.40 205 1.05 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/1539c3bd-428f-4edb-8d61-0d03e551f2da/@@download/cross_correlation_plot/ENCFF853VBM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB914AVX bradley-bernstein:DNA_Lib 4889 ENCFF853VBM HiSeq 2500 2016-11-09T23:16:33.658476+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0V45g80369Kq7bxQxpfjq6y ENCSR287VPM https://www.encodeproject.org/experiments/ENCSR287VPM "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-MC immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF434WOE https://www.encodeproject.org/files/ENCFF434WOE/@@download/ENCFF434WOE.bam ENCFF821PSR https://www.encodeproject.org/files/ENCFF821PSR/@@download/ENCFF821PSR.bam 58.2 M 0 57.1 M 0.980 SE 76 36 36 0.0 M 46.7 M 42.5 M 0.730 0.91 0.92 13.13 200 1.31 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d819c87-f5d5-4d82-98b2-79d662f28562/@@download/cross_correlation_plot/ENCFF723UTH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB333UZF bradley-bernstein:DNA_Lib 5793 ENCFF723UTH HiSeq 2000 2016-11-10T19:03:28.776909+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0VpX58036906YB5k4KJb8p8 ENCSR287VPM https://www.encodeproject.org/experiments/ENCSR287VPM "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-MC immortalized cell line 3 bradley-bernstein ENCODE3 GRCh38 ENCFF225SQI https://www.encodeproject.org/files/ENCFF225SQI/@@download/ENCFF225SQI.bam ENCFF284ZVF https://www.encodeproject.org/files/ENCFF284ZVF/@@download/ENCFF284ZVF.bam 46.5 M 0 45.7 M 0.984 SE 76 36 36 0.0 M 37.1 M 34.7 M 0.745 0.93 0.94 17.14 220 1.28 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/32d9a9df-020e-4782-8366-3356fe7ec07a/@@download/cross_correlation_plot/ENCFF168ZUS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB118XRD bradley-bernstein:DNA_Lib 7095 ENCFF168ZUS HiSeq 2500 2016-11-10T19:02:43.952213+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0VpX2Q03698fX4KbjY5jy7v ENCSR111QAW https://www.encodeproject.org/experiments/ENCSR111QAW "histone,histone modification,narrow histone mark" H3K9ac-human SK-N-MC immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF479THN https://www.encodeproject.org/files/ENCFF479THN/@@download/ENCFF479THN.bam ENCFF684YNW https://www.encodeproject.org/files/ENCFF684YNW/@@download/ENCFF684YNW.bam 41.8 M 0 39.8 M 0.953 SE 76 36 36 0.0 M 31.9 M 30.8 M 0.737 0.97 0.97 32.15 215 1.06 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/0b231913-2643-495c-ad97-169c0c6342df/@@download/cross_correlation_plot/ENCFF789WIJ-ENCFF991WJZ_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB361FKJ bradley-bernstein:DNA_Lib 7097 "ENCFF991WJZ,ENCFF789WIJ" HiSeq 2500 2016-11-14T04:46:53.868834+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Y58FQ03698PxP1Qj6z9XKv ENCSR111QAW https://www.encodeproject.org/experiments/ENCSR111QAW "histone,histone modification,narrow histone mark" H3K9ac-human SK-N-MC immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF276SMD https://www.encodeproject.org/files/ENCFF276SMD/@@download/ENCFF276SMD.bam ENCFF242GZE https://www.encodeproject.org/files/ENCFF242GZE/@@download/ENCFF242GZE.bam 37.4 M 0 36.3 M 0.971 SE 30 30 native 0.0 M 28.7 M 26.6 M 0.712 0.93 0.93 14.04 175 1.14 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c58bc51-1279-4373-aa49-3fc417202a2a/@@download/cross_correlation_plot/ENCFF839LHC-ENCFF092ETJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB338VPC bradley-bernstein:DNA_Lib 6054 "ENCFF839LHC,ENCFF092ETJ" HiSeq 2500 2017-01-31T21:00:39.052933+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28FKvQ0369FYfK85ZjQ4k53 ENCSR679CHH https://www.encodeproject.org/experiments/ENCSR679CHH "histone,histone modification,broad histone mark" H3K9me3-human SK-N-MC immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF121YVB https://www.encodeproject.org/files/ENCFF121YVB/@@download/ENCFF121YVB.bam ENCFF291DJJ https://www.encodeproject.org/files/ENCFF291DJJ/@@download/ENCFF291DJJ.bam 36.3 M 0 35.7 M 0.985 SE 76 36 36 0.0 M 25.4 M 24.6 M 0.679 0.97 0.97 32.95 180 1.01 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/b32d8b32-cd40-4135-b32c-56099cb10230/@@download/cross_correlation_plot/ENCFF908ZIO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB883BJL bradley-bernstein:DNA_Lib 5797 ENCFF908ZIO HiSeq 2000 2016-11-10T19:07:20.522964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0VpPK003697PgyJFQzzjFyp ENCSR679CHH https://www.encodeproject.org/experiments/ENCSR679CHH "histone,histone modification,broad histone mark" H3K9me3-human SK-N-MC immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF275SHZ https://www.encodeproject.org/files/ENCFF275SHZ/@@download/ENCFF275SHZ.bam ENCFF441CEV https://www.encodeproject.org/files/ENCFF441CEV/@@download/ENCFF441CEV.bam 47.3 M 0 44.5 M 0.941 SE 36 36 36 0.0 M 32.9 M 17.5 M 0.370 0.56 0.57 2.50 160 1.03 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad999827-052b-4934-ae35-ce97a6f45b43/@@download/cross_correlation_plot/ENCFF361VEE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB755ECL bradley-bernstein:DNA_Lib 2176 ENCFF361VEE HiSeq 2000 2016-11-10T19:07:35.081006+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0VpPVj03693jz1qpV5QxQQb ENCSR185OHN https://www.encodeproject.org/experiments/ENCSR185OHN control Control-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF497JDI https://www.encodeproject.org/files/ENCFF497JDI/@@download/ENCFF497JDI.bam ENCFF245WUM https://www.encodeproject.org/files/ENCFF245WUM/@@download/ENCFF245WUM.bam 104.1 M 0 100.9 M 0.970 PE 76 76 native 42.9 M 0.0 M 39.8 M 0.766 0.93 0.93 13.81 175 1.05 6.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb1cc12a-8cc0-4862-91dc-6cc3f178ada3/@@download/cross_correlation_plot/ENCFF615LEB-ENCFF458ASE_pooledENCFF072EIX-ENCFF443LZC_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB339LAI bradley-bernstein:DNA_Lib 3767 "ENCFF615LEB,ENCFF458ASE,ENCFF443LZC,ENCFF072EIX" HiSeq 2500 2016-10-13T16:42:29.133887+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzz8Yq803695X31FJbKv10f5 ENCSR185OHN https://www.encodeproject.org/experiments/ENCSR185OHN control Control-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF614ONL https://www.encodeproject.org/files/ENCFF614ONL/@@download/ENCFF614ONL.bam ENCFF470NFL https://www.encodeproject.org/files/ENCFF470NFL/@@download/ENCFF470NFL.bam 52.0 M 0 50.1 M 0.962 SE 76 76 native 0.0 M 44.0 M 41.0 M 0.788 0.94 0.94 15.68 190 1.01 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1c5bfea-ce97-4b5e-b1e2-75938560e83f/@@download/cross_correlation_plot/ENCFF615LEB-ENCFF458ASE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB339LAI bradley-bernstein:DNA_Lib 3767 "ENCFF615LEB,ENCFF458ASE" HiSeq 2500 2017-01-09T19:42:16.374139+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kq50j0369925x4JGkJQyby ENCSR185OHN https://www.encodeproject.org/experiments/ENCSR185OHN control Control-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF171MQP https://www.encodeproject.org/files/ENCFF171MQP/@@download/ENCFF171MQP.bam ENCFF841ELU https://www.encodeproject.org/files/ENCFF841ELU/@@download/ENCFF841ELU.bam 82.6 M 0 78.9 M 0.955 SE 76 76 native 0.0 M 68.7 M 66.3 M 0.803 0.97 0.97 39.60 180 1.01 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/67216c9c-ab42-4fc5-8758-62e3f276661a/@@download/cross_correlation_plot/ENCFF625FBR-ENCFF878ZLP_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB134GES bradley-bernstein:DNA_Lib 7116 "ENCFF625FBR,ENCFF878ZLP" HiSeq 2500 2017-01-10T14:55:14.261220+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1kq5600369JkK9k82Q68zK3 ENCSR185OHN https://www.encodeproject.org/experiments/ENCSR185OHN control Control-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF959FMO https://www.encodeproject.org/files/ENCFF959FMO/@@download/ENCFF959FMO.bam ENCFF076JCA https://www.encodeproject.org/files/ENCFF076JCA/@@download/ENCFF076JCA.bam 165.2 M 0 159.2 M 0.964 PE 76 76 native 67.1 M 0.0 M 65.6 M 0.794 0.98 0.98 47.02 165 1.03 9.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/041323cb-31bc-47d1-a308-6f64c4745ee1/@@download/cross_correlation_plot/ENCFF625FBR-ENCFF878ZLP_pooledENCFF591CAT-ENCFF269SMY_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB134GES bradley-bernstein:DNA_Lib 7116 "ENCFF625FBR,ENCFF878ZLP,ENCFF269SMY,ENCFF591CAT" HiSeq 2500 2016-10-13T16:47:51.273109+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzz8Z6003694V4kXZJPGgZGy ENCSR297MUV https://www.encodeproject.org/experiments/ENCSR297MUV "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF552IZN https://www.encodeproject.org/files/ENCFF552IZN/@@download/ENCFF552IZN.bam ENCFF171OSV https://www.encodeproject.org/files/ENCFF171OSV/@@download/ENCFF171OSV.bam 22.6 M 0 22.0 M 0.972 SE 76 76 native 0.0 M 19.3 M 12.2 M 0.537 0.67 0.66 2.85 200 1.04 2.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/df2f9c64-383a-4691-a787-ef366f36280f/@@download/cross_correlation_plot/ENCFF971UJG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB470MXD bradley-bernstein:DNA_Lib 6800 ENCFF971UJG HiSeq 2500 2016-11-25T07:43:23.738860+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qpxj00369BPZf625V8vpPF ENCSR297MUV https://www.encodeproject.org/experiments/ENCSR297MUV "other post-translational modification,transcription factor,chromatin remodeller" EZH2phosphoT487-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF909EAW https://www.encodeproject.org/files/ENCFF909EAW/@@download/ENCFF909EAW.bam ENCFF385HYG https://www.encodeproject.org/files/ENCFF385HYG/@@download/ENCFF385HYG.bam 56.7 M 0 52.6 M 0.929 SE 76 76 native 0.0 M 45.9 M 39.2 M 0.693 0.86 0.85 6.65 190 1.01 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c0cadff-5b06-4a61-8b01-2327761b22ae/@@download/cross_correlation_plot/ENCFF068DPU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB953MHE bradley-bernstein:DNA_Lib 6951 ENCFF068DPU HiSeq 2500 2016-12-15T20:19:13.954495+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F193PVj0369KFQ14F3P0Yzbz ENCSR366QMB https://www.encodeproject.org/experiments/ENCSR366QMB "histone,histone modification,narrow histone mark" H2AFZ-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF747FRK https://www.encodeproject.org/files/ENCFF747FRK/@@download/ENCFF747FRK.bam ENCFF202MDV https://www.encodeproject.org/files/ENCFF202MDV/@@download/ENCFF202MDV.bam 63.2 M 0 62.0 M 0.981 PE 76 76 native 27.2 M 0.0 M 25.8 M 0.818 0.95 0.95 19.41 175 1.09 5.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/3872727f-72a0-4e5f-a4cc-c7f36e54f767/@@download/cross_correlation_plot/ENCFF249QLDENCFF808YDD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB883UOQ bradley-bernstein:DNA_Lib 6544 "ENCFF249QLD,ENCFF808YDD" HiSeq 2500 2016-10-12T19:11:00.441368+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygPF803690Gj8J813yjkkF ENCSR366QMB https://www.encodeproject.org/experiments/ENCSR366QMB "histone,histone modification,narrow histone mark" H2AFZ-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF441RNP https://www.encodeproject.org/files/ENCFF441RNP/@@download/ENCFF441RNP.bam ENCFF083DPO https://www.encodeproject.org/files/ENCFF083DPO/@@download/ENCFF083DPO.bam 33.4 M 0 32.6 M 0.977 PE 76 76 native 14.3 M 0.0 M 12.5 M 0.749 0.87 0.87 7.79 195 1.16 10.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/9aa5d016-6d36-47c0-91ee-d1fa16d691cd/@@download/cross_correlation_plot/ENCFF689OJEENCFF205YQQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB622BSD bradley-bernstein:DNA_Lib 6796 "ENCFF205YQQ,ENCFF689OJE" HiSeq 2500 2016-10-12T19:08:53.252340+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygPKQ0369JyjGgF5Kg48Jx ENCSR125IJY https://www.encodeproject.org/experiments/ENCSR125IJY "histone,histone modification,broad histone mark" H3F3A-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF388BGC https://www.encodeproject.org/files/ENCFF388BGC/@@download/ENCFF388BGC.bam ENCFF982FBU https://www.encodeproject.org/files/ENCFF982FBU/@@download/ENCFF982FBU.bam 63.3 M 0 60.4 M 0.954 PE 76 76 native 24.8 M 0.0 M 22.9 M 0.723 0.92 0.92 12.76 205 1.08 6.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e348144-4f9b-4b14-ab0d-c7d13a32edff/@@download/cross_correlation_plot/ENCFF943CJPENCFF615GTY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB937LHB bradley-bernstein:DNA_Lib 6545 "ENCFF943CJP,ENCFF615GTY" HiSeq 2000 2016-10-12T17:02:17.156743+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzybyfQ036967Vxqv5Vy8gKz ENCSR125IJY https://www.encodeproject.org/experiments/ENCSR125IJY "histone,histone modification,broad histone mark" H3F3A-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF159OCG https://www.encodeproject.org/files/ENCFF159OCG/@@download/ENCFF159OCG.bam ENCFF534IJY https://www.encodeproject.org/files/ENCFF534IJY/@@download/ENCFF534IJY.bam 60.0 M 0 58.3 M 0.972 PE 76 76 native 24.9 M 0.0 M 22.5 M 0.750 0.90 0.90 9.95 210 1.09 9.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/501be0c6-c3ad-43cc-ba1d-826e4e8eb5b9/@@download/cross_correlation_plot/ENCFF007KCCENCFF141CVI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB219ECM bradley-bernstein:DNA_Lib 6801 "ENCFF141CVI,ENCFF007KCC" HiSeq 2500 2016-10-12T17:01:19.864964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bzybyqj036944KPz21xGFQjv ENCSR564IGJ https://www.encodeproject.org/experiments/ENCSR564IGJ "histone,histone modification,narrow histone mark" H3K27ac-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF380OTV https://www.encodeproject.org/files/ENCFF380OTV/@@download/ENCFF380OTV.bam ENCFF454FHC https://www.encodeproject.org/files/ENCFF454FHC/@@download/ENCFF454FHC.bam 41.0 M 0 40.0 M 0.977 PE 76 76 native 17.9 M 0.0 M 15.0 M 0.733 0.84 0.83 5.83 195 1.36 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/307c5199-34b6-45e3-9eb9-1341cb6ff138/@@download/cross_correlation_plot/ENCFF168JIXENCFF385BZZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB477OQI bradley-bernstein:DNA_Lib 6794 "ENCFF168JIX,ENCFF385BZZ" HiSeq 2500 2016-10-12T19:07:35.533921+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygP6003690Gj8J813yjkk1 ENCSR564IGJ https://www.encodeproject.org/experiments/ENCSR564IGJ "histone,histone modification,narrow histone mark" H3K27ac-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF775DHW https://www.encodeproject.org/files/ENCFF775DHW/@@download/ENCFF775DHW.bam ENCFF132YLR https://www.encodeproject.org/files/ENCFF132YLR/@@download/ENCFF132YLR.bam 61.9 M 0 59.1 M 0.955 PE 76 76 native 25.8 M 0.0 M 25.0 M 0.808 0.97 0.97 33.39 250 1.61 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/520badd4-64ac-4a73-ac48-7d9f8fe9d142/@@download/cross_correlation_plot/ENCFF254NPSENCFF521UZO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB208JNZ bradley-bernstein:DNA_Lib 6543 "ENCFF521UZO,ENCFF254NPS" HiSeq 2000 2016-10-12T19:09:44.795092+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygPGQ03695X31FJbKv0pZy ENCSR914QOK https://www.encodeproject.org/experiments/ENCSR914QOK "histone,histone modification,broad histone mark" H3K27me3-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF897EXE https://www.encodeproject.org/files/ENCFF897EXE/@@download/ENCFF897EXE.bam ENCFF038QKO https://www.encodeproject.org/files/ENCFF038QKO/@@download/ENCFF038QKO.bam 34.6 M 0 33.4 M 0.965 SE 76 76 native 0.0 M 29.4 M 28.0 M 0.808 0.95 0.95 20.63 200 1.01 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/f927c291-8c11-47f1-aec5-44eb84808272/@@download/cross_correlation_plot/ENCFF557DAH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB891ZOW bradley-bernstein:DNA_Lib 5597 ENCFF557DAH HiSeq 2500 2016-12-14T22:50:27.908251+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1885Y003693Bb8J2B4yy2Q0 ENCSR914QOK https://www.encodeproject.org/experiments/ENCSR914QOK "histone,histone modification,broad histone mark" H3K27me3-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF690PRE https://www.encodeproject.org/files/ENCFF690PRE/@@download/ENCFF690PRE.bam ENCFF775WYG https://www.encodeproject.org/files/ENCFF775WYG/@@download/ENCFF775WYG.bam 14.9 M 0 14.5 M 0.977 SE 76 76 native 0.0 M 12.7 M 12.1 M 0.813 0.96 0.96 24.68 300 1.02 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bdfa628-c754-4b52-b589-c4f53e64659d/@@download/cross_correlation_plot/ENCFF968XEI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB056AOW bradley-bernstein:DNA_Lib 6816 ENCFF968XEI HiSeq 2500 2016-12-14T22:49:49.857029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1885kj0369F00q32BFF7494 ENCSR978CNH https://www.encodeproject.org/experiments/ENCSR978CNH "histone,histone modification,broad histone mark" H3K36me3-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF665FGA https://www.encodeproject.org/files/ENCFF665FGA/@@download/ENCFF665FGA.bam ENCFF800WNT https://www.encodeproject.org/files/ENCFF800WNT/@@download/ENCFF800WNT.bam 67.4 M 0 66.0 M 0.979 PE 76 76 native 28.4 M 0.0 M 27.5 M 0.816 0.97 0.97 30.74 180 1.06 11.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/b915873e-aeea-4358-9787-ad8be8d037dc/@@download/cross_correlation_plot/ENCFF746KLIENCFF775HCY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB471YFP bradley-bernstein:DNA_Lib 6550 "ENCFF746KLI,ENCFF775HCY" HiSeq 2500 2016-10-12T19:05:44.570285+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygJg803691G5B5kQKJ2jjK ENCSR978CNH https://www.encodeproject.org/experiments/ENCSR978CNH "histone,histone modification,broad histone mark" H3K36me3-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF488ETS https://www.encodeproject.org/files/ENCFF488ETS/@@download/ENCFF488ETS.bam ENCFF438AQE https://www.encodeproject.org/files/ENCFF438AQE/@@download/ENCFF438AQE.bam 59.1 M 0 56.3 M 0.952 PE 76 76 native 23.2 M 0.0 M 21.1 M 0.715 0.91 0.91 11.00 210 1.08 9.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6ccc0fa-1667-4825-8be8-6dfc2d772941/@@download/cross_correlation_plot/ENCFF805WOHENCFF223YYU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB691SDO bradley-bernstein:DNA_Lib 6555 "ENCFF223YYU,ENCFF805WOH" HiSeq 2000 2016-10-12T19:02:40.781396+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygJz003690Gj8J813yjkj0 ENCSR661BMA https://www.encodeproject.org/experiments/ENCSR661BMA "histone,histone modification,broad histone mark" H3K4me1-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF038HKS https://www.encodeproject.org/files/ENCFF038HKS/@@download/ENCFF038HKS.bam ENCFF037UBO https://www.encodeproject.org/files/ENCFF037UBO/@@download/ENCFF037UBO.bam 52.8 M 0 51.5 M 0.976 SE 76 76 native 0.0 M 46.6 M 43.4 M 0.823 0.94 0.94 17.15 230 1.02 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5ac2629-8a97-4024-b4e3-a0537298e537/@@download/cross_correlation_plot/ENCFF436WIU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB033YFV bradley-bernstein:DNA_Lib 6813 ENCFF436WIU HiSeq 2500 2016-11-25T07:45:26.361109+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qpgGQ036970Gy1vVJYXgyX ENCSR661BMA https://www.encodeproject.org/experiments/ENCSR661BMA "histone,histone modification,broad histone mark" H3K4me1-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF496EAA https://www.encodeproject.org/files/ENCFF496EAA/@@download/ENCFF496EAA.bam ENCFF880KBO https://www.encodeproject.org/files/ENCFF880KBO/@@download/ENCFF880KBO.bam 41.8 M 0 39.8 M 0.952 SE 76 76 native 0.0 M 35.5 M 33.1 M 0.790 0.93 0.93 14.75 210 1.02 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/f03550ca-5766-417b-bf86-eaa2db35827a/@@download/cross_correlation_plot/ENCFF005JXT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB440NYM bradley-bernstein:DNA_Lib 5593 ENCFF005JXT HiSeq 2500 2016-11-26T01:27:10.334098+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08Qz400369KxbFbzV9pxGQz ENCSR791INM https://www.encodeproject.org/experiments/ENCSR791INM "histone,histone modification,narrow histone mark" H3K4me2-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF225ZIN https://www.encodeproject.org/files/ENCFF225ZIN/@@download/ENCFF225ZIN.bam ENCFF128FDP https://www.encodeproject.org/files/ENCFF128FDP/@@download/ENCFF128FDP.bam 44.9 M 0 43.0 M 0.956 SE 76 76 native 0.0 M 38.8 M 35.8 M 0.797 0.92 0.92 13.32 230 1.08 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/83033855-1b1a-4d7d-9ca7-b6a64bcad404/@@download/cross_correlation_plot/ENCFF215QAT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB330VVP bradley-bernstein:DNA_Lib 5595 ENCFF215QAT HiSeq 2500 2016-11-24T17:19:14.671783+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08Qz8803691g9pQQ5g19xp3 ENCSR791INM https://www.encodeproject.org/experiments/ENCSR791INM "histone,histone modification,narrow histone mark" H3K4me2-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF879JTO https://www.encodeproject.org/files/ENCFF879JTO/@@download/ENCFF879JTO.bam ENCFF045FJS https://www.encodeproject.org/files/ENCFF045FJS/@@download/ENCFF045FJS.bam 27.0 M 0 26.4 M 0.977 SE 76 76 native 0.0 M 23.6 M 22.9 M 0.849 0.97 0.97 38.37 275 1.05 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/b02483ac-bba6-4b85-9150-c36ca1547238/@@download/cross_correlation_plot/ENCFF256JRU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB195XWK bradley-bernstein:DNA_Lib 6814 ENCFF256JRU HiSeq 2500 2016-11-25T07:43:42.934446+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qpf3Q0369052Y839VPkQk3 ENCSR975GZA https://www.encodeproject.org/experiments/ENCSR975GZA "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF245RXP https://www.encodeproject.org/files/ENCFF245RXP/@@download/ENCFF245RXP.bam ENCFF671CQT https://www.encodeproject.org/files/ENCFF671CQT/@@download/ENCFF671CQT.bam 33.6 M 0 32.5 M 0.966 PE 76 76 native 14.0 M 0.0 M 13.6 M 0.810 0.97 0.97 32.91 200 1.28 2.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/a98f8433-aca7-489c-9edf-07740adc09c0/@@download/cross_correlation_plot/ENCFF768AIXENCFF694EZB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB257LFP bradley-bernstein:DNA_Lib 5596 "ENCFF694EZB,ENCFF768AIX" HiSeq 2500 2016-10-12T19:08:34.093709+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygKVj03694QkpYgJP3gf8P ENCSR975GZA https://www.encodeproject.org/experiments/ENCSR975GZA "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF027SGQ https://www.encodeproject.org/files/ENCFF027SGQ/@@download/ENCFF027SGQ.bam ENCFF667SDO https://www.encodeproject.org/files/ENCFF667SDO/@@download/ENCFF667SDO.bam 47.4 M 0 46.3 M 0.976 PE 76 76 native 20.1 M 0.0 M 19.6 M 0.826 0.98 0.98 42.73 235 1.12 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/64004863-bde9-439b-b98c-22fcae5a5a0e/@@download/cross_correlation_plot/ENCFF930ROBENCFF625BKT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB810UPC bradley-bernstein:DNA_Lib 6815 "ENCFF930ROB,ENCFF625BKT" HiSeq 2500 2016-10-12T19:07:18.529220+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygKf803694QkpYgJP3gf8p ENCSR074TRC https://www.encodeproject.org/experiments/ENCSR074TRC "histone,histone modification,broad histone mark" H3K79me2-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF388DSF https://www.encodeproject.org/files/ENCFF388DSF/@@download/ENCFF388DSF.bam ENCFF208YVE https://www.encodeproject.org/files/ENCFF208YVE/@@download/ENCFF208YVE.bam 69.3 M 0 67.8 M 0.979 PE 76 76 native 30.0 M 0.0 M 29.2 M 0.843 0.97 0.97 36.13 185 1.08 8.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/4650920f-45cc-4c9a-9edf-ba3a8b9b3715/@@download/cross_correlation_plot/ENCFF399IUTENCFF818RQF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB375XUA bradley-bernstein:DNA_Lib 6553 "ENCFF399IUT,ENCFF818RQF" HiSeq 2500 2016-10-12T18:54:38.916902+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygJVj0369BZb2FyGKFk7jK ENCSR074TRC https://www.encodeproject.org/experiments/ENCSR074TRC "histone,histone modification,broad histone mark" H3K79me2-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF921IYR https://www.encodeproject.org/files/ENCFF921IYR/@@download/ENCFF921IYR.bam ENCFF837YUA https://www.encodeproject.org/files/ENCFF837YUA/@@download/ENCFF837YUA.bam 24.2 M 0 23.6 M 0.978 PE 76 76 native 10.4 M 0.0 M 9.3 M 0.768 0.89 0.89 8.99 200 1.19 12.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/e706fa36-92e6-4931-badf-b8fbc30415ee/@@download/cross_correlation_plot/ENCFF873WJQENCFF407HIZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB104CEU bradley-bernstein:DNA_Lib 6797 "ENCFF407HIZ,ENCFF873WJQ" HiSeq 2500 2016-10-12T18:49:34.133894+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzygJbQ0369BXpF7zZK38Q35 ENCSR121INC https://www.encodeproject.org/experiments/ENCSR121INC "histone,histone modification,narrow histone mark" H3K9ac-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF767RYS https://www.encodeproject.org/files/ENCFF767RYS/@@download/ENCFF767RYS.bam ENCFF264VAS https://www.encodeproject.org/files/ENCFF264VAS/@@download/ENCFF264VAS.bam 43.5 M 0 42.2 M 0.970 SE 76 76 native 0.0 M 38.6 M 34.9 M 0.802 0.91 0.91 11.48 220 1.18 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/2abfab18-c453-4f20-a7c8-ed1e473e00c3/@@download/cross_correlation_plot/ENCFF949RTE-ENCFF838MJT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB442NJI bradley-bernstein:DNA_Lib 7016 "ENCFF838MJT,ENCFF949RTE" HiSeq 2500 2016-12-15T10:41:41.814823+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1930Y803698Gx0Y14BFPfz0 ENCSR121INC https://www.encodeproject.org/experiments/ENCSR121INC "histone,histone modification,narrow histone mark" H3K9ac-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF469XZX https://www.encodeproject.org/files/ENCFF469XZX/@@download/ENCFF469XZX.bam ENCFF377SER https://www.encodeproject.org/files/ENCFF377SER/@@download/ENCFF377SER.bam 33.4 M 0 32.5 M 0.971 SE 76 76 native 0.0 M 28.7 M 28.1 M 0.840 0.98 0.98 55.25 225 1.03 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/02c25472-8232-4032-a381-dd4bfe85263d/@@download/cross_correlation_plot/ENCFF281SFT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB463NVD bradley-bernstein:DNA_Lib 6950 ENCFF281SFT HiSeq 2500 2017-01-05T00:22:09.401613+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1930jj03698Gx0Y14BFPfz9 ENCSR423UOT https://www.encodeproject.org/experiments/ENCSR423UOT "histone,histone modification,broad histone mark" H3K9me2-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF736XHX https://www.encodeproject.org/files/ENCFF736XHX/@@download/ENCFF736XHX.bam ENCFF714CMB https://www.encodeproject.org/files/ENCFF714CMB/@@download/ENCFF714CMB.bam 69.8 M 0 66.6 M 0.954 SE 76 76 native 0.0 M 58.5 M 53.8 M 0.771 0.93 0.93 13.80 210 1.01 3.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/c792d5a9-6b6d-48de-a561-e1461d10d04a/@@download/cross_correlation_plot/ENCFF801UYJ-ENCFF733SUX-ENCFF738STQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB288IVO bradley-bernstein:DNA_Lib 6802 "ENCFF733SUX,ENCFF801UYJ,ENCFF738STQ" HiSeq 2500 2017-01-06T17:39:48.584304+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F192xgj0369B26QY29p8pyB0 ENCSR423UOT https://www.encodeproject.org/experiments/ENCSR423UOT "histone,histone modification,broad histone mark" H3K9me2-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF772PAF https://www.encodeproject.org/files/ENCFF772PAF/@@download/ENCFF772PAF.bam ENCFF180PYB https://www.encodeproject.org/files/ENCFF180PYB/@@download/ENCFF180PYB.bam 90.1 M 0 85.0 M 0.943 SE 76 76 native 0.0 M 73.8 M 70.6 M 0.784 0.96 0.96 25.52 210 1.01 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/37b98037-2c11-4f63-9eab-515ea2a4ab7b/@@download/cross_correlation_plot/ENCFF862YFA-ENCFF419BOI-ENCFF663CQE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB658VCI bradley-bernstein:DNA_Lib 6546 "ENCFF419BOI,ENCFF663CQE,ENCFF862YFA" "HiSeq 2000,HiSeq 2500" 2017-01-06T17:39:17.396791+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F192xx00369F00q32BFF7Gpv ENCSR657OGA https://www.encodeproject.org/experiments/ENCSR657OGA "histone,histone modification,broad histone mark" H3K9me3-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF048XXN https://www.encodeproject.org/files/ENCFF048XXN/@@download/ENCFF048XXN.bam ENCFF136ZWT https://www.encodeproject.org/files/ENCFF136ZWT/@@download/ENCFF136ZWT.bam 74.6 M 0 70.8 M 0.950 SE 76 76 native 0.0 M 59.4 M 54.8 M 0.735 0.93 0.93 14.17 205 1.01 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/10ad21db-4039-4897-b987-306f46c712aa/@@download/cross_correlation_plot/ENCFF998KHF-ENCFF564BPP-ENCFF734TVO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB385STB bradley-bernstein:DNA_Lib 6542 "ENCFF734TVO,ENCFF564BPP,ENCFF998KHF" HiSeq 2500 2017-01-05T00:23:36.872028+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1931X003699pFPY6J841Y9P ENCSR657OGA https://www.encodeproject.org/experiments/ENCSR657OGA "histone,histone modification,broad histone mark" H3K9me3-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF312DLF https://www.encodeproject.org/files/ENCFF312DLF/@@download/ENCFF312DLF.bam ENCFF530KTN https://www.encodeproject.org/files/ENCFF530KTN/@@download/ENCFF530KTN.bam 60.6 M 0 57.6 M 0.951 SE 76 76 native 0.0 M 49.1 M 33.9 M 0.559 0.70 0.69 3.05 200 1.01 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/eac4a802-35a2-43b0-945b-cedccbc16db9/@@download/cross_correlation_plot/ENCFF369UMN-ENCFF016QRX-ENCFF636RWU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB334NTR bradley-bernstein:DNA_Lib 6798 "ENCFF636RWU,ENCFF016QRX,ENCFF369UMN" HiSeq 2500 2017-01-05T00:22:15.837749+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1931gj0369JQvVQ3g0ZZP8v ENCSR878HPJ https://www.encodeproject.org/experiments/ENCSR878HPJ "histone,histone modification,broad histone mark" H4K20me1-human SK-N-SH immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF738IBQ https://www.encodeproject.org/files/ENCFF738IBQ/@@download/ENCFF738IBQ.bam ENCFF206FCW https://www.encodeproject.org/files/ENCFF206FCW/@@download/ENCFF206FCW.bam 71.4 M 0 68.6 M 0.960 SE 76 76 native 0.0 M 59.9 M 53.4 M 0.747 0.90 0.90 9.91 195 1.02 3.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/1427d47f-b716-4f2a-8b21-b4ab72408219/@@download/cross_correlation_plot/ENCFF807IIF-ENCFF551BNV-ENCFF200IJQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB546CPR bradley-bernstein:DNA_Lib 6552 "ENCFF200IJQ,ENCFF807IIF,ENCFF551BNV" HiSeq 2500 2017-01-05T00:23:50.893518+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1933bj0369J92qZ2Bf62Ff4 ENCSR878HPJ https://www.encodeproject.org/experiments/ENCSR878HPJ "histone,histone modification,broad histone mark" H4K20me1-human SK-N-SH immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF336SZY https://www.encodeproject.org/files/ENCFF336SZY/@@download/ENCFF336SZY.bam ENCFF481VAB https://www.encodeproject.org/files/ENCFF481VAB/@@download/ENCFF481VAB.bam 33.3 M 0 31.9 M 0.957 SE 76 76 native 0.0 M 27.4 M 22.6 M 0.680 0.86 0.86 7.27 210 1.03 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/79ae4026-f204-4ebc-8f6c-1444acd6652f/@@download/cross_correlation_plot/ENCFF959JYI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB391NRG bradley-bernstein:DNA_Lib 6557 ENCFF959JYI HiSeq 2000 2017-01-05T00:21:27.449008+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1933q803697QpY56J2qQ4zX ENCSR000ANN https://www.encodeproject.org/experiments/ENCSR000ANN control Control-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF298NLV https://www.encodeproject.org/files/ENCFF298NLV/@@download/ENCFF298NLV.bam ENCFF698ZZD https://www.encodeproject.org/files/ENCFF698ZZD/@@download/ENCFF698ZZD.bam 18.0 M 0 10.0 M 0.556 SE 36 36 native 0.0 M 6.5 M 4.6 M 0.253 0.72 0.74 4.04 125 1.15 6.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/52f46e13-2ebe-447a-87a3-9b871576d9a3/@@download/cross_correlation_plot/ENCFF000BKK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQV ENCFF000BKK Illumina Genome Analyzer IIx 2016-08-09T15:57:54.210352+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYFYQ0369BB4PPpG2jBgzx ENCSR000ANN https://www.encodeproject.org/experiments/ENCSR000ANN control Control-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF791XAM https://www.encodeproject.org/files/ENCFF791XAM/@@download/ENCFF791XAM.bam ENCFF009XHG https://www.encodeproject.org/files/ENCFF009XHG/@@download/ENCFF009XHG.bam 16.0 M 0 13.9 M 0.872 SE 36 36 native 0.0 M 10.1 M 10.0 M 0.625 0.99 0.99 76.08 170 1.02 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/adde8b4e-c486-4cd5-ba13-59b564bae6d9/@@download/cross_correlation_plot/ENCFF000BKI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AQW ENCFF000BKI Illumina Genome Analyzer IIx 2016-08-09T15:57:56.744295+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZYFbj03696GPBjjv2bkQfB ENCSR000ANE https://www.encodeproject.org/experiments/ENCSR000ANE "transcription factor,RNA binding protein" CTCF-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF140DYM https://www.encodeproject.org/files/ENCFF140DYM/@@download/ENCFF140DYM.bam ENCFF590TJO https://www.encodeproject.org/files/ENCFF590TJO/@@download/ENCFF590TJO.bam 22.2 M 0 10.9 M 0.490 SE 36 36 native 0.0 M 7.2 M 6.1 M 0.276 0.87 0.88 9.15 125 7.01 2.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/5171201a-9f71-46e5-aef2-0ccdfee54a85/@@download/cross_correlation_plot/ENCFF000BKP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALR ENCFF000BKP Illumina Genome Analyzer IIe 2016-12-11T04:05:14.638493+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165B580369KQ3Yk1yz1kgj1 ENCSR000ANE https://www.encodeproject.org/experiments/ENCSR000ANE "transcription factor,RNA binding protein" CTCF-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF585PNR https://www.encodeproject.org/files/ENCFF585PNR/@@download/ENCFF585PNR.bam ENCFF640ZKZ https://www.encodeproject.org/files/ENCFF640ZKZ/@@download/ENCFF640ZKZ.bam 17.8 M 0 14.4 M 0.809 SE 36 36 native 0.0 M 10.9 M 8.6 M 0.481 0.82 0.82 5.70 185 2.10 3.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd65903d-8c28-459e-bfb8-71dd3bb76847/@@download/cross_correlation_plot/ENCFF000BKS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALS ENCFF000BKS Illumina Genome Analyzer IIe 2016-12-11T04:06:15.365945+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165BB803695F8Bk64ff074z ENCSR000ARH https://www.encodeproject.org/experiments/ENCSR000ARH "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF965XCZ https://www.encodeproject.org/files/ENCFF965XCZ/@@download/ENCFF965XCZ.bam ENCFF286BLR https://www.encodeproject.org/files/ENCFF286BLR/@@download/ENCFF286BLR.bam 47.6 M 0 42.2 M 0.887 SE 36 36 native 0.0 M 32.4 M 26.2 M 0.551 0.82 0.81 5.06 195 1.02 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/43b5b44e-2a32-42a8-bda7-b73df7f62e06/@@download/cross_correlation_plot/ENCFF000BKZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ADA bradley-bernstein:DNA_Lib 103 ENCFF000BKZ Illumina Genome Analyzer 2016-12-11T04:11:02.154268+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16536Q0369GF0YB1zjPf6pf ENCSR000ARH https://www.encodeproject.org/experiments/ENCSR000ARH "transcription factor,chromatin remodeller,RNA binding protein" EZH2-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF671MAH https://www.encodeproject.org/files/ENCFF671MAH/@@download/ENCFF671MAH.bam ENCFF206RRQ https://www.encodeproject.org/files/ENCFF206RRQ/@@download/ENCFF206RRQ.bam 33.4 M 0 25.5 M 0.763 SE 36 36 native 0.0 M 19.2 M 16.7 M 0.499 0.87 0.87 7.70 180 1.03 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/412c37fc-5703-45c8-bf07-8396baf6401e/@@download/cross_correlation_plot/ENCFF000BKY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ACZ bradley-bernstein:DNA_Lib 104 ENCFF000BKY Illumina Genome Analyzer 2016-12-11T04:04:49.259605+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1653FQ0369KbxV61z4GFvXY ENCSR000APA https://www.encodeproject.org/experiments/ENCSR000APA "histone,histone modification,narrow histone mark" H2AFZ-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF306XQT https://www.encodeproject.org/files/ENCFF306XQT/@@download/ENCFF306XQT.bam ENCFF884UHF https://www.encodeproject.org/files/ENCFF884UHF/@@download/ENCFF884UHF.bam 22.1 M 0 18.7 M 0.847 SE 36 36 native 0.0 M 15.6 M 15.0 M 0.676 0.96 0.96 25.62 145 1.28 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/eff83f8a-a200-4c9e-aa6b-75f1ced2b937/@@download/cross_correlation_plot/ENCFF000BLB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOY ENCFF000BLB Illumina Genome Analyzer IIx 2016-11-07T03:18:14.045064+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJbY003695gXp561f2qYXZ ENCSR000APA https://www.encodeproject.org/experiments/ENCSR000APA "histone,histone modification,narrow histone mark" H2AFZ-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF489CMU https://www.encodeproject.org/files/ENCFF489CMU/@@download/ENCFF489CMU.bam ENCFF034PME https://www.encodeproject.org/files/ENCFF034PME/@@download/ENCFF034PME.bam 24.7 M 0 21.9 M 0.884 SE 36 36 native 0.0 M 16.9 M 16.3 M 0.657 0.97 0.97 31.01 145 1.19 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/a21aaf4b-c1c5-4ec3-9fdf-ba7bf4cdcbee/@@download/cross_correlation_plot/ENCFF000BLD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOZ ENCFF000BLD Illumina Genome Analyzer IIx 2016-11-07T03:18:07.710774+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJbg803698kJz2gxb7gp8G ENCSR000ANF https://www.encodeproject.org/experiments/ENCSR000ANF "histone,histone modification,narrow histone mark" H3K27ac-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF191YSM https://www.encodeproject.org/files/ENCFF191YSM/@@download/ENCFF191YSM.bam ENCFF749GWM https://www.encodeproject.org/files/ENCFF749GWM/@@download/ENCFF749GWM.bam 20.1 M 0 10.4 M 0.516 SE 36 36 native 0.0 M 6.8 M 6.5 M 0.321 0.96 0.96 26.42 160 1.91 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5bb6e9f-d3b4-4935-a74a-550899b00b46/@@download/cross_correlation_plot/ENCFF000BLI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ART ENCFF000BLI Illumina Genome Analyzer IIe 2016-08-09T15:58:52.475805+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY9X803696GPBjjv2bkQZp ENCSR000ANF https://www.encodeproject.org/experiments/ENCSR000ANF "histone,histone modification,narrow histone mark" H3K27ac-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF534NCP https://www.encodeproject.org/files/ENCFF534NCP/@@download/ENCFF534NCP.bam ENCFF105QVP https://www.encodeproject.org/files/ENCFF105QVP/@@download/ENCFF105QVP.bam 18.5 M 0 14.4 M 0.776 SE 36 36 native 0.0 M 10.7 M 9.6 M 0.520 0.93 0.93 13.86 200 1.57 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/643b6fb4-f3b9-4a9c-8b87-b10ee322ee95/@@download/cross_correlation_plot/ENCFF000BLJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AHG ENCFF000BLJ Illumina Genome Analyzer IIe 2016-08-09T15:58:39.450479+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZY9Zj0369BB4PPpG2jBgyy ENCSR000ANG https://www.encodeproject.org/experiments/ENCSR000ANG "histone,histone modification,broad histone mark" H3K27me3-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF232HUV https://www.encodeproject.org/files/ENCFF232HUV/@@download/ENCFF232HUV.bam ENCFF335ZRF https://www.encodeproject.org/files/ENCFF335ZRF/@@download/ENCFF335ZRF.bam 21.2 M 0 11.3 M 0.535 SE 36 36 native 0.0 M 6.9 M 6.7 M 0.317 0.97 0.97 37.72 120 1.04 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/40b3e528-5b13-42cc-a82f-a21ef2e6acb7/@@download/cross_correlation_plot/ENCFF000BLO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APU ENCFF000BLO Illumina Genome Analyzer IIe 2016-11-07T03:09:08.398456+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKGj8036963f10Qj37pkBp ENCSR000ANG https://www.encodeproject.org/experiments/ENCSR000ANG "histone,histone modification,broad histone mark" H3K27me3-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF462BRB https://www.encodeproject.org/files/ENCFF462BRB/@@download/ENCFF462BRB.bam ENCFF908QBZ https://www.encodeproject.org/files/ENCFF908QBZ/@@download/ENCFF908QBZ.bam 15.3 M 0 13.1 M 0.860 SE 36 36 native 0.0 M 9.9 M 9.0 M 0.586 0.91 0.91 11.37 160 1.05 2.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed09e7a0-614a-4811-b56b-1b80c52fcd28/@@download/cross_correlation_plot/ENCFF000BLN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AET ENCFF000BLN Illumina Genome Analyzer IIx 2016-11-07T03:09:04.883773+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKGxj03691p5Qf186B560g ENCSR000ANH https://www.encodeproject.org/experiments/ENCSR000ANH "histone,histone modification,broad histone mark" H3K36me3-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF536NDQ https://www.encodeproject.org/files/ENCFF536NDQ/@@download/ENCFF536NDQ.bam ENCFF376GWV https://www.encodeproject.org/files/ENCFF376GWV/@@download/ENCFF376GWV.bam 39.2 M 0 19.6 M 0.501 SE 36 36 native 0.0 M 12.3 M 11.9 M 0.304 0.97 0.97 37.84 120 1.05 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/314e4384-5f9a-49e7-b266-a97112f0d36f/@@download/cross_correlation_plot/ENCFF000BLZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIE ENCFF000BLZ Illumina Genome Analyzer IIe 2016-11-07T03:10:15.563044+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKG100369BJ3j0F430pZ4G ENCSR000ANH https://www.encodeproject.org/experiments/ENCSR000ANH "histone,histone modification,broad histone mark" H3K36me3-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF190SSF https://www.encodeproject.org/files/ENCFF190SSF/@@download/ENCFF190SSF.bam ENCFF983CAP https://www.encodeproject.org/files/ENCFF983CAP/@@download/ENCFF983CAP.bam 26.6 M 0 22.8 M 0.860 SE 36 36 native 0.0 M 17.5 M 16.5 M 0.621 0.95 0.95 20.47 160 1.03 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/2717abf2-0226-434b-bcb4-86ebfcf53125/@@download/cross_correlation_plot/ENCFF000BLU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AIF ENCFF000BLU Illumina Genome Analyzer IIx 2016-11-07T03:09:59.545943+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKG5Q0369KGxqqJv3G8Fzj ENCSR000ANI https://www.encodeproject.org/experiments/ENCSR000ANI "histone,histone modification,broad histone mark" H3K4me1-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF681LBD https://www.encodeproject.org/files/ENCFF681LBD/@@download/ENCFF681LBD.bam ENCFF071YDK https://www.encodeproject.org/files/ENCFF071YDK/@@download/ENCFF071YDK.bam 20.8 M 0 10.5 M 0.504 SE 36 36 native 0.0 M 6.9 M 6.8 M 0.327 0.99 0.99 68.65 130 1.18 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/c377f52c-9937-4929-b55f-a5c0d1b1f5a8/@@download/cross_correlation_plot/ENCFF000BMA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABF ENCFF000BMA Illumina Genome Analyzer IIe 2016-11-07T03:17:30.791957+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJbx803697GFbjV1b4gVfv ENCSR000ANI https://www.encodeproject.org/experiments/ENCSR000ANI "histone,histone modification,broad histone mark" H3K4me1-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF993YEM https://www.encodeproject.org/files/ENCFF993YEM/@@download/ENCFF993YEM.bam ENCFF839GEG https://www.encodeproject.org/files/ENCFF839GEG/@@download/ENCFF839GEG.bam 11.3 M 0 10.0 M 0.879 SE 36 36 native 0.0 M 7.7 M 7.4 M 0.653 0.97 0.97 29.00 175 1.10 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6f97cf2-23ab-4ab9-9dc0-eb0bf2edefbc/@@download/cross_correlation_plot/ENCFF000BLX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ABE ENCFF000BLX Illumina Genome Analyzer IIe 2016-11-07T03:17:08.463864+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJf2j0369Fq9ppXVbB9867 ENCSR000ANJ https://www.encodeproject.org/experiments/ENCSR000ANJ "histone,histone modification,narrow histone mark" H3K4me2-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF575WYE https://www.encodeproject.org/files/ENCFF575WYE/@@download/ENCFF575WYE.bam ENCFF811CYF https://www.encodeproject.org/files/ENCFF811CYF/@@download/ENCFF811CYF.bam 21.8 M 0 7.9 M 0.360 SE 36 36 native 0.0 M 5.3 M 5.2 M 0.239 0.98 0.98 57.43 135 1.45 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd02d2d7-cc13-4269-bcfc-0f4915142355/@@download/cross_correlation_plot/ENCFF000BMF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APR ENCFF000BMF Illumina Genome Analyzer IIe 2016-11-07T03:15:41.047962+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJkkQ036954FbBZ1bGf45B ENCSR000ANJ https://www.encodeproject.org/experiments/ENCSR000ANJ "histone,histone modification,narrow histone mark" H3K4me2-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF895FUE https://www.encodeproject.org/files/ENCFF895FUE/@@download/ENCFF895FUE.bam ENCFF848BUO https://www.encodeproject.org/files/ENCFF848BUO/@@download/ENCFF848BUO.bam 28.1 M 0 23.5 M 0.835 SE 36 36 native 0.0 M 18.6 M 16.9 M 0.603 0.92 0.92 12.86 180 1.20 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/244e3ed6-9633-4e45-9a01-4c71ba89d32d/@@download/cross_correlation_plot/ENCFF000BMI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695APS ENCFF000BMI Illumina Genome Analyzer IIx 2016-11-07T03:16:30.247214+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PJkz003695kGp5Vkb1Yg5F ENCSR000ANK https://www.encodeproject.org/experiments/ENCSR000ANK "histone,histone modification,narrow histone mark" H3K4me3-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF995UPF https://www.encodeproject.org/files/ENCFF995UPF/@@download/ENCFF995UPF.bam ENCFF243TLD https://www.encodeproject.org/files/ENCFF243TLD/@@download/ENCFF243TLD.bam 37.3 M 0 12.1 M 0.324 SE 36 36 native 0.0 M 8.6 M 7.6 M 0.205 0.90 0.90 10.97 165 2.97 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6f0eb59-76fb-41ac-8b2b-3c39a6287280/@@download/cross_correlation_plot/ENCFF000BMP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASV ENCFF000BMP Illumina Genome Analyzer IIe 2016-08-20T00:45:05.906939+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZQ0003693GY6YjZ976519 ENCSR000ANK https://www.encodeproject.org/experiments/ENCSR000ANK "histone,histone modification,narrow histone mark" H3K4me3-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF385LTM https://www.encodeproject.org/files/ENCFF385LTM/@@download/ENCFF385LTM.bam ENCFF313XPR https://www.encodeproject.org/files/ENCFF313XPR/@@download/ENCFF313XPR.bam 12.3 M 0 9.9 M 0.807 SE 36 36 native 0.0 M 7.2 M 6.8 M 0.554 0.96 0.96 24.96 210 1.71 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/4fd5c9ad-8721-4cf5-b803-e5c6b369a4fb/@@download/cross_correlation_plot/ENCFF000BML.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ASW ENCFF000BML Illumina Genome Analyzer IIe 2016-08-20T00:44:49.718695+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZQ2Q03696k6PjpZ95BxkV ENCSR596NOF https://www.encodeproject.org/experiments/ENCSR596NOF "histone,histone modification,narrow histone mark" H3K4me3-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF268JXD https://www.encodeproject.org/files/ENCFF268JXD/@@download/ENCFF268JXD.bam ENCFF012RYR https://www.encodeproject.org/files/ENCFF012RYR/@@download/ENCFF012RYR.bam 31.4 M 0 30.7 M 0.979 SE 36 36 36 0.0 M 24.8 M 23.5 M 0.749 0.97 0.97 36.63 215 1.21 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/90e373c2-fc55-45a7-b7d5-3e1db47ebd11/@@download/cross_correlation_plot/ENCFF243OFA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB738UWZ bradley-bernstein:DNA_Lib 4585 ENCFF243OFA HiSeq 2000 2016-08-09T16:50:16.230317+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0g1FYQ0369Bq5Vy2ZZ1bQyq ENCSR596NOF https://www.encodeproject.org/experiments/ENCSR596NOF "histone,histone modification,narrow histone mark" H3K4me3-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF574OYF https://www.encodeproject.org/files/ENCFF574OYF/@@download/ENCFF574OYF.bam ENCFF989REQ https://www.encodeproject.org/files/ENCFF989REQ/@@download/ENCFF989REQ.bam 52.1 M 0 50.7 M 0.972 SE 76 36 36 0.0 M 41.0 M 35.6 M 0.683 0.87 0.87 7.60 175 1.29 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/583f057a-2e00-4eaa-b073-9ae27840ba07/@@download/cross_correlation_plot/ENCFF794IID-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB971DWL bradley-bernstein:DNA_Lib 6094 ENCFF794IID HiSeq 2000 2016-08-09T22:41:15.282989+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0g1Fj00369FJKXX1QZJzxV2 ENCSR000ANQ https://www.encodeproject.org/experiments/ENCSR000ANQ "histone,histone modification,broad histone mark" H3K79me2-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF118ZXQ https://www.encodeproject.org/files/ENCFF118ZXQ/@@download/ENCFF118ZXQ.bam ENCFF006MEK https://www.encodeproject.org/files/ENCFF006MEK/@@download/ENCFF006MEK.bam 23.7 M 0 20.6 M 0.866 SE 36 36 native 0.0 M 15.6 M 14.0 M 0.589 0.91 0.91 11.22 125 1.13 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad254824-aef9-4247-a3ee-78d23361a076/@@download/cross_correlation_plot/ENCFF000BMR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVK ENCFF000BMR Illumina Genome Analyzer IIx 2016-11-07T03:09:20.413607+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKGJj0369B8pxyPG3K31Vv ENCSR000ANQ https://www.encodeproject.org/experiments/ENCSR000ANQ "histone,histone modification,broad histone mark" H3K79me2-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF810LOW https://www.encodeproject.org/files/ENCFF810LOW/@@download/ENCFF810LOW.bam ENCFF472PPQ https://www.encodeproject.org/files/ENCFF472PPQ/@@download/ENCFF472PPQ.bam 41.5 M 0 37.4 M 0.900 SE 36 36 native 0.0 M 29.0 M 27.3 M 0.657 0.95 0.95 19.90 125 1.09 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ee0f68e-13ff-4ce6-814a-03c66004a5cc/@@download/cross_correlation_plot/ENCFF000BMX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AVL ENCFF000BMX Illumina Genome Analyzer IIx 2016-11-07T03:10:27.905076+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKGXQ03696kxzJj982F31K ENCSR000ANL https://www.encodeproject.org/experiments/ENCSR000ANL "histone,histone modification,narrow histone mark" H3K9ac-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF341TWS https://www.encodeproject.org/files/ENCFF341TWS/@@download/ENCFF341TWS.bam ENCFF687AFX https://www.encodeproject.org/files/ENCFF687AFX/@@download/ENCFF687AFX.bam 16.4 M 0 10.0 M 0.608 SE 36 36 native 0.0 M 7.2 M 6.6 M 0.404 0.92 0.92 12.84 150 1.44 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/5cf867b7-aa60-43dd-a2a7-29b4122b9ae1/@@download/cross_correlation_plot/ENCFF000BMV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAD ENCFF000BMV Illumina Genome Analyzer IIx 2016-11-07T03:09:11.802410+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK9PQ0369B8pxyPG3K31Pv ENCSR000ANL https://www.encodeproject.org/experiments/ENCSR000ANL "histone,histone modification,narrow histone mark" H3K9ac-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF506AAD https://www.encodeproject.org/files/ENCFF506AAD/@@download/ENCFF506AAD.bam ENCFF550QZI https://www.encodeproject.org/files/ENCFF550QZI/@@download/ENCFF550QZI.bam 13.8 M 0 11.5 M 0.837 SE 36 36 native 0.0 M 8.9 M 7.2 M 0.526 0.85 0.85 6.79 165 1.33 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/e98715cd-3a99-4fe0-8070-2afefc3f36c9/@@download/cross_correlation_plot/ENCFF000BMW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AAC ENCFF000BMW Illumina Genome Analyzer IIe 2016-11-07T03:09:13.987296+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PK9Zj0369349Kqpx8PZbVQ ENCSR000ANR https://www.encodeproject.org/experiments/ENCSR000ANR "histone,histone modification,broad histone mark" H3K9me3-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF787MBP https://www.encodeproject.org/files/ENCFF787MBP/@@download/ENCFF787MBP.bam ENCFF988POC https://www.encodeproject.org/files/ENCFF988POC/@@download/ENCFF988POC.bam 21.2 M 0 18.2 M 0.861 SE 36 36 native 0.0 M 11.6 M 9.8 M 0.461 0.86 0.86 7.40 135 1.09 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/bef51c28-e4e8-4b01-b587-547033ea9b51/@@download/cross_correlation_plot/ENCFF000BNB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOC ENCFF000BNB Illumina Genome Analyzer IIx 2016-11-07T03:08:49.214218+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKJ3803696gP4JvV866Qkj ENCSR000ANR https://www.encodeproject.org/experiments/ENCSR000ANR "histone,histone modification,broad histone mark" H3K9me3-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF653OUL https://www.encodeproject.org/files/ENCFF653OUL/@@download/ENCFF653OUL.bam ENCFF498ACP https://www.encodeproject.org/files/ENCFF498ACP/@@download/ENCFF498ACP.bam 36.7 M 0 32.5 M 0.887 SE 36 36 native 0.0 M 21.4 M 20.7 M 0.564 0.97 0.97 39.76 120 1.02 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e80922e-dff6-4fe3-acf2-0186436790e5/@@download/cross_correlation_plot/ENCFF000BNG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AOB ENCFF000BNG Illumina Genome Analyzer IIx 2016-11-07T03:09:33.315382+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKJB00369B8pxyPG3K31XJ ENCSR000ANM https://www.encodeproject.org/experiments/ENCSR000ANM "histone,histone modification,broad histone mark" H4K20me1-human skeletal muscle myoblast primary cell 1 bradley-bernstein ENCODE2 GRCh38 ENCFF728RKN https://www.encodeproject.org/files/ENCFF728RKN/@@download/ENCFF728RKN.bam ENCFF814PSF https://www.encodeproject.org/files/ENCFF814PSF/@@download/ENCFF814PSF.bam 17.0 M 0 10.5 M 0.619 SE 36 36 native 0.0 M 7.2 M 6.9 M 0.406 0.96 0.96 27.02 120 1.03 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bb4f0b5-13de-4e69-a492-bb9bd8a01a9a/@@download/cross_correlation_plot/ENCFF000BNM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ALA ENCFF000BNM Illumina Genome Analyzer IIx 2016-11-07T03:08:51.740828+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKJQ00369GF5KpY436fjx1 ENCSR000ANM https://www.encodeproject.org/experiments/ENCSR000ANM "histone,histone modification,broad histone mark" H4K20me1-human skeletal muscle myoblast primary cell 2 bradley-bernstein ENCODE2 GRCh38 ENCFF156TWS https://www.encodeproject.org/files/ENCFF156TWS/@@download/ENCFF156TWS.bam ENCFF451VVZ https://www.encodeproject.org/files/ENCFF451VVZ/@@download/ENCFF451VVZ.bam 16.2 M 0 14.0 M 0.864 SE 36 36 native 0.0 M 10.4 M 9.3 M 0.572 0.91 0.91 10.80 160 1.06 2.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/87f9957d-2d8d-4114-8565-352377c2660c/@@download/cross_correlation_plot/ENCFF000BNI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695AKZ ENCFF000BNI Illumina Genome Analyzer IIx 2016-11-07T03:08:56.166305+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0PKJj003693Yx5pkGB3yJVZ ENCSR729MRJ https://www.encodeproject.org/experiments/ENCSR729MRJ control Control-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF816XYV https://www.encodeproject.org/files/ENCFF816XYV/@@download/ENCFF816XYV.bam ENCFF845VSO https://www.encodeproject.org/files/ENCFF845VSO/@@download/ENCFF845VSO.bam 91.1 M 0 88.5 M 0.971 SE 76 76 native 0.0 M 78.6 M 75.9 M 0.833 0.97 0.97 34.13 200 1.01 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd0970a5-9791-458a-8d5a-af3c78624c3e/@@download/cross_correlation_plot/ENCFF920FCI-ENCFF028KGR-ENCFF656VEQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB174DWX bradley-bernstein:DNA_Lib 7063 "ENCFF656VEQ,ENCFF920FCI,ENCFF028KGR" HiSeq 2500 2016-10-26T15:52:07.109308+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v3Fj0369J70k2QVF5F1Xx ENCSR729MRJ https://www.encodeproject.org/experiments/ENCSR729MRJ control Control-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF302IIT https://www.encodeproject.org/files/ENCFF302IIT/@@download/ENCFF302IIT.bam ENCFF519CSM https://www.encodeproject.org/files/ENCFF519CSM/@@download/ENCFF519CSM.bam 40.6 M 0 39.2 M 0.966 SE 76 76 None 0.0 M 34.9 M 33.9 M 0.834 0.97 0.97 38.69 210 1.00 0.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/112eafdf-6239-4f0a-a4be-11ac3c1992d4/@@download/cross_correlation_plot/ENCFF841FEP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB927NBD bradley-bernstein:DNA_Lib 7849 ENCFF841FEP HiSeq 2500 2016-04-23T06:20:48.330071+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqYF8036961GyjjQ2QP8jv ENCSR301VIW https://www.encodeproject.org/experiments/ENCSR301VIW "histone,histone modification,narrow histone mark" H2AFZ-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF924YVG https://www.encodeproject.org/files/ENCFF924YVG/@@download/ENCFF924YVG.bam ENCFF455MVD https://www.encodeproject.org/files/ENCFF455MVD/@@download/ENCFF455MVD.bam 96.9 M 0 93.6 M 0.966 SE 76 76 native 0.0 M 85.0 M 76.4 M 0.789 0.90 0.90 9.83 190 1.02 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ddf41f5-eb13-4231-bcca-bfa950702ef7/@@download/cross_correlation_plot/ENCFF895UUE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB690AIR bradley-bernstein:DNA_Lib 7253 ENCFF895UUE HiSeq 2500 2016-11-02T17:14:42.203481+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbjX80369KX2jPbxbQpGQX ENCSR301VIW https://www.encodeproject.org/experiments/ENCSR301VIW "histone,histone modification,narrow histone mark" H2AFZ-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF984SMT https://www.encodeproject.org/files/ENCFF984SMT/@@download/ENCFF984SMT.bam ENCFF745WKE https://www.encodeproject.org/files/ENCFF745WKE/@@download/ENCFF745WKE.bam 22.7 M 0 21.9 M 0.965 SE 76 None 0.0 M 20.0 M 19.4 M 0.856 0.97 0.97 37.18 225 1.03 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/96fbe194-83c6-4b6c-86fd-defd7f28a42c/@@download/cross_correlation_plot/ENCFF996XVT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB198GCM bradley-bernstein:DNA_Lib 7955 ENCFF996XVT HiSeq 2500 2016-06-01T18:34:52.059401+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70Fvj0369Pf540zk7xKqp0 ENCSR672HBY https://www.encodeproject.org/experiments/ENCSR672HBY "histone,histone modification,broad histone mark" H3F3A-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF398ZUD https://www.encodeproject.org/files/ENCFF398ZUD/@@download/ENCFF398ZUD.bam ENCFF924NYE https://www.encodeproject.org/files/ENCFF924NYE/@@download/ENCFF924NYE.bam 59.3 M 0 57.1 M 0.963 SE 76 76 None 0.0 M 51.3 M 46.5 M 0.785 0.91 0.91 10.74 170 1.02 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/4cbfbcce-0a7f-4d09-aeea-28b0d15a9a75/@@download/cross_correlation_plot/ENCFF229AXI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB321PVL bradley-bernstein:DNA_Lib 7256 ENCFF229AXI HiSeq 2500 2016-06-01T18:36:11.699016+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70G9803697KFfF1k89FK2G ENCSR672HBY https://www.encodeproject.org/experiments/ENCSR672HBY "histone,histone modification,broad histone mark" H3F3A-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF089LPA https://www.encodeproject.org/files/ENCFF089LPA/@@download/ENCFF089LPA.bam ENCFF255MTG https://www.encodeproject.org/files/ENCFF255MTG/@@download/ENCFF255MTG.bam 46.9 M 0 45.0 M 0.960 SE 76 76 None 0.0 M 41.1 M 39.1 M 0.835 0.95 0.95 21.90 210 1.01 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/30d906a9-d090-45b6-adc1-91b894f593d4/@@download/cross_correlation_plot/ENCFF364UMA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB457DOF bradley-bernstein:DNA_Lib 7957 ENCFF364UMA HiSeq 2500 2016-06-01T18:35:35.383421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70GFj0369Kz1qj0x8FYXx8 ENCSR210ZPC https://www.encodeproject.org/experiments/ENCSR210ZPC "histone,histone modification,narrow histone mark" H3K27ac-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF699GFE https://www.encodeproject.org/files/ENCFF699GFE/@@download/ENCFF699GFE.bam ENCFF647VTG https://www.encodeproject.org/files/ENCFF647VTG/@@download/ENCFF647VTG.bam 13.3 M 0 12.7 M 0.958 SE 76 76 native 0.0 M 11.9 M 11.7 M 0.878 0.98 0.98 50.40 205 1.31 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/a210a324-9080-4d65-8c8d-e44c1097c3b1/@@download/cross_correlation_plot/ENCFF325IYG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB060LLH bradley-bernstein:DNA_Lib 7836 ENCFF325IYG HiSeq 2500 2016-10-29T04:17:34.760128+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v3q00369J3VFb9bq4F577 ENCSR210ZPC https://www.encodeproject.org/experiments/ENCSR210ZPC "histone,histone modification,narrow histone mark" H3K27ac-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF821PAH https://www.encodeproject.org/files/ENCFF821PAH/@@download/ENCFF821PAH.bam ENCFF315GDO https://www.encodeproject.org/files/ENCFF315GDO/@@download/ENCFF315GDO.bam 66.7 M 0 65.3 M 0.979 SE "76,74" 74 native 0.0 M 61.1 M 53.3 M 0.799 0.89 0.89 9.56 235 1.14 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/4452bb62-e2a5-4745-baf1-8894eb609ed5/@@download/cross_correlation_plot/ENCFF489VEC-ENCFF586FTG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB902XMZ,ENCLB891RKX" "bradley-bernstein:DNA_Lib 7060,bradley-bernstein:DNA_Lib 7301" "ENCFF586FTG,ENCFF489VEC" HiSeq 2500 2016-10-29T04:19:22.558333+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v408036934294qbK858fP ENCSR143RMH https://www.encodeproject.org/experiments/ENCSR143RMH "histone,histone modification,broad histone mark" H3K27me3-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF327WQJ https://www.encodeproject.org/files/ENCFF327WQJ/@@download/ENCFF327WQJ.bam ENCFF805YQH https://www.encodeproject.org/files/ENCFF805YQH/@@download/ENCFF805YQH.bam 46.7 M 0 44.5 M 0.953 SE 76 None 0.0 M 40.1 M 38.5 M 0.825 0.96 0.96 25.06 185 1.01 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a392ba1-247a-4ae1-a439-fbaa1ff1f30c/@@download/cross_correlation_plot/ENCFF025USQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB523RNC bradley-bernstein:DNA_Lib 7835 ENCFF025USQ HiSeq 2500 2016-04-23T06:21:07.266135+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF5900369P59zQybP7Kqqj ENCSR143RMH https://www.encodeproject.org/experiments/ENCSR143RMH "histone,histone modification,broad histone mark" H3K27me3-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF509JMC https://www.encodeproject.org/files/ENCFF509JMC/@@download/ENCFF509JMC.bam ENCFF464GNF https://www.encodeproject.org/files/ENCFF464GNF/@@download/ENCFF464GNF.bam 68.7 M 0 67.2 M 0.977 SE "76,74" None 0.0 M 60.9 M 52.6 M 0.765 0.87 0.87 7.44 220 1.01 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/663daec7-e746-41b2-986d-533004a056cd/@@download/cross_correlation_plot/ENCFF899DVC-ENCFF553DZL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB428ZUX,ENCLB382KRQ" "bradley-bernstein:DNA_Lib 7061,bradley-bernstein:DNA_Lib 7302" "ENCFF553DZL,ENCFF899DVC" HiSeq 2500 2016-06-01T18:38:02.742818+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx707zQ036953VPvyQGg7v4z ENCSR651JDA https://www.encodeproject.org/experiments/ENCSR651JDA "histone,histone modification,broad histone mark" H3K36me3-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF343TOI https://www.encodeproject.org/files/ENCFF343TOI/@@download/ENCFF343TOI.bam ENCFF503DIZ https://www.encodeproject.org/files/ENCFF503DIZ/@@download/ENCFF503DIZ.bam 48.6 M 0 46.5 M 0.957 SE 76 None 0.0 M 41.0 M 39.7 M 0.818 0.97 0.97 36.11 110 1.00 0.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/4826e011-db3f-4787-a93a-13e80968e2b0/@@download/cross_correlation_plot/ENCFF377EMO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB140OFC bradley-bernstein:DNA_Lib 7837 ENCFF377EMO HiSeq 2500 2016-04-23T06:15:34.166299+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF7B80369Jy28Xy197y388 ENCSR651JDA https://www.encodeproject.org/experiments/ENCSR651JDA "histone,histone modification,broad histone mark" H3K36me3-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF935GKP https://www.encodeproject.org/files/ENCFF935GKP/@@download/ENCFF935GKP.bam ENCFF081SJG https://www.encodeproject.org/files/ENCFF081SJG/@@download/ENCFF081SJG.bam 86.4 M 0 83.4 M 0.966 SE 76 76 native 0.0 M 72.3 M 66.5 M 0.770 0.92 0.92 12.50 195 1.01 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/74e3c56e-d9e4-4924-ad34-2f4a130d5a54/@@download/cross_correlation_plot/ENCFF414LVQ-ENCFF931NYF-ENCFF478HDK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB046MKU bradley-bernstein:DNA_Lib 7057 "ENCFF414LVQ,ENCFF931NYF,ENCFF478HDK" HiSeq 2500 2016-10-29T04:21:18.085705+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v52Q0369Bj2bF0JP9K20q ENCSR130IMV https://www.encodeproject.org/experiments/ENCSR130IMV "histone,histone modification,broad histone mark" H3K4me1-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF647VCI https://www.encodeproject.org/files/ENCFF647VCI/@@download/ENCFF647VCI.bam ENCFF839FIM https://www.encodeproject.org/files/ENCFF839FIM/@@download/ENCFF839FIM.bam 51.5 M 0 49.8 M 0.965 SE 76 76 native 0.0 M 45.7 M 41.6 M 0.806 0.91 0.91 11.14 185 1.03 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/cedf44c0-d87a-450f-8477-ae17edf329d9/@@download/cross_correlation_plot/ENCFF168IPG-ENCFF141UQL-ENCFF536PAG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB440JXQ,ENCLB275RJO" "bradley-bernstein:DNA_Lib 8039,bradley-bernstein:DNA_Lib 7248" "ENCFF141UQL,ENCFF536PAG,ENCFF168IPG" HiSeq 2500 2016-10-29T04:20:32.473124+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v66j0369BgF5f15PFG16b ENCSR130IMV https://www.encodeproject.org/experiments/ENCSR130IMV "histone,histone modification,broad histone mark" H3K4me1-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF056FTV https://www.encodeproject.org/files/ENCFF056FTV/@@download/ENCFF056FTV.bam ENCFF914EFU https://www.encodeproject.org/files/ENCFF914EFU/@@download/ENCFF914EFU.bam 62.4 M 0 59.0 M 0.945 SE 76 None 0.0 M 53.7 M 51.5 M 0.826 0.96 0.96 26.94 195 1.02 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca6ae9a3-0997-4be2-b166-143b097bc7d6/@@download/cross_correlation_plot/ENCFF314TXC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB201ZGA bradley-bernstein:DNA_Lib 7832 ENCFF314TXC HiSeq 2500 2016-04-23T06:21:09.016747+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF5yj03697k1Gq6Q69QYK4 ENCSR783AXV https://www.encodeproject.org/experiments/ENCSR783AXV "histone,histone modification,narrow histone mark" H3K4me2-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF446SEK https://www.encodeproject.org/files/ENCFF446SEK/@@download/ENCFF446SEK.bam ENCFF988EOW https://www.encodeproject.org/files/ENCFF988EOW/@@download/ENCFF988EOW.bam 56.4 M 0 53.0 M 0.940 SE 76 None 0.0 M 49.0 M 46.2 M 0.821 0.94 0.95 19.26 195 1.18 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6b34c0e-2ade-4f31-880b-043949a0a744/@@download/cross_correlation_plot/ENCFF235KGI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB160PJU bradley-bernstein:DNA_Lib 7833 ENCFF235KGI HiSeq 2500 2016-04-23T06:21:27.800373+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF5G803695GjzbkbPGV3FJ ENCSR783AXV https://www.encodeproject.org/experiments/ENCSR783AXV "histone,histone modification,narrow histone mark" H3K4me2-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF553PRV https://www.encodeproject.org/files/ENCFF553PRV/@@download/ENCFF553PRV.bam ENCFF590KCB https://www.encodeproject.org/files/ENCFF590KCB/@@download/ENCFF590KCB.bam 56.4 M 0 54.6 M 0.969 SE 76 None 0.0 M 50.3 M 45.0 M 0.798 0.89 0.89 9.38 190 1.06 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/4532e90b-3fbd-4fcc-b416-7655b59872f4/@@download/cross_correlation_plot/ENCFF850RNS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119OKC bradley-bernstein:DNA_Lib 7249 ENCFF850RNS HiSeq 2500 2016-04-23T06:21:20.779967+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF5Jj03695GjzbkbPGV3Fb ENCSR515PKY https://www.encodeproject.org/experiments/ENCSR515PKY "histone,histone modification,narrow histone mark" H3K4me3-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF494PIW https://www.encodeproject.org/files/ENCFF494PIW/@@download/ENCFF494PIW.bam ENCFF990SNA https://www.encodeproject.org/files/ENCFF990SNA/@@download/ENCFF990SNA.bam 48.0 M 0 46.4 M 0.968 SE 76 76 native 0.0 M 41.3 M 34.7 M 0.724 0.84 0.84 6.44 205 1.22 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/e19d1aa2-4204-4012-a315-f58dd938f2a2/@@download/cross_correlation_plot/ENCFF939KKS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB220GCN bradley-bernstein:DNA_Lib 7059 ENCFF939KKS HiSeq 2500 2016-10-29T04:18:43.359714+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v4K80369Bj2bF0JP9K20F ENCSR515PKY https://www.encodeproject.org/experiments/ENCSR515PKY "histone,histone modification,narrow histone mark" H3K4me3-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF421HYU https://www.encodeproject.org/files/ENCFF421HYU/@@download/ENCFF421HYU.bam ENCFF244PXE https://www.encodeproject.org/files/ENCFF244PXE/@@download/ENCFF244PXE.bam 30.4 M 0 29.0 M 0.955 SE 76 76 native 0.0 M 26.1 M 25.0 M 0.822 0.96 0.96 27.58 210 1.33 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/8fd9b181-b5eb-4c76-a8fd-400bb193de7c/@@download/cross_correlation_plot/ENCFF608BBK-ENCFF779TJD-ENCFF648HCX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB169JVM bradley-bernstein:DNA_Lib 7891 "ENCFF648HCX,ENCFF779TJD,ENCFF608BBK" HiSeq 2500 2016-10-29T04:18:40.142698+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F09v4b80369P876f29P7QJQv ENCSR493FIV https://www.encodeproject.org/experiments/ENCSR493FIV "histone,histone modification,broad histone mark" H3K79me2-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF033JLQ https://www.encodeproject.org/files/ENCFF033JLQ/@@download/ENCFF033JLQ.bam ENCFF067DQR https://www.encodeproject.org/files/ENCFF067DQR/@@download/ENCFF067DQR.bam 54.8 M 0 53.1 M 0.968 SE 76 None 0.0 M 48.0 M 41.4 M 0.754 0.86 0.86 7.01 185 1.02 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e566a46-0d2f-4968-8c2b-5109413db86a/@@download/cross_correlation_plot/ENCFF647CJF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB637MQA bradley-bernstein:DNA_Lib 7254 ENCFF647CJF HiSeq 2500 2016-06-01T18:36:35.889693+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70Fz80369GG5Bkyx7vJ8v5 ENCSR493FIV https://www.encodeproject.org/experiments/ENCSR493FIV "histone,histone modification,broad histone mark" H3K79me2-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF518AQW https://www.encodeproject.org/files/ENCFF518AQW/@@download/ENCFF518AQW.bam ENCFF464VWJ https://www.encodeproject.org/files/ENCFF464VWJ/@@download/ENCFF464VWJ.bam 42.8 M 0 41.0 M 0.958 SE 76 None 0.0 M 37.5 M 35.9 M 0.840 0.96 0.96 25.41 90 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/bfd760a1-3f4f-41fd-a2a0-6b311bf24ae8/@@download/cross_correlation_plot/ENCFF142HNK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB367GKS bradley-bernstein:DNA_Lib 7956 ENCFF142HNK HiSeq 2500 2016-06-01T18:35:39.975381+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70G1Q03697KFfF1k89FK22 ENCSR540UZV https://www.encodeproject.org/experiments/ENCSR540UZV "histone,histone modification,narrow histone mark" H3K9ac-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF496OKE https://www.encodeproject.org/files/ENCFF496OKE/@@download/ENCFF496OKE.bam ENCFF116EVP https://www.encodeproject.org/files/ENCFF116EVP/@@download/ENCFF116EVP.bam 18.7 M 0 18.0 M 0.964 SE 76 76 native 0.0 M 16.6 M 16.0 M 0.854 0.96 0.96 28.31 225 1.11 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/c628249c-d803-4507-bc79-5ee0127d83e5/@@download/cross_correlation_plot/ENCFF300KVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB318QBD bradley-bernstein:DNA_Lib 7954 ENCFF300KVN HiSeq 2500 2016-08-09T16:50:40.571642+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7zj03692zxj1pQ2ky7bb ENCSR540UZV https://www.encodeproject.org/experiments/ENCSR540UZV "histone,histone modification,narrow histone mark" H3K9ac-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF941RPK https://www.encodeproject.org/files/ENCFF941RPK/@@download/ENCFF941RPK.bam ENCFF925OKA https://www.encodeproject.org/files/ENCFF925OKA/@@download/ENCFF925OKA.bam 39.1 M 0 37.6 M 0.963 SE 76 76 native 0.0 M 34.4 M 33.0 M 0.844 0.96 0.96 25.18 190 1.07 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/db1a4097-24cd-4eaf-883d-eb75d091a8ee/@@download/cross_correlation_plot/ENCFF944GYJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB762VOZ bradley-bernstein:DNA_Lib 7252 ENCFF944GYJ HiSeq 2500 2016-08-09T16:52:13.441465+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV81Q03692zxj1pQ2ky7by ENCSR090QTV https://www.encodeproject.org/experiments/ENCSR090QTV "histone,histone modification,broad histone mark" H3K9me3-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF867LMQ https://www.encodeproject.org/files/ENCFF867LMQ/@@download/ENCFF867LMQ.bam ENCFF343LOC https://www.encodeproject.org/files/ENCFF343LOC/@@download/ENCFF343LOC.bam 45.0 M 0 42.5 M 0.943 SE 76 None 0.0 M 35.2 M 34.1 M 0.758 0.97 0.97 39.85 170 1.01 0.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2372da6-cd48-4fdd-bac1-a0b8d0a22c7b/@@download/cross_correlation_plot/ENCFF195VIE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB443HPI bradley-bernstein:DNA_Lib 7839 ENCFF195VIE HiSeq 2500 2016-04-23T06:20:29.592687+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF64Q036925PXQx199gQ9g ENCSR090QTV https://www.encodeproject.org/experiments/ENCSR090QTV "histone,histone modification,broad histone mark" H3K9me3-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF591SRP https://www.encodeproject.org/files/ENCFF591SRP/@@download/ENCFF591SRP.bam ENCFF363YSF https://www.encodeproject.org/files/ENCFF363YSF/@@download/ENCFF363YSF.bam 43.8 M 0 42.0 M 0.959 SE 76 None 0.0 M 34.4 M 33.4 M 0.763 0.97 0.97 37.85 190 1.01 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7c8e32f-4c5e-4275-adce-06240fa195e4/@@download/cross_correlation_plot/ENCFF550SQB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB938CUO bradley-bernstein:DNA_Lib 7058 ENCFF550SQB HiSeq 2500 2016-04-23T06:20:23.364397+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF660036911XBkv59P7489 ENCSR189XIE https://www.encodeproject.org/experiments/ENCSR189XIE "histone,histone modification,broad histone mark" H4K20me1-human smooth muscle cell in vitro differentiated cells 1 bradley-bernstein ENCODE3 GRCh38 ENCFF324RRG https://www.encodeproject.org/files/ENCFF324RRG/@@download/ENCFF324RRG.bam ENCFF345MLN https://www.encodeproject.org/files/ENCFF345MLN/@@download/ENCFF345MLN.bam 60.7 M 0 58.6 M 0.965 SE 76 None 0.0 M 53.4 M 49.8 M 0.820 0.93 0.93 15.15 200 1.02 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/295597dd-8f89-4103-8095-5e0ed65b75d0/@@download/cross_correlation_plot/ENCFF952BVI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB938LRC bradley-bernstein:DNA_Lib 7251 ENCFF952BVI HiSeq 2500 2016-06-01T18:36:13.289151+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70G480369Kz1qj0x8FYXvz ENCSR189XIE https://www.encodeproject.org/experiments/ENCSR189XIE "histone,histone modification,broad histone mark" H4K20me1-human smooth muscle cell in vitro differentiated cells 2 bradley-bernstein ENCODE3 GRCh38 ENCFF867OLO https://www.encodeproject.org/files/ENCFF867OLO/@@download/ENCFF867OLO.bam ENCFF650RZN https://www.encodeproject.org/files/ENCFF650RZN/@@download/ENCFF650RZN.bam 41.7 M 0 40.1 M 0.962 SE 76 None 0.0 M 36.3 M 35.1 M 0.841 0.97 0.97 30.79 170 1.01 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7c6523b-cd12-42c9-a2f0-fdbe9837566c/@@download/cross_correlation_plot/ENCFF673SBP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB837WBU bradley-bernstein:DNA_Lib 7973 ENCFF673SBP HiSeq 2500 2016-06-01T18:35:31.451278+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx70G6Q03694vggpq17XJf5q ENCSR189UPU https://www.encodeproject.org/experiments/ENCSR189UPU control Control-human spleen tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF608SQR https://www.encodeproject.org/files/ENCFF608SQR/@@download/ENCFF608SQR.bam ENCFF881SIL https://www.encodeproject.org/files/ENCFF881SIL/@@download/ENCFF881SIL.bam 56.2 M 0 54.6 M 0.971 SE 76 76 native 0.0 M 48.3 M 47.4 M 0.843 0.98 0.98 59.52 110 1.00 0.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/709fcad5-2fbd-4ef2-9a5b-98f615d8c1b8/@@download/cross_correlation_plot/ENCFF935YMD-ENCFF131OEZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB930ADO bradley-bernstein:DNA_Lib 8238 "ENCFF131OEZ,ENCFF935YMD" HiSeq 2500 2016-10-27T22:00:21.104602+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Xj80369FvKVQXxFJjzG6 ENCSR726HTS https://www.encodeproject.org/experiments/ENCSR726HTS "histone,histone modification,narrow histone mark" H3K27ac-human spleen tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF289QOL https://www.encodeproject.org/files/ENCFF289QOL/@@download/ENCFF289QOL.bam ENCFF625ZFT https://www.encodeproject.org/files/ENCFF625ZFT/@@download/ENCFF625ZFT.bam 52.0 M 0 49.0 M 0.944 SE 76 76 native 0.0 M 46.0 M 39.1 M 0.753 0.85 0.87 9.11 190 1.58 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/2785e597-fd43-4a94-b50d-a183cebb29b9/@@download/cross_correlation_plot/ENCFF234GKO-ENCFF451NBT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB603CIJ bradley-bernstein:DNA_Lib 8162 "ENCFF234GKO,ENCFF451NBT" HiSeq 2500 2016-10-31T13:21:21.096263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8pf003698B80B4kPK27PJ ENCSR161FEJ https://www.encodeproject.org/experiments/ENCSR161FEJ "histone,histone modification,broad histone mark" H3K27me3-human spleen tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF202EUA https://www.encodeproject.org/files/ENCFF202EUA/@@download/ENCFF202EUA.bam ENCFF029XMF https://www.encodeproject.org/files/ENCFF029XMF/@@download/ENCFF029XMF.bam 52.2 M 0 50.8 M 0.974 SE 76 76 native 0.0 M 45.3 M 41.4 M 0.793 0.92 0.92 11.68 215 1.01 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d40cbd9-2289-4e1a-87e4-b96e609a068f/@@download/cross_correlation_plot/ENCFF614UNC-ENCFF281HIS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB055OMO bradley-bernstein:DNA_Lib 8182 "ENCFF281HIS,ENCFF614UNC" HiSeq 2500 2016-10-31T13:21:10.328168+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8p7Q0369P876f29P7Qb1B ENCSR589TCU https://www.encodeproject.org/experiments/ENCSR589TCU "histone,histone modification,broad histone mark" H3K36me3-human spleen tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF441WJF https://www.encodeproject.org/files/ENCFF441WJF/@@download/ENCFF441WJF.bam ENCFF722VTQ https://www.encodeproject.org/files/ENCFF722VTQ/@@download/ENCFF722VTQ.bam 63.4 M 0 56.9 M 0.897 SE 76 76 native 0.0 M 50.5 M 46.5 M 0.734 0.92 0.92 12.70 265 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/0351a032-16ea-4ff9-916e-eeb355c0b0a5/@@download/cross_correlation_plot/ENCFF924XII-ENCFF367XWW-ENCFF935HOQ-ENCFF035TWK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB582YII bradley-bernstein:DNA_Lib 8189 "ENCFF935HOQ,ENCFF924XII,ENCFF367XWW,ENCFF035TWK" HiSeq 2500 2017-01-26T20:55:41.963466+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24k7V803693Jf2v97QJ7gg4 ENCSR659RJP https://www.encodeproject.org/experiments/ENCSR659RJP "histone,histone modification,broad histone mark" H3K4me1-human spleen tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF229KGO https://www.encodeproject.org/files/ENCFF229KGO/@@download/ENCFF229KGO.bam ENCFF047BYH https://www.encodeproject.org/files/ENCFF047BYH/@@download/ENCFF047BYH.bam 61.5 M 0 59.6 M 0.969 SE 76 76 native 0.0 M 52.8 M 46.0 M 0.748 0.87 0.87 7.51 205 1.01 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2f9aed0-16fa-475c-833a-86f8c960f6fa/@@download/cross_correlation_plot/ENCFF684TPG-ENCFF354IUU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB747JAN bradley-bernstein:DNA_Lib 8178 "ENCFF684TPG,ENCFF354IUU" HiSeq 2500 2016-10-31T13:21:41.658723+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8ppj0369JYX7855VG0Z4X ENCSR197QDK https://www.encodeproject.org/experiments/ENCSR197QDK "histone,histone modification,narrow histone mark" H3K4me3-human spleen tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF813EVB https://www.encodeproject.org/files/ENCFF813EVB/@@download/ENCFF813EVB.bam ENCFF941NIX https://www.encodeproject.org/files/ENCFF941NIX/@@download/ENCFF941NIX.bam 118.8 M 0 108.0 M 0.909 SE 76 76 native 0.0 M 99.2 M 58.6 M 0.494 0.59 0.67 3.98 210 1.83 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/939f80ce-7ed9-403f-a66f-c4dfcead253b/@@download/cross_correlation_plot/ENCFF333RSU-ENCFF686AJL-ENCFF026MFR-ENCFF761RNN-ENCFF156PMC-ENCFF473FYQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB613QLF bradley-bernstein:DNA_Lib 8161 "ENCFF473FYQ,ENCFF026MFR,ENCFF761RNN,ENCFF333RSU,ENCFF686AJL,ENCFF156PMC" HiSeq 2500 2016-10-31T13:23:34.979039+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8pV80369BgF5f15PFG8Yv ENCSR105URN https://www.encodeproject.org/experiments/ENCSR105URN "histone,histone modification,broad histone mark" H3K9me3-human spleen tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF634ZFT https://www.encodeproject.org/files/ENCFF634ZFT/@@download/ENCFF634ZFT.bam ENCFF424XXA https://www.encodeproject.org/files/ENCFF424XXA/@@download/ENCFF424XXA.bam 65.5 M 0 61.2 M 0.934 SE 76 76 native 0.0 M 46.2 M 43.4 M 0.662 0.94 0.95 19.04 220 1.02 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/864c5bee-7e95-4ad2-9e0d-0eff60550c6b/@@download/cross_correlation_plot/ENCFF044RKK-ENCFF247WRE-ENCFF931VOQ-ENCFF226KAM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB251HSM bradley-bernstein:DNA_Lib 8185 "ENCFF226KAM,ENCFF247WRE,ENCFF931VOQ,ENCFF044RKK" HiSeq 2500 2016-10-31T13:22:43.280016+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8pGQ036960kqK0JVbgbq4 ENCSR539HNK https://www.encodeproject.org/experiments/ENCSR539HNK control Control-human stomach tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF419ELL https://www.encodeproject.org/files/ENCFF419ELL/@@download/ENCFF419ELL.bam ENCFF161TIO https://www.encodeproject.org/files/ENCFF161TIO/@@download/ENCFF161TIO.bam 82.8 M 0 80.0 M 0.967 SE 76 76 native 0.0 M 70.9 M 69.2 M 0.836 0.98 0.98 50.13 110 1.00 0.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/81fbe455-1aef-43e3-8e4a-3805e7affa2e/@@download/cross_correlation_plot/ENCFF436CCE-ENCFF332CUC-ENCFF818YLR-ENCFF360ZXY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB649IYW,ENCLB026KQN" "bradley-bernstein:DNA_Lib 8229,bradley-bernstein:DNA_Lib 7978" "ENCFF332CUC,ENCFF818YLR,ENCFF360ZXY,ENCFF436CCE" HiSeq 2500 2016-10-27T22:04:38.221160+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091Qx00369PK6yVbxF5B9Fp ENCSR133NBJ https://www.encodeproject.org/experiments/ENCSR133NBJ "histone,histone modification,narrow histone mark" H3K27ac-human stomach tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF913JKY https://www.encodeproject.org/files/ENCFF913JKY/@@download/ENCFF913JKY.bam ENCFF717YPT https://www.encodeproject.org/files/ENCFF717YPT/@@download/ENCFF717YPT.bam 31.3 M 0 30.1 M 0.963 SE 76 76 native 0.0 M 28.3 M 26.8 M 0.858 0.95 0.95 21.77 255 1.28 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2e17dd8-e933-4ca8-baca-8a6b980688b9/@@download/cross_correlation_plot/ENCFF964NOS-ENCFF628GCG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB704GCC bradley-bernstein:DNA_Lib 8068 "ENCFF964NOS,ENCFF628GCG" HiSeq 2500 2016-10-31T13:25:12.478864+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8Z3Q0369668063VP6bvPZ ENCSR357ROS https://www.encodeproject.org/experiments/ENCSR357ROS "histone,histone modification,broad histone mark" H3K27me3-human stomach tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF189FFP https://www.encodeproject.org/files/ENCFF189FFP/@@download/ENCFF189FFP.bam ENCFF768RKD https://www.encodeproject.org/files/ENCFF768RKD/@@download/ENCFF768RKD.bam 59.9 M 0 58.5 M 0.977 SE 76 76 native 0.0 M 52.0 M 49.8 M 0.831 0.96 0.96 23.85 290 1.01 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/db9f1184-bc52-4db3-b0e0-ab0f92ba944f/@@download/cross_correlation_plot/ENCFF258NZF-ENCFF854WWM-ENCFF233VYG-ENCFF275FTE-ENCFF127WEL-ENCFF297CEL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB244ZME bradley-bernstein:DNA_Lib 8243 "ENCFF258NZF,ENCFF233VYG,ENCFF854WWM,ENCFF127WEL,ENCFF297CEL,ENCFF275FTE" HiSeq 2500 2016-11-04T04:56:53.516972+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Jpj68036987J34F4Qzj85y ENCSR166CNR https://www.encodeproject.org/experiments/ENCSR166CNR "histone,histone modification,broad histone mark" H3K36me3-human stomach tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF352KEE https://www.encodeproject.org/files/ENCFF352KEE/@@download/ENCFF352KEE.bam ENCFF844YFQ https://www.encodeproject.org/files/ENCFF844YFQ/@@download/ENCFF844YFQ.bam 69.6 M 0 66.7 M 0.958 SE 76 76 native 0.0 M 60.2 M 57.7 M 0.829 0.96 0.96 24.92 300 1.02 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/17c36e75-d788-48b0-8a60-077707a359c7/@@download/cross_correlation_plot/ENCFF433CTC-ENCFF872MED-ENCFF058KWR-ENCFF113JDT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB742OEJ bradley-bernstein:DNA_Lib 8080 "ENCFF872MED,ENCFF058KWR,ENCFF113JDT,ENCFF433CTC" HiSeq 2500 2016-10-31T13:27:28.400666+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8Z8Q0369Bj2bF0JP9K9j6 ENCSR903QBX https://www.encodeproject.org/experiments/ENCSR903QBX "histone,histone modification,broad histone mark" H3K4me1-human stomach tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF787PAF https://www.encodeproject.org/files/ENCFF787PAF/@@download/ENCFF787PAF.bam ENCFF649GAN https://www.encodeproject.org/files/ENCFF649GAN/@@download/ENCFF649GAN.bam 59.6 M 0 58.0 M 0.975 SE 76 76 native 0.0 M 52.6 M 49.3 M 0.827 0.94 0.94 15.83 225 1.01 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/efcfe083-2614-4294-bba5-41e929e95f73/@@download/cross_correlation_plot/ENCFF540OQG-ENCFF681NWK-ENCFF148DTG-ENCFF721ABO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB809SOQ bradley-bernstein:DNA_Lib 8244 "ENCFF681NWK,ENCFF721ABO,ENCFF148DTG,ENCFF540OQG" HiSeq 2500 2017-01-26T20:58:11.318411+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24k2k803690f3z88kY3gy58 ENCSR489ZLL https://www.encodeproject.org/experiments/ENCSR489ZLL "histone,histone modification,narrow histone mark" H3K4me3-human stomach tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF080YIC https://www.encodeproject.org/files/ENCFF080YIC/@@download/ENCFF080YIC.bam ENCFF085JFA https://www.encodeproject.org/files/ENCFF085JFA/@@download/ENCFF085JFA.bam 27.0 M 0 26.4 M 0.978 SE 76 76 native 0.0 M 24.3 M 22.5 M 0.831 0.92 0.93 15.08 275 1.69 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9447c6c-3b4d-45c7-9400-23406f9e1efe/@@download/cross_correlation_plot/ENCFF033EFF-ENCFF697DBC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB841YRS bradley-bernstein:DNA_Lib 8242 "ENCFF033EFF,ENCFF697DBC" HiSeq 2500 2016-10-31T13:24:38.267236+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8Zb00369668063VP6bvPz ENCSR546HZF https://www.encodeproject.org/experiments/ENCSR546HZF "histone,histone modification,broad histone mark" H3K9me3-human stomach tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF872RJD https://www.encodeproject.org/files/ENCFF872RJD/@@download/ENCFF872RJD.bam ENCFF934FFV https://www.encodeproject.org/files/ENCFF934FFV/@@download/ENCFF934FFV.bam 77.6 M 0 73.2 M 0.943 SE 76 76 native 0.0 M 56.0 M 52.6 M 0.678 0.94 0.95 18.73 255 1.01 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/4dfaf353-f3e7-4561-ab6e-3998e53273b8/@@download/cross_correlation_plot/ENCFF957RVD-ENCFF985ZLE-ENCFF594DTQ-ENCFF922SIA-ENCFF836ESO-ENCFF054ZLW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB155PYL bradley-bernstein:DNA_Lib 8241 "ENCFF957RVD,ENCFF922SIA,ENCFF985ZLE,ENCFF836ESO,ENCFF054ZLW,ENCFF594DTQ" HiSeq 2500 2017-01-26T20:56:39.806002+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24k5g80369JKqxP2Z95qYVx ENCSR179YLS https://www.encodeproject.org/experiments/ENCSR179YLS control Control-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF676EKJ https://www.encodeproject.org/files/ENCFF676EKJ/@@download/ENCFF676EKJ.bam ENCFF119DFE https://www.encodeproject.org/files/ENCFF119DFE/@@download/ENCFF119DFE.bam 88.7 M 0 86.2 M 0.972 SE "76,36" 36 36 0.0 M 65.2 M 60.9 M 0.686 0.94 0.94 15.76 210 1.01 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/40eb5c27-1b24-4fba-af8b-577096b8aacb/@@download/cross_correlation_plot/ENCFF244WIG-ENCFF651VMP-ENCFF002AVH_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB189TIB bradley-bernstein:DNA_Lib 3038 "ENCFF244WIG,ENCFF002AVH,ENCFF651VMP" "HiSeq 2000,HiSeq 2500" 2016-10-26T23:01:20.763290+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082YvQ0369JgG4ppJK6p730 ENCSR179YLS https://www.encodeproject.org/experiments/ENCSR179YLS control Control-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF506DRY https://www.encodeproject.org/files/ENCFF506DRY/@@download/ENCFF506DRY.bam ENCFF610ZOD https://www.encodeproject.org/files/ENCFF610ZOD/@@download/ENCFF610ZOD.bam 55.0 M 0 53.2 M 0.968 SE "76,37,36" 36 36 0.0 M 39.9 M 38.9 M 0.707 0.98 0.98 42.49 235 1.01 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/df7e7958-31a1-413b-9f9e-1bf1d81af823/@@download/cross_correlation_plot/ENCFF982FDH-ENCFF355DMM-ENCFF812ISD-ENCFF935ETD_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB944MPB bradley-bernstein:DNA_Lib 4463 "ENCFF355DMM,ENCFF935ETD,ENCFF982FDH,ENCFF812ISD" HiSeq 2500 2016-10-26T22:59:12.162970+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Z380369JKJFVg9KK38pQ ENCSR869HJR https://www.encodeproject.org/experiments/ENCSR869HJR "histone,histone modification,narrow histone mark" H2AFZ-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF617ZMI https://www.encodeproject.org/files/ENCFF617ZMI/@@download/ENCFF617ZMI.bam ENCFF364YCZ https://www.encodeproject.org/files/ENCFF364YCZ/@@download/ENCFF364YCZ.bam 34.8 M 0 30.9 M 0.889 SE 36 36 36 0.0 M 24.0 M 12.4 M 0.355 0.54 0.53 2.12 215 1.10 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecb2adb1-8b1e-49b4-b4c3-503d72540ce8/@@download/cross_correlation_plot/ENCFF002AXH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB652XPH bradley-bernstein:DNA_Lib 3208 ENCFF002AXH HiSeq 2000 2016-10-26T22:52:25.435432+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Zv80369JgG4ppJK6p73B ENCSR869HJR https://www.encodeproject.org/experiments/ENCSR869HJR "histone,histone modification,narrow histone mark" H2AFZ-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF470USI https://www.encodeproject.org/files/ENCFF470USI/@@download/ENCFF470USI.bam ENCFF586IEJ https://www.encodeproject.org/files/ENCFF586IEJ/@@download/ENCFF586IEJ.bam 52.5 M 0 50.5 M 0.961 SE "76,37" 36 36 0.0 M 38.6 M 36.2 M 0.690 0.94 0.94 16.19 225 1.03 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6734e1b-fbb4-46ac-a934-6b7a917c7c5d/@@download/cross_correlation_plot/ENCFF551OAX-ENCFF252ZHI-ENCFF002BBB_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB842WJP bradley-bernstein:DNA_Lib 4459 "ENCFF002BBB,ENCFF551OAX,ENCFF252ZHI" HiSeq 2500 2016-10-26T22:52:30.391261+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082b0j0369JgG4ppJK6p73X ENCSR771QCM https://www.encodeproject.org/experiments/ENCSR771QCM "histone,histone modification,broad histone mark" H3F3A-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF033JLT https://www.encodeproject.org/files/ENCFF033JLT/@@download/ENCFF033JLT.bam ENCFF584NNN https://www.encodeproject.org/files/ENCFF584NNN/@@download/ENCFF584NNN.bam 36.0 M 0 35.1 M 0.975 SE 76 36 36 0.0 M 26.9 M 23.6 M 0.654 0.88 0.87 7.79 180 1.02 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/76c67495-15cf-47bc-b436-ff612c65a236/@@download/cross_correlation_plot/ENCFF231XQF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB223QLS bradley-bernstein:DNA_Lib 6948 ENCFF231XQF HiSeq 2500 2017-03-23T23:32:17.589450+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3B412j0369PV79xF7VV0580 ENCSR771QCM https://www.encodeproject.org/experiments/ENCSR771QCM "histone,histone modification,broad histone mark" H3F3A-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF559HLS https://www.encodeproject.org/files/ENCFF559HLS/@@download/ENCFF559HLS.bam ENCFF632LIX https://www.encodeproject.org/files/ENCFF632LIX/@@download/ENCFF632LIX.bam 30.2 M 0 29.6 M 0.979 SE 76 36 36 0.0 M 23.0 M 20.7 M 0.687 0.90 0.90 10.19 200 1.03 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ffb0cd5-c4cf-45de-97ac-363fefeef58e/@@download/cross_correlation_plot/ENCFF521IES-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB882ZXV bradley-bernstein:DNA_Lib 6532 ENCFF521IES HiSeq 2500 2017-03-23T23:31:08.068778+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3B419003698ZPVK3Gg1kyvG ENCSR307DQT https://www.encodeproject.org/experiments/ENCSR307DQT "histone,histone modification,narrow histone mark" H3K27ac-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF730NKH https://www.encodeproject.org/files/ENCFF730NKH/@@download/ENCFF730NKH.bam ENCFF285SNU https://www.encodeproject.org/files/ENCFF285SNU/@@download/ENCFF285SNU.bam 54.3 M 0 52.3 M 0.964 SE "76,37" 36 36 0.0 M 42.2 M 32.8 M 0.605 0.78 0.81 5.83 205 1.25 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2a2eca8-cd6d-4dd2-80f4-cb20e0247d67/@@download/cross_correlation_plot/ENCFF631IKT-ENCFF575WVR-ENCFF002AYA_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB983FOR bradley-bernstein:DNA_Lib 4845 "ENCFF002AYA,ENCFF575WVR,ENCFF631IKT" HiSeq 2500 2016-10-26T22:50:22.800081+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082g20036923pJJqk9xzZ2x ENCSR307DQT https://www.encodeproject.org/experiments/ENCSR307DQT "histone,histone modification,narrow histone mark" H3K27ac-human SUDHL6 immortalized cell line 3 bradley-bernstein ENCODE3 GRCh38 ENCFF070LFK https://www.encodeproject.org/files/ENCFF070LFK/@@download/ENCFF070LFK.bam ENCFF852WWC https://www.encodeproject.org/files/ENCFF852WWC/@@download/ENCFF852WWC.bam 27.5 M 0 26.7 M 0.973 SE 36 36 36 0.0 M 21.7 M 16.1 M 0.586 0.83 0.84 6.69 170 1.46 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/c28856e5-2698-4468-a7eb-e7ad83bdedd3/@@download/cross_correlation_plot/ENCFF893WQJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB877ZVG bradley-bernstein:DNA_Lib 4920 ENCFF893WQJ HiSeq 2500 2016-10-26T22:49:25.446806+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082fg80369F7fQjy59kFjGP ENCSR511OIE https://www.encodeproject.org/experiments/ENCSR511OIE "histone,histone modification,broad histone mark" H3K27me3-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF182RDK https://www.encodeproject.org/files/ENCFF182RDK/@@download/ENCFF182RDK.bam ENCFF365AXK https://www.encodeproject.org/files/ENCFF365AXK/@@download/ENCFF365AXK.bam 66.3 M 0 64.5 M 0.973 SE 36 36 native 0.0 M 49.6 M 47.8 M 0.720 0.98 0.98 47.31 180 1.01 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/edcb8245-df62-4169-86b8-0cc0e2374207/@@download/cross_correlation_plot/ENCFF002BAQ-ENCFF002BAO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB735PSW,ENCLB582ITD" "bradley-bernstein:DNA_Lib 4861,bradley-bernstein:DNA_Lib 4863" "ENCFF002BAO,ENCFF002BAQ" HiSeq 2500 2016-08-09T15:16:09.884900+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPx300369GXvK7gjbvGj85 ENCSR511OIE https://www.encodeproject.org/experiments/ENCSR511OIE "histone,histone modification,broad histone mark" H3K27me3-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF075XIO https://www.encodeproject.org/files/ENCFF075XIO/@@download/ENCFF075XIO.bam ENCFF750NUK https://www.encodeproject.org/files/ENCFF750NUK/@@download/ENCFF750NUK.bam 93.2 M 0 90.1 M 0.967 SE 36 36 native 0.0 M 70.4 M 60.2 M 0.646 0.86 0.87 8.12 190 1.01 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/2be02991-fc26-4dd1-89c8-01e8a57ee728/@@download/cross_correlation_plot/ENCFF002AWF-ENCFF002AUF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB466WSR,ENCLB450ABL" "bradley-bernstein:DNA_Lib 3863,bradley-bernstein:DNA_Lib 3031" "ENCFF002AWF,ENCFF002AUF" HiSeq 2000 2016-08-09T15:16:51.190570+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPx6003696B2ZJvjbxPFk1 ENCSR316KHQ https://www.encodeproject.org/experiments/ENCSR316KHQ "histone,histone modification,broad histone mark" H3K36me3-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF556XFR https://www.encodeproject.org/files/ENCFF556XFR/@@download/ENCFF556XFR.bam ENCFF741YHE https://www.encodeproject.org/files/ENCFF741YHE/@@download/ENCFF741YHE.bam 73.2 M 0 71.4 M 0.976 SE 36 36 36 0.0 M 53.6 M 44.9 M 0.614 0.85 0.85 7.41 200 1.01 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/38229d1b-e6c2-4236-90bb-4850d27427a5/@@download/cross_correlation_plot/ENCFF850OVV-ENCFF323EOD-ENCFF002AWG_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB149NCP,ENCLB035XAR" "bradley-bernstein:DNA_Lib 3033,bradley-bernstein:DNA_Lib 3864" "ENCFF002AWG,ENCFF323EOD,ENCFF850OVV" HiSeq 2000 2016-12-14T23:03:39.465293+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F188b6Q03695ZjjX2BpbF509 ENCSR316KHQ https://www.encodeproject.org/experiments/ENCSR316KHQ "histone,histone modification,broad histone mark" H3K36me3-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF946VAE https://www.encodeproject.org/files/ENCFF946VAE/@@download/ENCFF946VAE.bam ENCFF509AOZ https://www.encodeproject.org/files/ENCFF509AOZ/@@download/ENCFF509AOZ.bam 85.2 M 0 82.8 M 0.971 SE "76,36" 36 36 0.0 M 63.5 M 56.3 M 0.661 0.91 0.91 11.20 155 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/da0d94da-1359-4b05-a1ef-20e610df994d/@@download/cross_correlation_plot/ENCFF197KIX-ENCFF964WDO-ENCFF002AYO_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB190DEU bradley-bernstein:DNA_Lib 4730 "ENCFF002AYO,ENCFF197KIX,ENCFF964WDO" HiSeq 2500 2016-12-14T23:03:34.338350+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F188bG80369J92qZ2Bf6234K ENCSR804MDH https://www.encodeproject.org/experiments/ENCSR804MDH "histone,histone modification,narrow histone mark" H3K4me2-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF069ATU https://www.encodeproject.org/files/ENCFF069ATU/@@download/ENCFF069ATU.bam ENCFF310GYP https://www.encodeproject.org/files/ENCFF310GYP/@@download/ENCFF310GYP.bam 62.8 M 0 61.2 M 0.975 SE 36 36 native 0.0 M 50.4 M 43.1 M 0.687 0.92 0.92 13.08 185 1.27 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/0febb83c-5573-4d24-afb2-5d42e1c6edd7/@@download/cross_correlation_plot/ENCFF072HZW-ENCFF002AXV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB574UBP,ENCLB604ZLM" "bradley-bernstein:DNA_Lib 4728,bradley-bernstein:DNA_Lib 4988" "ENCFF072HZW,ENCFF002AXV" HiSeq 2500 2016-08-09T16:52:11.430571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbpZj0369GGYp0V19j80jK ENCSR804MDH https://www.encodeproject.org/experiments/ENCSR804MDH "histone,histone modification,narrow histone mark" H3K4me2-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF922XIE https://www.encodeproject.org/files/ENCFF922XIE/@@download/ENCFF922XIE.bam ENCFF978LGM https://www.encodeproject.org/files/ENCFF978LGM/@@download/ENCFF978LGM.bam 37.5 M 0 36.8 M 0.981 SE 36 36 native 0.0 M 30.2 M 14.6 M 0.390 0.51 0.50 2.01 190 1.36 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/93dc53d9-d0fb-4e90-a79d-0faed5efc936/@@download/cross_correlation_plot/ENCFF002ATS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB307NLD bradley-bernstein:DNA_Lib 3029 ENCFF002ATS HiSeq 2000 2016-08-09T16:51:27.806468+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV6Z8036972Fz1xj2vY2Zj ENCSR494LJG https://www.encodeproject.org/experiments/ENCSR494LJG "histone,histone modification,narrow histone mark" H3K4me3-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF800LQW https://www.encodeproject.org/files/ENCFF800LQW/@@download/ENCFF800LQW.bam ENCFF655EMP https://www.encodeproject.org/files/ENCFF655EMP/@@download/ENCFF655EMP.bam 48.4 M 0 47.2 M 0.976 SE "76,37" 36 36 0.0 M 36.2 M 33.6 M 0.696 0.93 0.93 15.17 185 1.19 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d32fb76-ac87-4f79-9539-2750f4ec068c/@@download/cross_correlation_plot/ENCFF480CWX-ENCFF074KIQ-ENCFF002BBF_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB365GAB bradley-bernstein:DNA_Lib 4451 "ENCFF074KIQ,ENCFF480CWX,ENCFF002BBF" HiSeq 2500 2016-10-26T22:49:41.518000+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082gjQ0369FFbbzvx9jvx1G ENCSR494LJG https://www.encodeproject.org/experiments/ENCSR494LJG "histone,histone modification,narrow histone mark" H3K4me3-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF071YJS https://www.encodeproject.org/files/ENCFF071YJS/@@download/ENCFF071YJS.bam ENCFF598CAE https://www.encodeproject.org/files/ENCFF598CAE/@@download/ENCFF598CAE.bam 35.3 M 0 34.6 M 0.979 SE 36 36 native 0.0 M 26.5 M 9.1 M 0.256 0.37 0.37 1.76 205 1.12 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/7681c8ea-3378-4fd2-aeee-c99a932fcdf3/@@download/cross_correlation_plot/ENCFF002AUU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB954NXW bradley-bernstein:DNA_Lib 3030 ENCFF002AUU HiSeq 2000 2016-08-09T15:14:39.710440+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZPvXj03691Yz6bfvbgxkYf ENCSR471VHW https://www.encodeproject.org/experiments/ENCSR471VHW "histone,histone modification,broad histone mark" H3K79me2-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF067NXK https://www.encodeproject.org/files/ENCFF067NXK/@@download/ENCFF067NXK.bam ENCFF760CWS https://www.encodeproject.org/files/ENCFF760CWS/@@download/ENCFF760CWS.bam 33.6 M 0 30.9 M 0.921 SE 36 36 native 0.0 M 24.1 M 15.0 M 0.446 0.65 0.64 2.68 215 1.07 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/00ecb8f5-4136-47bc-8b1d-2ea15dc6f934/@@download/cross_correlation_plot/ENCFF002BAX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB834CIO bradley-bernstein:DNA_Lib 3209 ENCFF002BAX HiSeq 2000 2016-11-16T23:57:29.403327+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0fGZ3Q0369JPBYk4Gk5ZjqF ENCSR471VHW https://www.encodeproject.org/experiments/ENCSR471VHW "histone,histone modification,broad histone mark" H3K79me2-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF839OBB https://www.encodeproject.org/files/ENCFF839OBB/@@download/ENCFF839OBB.bam ENCFF561WTP https://www.encodeproject.org/files/ENCFF561WTP/@@download/ENCFF561WTP.bam 35.2 M 0 33.8 M 0.960 SE "37,36" 36 native 0.0 M 25.9 M 24.5 M 0.696 0.96 0.96 27.80 75 1.02 0.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/f04d6b94-04ac-4e75-a9a2-3ecb6eff3b37/@@download/cross_correlation_plot/ENCFF949TRE-ENCFF977NQH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB041PKK bradley-bernstein:DNA_Lib 4460 "ENCFF977NQH,ENCFF949TRE" HiSeq 2500 2016-11-16T23:58:07.968957+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0fGZ800369JPBYk4Gk5ZjqY ENCSR114GLZ https://www.encodeproject.org/experiments/ENCSR114GLZ "histone,histone modification,narrow histone mark" H3K9ac-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF018IUC https://www.encodeproject.org/files/ENCFF018IUC/@@download/ENCFF018IUC.bam ENCFF447KWX https://www.encodeproject.org/files/ENCFF447KWX/@@download/ENCFF447KWX.bam 29.2 M 0 27.1 M 0.930 SE "37,36" 36 native 0.0 M 21.6 M 20.3 M 0.694 0.96 0.96 24.63 305 1.24 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/f31d78d4-2333-4fb3-a9b3-a2561ac129ea/@@download/cross_correlation_plot/ENCFF004MFZ-ENCFF708ICF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB580RBM bradley-bernstein:DNA_Lib 4457 "ENCFF004MFZ,ENCFF708ICF" HiSeq 2500 2016-10-25T21:04:52.020152+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07Jfz80369FG7020ZgQxgYV ENCSR114GLZ https://www.encodeproject.org/experiments/ENCSR114GLZ "histone,histone modification,narrow histone mark" H3K9ac-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF853IRT https://www.encodeproject.org/files/ENCFF853IRT/@@download/ENCFF853IRT.bam ENCFF491DML https://www.encodeproject.org/files/ENCFF491DML/@@download/ENCFF491DML.bam 30.4 M 0 29.8 M 0.980 SE 36 36 native 0.0 M 24.6 M 20.6 M 0.679 0.85 0.86 7.28 215 1.52 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/59f3349f-7f00-4773-8c9d-9a69565d2736/@@download/cross_correlation_plot/ENCFF002BAH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB347WVC bradley-bernstein:DNA_Lib 3207 ENCFF002BAH HiSeq 2000 2016-08-09T16:51:10.525928+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV6p803695yYyVq02XB4VX ENCSR018LUP https://www.encodeproject.org/experiments/ENCSR018LUP "histone,histone modification,broad histone mark" H3K9me2-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF144TDY https://www.encodeproject.org/files/ENCFF144TDY/@@download/ENCFF144TDY.bam ENCFF215VPE https://www.encodeproject.org/files/ENCFF215VPE/@@download/ENCFF215VPE.bam 28.4 M 0 26.4 M 0.929 SE 36 36 native 0.0 M 19.5 M 18.7 M 0.657 0.96 0.96 25.39 195 1.01 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc6fcba3-3e24-4d19-8792-4575ff676475/@@download/cross_correlation_plot/ENCFF002BBS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB865EZS bradley-bernstein:DNA_Lib 3211 ENCFF002BBS HiSeq 2000 2016-11-16T23:55:26.792059+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0fGQ400369KY0272vJfppxy ENCSR018LUP https://www.encodeproject.org/experiments/ENCSR018LUP "histone,histone modification,broad histone mark" H3K9me2-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF280ZUU https://www.encodeproject.org/files/ENCFF280ZUU/@@download/ENCFF280ZUU.bam ENCFF547RHF https://www.encodeproject.org/files/ENCFF547RHF/@@download/ENCFF547RHF.bam 38.5 M 0 37.3 M 0.967 SE "37,36" 36 native 0.0 M 28.2 M 26.7 M 0.693 0.97 0.97 29.70 230 1.01 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bc2fe96-30aa-4ddd-b5e9-9943d8c76458/@@download/cross_correlation_plot/ENCFF932MMU-ENCFF401ZYR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB904QMV bradley-bernstein:DNA_Lib 4462 "ENCFF401ZYR,ENCFF932MMU" HiSeq 2500 2016-11-16T23:57:24.540839+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0fGp5803699vG7gZ92g9Y1K ENCSR587FCM https://www.encodeproject.org/experiments/ENCSR587FCM "histone,histone modification,broad histone mark" H3K9me3-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF253TBK https://www.encodeproject.org/files/ENCFF253TBK/@@download/ENCFF253TBK.bam ENCFF143GWN https://www.encodeproject.org/files/ENCFF143GWN/@@download/ENCFF143GWN.bam 86.1 M 0 79.5 M 0.924 SE "76,36" 36 36 0.0 M 53.9 M 50.0 M 0.581 0.93 0.93 14.59 195 1.01 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/829b0df2-c6f5-435d-ad5e-0ba429e625ef/@@download/cross_correlation_plot/ENCFF764QFH-ENCFF961LWI-ENCFF002AZS_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB419KER bradley-bernstein:DNA_Lib 3210 "ENCFF961LWI,ENCFF764QFH,ENCFF002AZS" "HiSeq 2000,HiSeq 2500" 2017-01-06T01:46:08.641218+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gBqXj03696XBx58qK9x1J0 ENCSR587FCM https://www.encodeproject.org/experiments/ENCSR587FCM "histone,histone modification,broad histone mark" H3K9me3-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF654CAZ https://www.encodeproject.org/files/ENCFF654CAZ/@@download/ENCFF654CAZ.bam ENCFF056QQU https://www.encodeproject.org/files/ENCFF056QQU/@@download/ENCFF056QQU.bam 34.5 M 0 32.4 M 0.940 SE "37,36" 36 36 0.0 M 22.7 M 22.2 M 0.644 0.98 0.98 46.39 250 1.01 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/007225d3-3ed3-4cc1-a401-553c275a1fe8/@@download/cross_correlation_plot/ENCFF522WFY-ENCFF002AZM_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB906CZN bradley-bernstein:DNA_Lib 4461 "ENCFF002AZM,ENCFF522WFY" HiSeq 2500 2017-01-05T23:41:26.138043+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gBqj803696XBx58qK9x1J9 ENCSR538KLU https://www.encodeproject.org/experiments/ENCSR538KLU "histone,histone modification,broad histone mark" H4K20me1-human SUDHL6 immortalized cell line 1 bradley-bernstein ENCODE3 GRCh38 ENCFF062DSE https://www.encodeproject.org/files/ENCFF062DSE/@@download/ENCFF062DSE.bam ENCFF894QNT https://www.encodeproject.org/files/ENCFF894QNT/@@download/ENCFF894QNT.bam 69.7 M 0 67.2 M 0.965 SE 36 36 36 0.0 M 52.2 M 38.6 M 0.554 0.75 0.84 10.49 180 1.01 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/422c2fe1-4065-4f65-a580-58d811b35f1c/@@download/cross_correlation_plot/ENCFF002AWJ-ENCFF002AWH_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB549WJQ,ENCLB420QYR" "bradley-bernstein:DNA_Lib 3034,bradley-bernstein:DNA_Lib 3865" "ENCFF002AWJ,ENCFF002AWH" HiSeq 2000 2017-01-06T01:45:10.779982+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gFqq003696XBx58qK9x1j0 ENCSR538KLU https://www.encodeproject.org/experiments/ENCSR538KLU "histone,histone modification,broad histone mark" H4K20me1-human SUDHL6 immortalized cell line 2 bradley-bernstein ENCODE3 GRCh38 ENCFF150KIC https://www.encodeproject.org/files/ENCFF150KIC/@@download/ENCFF150KIC.bam ENCFF726STZ https://www.encodeproject.org/files/ENCFF726STZ/@@download/ENCFF726STZ.bam 80.2 M 0 77.6 M 0.968 SE "76,36" 36 36 0.0 M 60.9 M 52.1 M 0.650 0.89 0.89 9.11 185 1.01 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/88acfcb4-0280-4a74-9c4b-d5579be08c8c/@@download/cross_correlation_plot/ENCFF725ULT-ENCFF523XGU-ENCFF002AYN_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB315XUH bradley-bernstein:DNA_Lib 4731 "ENCFF725ULT,ENCFF002AYN,ENCFF523XGU" HiSeq 2500 2017-01-06T01:50:48.218963+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1gFv7j036931JZq2ZjbxgbQ ENCSR158PLZ https://www.encodeproject.org/experiments/ENCSR158PLZ control Control-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF301JHG https://www.encodeproject.org/files/ENCFF301JHG/@@download/ENCFF301JHG.bam ENCFF629XDJ https://www.encodeproject.org/files/ENCFF629XDJ/@@download/ENCFF629XDJ.bam 92.2 M 0 89.0 M 0.965 SE 76 76 native 0.0 M 78.5 M 28.0 M 0.303 0.36 0.30 1.30 185 1.03 6.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/de056e68-f825-4292-bfd6-0d7e277f6a6d/@@download/cross_correlation_plot/ENCFF842VLR-ENCFF512OCG-ENCFF351AFB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB308TVO bradley-bernstein:DNA_Lib 7387 "ENCFF512OCG,ENCFF351AFB,ENCFF842VLR" HiSeq 2500 2016-10-27T17:55:39.946001+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08J3280369JgG4ppJK6pGZ7 ENCSR158PLZ https://www.encodeproject.org/experiments/ENCSR158PLZ control Control-human thoracic aorta tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF924RQL https://www.encodeproject.org/files/ENCFF924RQL/@@download/ENCFF924RQL.bam ENCFF892RJZ https://www.encodeproject.org/files/ENCFF892RJZ/@@download/ENCFF892RJZ.bam 79.3 M 0 76.8 M 0.969 SE 76 76 native 0.0 M 67.1 M 62.5 M 0.788 0.93 0.93 14.86 235 1.01 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/de8ba0b4-49ba-4247-bc32-4e825320d3cd/@@download/cross_correlation_plot/ENCFF029CBI-ENCFF549OKT-ENCFF483YDA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB000ORB bradley-bernstein:DNA_Lib 7587 "ENCFF549OKT,ENCFF029CBI,ENCFF483YDA" HiSeq 2500 2016-10-26T20:57:41.421949+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08J3600369FvKVQXxFJj76x ENCSR266XMB https://www.encodeproject.org/experiments/ENCSR266XMB control Control-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF901HZC https://www.encodeproject.org/files/ENCFF901HZC/@@download/ENCFF901HZC.bam ENCFF881SJD https://www.encodeproject.org/files/ENCFF881SJD/@@download/ENCFF881SJD.bam 68.1 M 0 66.0 M 0.968 SE 76 76 native 0.0 M 57.3 M 54.6 M 0.801 0.95 0.96 22.81 225 1.01 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/f87a5042-36cf-45be-abbc-dcaafa194d41/@@download/cross_correlation_plot/ENCFF098NQZ-ENCFF694XOO-ENCFF169IFR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB494EAW bradley-bernstein:DNA_Lib 7523 "ENCFF098NQZ,ENCFF169IFR,ENCFF694XOO" HiSeq 2500 2016-10-30T22:04:41.747121+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0BFVKj0369GZv5fZ4xvzPPY ENCSR015GFK https://www.encodeproject.org/experiments/ENCSR015GFK "histone,histone modification,narrow histone mark" H3K27ac-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF499VQN https://www.encodeproject.org/files/ENCFF499VQN/@@download/ENCFF499VQN.bam ENCFF548FTF https://www.encodeproject.org/files/ENCFF548FTF/@@download/ENCFF548FTF.bam 54.0 M 0 52.4 M 0.970 SE 74 74 native 0.0 M 48.1 M 29.1 M 0.538 0.61 0.57 2.11 170 1.09 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb39a9b9-902c-4c21-8cb6-b876446b769b/@@download/cross_correlation_plot/ENCFF124BGS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB196SNK bradley-bernstein:DNA_Lib 7330 ENCFF124BGS HiSeq 2500 2016-11-11T04:21:06.529972+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XGYK003690VBK7Zv5vZBfp ENCSR015GFK https://www.encodeproject.org/experiments/ENCSR015GFK "histone,histone modification,narrow histone mark" H3K27ac-human thoracic aorta tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF816GNU https://www.encodeproject.org/files/ENCFF816GNU/@@download/ENCFF816GNU.bam ENCFF755ILZ https://www.encodeproject.org/files/ENCFF755ILZ/@@download/ENCFF755ILZ.bam 61.6 M 0 59.4 M 0.964 SE 76 76 native 0.0 M 52.8 M 36.4 M 0.591 0.69 0.67 2.84 205 1.03 2.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/672bcad7-a10b-4c49-8b41-c7f32f81c514/@@download/cross_correlation_plot/ENCFF542CPV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB015LAO bradley-bernstein:DNA_Lib 7513 ENCFF542CPV HiSeq 2500 2016-11-11T04:20:21.230559+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XGXJ00369Jbb6fxbqJq5xq ENCSR318HUC https://www.encodeproject.org/experiments/ENCSR318HUC "histone,histone modification,narrow histone mark" H3K27ac-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF946NGS https://www.encodeproject.org/files/ENCFF946NGS/@@download/ENCFF946NGS.bam ENCFF745KEY https://www.encodeproject.org/files/ENCFF745KEY/@@download/ENCFF745KEY.bam 56.2 M 0 54.6 M 0.971 SE 76 76 native 0.0 M 50.5 M 37.3 M 0.663 0.74 0.73 3.59 240 1.17 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/b10cc9aa-0aa2-4fef-b13e-f47798cc37de/@@download/cross_correlation_plot/ENCFF514FNB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB797IGL bradley-bernstein:DNA_Lib 7514 ENCFF514FNB HiSeq 2500 2016-10-26T19:37:01.757936+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08437j03698JBzYyJKPZBv6 ENCSR939RLS https://www.encodeproject.org/experiments/ENCSR939RLS "histone,histone modification,broad histone mark" H3K27me3-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF786XOM https://www.encodeproject.org/files/ENCFF786XOM/@@download/ENCFF786XOM.bam ENCFF024LFR https://www.encodeproject.org/files/ENCFF024LFR/@@download/ENCFF024LFR.bam 36.6 M 0 35.4 M 0.968 SE 76 76 native 0.0 M 31.3 M 27.4 M 0.750 0.88 0.87 7.83 210 1.01 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d0b2a12-b5a2-4ca3-b65e-627992a2774e/@@download/cross_correlation_plot/ENCFF381CEG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB668IZW bradley-bernstein:DNA_Lib 7551 ENCFF381CEG HiSeq 2500 2016-10-26T19:34:24.964604+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0843F8036934294qbK84JXb ENCSR939RLS https://www.encodeproject.org/experiments/ENCSR939RLS "histone,histone modification,broad histone mark" H3K27me3-human thoracic aorta tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF156BTT https://www.encodeproject.org/files/ENCFF156BTT/@@download/ENCFF156BTT.bam ENCFF143SHN https://www.encodeproject.org/files/ENCFF143SHN/@@download/ENCFF143SHN.bam 32.4 M 0 31.7 M 0.978 SE 76 76 native 0.0 M 28.0 M 25.4 M 0.786 0.91 0.91 10.80 290 1.01 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d1e84a1-cead-498a-99e7-d37b0f9e41c5/@@download/cross_correlation_plot/ENCFF862NUM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB372DRU bradley-bernstein:DNA_Lib 7730 ENCFF862NUM HiSeq 2500 2016-10-26T19:34:53.638625+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0843KQ0369JKJFVg9KK38zQ ENCSR083MAZ https://www.encodeproject.org/experiments/ENCSR083MAZ "histone,histone modification,broad histone mark" H3K36me3-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF726HJQ https://www.encodeproject.org/files/ENCFF726HJQ/@@download/ENCFF726HJQ.bam ENCFF965LDG https://www.encodeproject.org/files/ENCFF965LDG/@@download/ENCFF965LDG.bam 58.8 M 0 57.1 M 0.970 SE 74 74 native 0.0 M 50.1 M 47.1 M 0.801 0.94 0.94 16.64 185 1.01 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/c26a9a04-4bd3-4ac4-8554-0de0346c94b6/@@download/cross_correlation_plot/ENCFF922ATE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB617YGS bradley-bernstein:DNA_Lib 7331 ENCFF922ATE HiSeq 2500 2016-10-26T19:35:29.971014+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0843Vj036934294qbK84JXx ENCSR988DFT https://www.encodeproject.org/experiments/ENCSR988DFT "histone,histone modification,broad histone mark" H3K36me3-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF723LQF https://www.encodeproject.org/files/ENCFF723LQF/@@download/ENCFF723LQF.bam ENCFF270KYZ https://www.encodeproject.org/files/ENCFF270KYZ/@@download/ENCFF270KYZ.bam 33.8 M 0 32.6 M 0.966 SE 76 76 native 0.0 M 28.7 M 28.0 M 0.827 0.98 0.98 45.85 225 1.00 0.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/e81f2d7e-7f00-4a67-bf04-d91bb78e819a/@@download/cross_correlation_plot/ENCFF025URA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB819ZQQ bradley-bernstein:DNA_Lib 7788 ENCFF025URA HiSeq 2500 2016-10-26T19:33:32.877735+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0843vj03692g2Q4k5K0j97g ENCSR988DFT https://www.encodeproject.org/experiments/ENCSR988DFT "histone,histone modification,broad histone mark" H3K36me3-human thoracic aorta tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF591XOF https://www.encodeproject.org/files/ENCFF591XOF/@@download/ENCFF591XOF.bam ENCFF699MWV https://www.encodeproject.org/files/ENCFF699MWV/@@download/ENCFF699MWV.bam 95.1 M 0 92.0 M 0.967 SE 76 76 native 0.0 M 80.7 M 49.3 M 0.518 0.61 0.58 2.14 210 1.02 6.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c17815d-64d7-4b67-b25c-5b9b9239931c/@@download/cross_correlation_plot/ENCFF669TDR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB323KIY bradley-bernstein:DNA_Lib 7512 ENCFF669TDR HiSeq 2500 2016-10-26T19:34:04.889156+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0844000369JgG4ppJK6p7B4 ENCSR416CYZ https://www.encodeproject.org/experiments/ENCSR416CYZ "histone,histone modification,broad histone mark" H3K4me1-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF603NWJ https://www.encodeproject.org/files/ENCFF603NWJ/@@download/ENCFF603NWJ.bam ENCFF363DLO https://www.encodeproject.org/files/ENCFF363DLO/@@download/ENCFF363DLO.bam 52.6 M 0 51.1 M 0.973 SE 76 76 native 0.0 M 46.2 M 43.7 M 0.831 0.95 0.95 18.84 245 1.01 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d760e0a-33d3-49fa-98d3-7bfe5c9e8806/@@download/cross_correlation_plot/ENCFF281PKV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB836PAN bradley-bernstein:DNA_Lib 7787 ENCFF281PKV HiSeq 2500 2016-10-26T15:30:25.094076+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08443Q03694VvqYvxK22vQV ENCSR416CYZ https://www.encodeproject.org/experiments/ENCSR416CYZ "histone,histone modification,broad histone mark" H3K4me1-human thoracic aorta tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF163FKF https://www.encodeproject.org/files/ENCFF163FKF/@@download/ENCFF163FKF.bam ENCFF674MLH https://www.encodeproject.org/files/ENCFF674MLH/@@download/ENCFF674MLH.bam 80.5 M 0 77.9 M 0.967 SE 76 76 native 0.0 M 70.2 M 59.7 M 0.741 0.85 0.85 6.36 225 1.02 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4a2f770-cb7a-4f2e-9200-9ed4e98e9265/@@download/cross_correlation_plot/ENCFF728XGD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB830KBX bradley-bernstein:DNA_Lib 7511 ENCFF728XGD HiSeq 2500 2016-10-26T15:30:21.781732+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08446j0369P876f29P7PjyX ENCSR803IBD https://www.encodeproject.org/experiments/ENCSR803IBD "histone,histone modification,broad histone mark" H3K4me1-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF844GJA https://www.encodeproject.org/files/ENCFF844GJA/@@download/ENCFF844GJA.bam ENCFF247WLB https://www.encodeproject.org/files/ENCFF247WLB/@@download/ENCFF247WLB.bam 49.6 M 0 48.5 M 0.977 SE 76 76 native 0.0 M 45.0 M 41.7 M 0.841 0.93 0.93 13.83 250 1.05 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/744d0cf3-3f91-4385-a2f4-64019a31dc3b/@@download/cross_correlation_plot/ENCFF734RFV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB571ZNZ bradley-bernstein:DNA_Lib 7614 ENCFF734RFV HiSeq 2500 2016-10-26T19:34:36.004104+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0843bQ0369GK9p461P313fG ENCSR930HLX https://www.encodeproject.org/experiments/ENCSR930HLX "histone,histone modification,narrow histone mark" H3K4me3-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF539TCI https://www.encodeproject.org/files/ENCFF539TCI/@@download/ENCFF539TCI.bam ENCFF210VZP https://www.encodeproject.org/files/ENCFF210VZP/@@download/ENCFF210VZP.bam 68.9 M 0 67.1 M 0.974 SE 76 76 native 0.0 M 59.6 M 55.0 M 0.799 0.92 0.93 14.65 235 1.16 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/9125f39a-413e-4bc6-9ac9-432bfc868a0f/@@download/cross_correlation_plot/ENCFF843OCG-ENCFF585KTK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB591CJJ,ENCLB815EFY" "bradley-bernstein:DNA_Lib 7783,bradley-bernstein:DNA_Lib 7505" "ENCFF843OCG,ENCFF585KTK" HiSeq 2500 2016-08-09T16:54:03.923310+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV4Zj03691jjxffj2bKpPv ENCSR930HLX https://www.encodeproject.org/experiments/ENCSR930HLX "histone,histone modification,narrow histone mark" H3K4me3-human thoracic aorta tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF785SOM https://www.encodeproject.org/files/ENCFF785SOM/@@download/ENCFF785SOM.bam ENCFF241EGY https://www.encodeproject.org/files/ENCFF241EGY/@@download/ENCFF241EGY.bam 71.4 M 0 69.3 M 0.971 SE 76 76 native 0.0 M 61.9 M 54.7 M 0.767 0.88 0.89 10.13 220 1.26 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/4464d2c1-b9a6-4082-81e8-84693b5548de/@@download/cross_correlation_plot/ENCFF323KXW-ENCFF985SCY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB636CFZ,ENCLB135ZPG" "bradley-bernstein:DNA_Lib 7781,bradley-bernstein:DNA_Lib 7503" "ENCFF985SCY,ENCFF323KXW" HiSeq 2500 2016-08-09T16:53:55.762527+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV4j803691jjxffj2bKpQ4 ENCSR984KWT https://www.encodeproject.org/experiments/ENCSR984KWT "histone,histone modification,narrow histone mark" H3K4me3-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF653FMK https://www.encodeproject.org/files/ENCFF653FMK/@@download/ENCFF653FMK.bam ENCFF141MPV https://www.encodeproject.org/files/ENCFF141MPV/@@download/ENCFF141MPV.bam 58.4 M 0 56.6 M 0.969 SE "76,74" 74 native 0.0 M 51.0 M 16.1 M 0.275 0.49 0.45 1.63 175 1.33 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/880724e2-b6f2-4756-a641-a13b74c03e0f/@@download/cross_correlation_plot/ENCFF500DGJ-ENCFF796VHA-ENCFF055NME_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB688ZDJ bradley-bernstein:DNA_Lib 7328 "ENCFF796VHA,ENCFF055NME,ENCFF500DGJ" HiSeq 2500 2016-11-17T21:39:01.148715+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0fxy900369BpjBzzvJ0kz7y ENCSR909VUB https://www.encodeproject.org/experiments/ENCSR909VUB "histone,histone modification,broad histone mark" H3K9me3-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF993UDJ https://www.encodeproject.org/files/ENCFF993UDJ/@@download/ENCFF993UDJ.bam ENCFF881DUY https://www.encodeproject.org/files/ENCFF881DUY/@@download/ENCFF881DUY.bam 88.2 M 0 84.9 M 0.963 SE 76 76 native 0.0 M 69.9 M 65.5 M 0.743 0.94 0.94 17.15 225 1.00 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d3bc68f-b40e-4f2f-9547-d393f9af3360/@@download/cross_correlation_plot/ENCFF876TVE-ENCFF519SGN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB042WGU,ENCLB047SNF" "bradley-bernstein:DNA_Lib 7784,bradley-bernstein:DNA_Lib 7506" "ENCFF876TVE,ENCFF519SGN" HiSeq 2500 2016-10-26T15:31:48.103997+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0844BQ036934294qbK84JYF ENCSR909VUB https://www.encodeproject.org/experiments/ENCSR909VUB "histone,histone modification,broad histone mark" H3K9me3-human thoracic aorta tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF087IIL https://www.encodeproject.org/files/ENCFF087IIL/@@download/ENCFF087IIL.bam ENCFF570QNO https://www.encodeproject.org/files/ENCFF570QNO/@@download/ENCFF570QNO.bam 72.8 M 0 69.7 M 0.958 SE 76 76 native 0.0 M 56.3 M 51.5 M 0.708 0.92 0.92 12.88 240 1.00 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5e1a15e-8793-449c-b4e9-055ce7a2d975/@@download/cross_correlation_plot/ENCFF070GIG-ENCFF660ERD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB345YOF,ENCLB361IHP" "bradley-bernstein:DNA_Lib 7782,bradley-bernstein:DNA_Lib 7504" "ENCFF070GIG,ENCFF660ERD" HiSeq 2500 2016-10-26T15:29:52.247020+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0844Jj0369G9kV1j1K1fKFG ENCSR974OMC https://www.encodeproject.org/experiments/ENCSR974OMC "histone,histone modification,broad histone mark" H3K9me3-human thoracic aorta tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF514CZB https://www.encodeproject.org/files/ENCFF514CZB/@@download/ENCFF514CZB.bam ENCFF660URW https://www.encodeproject.org/files/ENCFF660URW/@@download/ENCFF660URW.bam 73.0 M 0 70.2 M 0.962 SE "76,74" 74 74 0.0 M 58.4 M 19.8 M 0.271 0.34 0.29 1.43 200 1.03 3.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/324c7dbc-6faa-47b3-8b6c-703da6e90370/@@download/cross_correlation_plot/ENCFF803SYT-ENCFF644ILC-ENCFF410SLU_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB721HWL bradley-bernstein:DNA_Lib 7325 "ENCFF644ILC,ENCFF803SYT,ENCFF410SLU" HiSeq 2500 2017-01-28T00:44:12.398229+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kj2j0369FYfK85ZjQ44F2 ENCSR164POT https://www.encodeproject.org/experiments/ENCSR164POT control Control-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF079PQP https://www.encodeproject.org/files/ENCFF079PQP/@@download/ENCFF079PQP.bam ENCFF765SNX https://www.encodeproject.org/files/ENCFF765SNX/@@download/ENCFF765SNX.bam 37.7 M 0 36.9 M 0.979 SE 76 None 0.0 M 32.3 M 31.4 M 0.832 0.97 0.98 42.07 215 1.01 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/8869c4f6-736d-4fbb-829d-410e417d70ed/@@download/cross_correlation_plot/ENCFF174BWY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB058OFH bradley-bernstein:DNA_Lib 7441 ENCFF174BWY HiSeq 2500 2016-04-23T06:18:37.990164+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq74803698J82bvQ2XfQb8 ENCSR475NOQ https://www.encodeproject.org/experiments/ENCSR475NOQ control Control-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF111TOF https://www.encodeproject.org/files/ENCFF111TOF/@@download/ENCFF111TOF.bam ENCFF122IYJ https://www.encodeproject.org/files/ENCFF122IYJ/@@download/ENCFF122IYJ.bam 55.1 M 0 52.9 M 0.959 SE 76 76 native 0.0 M 46.9 M 46.0 M 0.835 0.98 0.98 62.75 105 1.00 0.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/54cd2d7a-098e-41ec-8f3e-148e687e06e0/@@download/cross_correlation_plot/ENCFF512TNG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB787GDK bradley-bernstein:DNA_Lib 7948 ENCFF512TNG HiSeq 2500 2016-08-09T16:51:23.894833+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV8VQ0369GFvV7jG2Q3FQ5 ENCSR475NOQ https://www.encodeproject.org/experiments/ENCSR475NOQ control Control-human thyroid gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF517QKI https://www.encodeproject.org/files/ENCFF517QKI/@@download/ENCFF517QKI.bam ENCFF258VRL https://www.encodeproject.org/files/ENCFF258VRL/@@download/ENCFF258VRL.bam 61.9 M 0 59.8 M 0.967 SE 76 76 native 0.0 M 53.2 M 51.8 M 0.837 0.97 0.98 42.29 490 1.00 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/0b39b057-cfa5-4b5f-a274-2bf07bef09fb/@@download/cross_correlation_plot/ENCFF757ZBR-ENCFF676ITE-ENCFF562XOM-ENCFF759ROI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB010YFG bradley-bernstein:DNA_Lib 8228 "ENCFF676ITE,ENCFF759ROI,ENCFF562XOM,ENCFF757ZBR" HiSeq 2500 2016-10-26T20:57:50.544074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08Gzj003692g2Q4k5K0jJKg ENCSR777VQP https://www.encodeproject.org/experiments/ENCSR777VQP control Control-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF464KVS https://www.encodeproject.org/files/ENCFF464KVS/@@download/ENCFF464KVS.bam ENCFF073TSZ https://www.encodeproject.org/files/ENCFF073TSZ/@@download/ENCFF073TSZ.bam 42.9 M 0 41.4 M 0.965 SE 76 None 0.0 M 35.9 M 35.4 M 0.826 0.99 0.99 83.97 245 1.01 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/71d669c9-8fc5-48e5-b89b-ca322404b81e/@@download/cross_correlation_plot/ENCFF297YQY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB429CWK bradley-bernstein:DNA_Lib 7589 ENCFF297YQY HiSeq 2500 2016-04-23T06:19:56.761744+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqZkQ036929FJGg42Xq26k ENCSR203KCB https://www.encodeproject.org/experiments/ENCSR203KCB "histone,histone modification,narrow histone mark" H3K27ac-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF805QHZ https://www.encodeproject.org/files/ENCFF805QHZ/@@download/ENCFF805QHZ.bam ENCFF387JLV https://www.encodeproject.org/files/ENCFF387JLV/@@download/ENCFF387JLV.bam 61.3 M 0 59.6 M 0.974 SE 76 76 native 0.0 M 54.1 M 50.7 M 0.827 0.94 0.94 16.66 250 1.05 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/7bb8ede2-472a-4326-bd0c-25985f3b5975/@@download/cross_correlation_plot/ENCFF209OKJ-ENCFF214DHU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB953TBZ,ENCLB643AYL" "bradley-bernstein:DNA_Lib 7773,bradley-bernstein:DNA_Lib 7771" "ENCFF214DHU,ENCFF209OKJ" HiSeq 2500 2016-08-09T16:49:38.283264+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV8q8036961kVYx02z56P3 ENCSR203KCB https://www.encodeproject.org/experiments/ENCSR203KCB "histone,histone modification,narrow histone mark" H3K27ac-human thyroid gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF422DFO https://www.encodeproject.org/files/ENCFF422DFO/@@download/ENCFF422DFO.bam ENCFF707BTB https://www.encodeproject.org/files/ENCFF707BTB/@@download/ENCFF707BTB.bam 54.2 M 0 52.9 M 0.976 SE 76 76 native 0.0 M 47.9 M 36.7 M 0.678 0.77 0.76 4.00 195 1.05 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/fcd13a47-8f5c-4352-89c8-e34277ab9217/@@download/cross_correlation_plot/ENCFF343NQH-ENCFF330KKH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB858CWL,ENCLB289VGQ" "bradley-bernstein:DNA_Lib 7431,bradley-bernstein:DNA_Lib 7438" "ENCFF330KKH,ENCFF343NQH" HiSeq 2500 2016-08-09T16:48:51.386121+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV8xj036972Fz1xj2vY2gy ENCSR597BWL https://www.encodeproject.org/experiments/ENCSR597BWL "histone,histone modification,narrow histone mark" H3K27ac-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF839GSN https://www.encodeproject.org/files/ENCFF839GSN/@@download/ENCFF839GSN.bam ENCFF851PLB https://www.encodeproject.org/files/ENCFF851PLB/@@download/ENCFF851PLB.bam 35.6 M 0 34.4 M 0.966 SE 76 76 native 0.0 M 30.2 M 29.7 M 0.834 0.98 0.98 66.24 235 1.02 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6464b82-3837-4dd6-8043-bcf4d9578e83/@@download/cross_correlation_plot/ENCFF570KZO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB246KYO bradley-bernstein:DNA_Lib 7564 ENCFF570KZO HiSeq 2500 2016-08-09T16:51:14.151443+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7q003697XQQZkv2f4gb6 ENCSR597BWL https://www.encodeproject.org/experiments/ENCSR597BWL "histone,histone modification,narrow histone mark" H3K27ac-human thyroid gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF603FIA https://www.encodeproject.org/files/ENCFF603FIA/@@download/ENCFF603FIA.bam ENCFF415WBC https://www.encodeproject.org/files/ENCFF415WBC/@@download/ENCFF415WBC.bam 22.4 M 0 21.8 M 0.972 SE 76 76 native 0.0 M 19.4 M 19.1 M 0.851 0.98 0.98 62.78 245 1.01 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/80682b30-19f8-4433-9e24-69ed177656df/@@download/cross_correlation_plot/ENCFF176GZS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB241YFI bradley-bernstein:DNA_Lib 7791 ENCFF176GZS HiSeq 2500 2016-08-09T16:50:35.880391+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV7x8036961kVYx02z56J2 ENCSR716FUH https://www.encodeproject.org/experiments/ENCSR716FUH "histone,histone modification,narrow histone mark" H3K27ac-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF444XGX https://www.encodeproject.org/files/ENCFF444XGX/@@download/ENCFF444XGX.bam ENCFF431OIV https://www.encodeproject.org/files/ENCFF431OIV/@@download/ENCFF431OIV.bam 32.9 M 0 31.5 M 0.959 SE 76 76 native 0.0 M 28.9 M 28.2 M 0.856 0.97 0.97 40.68 225 1.12 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1d839aa-1065-4248-9c2a-0f3fc0241691/@@download/cross_correlation_plot/ENCFF870TZH-ENCFF339ODV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB838IRP bradley-bernstein:DNA_Lib 8067 "ENCFF870TZH,ENCFF339ODV" HiSeq 2500 2016-11-05T00:22:56.412453+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KK1j00369Kp6g71Q4YvJy4 ENCSR582PKH https://www.encodeproject.org/experiments/ENCSR582PKH "histone,histone modification,broad histone mark" H3K27me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF924JKS https://www.encodeproject.org/files/ENCFF924JKS/@@download/ENCFF924JKS.bam ENCFF184SHS https://www.encodeproject.org/files/ENCFF184SHS/@@download/ENCFF184SHS.bam 51.3 M 0 49.9 M 0.972 SE "76,72" 72 native 0.0 M 44.1 M 16.7 M 0.325 0.57 0.52 1.83 170 1.05 6.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/c527b678-0e6b-4468-beed-a6ddfce8d893/@@download/cross_correlation_plot/ENCFF556ZYP-ENCFF388UZO-ENCFF217VZC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB372PGO bradley-bernstein:DNA_Lib 7698 "ENCFF556ZYP,ENCFF388UZO,ENCFF217VZC" HiSeq 2500 2016-10-26T20:55:39.469835+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08J3BQ03694qqQFPkF002Vf ENCSR748LUA https://www.encodeproject.org/experiments/ENCSR748LUA "histone,histone modification,broad histone mark" H3K27me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF249BFZ https://www.encodeproject.org/files/ENCFF249BFZ/@@download/ENCFF249BFZ.bam ENCFF775LHH https://www.encodeproject.org/files/ENCFF775LHH/@@download/ENCFF775LHH.bam 48.5 M 0 46.4 M 0.955 SE 76 76 native 0.0 M 40.3 M 39.6 M 0.816 0.98 0.99 68.36 230 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/58a48da9-ed3a-4b36-a3ea-7b9ec9ccedf5/@@download/cross_correlation_plot/ENCFF753JBR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB840NND bradley-bernstein:DNA_Lib 7561 ENCFF753JBR HiSeq 2500 2016-10-27T22:25:40.056815+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F093JKj0369BqVfYq19ZBbQq ENCSR748LUA https://www.encodeproject.org/experiments/ENCSR748LUA "histone,histone modification,broad histone mark" H3K27me3-human thyroid gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF201WBT https://www.encodeproject.org/files/ENCFF201WBT/@@download/ENCFF201WBT.bam ENCFF054UBG https://www.encodeproject.org/files/ENCFF054UBG/@@download/ENCFF054UBG.bam 32.9 M 0 31.4 M 0.952 SE 76 76 native 0.0 M 27.2 M 26.8 M 0.815 0.99 0.99 83.86 255 1.01 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/62b87a4b-fd92-4c99-aeb7-4fa2a78c1e86/@@download/cross_correlation_plot/ENCFF474ATF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB157TXA bradley-bernstein:DNA_Lib 7560 ENCFF474ATF HiSeq 2500 2016-10-27T22:24:51.381377+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F093JXQ03695YX1xgJBKFypV ENCSR225VCV https://www.encodeproject.org/experiments/ENCSR225VCV "histone,histone modification,broad histone mark" H3K36me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF772BIG https://www.encodeproject.org/files/ENCFF772BIG/@@download/ENCFF772BIG.bam ENCFF004ZYF https://www.encodeproject.org/files/ENCFF004ZYF/@@download/ENCFF004ZYF.bam 24.0 M 0 23.3 M 0.973 SE 76 76 native 0.0 M 20.7 M 17.4 M 0.727 0.84 0.84 5.98 180 1.03 2.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/66a68fa6-b785-446a-9659-4fe481e764bf/@@download/cross_correlation_plot/ENCFF631XQZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB734PTL bradley-bernstein:DNA_Lib 7688 ENCFF631XQZ HiSeq 2500 2016-08-09T16:44:54.465219+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV93803695yYyVq02XB4ZG ENCSR225VCV https://www.encodeproject.org/experiments/ENCSR225VCV "histone,histone modification,broad histone mark" H3K36me3-human thyroid gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF907KVP https://www.encodeproject.org/files/ENCFF907KVP/@@download/ENCFF907KVP.bam ENCFF623IAF https://www.encodeproject.org/files/ENCFF623IAF/@@download/ENCFF623IAF.bam 65.4 M 0 62.4 M 0.953 SE 76 76 native 0.0 M 55.0 M 52.3 M 0.799 0.95 0.95 21.49 190 1.01 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7df5af1-383a-47a1-a37b-af75fae6ad55/@@download/cross_correlation_plot/ENCFF430DXL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB661MLR bradley-bernstein:DNA_Lib 7702 ENCFF430DXL HiSeq 2500 2016-08-09T16:47:46.583735+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV95Q036900FyV0Q3P2pKg ENCSR855XNQ https://www.encodeproject.org/experiments/ENCSR855XNQ "histone,histone modification,broad histone mark" H3K36me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF823WXK https://www.encodeproject.org/files/ENCFF823WXK/@@download/ENCFF823WXK.bam ENCFF546XFW https://www.encodeproject.org/files/ENCFF546XFW/@@download/ENCFF546XFW.bam 69.6 M 0 66.5 M 0.955 SE 76 76 native 0.0 M 59.1 M 57.6 M 0.827 0.98 0.98 44.57 535 1.00 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/4883c4df-4ea1-4542-a8c6-b14aaba47c12/@@download/cross_correlation_plot/ENCFF250BMD-ENCFF246GCY-ENCFF912HPX-ENCFF240MLH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB483WUJ bradley-bernstein:DNA_Lib 8079 "ENCFF250BMD,ENCFF246GCY,ENCFF912HPX,ENCFF240MLH" HiSeq 2500 2016-11-05T00:23:42.690155+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KK2f00369BJ3j0F430p9ZQ ENCSR908DTR https://www.encodeproject.org/experiments/ENCSR908DTR "histone,histone modification,broad histone mark" H3K36me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF527VVQ https://www.encodeproject.org/files/ENCFF527VVQ/@@download/ENCFF527VVQ.bam ENCFF957ZXV https://www.encodeproject.org/files/ENCFF957ZXV/@@download/ENCFF957ZXV.bam 98.3 M 0 95.8 M 0.974 SE 76 76 native 0.0 M 83.5 M 65.4 M 0.665 0.78 0.78 4.28 200 1.01 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/08d37d28-4dde-48e7-954e-4ccaab834c9b/@@download/cross_correlation_plot/ENCFF861LGP-ENCFF916SCK-ENCFF203JBW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB409QRH bradley-bernstein:DNA_Lib 7439 "ENCFF916SCK,ENCFF861LGP,ENCFF203JBW" HiSeq 2500 2017-01-27T05:51:54.653578+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25689Q0369PFk0Y66PvYJPZ ENCSR639NMN https://www.encodeproject.org/experiments/ENCSR639NMN "histone,histone modification,broad histone mark" H3K4me1-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF596GFC https://www.encodeproject.org/files/ENCFF596GFC/@@download/ENCFF596GFC.bam ENCFF675JDA https://www.encodeproject.org/files/ENCFF675JDA/@@download/ENCFF675JDA.bam 51.6 M 0 50.2 M 0.972 SE 76 76 native 0.0 M 44.9 M 40.8 M 0.790 0.91 0.91 11.03 205 1.01 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/00858996-a2f1-40ff-a69a-3feb60017221/@@download/cross_correlation_plot/ENCFF282ACX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB301QVT bradley-bernstein:DNA_Lib 7772 ENCFF282ACX HiSeq 2500 2016-08-09T16:46:16.169101+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV9880369PJFfV2Q3BkKPp ENCSR639NMN https://www.encodeproject.org/experiments/ENCSR639NMN "histone,histone modification,broad histone mark" H3K4me1-human thyroid gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF883DYM https://www.encodeproject.org/files/ENCFF883DYM/@@download/ENCFF883DYM.bam ENCFF276WSV https://www.encodeproject.org/files/ENCFF276WSV/@@download/ENCFF276WSV.bam 38.5 M 0 37.6 M 0.977 SE 76 76 native 0.0 M 33.3 M 32.2 M 0.837 0.97 0.97 32.03 215 1.01 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef5a1745-f8da-46a7-b2cc-9cd98b7de7bc/@@download/cross_correlation_plot/ENCFF209FFG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB306HEK bradley-bernstein:DNA_Lib 7435 ENCFF209FFG HiSeq 2500 2016-08-09T16:45:51.305545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV9Bj036961kVYx02z56PP ENCSR906YES https://www.encodeproject.org/experiments/ENCSR906YES "histone,histone modification,broad histone mark" H3K4me1-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF529ZSI https://www.encodeproject.org/files/ENCFF529ZSI/@@download/ENCFF529ZSI.bam ENCFF979JOB https://www.encodeproject.org/files/ENCFF979JOB/@@download/ENCFF979JOB.bam 42.1 M 0 41.0 M 0.973 SE 76 76 native 0.0 M 36.3 M 34.9 M 0.828 0.96 0.96 25.92 250 1.01 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e01db8e-6527-4ea6-88eb-2fd57193a50a/@@download/cross_correlation_plot/ENCFF279DOM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB831YCC bradley-bernstein:DNA_Lib 7615 ENCFF279DOM HiSeq 2500 2016-10-26T15:29:31.013743+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0844jj0369G9kV1j1K1fKFy ENCSR906YES https://www.encodeproject.org/experiments/ENCSR906YES "histone,histone modification,broad histone mark" H3K4me1-human thyroid gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF213WZZ https://www.encodeproject.org/files/ENCFF213WZZ/@@download/ENCFF213WZZ.bam ENCFF818MSW https://www.encodeproject.org/files/ENCFF818MSW/@@download/ENCFF818MSW.bam 69.7 M 0 67.6 M 0.971 SE 76 76 native 0.0 M 60.2 M 57.6 M 0.827 0.96 0.96 24.27 95 1.00 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f537cbb-f03c-4c89-8b6f-d79a0c291c85/@@download/cross_correlation_plot/ENCFF848HOK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB138IVW bradley-bernstein:DNA_Lib 7795 ENCFF848HOK HiSeq 2500 2016-10-26T15:29:55.653100+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0844qj03692404175P5Q7Gb ENCSR761WVQ https://www.encodeproject.org/experiments/ENCSR761WVQ "histone,histone modification,narrow histone mark" H3K4me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF971DRF https://www.encodeproject.org/files/ENCFF971DRF/@@download/ENCFF971DRF.bam ENCFF873BXQ https://www.encodeproject.org/files/ENCFF873BXQ/@@download/ENCFF873BXQ.bam 26.9 M 0 26.3 M 0.977 SE 76 76 native 0.0 M 23.7 M 23.1 M 0.858 0.98 0.98 44.82 235 1.14 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/49f1a69f-0ed4-48fd-bc9a-bf3cd5a09dee/@@download/cross_correlation_plot/ENCFF987OGP-ENCFF265HWS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB229WTB bradley-bernstein:DNA_Lib 8246 "ENCFF265HWS,ENCFF987OGP" HiSeq 2500 2016-11-05T00:20:13.732897+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KK3Jj0369Fq9ppXVbB93Qj ENCSR901BRV https://www.encodeproject.org/experiments/ENCSR901BRV "histone,histone modification,narrow histone mark" H3K4me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF391MIG https://www.encodeproject.org/files/ENCFF391MIG/@@download/ENCFF391MIG.bam ENCFF325EYQ https://www.encodeproject.org/files/ENCFF325EYQ/@@download/ENCFF325EYQ.bam 33.5 M 0 32.2 M 0.960 SE 76 None 0.0 M 27.9 M 27.6 M 0.823 0.99 0.99 88.23 250 1.02 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/aaa83232-31af-44b8-8f3d-808ad69bca3e/@@download/cross_correlation_plot/ENCFF891DNN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB011KWB bradley-bernstein:DNA_Lib 7559 ENCFF891DNN HiSeq 2500 2016-04-23T06:21:18.399098+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF560036933vjGf5z5Jzgf ENCSR975NOU https://www.encodeproject.org/experiments/ENCSR975NOU "histone,histone modification,narrow histone mark" H3K4me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF787FRP https://www.encodeproject.org/files/ENCFF787FRP/@@download/ENCFF787FRP.bam ENCFF877DGX https://www.encodeproject.org/files/ENCFF877DGX/@@download/ENCFF877DGX.bam 40.4 M 0 39.4 M 0.975 SE 76 76 native 0.0 M 34.3 M 32.6 M 0.806 0.95 0.95 20.28 195 1.03 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/74e1c6ca-ffb8-45c8-b039-649fcdaf9032/@@download/cross_correlation_plot/ENCFF587PXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB145KVC bradley-bernstein:DNA_Lib 7429 ENCFF587PXG HiSeq 2500 2016-10-26T15:29:29.904204+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0844X00369JKJFVg9KK38zy ENCSR975NOU https://www.encodeproject.org/experiments/ENCSR975NOU "histone,histone modification,narrow histone mark" H3K4me3-human thyroid gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF465MFX https://www.encodeproject.org/files/ENCFF465MFX/@@download/ENCFF465MFX.bam ENCFF770LMK https://www.encodeproject.org/files/ENCFF770LMK/@@download/ENCFF770LMK.bam 52.9 M 0 51.4 M 0.973 SE 76 76 native 0.0 M 45.2 M 39.6 M 0.748 0.88 0.88 7.92 220 1.02 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/a62e7755-da00-4768-bf6e-581d7d11bc1f/@@download/cross_correlation_plot/ENCFF659LCS-ENCFF987VPN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB435ERT,ENCLB670LYT" "bradley-bernstein:DNA_Lib 7436,bradley-bernstein:DNA_Lib 7770" "ENCFF987VPN,ENCFF659LCS" HiSeq 2500 2016-10-26T15:29:31.504287+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0844b80369G9kV1j1K1fKFb ENCSR266EYO https://www.encodeproject.org/experiments/ENCSR266EYO "histone,histone modification,broad histone mark" H3K9me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF264SDB https://www.encodeproject.org/files/ENCFF264SDB/@@download/ENCFF264SDB.bam ENCFF550IHW https://www.encodeproject.org/files/ENCFF550IHW/@@download/ENCFF550IHW.bam 40.1 M 0 38.0 M 0.948 SE 76 76 native 0.0 M 32.0 M 30.8 M 0.769 0.96 0.97 31.85 105 1.01 0.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d7e4e03-998d-45de-bc18-3d13a15ef833/@@download/cross_correlation_plot/ENCFF002KAG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB426TAS bradley-bernstein:DNA_Lib 7703 ENCFF002KAG HiSeq 2500 2016-08-09T16:45:45.431443+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV9J8036972Fz1xj2vY2jB ENCSR266EYO https://www.encodeproject.org/experiments/ENCSR266EYO "histone,histone modification,broad histone mark" H3K9me3-human thyroid gland tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF710LBW https://www.encodeproject.org/files/ENCFF710LBW/@@download/ENCFF710LBW.bam ENCFF693NRA https://www.encodeproject.org/files/ENCFF693NRA/@@download/ENCFF693NRA.bam 25.8 M 0 24.9 M 0.965 SE 76 76 native 0.0 M 21.2 M 18.4 M 0.714 0.87 0.87 7.62 180 1.02 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5737d04-94cc-4643-83b0-3f37317debe1/@@download/cross_correlation_plot/ENCFF896WAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB216QPS bradley-bernstein:DNA_Lib 7689 ENCFF896WAN HiSeq 2500 2016-08-09T16:45:15.197452+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZV9Pj0369Kqg9Fjv2vpQBY ENCSR658VPF https://www.encodeproject.org/experiments/ENCSR658VPF "histone,histone modification,broad histone mark" H3K9me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF583LYY https://www.encodeproject.org/files/ENCFF583LYY/@@download/ENCFF583LYY.bam ENCFF829PQB https://www.encodeproject.org/files/ENCFF829PQB/@@download/ENCFF829PQB.bam 46.2 M 0 43.7 M 0.945 SE 76 76 native 0.0 M 37.8 M 36.9 M 0.797 0.98 0.98 46.42 110 1.00 0.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/623890c9-ec51-44eb-83ba-5a0cfae22b22/@@download/cross_correlation_plot/ENCFF767YRV-ENCFF687OWZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB638RCU bradley-bernstein:DNA_Lib 8245 "ENCFF687OWZ,ENCFF767YRV" HiSeq 2500 2016-11-05T00:23:53.662295+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KK1vj036941y6xk1837B7b ENCSR699FHH https://www.encodeproject.org/experiments/ENCSR699FHH "histone,histone modification,broad histone mark" H3K9me3-human thyroid gland tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF412HTQ https://www.encodeproject.org/files/ENCFF412HTQ/@@download/ENCFF412HTQ.bam ENCFF275FLV https://www.encodeproject.org/files/ENCFF275FLV/@@download/ENCFF275FLV.bam 83.2 M 0 79.7 M 0.958 SE 76 None 0.0 M 67.3 M 61.2 M 0.735 0.91 0.91 11.19 205 1.01 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/05395efc-bd4a-4119-ae21-83641d455050/@@download/cross_correlation_plot/ENCFF904JAV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB527LRM bradley-bernstein:DNA_Lib 7440 ENCFF904JAV HiSeq 2500 2016-04-23T06:21:22.124547+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvJF5fj036969xXB01K8XgYz ENCSR950CDM https://www.encodeproject.org/experiments/ENCSR950CDM control Control-human tibial artery tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF809DRE https://www.encodeproject.org/files/ENCFF809DRE/@@download/ENCFF809DRE.bam ENCFF577ISA https://www.encodeproject.org/files/ENCFF577ISA/@@download/ENCFF577ISA.bam 62.6 M 0 60.2 M 0.961 SE 76 76 native 0.0 M 53.5 M 51.7 M 0.825 0.97 0.97 31.92 -440 1.00 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/43421d7a-9318-4803-a8be-70d224968f72/@@download/cross_correlation_plot/ENCFF910RDH-ENCFF574KWA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB997DLM bradley-bernstein:DNA_Lib 8232 "ENCFF574KWA,ENCFF910RDH" HiSeq 2500 2016-10-27T22:04:33.957224+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091X3803693F6GvgxF249jQ ENCSR543DAS https://www.encodeproject.org/experiments/ENCSR543DAS "histone,histone modification,broad histone mark" H3K27me3-human tibial artery tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF863CPD https://www.encodeproject.org/files/ENCFF863CPD/@@download/ENCFF863CPD.bam ENCFF089LWS https://www.encodeproject.org/files/ENCFF089LWS/@@download/ENCFF089LWS.bam 92.8 M 0 90.1 M 0.971 SE 76 76 native 0.0 M 80.0 M 75.4 M 0.813 0.94 0.95 18.59 100 1.00 0.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/b53511e2-412c-4b32-b324-0b3e3fce1a74/@@download/cross_correlation_plot/ENCFF757GNQ-ENCFF428FFJ-ENCFF400OAX-ENCFF737JFB-ENCFF485ZDT-ENCFF496FZZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB010TUT bradley-bernstein:DNA_Lib 8258 "ENCFF757GNQ,ENCFF428FFJ,ENCFF400OAX,ENCFF737JFB,ENCFF485ZDT,ENCFF496FZZ" HiSeq 2500 2017-01-27T05:44:08.244508+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F255fXQ036977vb214XG2Qf3 ENCSR127ZSP https://www.encodeproject.org/experiments/ENCSR127ZSP "histone,histone modification,broad histone mark" H3K36me3-human tibial artery tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF814HUT https://www.encodeproject.org/files/ENCFF814HUT/@@download/ENCFF814HUT.bam ENCFF169ONY https://www.encodeproject.org/files/ENCFF169ONY/@@download/ENCFF169ONY.bam 62.2 M 0 60.3 M 0.970 SE 76 76 native 0.0 M 53.4 M 50.5 M 0.813 0.95 0.95 19.55 290 1.01 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/90e6442a-8c06-4f3b-9631-d0292e84b197/@@download/cross_correlation_plot/ENCFF270PXV-ENCFF449PLS-ENCFF385ODC-ENCFF576NRF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB460WDH bradley-bernstein:DNA_Lib 8259 "ENCFF449PLS,ENCFF576NRF,ENCFF270PXV,ENCFF385ODC" HiSeq 2500 2017-01-26T21:00:57.686883+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24jpp803695ZBFgGYGy9qv4 ENCSR233LCT https://www.encodeproject.org/experiments/ENCSR233LCT "histone,histone modification,broad histone mark" H3K4me1-human tibial artery tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF834LDI https://www.encodeproject.org/files/ENCFF834LDI/@@download/ENCFF834LDI.bam ENCFF844UMV https://www.encodeproject.org/files/ENCFF844UMV/@@download/ENCFF844UMV.bam 66.7 M 0 65.0 M 0.975 SE 76 76 native 0.0 M 58.1 M 55.3 M 0.830 0.95 0.96 22.68 420 1.00 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/f06e4a6f-8daf-4326-ae5d-19c56be65195/@@download/cross_correlation_plot/ENCFF692XOZ-ENCFF202TKL-ENCFF614NIY-ENCFF439KFD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB558VKV bradley-bernstein:DNA_Lib 8260 "ENCFF202TKL,ENCFF692XOZ,ENCFF439KFD,ENCFF614NIY" HiSeq 2500 2017-01-26T21:00:42.218237+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24jyZ80369424qKP3Yf7zkb ENCSR166VXF https://www.encodeproject.org/experiments/ENCSR166VXF "histone,histone modification,broad histone mark" H3K9me3-human tibial artery tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF280JEU https://www.encodeproject.org/files/ENCFF280JEU/@@download/ENCFF280JEU.bam ENCFF533SVV https://www.encodeproject.org/files/ENCFF533SVV/@@download/ENCFF533SVV.bam 49.6 M 0 47.2 M 0.950 SE 76 76 native 0.0 M 37.8 M 35.8 M 0.722 0.95 0.95 21.56 220 1.01 0.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/59436cb1-9c2c-42d9-8c27-1e727dc5bb57/@@download/cross_correlation_plot/ENCFF048IVK-ENCFF798INH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB882GBE bradley-bernstein:DNA_Lib 8257 "ENCFF798INH,ENCFF048IVK" HiSeq 2500 2016-10-31T13:23:35.540408+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8gy80369Bj2bF0JP9K9qF ENCSR154SJE https://www.encodeproject.org/experiments/ENCSR154SJE control Control-human tibial nerve tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF925HTZ https://www.encodeproject.org/files/ENCFF925HTZ/@@download/ENCFF925HTZ.bam ENCFF460YQD https://www.encodeproject.org/files/ENCFF460YQD/@@download/ENCFF460YQD.bam 66.2 M 0 64.2 M 0.970 SE 76 76 native 0.0 M 57.3 M 55.8 M 0.843 0.97 0.98 43.12 455 1.00 2.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/320d9674-c441-43cf-b68d-4b9f277b1ccb/@@download/cross_correlation_plot/ENCFF476AQS-ENCFF352JIF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB490GZK bradley-bernstein:DNA_Lib 8127 "ENCFF352JIF,ENCFF476AQS" HiSeq 2500 2017-01-26T22:52:30.588676+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2548Yj03695Q259664kQkYv ENCSR771YJT https://www.encodeproject.org/experiments/ENCSR771YJT "histone,histone modification,narrow histone mark" H3K27ac-human tibial nerve tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF286OJD https://www.encodeproject.org/files/ENCFF286OJD/@@download/ENCFF286OJD.bam ENCFF949ASZ https://www.encodeproject.org/files/ENCFF949ASZ/@@download/ENCFF949ASZ.bam 31.5 M 0 30.8 M 0.976 SE 76 76 native 0.0 M 29.0 M 27.8 M 0.880 0.96 0.96 24.14 190 1.15 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/422c2fa8-2ca7-439b-aecc-8f95cda75246/@@download/cross_correlation_plot/ENCFF699EFW-ENCFF075RQB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB983BAB bradley-bernstein:DNA_Lib 8299 "ENCFF699EFW,ENCFF075RQB" HiSeq 2500 2017-01-25T03:09:27.332161+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23yjfj036948gp55VK04vFV ENCSR611YUJ https://www.encodeproject.org/experiments/ENCSR611YUJ "histone,histone modification,broad histone mark" H3K27me3-human tibial nerve tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF201JXX https://www.encodeproject.org/files/ENCFF201JXX/@@download/ENCFF201JXX.bam ENCFF632ZLL https://www.encodeproject.org/files/ENCFF632ZLL/@@download/ENCFF632ZLL.bam 61.8 M 0 60.1 M 0.973 SE 76 76 native 0.0 M 53.7 M 51.1 M 0.827 0.95 0.95 21.22 215 1.00 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ddaef92-e671-4ae3-9790-a47f5ba92eb5/@@download/cross_correlation_plot/ENCFF011LXD-ENCFF595OTK-ENCFF626DTV-ENCFF888EIC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB571VSO bradley-bernstein:DNA_Lib 8300 "ENCFF888EIC,ENCFF595OTK,ENCFF011LXD,ENCFF626DTV" HiSeq 2500 2017-01-25T04:06:57.896531+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23yk6j0369P4Py796zbxF4J ENCSR157ZVP https://www.encodeproject.org/experiments/ENCSR157ZVP "histone,histone modification,broad histone mark" H3K36me3-human tibial nerve tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF951KBV https://www.encodeproject.org/files/ENCFF951KBV/@@download/ENCFF951KBV.bam ENCFF488KFD https://www.encodeproject.org/files/ENCFF488KFD/@@download/ENCFF488KFD.bam 50.9 M 0 49.3 M 0.968 SE 76 76 native 0.0 M 43.5 M 42.0 M 0.825 0.97 0.97 31.85 90 1.01 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/80a2e2e8-1f71-49cf-82ff-7e3f866c877c/@@download/cross_correlation_plot/ENCFF067UQJ-ENCFF019MKQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB904CMO bradley-bernstein:DNA_Lib 8301 "ENCFF067UQJ,ENCFF019MKQ" HiSeq 2500 2017-01-25T05:58:56.858273+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2410Q00369345F196JqzQJ4 ENCSR850RVA https://www.encodeproject.org/experiments/ENCSR850RVA "histone,histone modification,broad histone mark" H3K4me1-human tibial nerve tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF109RHS https://www.encodeproject.org/files/ENCFF109RHS/@@download/ENCFF109RHS.bam ENCFF830EAD https://www.encodeproject.org/files/ENCFF830EAD/@@download/ENCFF830EAD.bam 55.7 M 0 54.0 M 0.971 SE 76 76 native 0.0 M 49.4 M 46.2 M 0.830 0.94 0.94 15.45 195 1.01 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7765356-e2f8-45a8-9d75-d1be8f8adbbd/@@download/cross_correlation_plot/ENCFF728XJE-ENCFF566BRT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB758XBL bradley-bernstein:DNA_Lib 8302 "ENCFF728XJE,ENCFF566BRT" HiSeq 2500 2017-01-25T03:47:22.023171+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23ykJ803693Jf2v97QJ7Y5Q ENCSR314SPW https://www.encodeproject.org/experiments/ENCSR314SPW "histone,histone modification,narrow histone mark" H3K4me3-human tibial nerve tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF256BBM https://www.encodeproject.org/files/ENCFF256BBM/@@download/ENCFF256BBM.bam ENCFF024DWI https://www.encodeproject.org/files/ENCFF024DWI/@@download/ENCFF024DWI.bam 31.0 M 0 29.9 M 0.967 SE 76 76 native 0.0 M 27.0 M 26.1 M 0.845 0.97 0.97 35.49 205 1.10 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/bbdee3ed-8146-43f2-a256-1e3a4e06b7eb/@@download/cross_correlation_plot/ENCFF074KSX-ENCFF934AEA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB897YCH bradley-bernstein:DNA_Lib 8298 "ENCFF934AEA,ENCFF074KSX" HiSeq 2500 2017-01-25T03:11:59.982856+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23yjx00369F2pz096jxpb5q ENCSR479GPU https://www.encodeproject.org/experiments/ENCSR479GPU "histone,histone modification,broad histone mark" H3K9me3-human tibial nerve tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF717FSG https://www.encodeproject.org/files/ENCFF717FSG/@@download/ENCFF717FSG.bam ENCFF929IEW https://www.encodeproject.org/files/ENCFF929IEW/@@download/ENCFF929IEW.bam 83.2 M 0 79.4 M 0.955 SE 76 76 native 0.0 M 66.0 M 62.0 M 0.746 0.94 0.95 18.26 200 1.00 0.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/08f756bd-822c-4bdd-b0ab-a881932cf17f/@@download/cross_correlation_plot/ENCFF974QXJ-ENCFF501ADN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB334YNF bradley-bernstein:DNA_Lib 8297 "ENCFF501ADN,ENCFF974QXJ" HiSeq 2500 2017-01-25T07:28:06.229369+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2411Jj03695JvXVBgKgJYyx ENCSR828XQV https://www.encodeproject.org/experiments/ENCSR828XQV control Control-human transverse colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF665FWN https://www.encodeproject.org/files/ENCFF665FWN/@@download/ENCFF665FWN.bam ENCFF125CBC https://www.encodeproject.org/files/ENCFF125CBC/@@download/ENCFF125CBC.bam 69.1 M 0 66.5 M 0.964 SE 76 76 native 0.0 M 59.1 M 57.6 M 0.834 0.98 0.98 46.63 460 1.00 0.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/eef48cd0-e869-4037-a3cb-05c9c329ae57/@@download/cross_correlation_plot/ENCFF378JTU-ENCFF825KUP-ENCFF361CSC-ENCFF053BKB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB617ECJ,ENCLB242TQJ" "bradley-bernstein:DNA_Lib 8289,bradley-bernstein:DNA_Lib 8061" "ENCFF053BKB,ENCFF361CSC,ENCFF825KUP,ENCFF378JTU" HiSeq 2500 2016-10-27T22:04:13.713871+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091XVj0369J70k2QVF5BjB1 ENCSR208QRN https://www.encodeproject.org/experiments/ENCSR208QRN "histone,histone modification,narrow histone mark" H3K27ac-human transverse colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF423GWR https://www.encodeproject.org/files/ENCFF423GWR/@@download/ENCFF423GWR.bam ENCFF847BWW https://www.encodeproject.org/files/ENCFF847BWW/@@download/ENCFF847BWW.bam 30.6 M 0 29.4 M 0.959 SE 76 76 native 0.0 M 27.1 M 25.1 M 0.818 0.92 0.93 13.59 235 1.21 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/342d7693-9139-449a-bd78-f76880c4cde5/@@download/cross_correlation_plot/ENCFF481TGO-ENCFF359AHW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB169IZI bradley-bernstein:DNA_Lib 8073 "ENCFF481TGO,ENCFF359AHW" HiSeq 2500 2016-10-31T13:20:23.199441+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8kZ803692404175P5YvgY ENCSR840VWD https://www.encodeproject.org/experiments/ENCSR840VWD "histone,histone modification,broad histone mark" H3K27me3-human transverse colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF484XQD https://www.encodeproject.org/files/ENCFF484XQD/@@download/ENCFF484XQD.bam ENCFF212XEZ https://www.encodeproject.org/files/ENCFF212XEZ/@@download/ENCFF212XEZ.bam 62.7 M 0 60.4 M 0.965 SE 76 76 native 0.0 M 53.8 M 51.5 M 0.822 0.96 0.96 24.94 495 1.00 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/1163f2da-dec3-4aad-aadf-93d293d83eaf/@@download/cross_correlation_plot/ENCFF505RVT-ENCFF317UMP-ENCFF138MVU-ENCFF984WAQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB054LWD bradley-bernstein:DNA_Lib 8254 "ENCFF317UMP,ENCFF984WAQ,ENCFF138MVU,ENCFF505RVT" HiSeq 2500 2016-10-31T13:22:57.136543+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8kQ8036913377YJjkvgVV ENCSR791LZY https://www.encodeproject.org/experiments/ENCSR791LZY "histone,histone modification,broad histone mark" H3K4me1-human transverse colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF289QMK https://www.encodeproject.org/files/ENCFF289QMK/@@download/ENCFF289QMK.bam ENCFF170WCR https://www.encodeproject.org/files/ENCFF170WCR/@@download/ENCFF170WCR.bam 53.8 M 0 51.9 M 0.966 SE 76 76 native 0.0 M 46.7 M 45.4 M 0.846 0.97 0.98 42.50 110 1.00 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/073b31b9-61ee-42f2-ac4a-fd6bcc2f69fe/@@download/cross_correlation_plot/ENCFF328VWW-ENCFF904LCG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB814FIR bradley-bernstein:DNA_Lib 8346 "ENCFF328VWW,ENCFF904LCG" HiSeq 2500 2017-01-25T04:01:33.046323+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23ykf003693Jf2v97QJ7Y5p ENCSR933BVL https://www.encodeproject.org/experiments/ENCSR933BVL "histone,histone modification,narrow histone mark" H3K4me3-human transverse colon tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF193YXR https://www.encodeproject.org/files/ENCFF193YXR/@@download/ENCFF193YXR.bam ENCFF445XXT https://www.encodeproject.org/files/ENCFF445XXT/@@download/ENCFF445XXT.bam 126.4 M 0 118.9 M 0.941 SE 76 76 native 0.0 M 105.6 M 101.3 M 0.801 0.96 0.96 26.45 155 1.00 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a99e37d-b590-4625-8f84-cb10feb71850/@@download/cross_correlation_plot/ENCFF399DEU-ENCFF054NOO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB554FUA bradley-bernstein:DNA_Lib 8313 "ENCFF054NOO,ENCFF399DEU" HiSeq 2500 2017-01-25T09:28:15.117850+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2410qj03690448p9JQzZ5XZ ENCSR422TGJ https://www.encodeproject.org/experiments/ENCSR422TGJ control Control-human upper lobe of left lung tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF163YFX https://www.encodeproject.org/files/ENCFF163YFX/@@download/ENCFF163YFX.bam ENCFF080FPV https://www.encodeproject.org/files/ENCFF080FPV/@@download/ENCFF080FPV.bam 54.9 M 0 53.2 M 0.969 SE 76 76 native 0.0 M 47.0 M 46.2 M 0.841 0.98 0.99 69.61 100 1.00 0.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3b55a15-ef4b-4527-925e-5f652098597f/@@download/cross_correlation_plot/ENCFF429SOB-ENCFF328QHK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB007AYV bradley-bernstein:DNA_Lib 8236 "ENCFF429SOB,ENCFF328QHK" HiSeq 2500 2016-10-27T22:03:36.380178+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091VP00369PK6yVbxF5B9GJ ENCSR738SXD https://www.encodeproject.org/experiments/ENCSR738SXD "histone,histone modification,narrow histone mark" H3K27ac-human upper lobe of left lung tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF563DBT https://www.encodeproject.org/files/ENCFF563DBT/@@download/ENCFF563DBT.bam ENCFF625HBV https://www.encodeproject.org/files/ENCFF625HBV/@@download/ENCFF625HBV.bam 30.1 M 0 28.9 M 0.960 SE 76 76 native 0.0 M 26.7 M 25.4 M 0.846 0.95 0.96 23.09 240 1.15 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/4749180e-8459-4cea-912b-48cae8a3ce98/@@download/cross_correlation_plot/ENCFF459LBY-ENCFF949SUD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB929TAJ bradley-bernstein:DNA_Lib 8072 "ENCFF459LBY,ENCFF949SUD" HiSeq 2500 2016-10-31T13:24:06.236690+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8fG80369668063VP6bvV6 ENCSR859MXQ https://www.encodeproject.org/experiments/ENCSR859MXQ "histone,histone modification,broad histone mark" H3K27me3-human upper lobe of left lung tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF316LIQ https://www.encodeproject.org/files/ENCFF316LIQ/@@download/ENCFF316LIQ.bam ENCFF991XNE https://www.encodeproject.org/files/ENCFF991XNE/@@download/ENCFF991XNE.bam 80.3 M 0 75.0 M 0.933 SE 76 76 native 0.0 M 66.4 M 63.8 M 0.794 0.96 0.96 27.21 100 1.00 0.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/684a45f1-582f-4586-8124-d53e8be08101/@@download/cross_correlation_plot/ENCFF954YCB-ENCFF047SQB-ENCFF137EXU-ENCFF139JNY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB592IFV bradley-bernstein:DNA_Lib 8330 "ENCFF137EXU,ENCFF954YCB,ENCFF047SQB,ENCFF139JNY" HiSeq 2500 2017-01-25T07:19:23.237844+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2412Y00369G5q008pbX84f1 ENCSR869GBP https://www.encodeproject.org/experiments/ENCSR869GBP "histone,histone modification,broad histone mark" H3K36me3-human upper lobe of left lung tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF186EXB https://www.encodeproject.org/files/ENCFF186EXB/@@download/ENCFF186EXB.bam ENCFF956UGB https://www.encodeproject.org/files/ENCFF956UGB/@@download/ENCFF956UGB.bam 74.6 M 0 71.5 M 0.959 SE 76 76 native 0.0 M 64.3 M 62.1 M 0.832 0.97 0.97 30.28 215 1.01 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/0828f9db-d5a0-4b0c-8ddd-b923a068595f/@@download/cross_correlation_plot/ENCFF129MTI-ENCFF674LGV-ENCFF870YOK-ENCFF249ZNQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB813VIH bradley-bernstein:DNA_Lib 8084 "ENCFF249ZNQ,ENCFF870YOK,ENCFF129MTI,ENCFF674LGV" HiSeq 2500 2016-10-31T13:25:58.575395+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8fX00369P876f29P7QZyk ENCSR208WDY https://www.encodeproject.org/experiments/ENCSR208WDY "histone,histone modification,narrow histone mark" H3K4me3-human upper lobe of left lung tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF136APR https://www.encodeproject.org/files/ENCFF136APR/@@download/ENCFF136APR.bam ENCFF589ZKH https://www.encodeproject.org/files/ENCFF589ZKH/@@download/ENCFF589ZKH.bam 67.5 M 0 63.1 M 0.935 SE 76 76 native 0.0 M 55.7 M 53.2 M 0.789 0.96 0.96 23.03 190 1.02 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/d83b80a5-ac73-4dab-9810-3e153573adda/@@download/cross_correlation_plot/ENCFF015NLW-ENCFF147ZDW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB572ECE bradley-bernstein:DNA_Lib 8329 "ENCFF147ZDW,ENCFF015NLW" HiSeq 2500 2017-01-25T04:33:36.781391+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23yp5803698k6J89757FQxZ ENCSR979XBX https://www.encodeproject.org/experiments/ENCSR979XBX control Control-human uterus tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF326UUS https://www.encodeproject.org/files/ENCFF326UUS/@@download/ENCFF326UUS.bam ENCFF025UMS https://www.encodeproject.org/files/ENCFF025UMS/@@download/ENCFF025UMS.bam 97.9 M 0 94.9 M 0.970 SE 76 76 native 0.0 M 84.2 M 81.4 M 0.831 0.97 0.97 31.30 220 1.00 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/02da124d-81f1-436f-b86b-504b290cdada/@@download/cross_correlation_plot/ENCFF823DXS-ENCFF396DKW-ENCFF244KIM-ENCFF536BLK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB904QWG,ENCLB644JFK" "bradley-bernstein:DNA_Lib 8230,bradley-bernstein:DNA_Lib 7981" "ENCFF536BLK,ENCFF823DXS,ENCFF396DKW,ENCFF244KIM" HiSeq 2500 2016-10-27T22:08:11.206288+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F091VXQ0369J70k2QVF5Bj9Y ENCSR979XBX https://www.encodeproject.org/experiments/ENCSR979XBX control Control-human uterus tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF429VQL https://www.encodeproject.org/files/ENCFF429VQL/@@download/ENCFF429VQL.bam ENCFF275HQY https://www.encodeproject.org/files/ENCFF275HQY/@@download/ENCFF275HQY.bam 71.4 M 0 69.4 M 0.972 SE 76 76 native 0.0 M 61.9 M 60.2 M 0.843 0.97 0.98 41.06 440 1.00 0.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/da5beca9-581e-4510-a237-9acd666265de/@@download/cross_correlation_plot/ENCFF912VFJ-ENCFF723PEI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB616KSM bradley-bernstein:DNA_Lib 8412 "ENCFF912VFJ,ENCFF723PEI" HiSeq 2500 2017-08-17T20:40:31.801149+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F6Bv66j03695yVv7G0pq3v7j ENCSR249INE https://www.encodeproject.org/experiments/ENCSR249INE "histone,histone modification,narrow histone mark" H3K27ac-human uterus tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF708EIA https://www.encodeproject.org/files/ENCFF708EIA/@@download/ENCFF708EIA.bam ENCFF729CWA https://www.encodeproject.org/files/ENCFF729CWA/@@download/ENCFF729CWA.bam 34.3 M 0 32.7 M 0.954 SE 76 76 native 0.0 M 30.1 M 28.8 M 0.842 0.96 0.96 27.20 205 1.23 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1a2bc9b-544a-41a2-ae96-709592c05ddd/@@download/cross_correlation_plot/ENCFF072KDT-ENCFF654XGY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB643BVJ bradley-bernstein:DNA_Lib 8069 "ENCFF072KDT,ENCFF654XGY" HiSeq 2500 2016-10-31T13:27:14.264457+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F6vZj03698JBzYyJKPbb6g ENCSR620XWM https://www.encodeproject.org/experiments/ENCSR620XWM control Control-human vagina tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF413FRL https://www.encodeproject.org/files/ENCFF413FRL/@@download/ENCFF413FRL.bam ENCFF384MFA https://www.encodeproject.org/files/ENCFF384MFA/@@download/ENCFF384MFA.bam 60.2 M 0 58.2 M 0.967 SE 76 76 native 0.0 M 51.6 M 49.8 M 0.828 0.97 0.97 30.15 495 1.00 0.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/33d7b9a7-2957-4dfe-84af-471392a37e6a/@@download/cross_correlation_plot/ENCFF191LDB-ENCFF855SLP-ENCFF113LEI-ENCFF046RIH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB485MWR bradley-bernstein:DNA_Lib 8124 "ENCFF046RIH,ENCFF113LEI,ENCFF855SLP,ENCFF191LDB" HiSeq 2500 2017-01-31T21:07:59.499543+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28Fjz0036956KvB3zF9YVpK ENCSR718BTD https://www.encodeproject.org/experiments/ENCSR718BTD "histone,histone modification,narrow histone mark" H3K27ac-human vagina tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF081ANG https://www.encodeproject.org/files/ENCFF081ANG/@@download/ENCFF081ANG.bam ENCFF596KTL https://www.encodeproject.org/files/ENCFF596KTL/@@download/ENCFF596KTL.bam 43.0 M 0 40.8 M 0.949 SE 76 76 native 0.0 M 37.8 M 32.7 M 0.760 0.87 0.87 7.95 185 1.38 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0ceca3f-25a4-4846-8498-7c67f423a282/@@download/cross_correlation_plot/ENCFF178BTN-ENCFF095LCX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB777PWZ bradley-bernstein:DNA_Lib 8164 "ENCFF095LCX,ENCFF178BTN" HiSeq 2500 2016-10-31T13:20:16.210983+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8xJ003698B80B4kPK27Qx ENCSR718BTD https://www.encodeproject.org/experiments/ENCSR718BTD "histone,histone modification,narrow histone mark" H3K27ac-human vagina tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF463AZS https://www.encodeproject.org/files/ENCFF463AZS/@@download/ENCFF463AZS.bam ENCFF491YNA https://www.encodeproject.org/files/ENCFF491YNA/@@download/ENCFF491YNA.bam 10.8 M 0 9.6 M 0.894 SE 76 76 native 0.0 M 8.8 M 8.7 M 0.808 0.99 0.99 89.02 205 1.22 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/74db3e0f-ad58-4aac-9c32-32277565578d/@@download/cross_correlation_plot/ENCFF618JJH-ENCFF340HVH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB699GSB bradley-bernstein:DNA_Lib 8204 "ENCFF340HVH,ENCFF618JJH" HiSeq 2500 2016-10-31T13:18:22.217562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8xVQ0369Gy59VJQ1KqfFq ENCSR962MYX https://www.encodeproject.org/experiments/ENCSR962MYX "histone,histone modification,broad histone mark" H3K36me3-human vagina tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF825NJW https://www.encodeproject.org/files/ENCFF825NJW/@@download/ENCFF825NJW.bam ENCFF218GKQ https://www.encodeproject.org/files/ENCFF218GKQ/@@download/ENCFF218GKQ.bam 70.6 M 0 62.4 M 0.884 SE 76 76 native 0.0 M 55.5 M 53.7 M 0.760 0.97 0.97 32.06 510 1.00 0.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/920c1168-253a-4229-90bd-c1f3f9de9256/@@download/cross_correlation_plot/ENCFF261LEN-ENCFF838XQL-ENCFF945SDU-ENCFF086VZW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB483YHJ bradley-bernstein:DNA_Lib 8334 "ENCFF086VZW,ENCFF261LEN,ENCFF945SDU,ENCFF838XQL" HiSeq 2500 2017-01-25T06:46:43.942382+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2411p80369G5q008pbX84bP ENCSR258UUX https://www.encodeproject.org/experiments/ENCSR258UUX "histone,histone modification,narrow histone mark" H3K4me3-human vagina tissue 1 bradley-bernstein ENCODE3 GRCh38 ENCFF841YDH https://www.encodeproject.org/files/ENCFF841YDH/@@download/ENCFF841YDH.bam ENCFF454HUK https://www.encodeproject.org/files/ENCFF454HUK/@@download/ENCFF454HUK.bam 26.4 M 0 24.0 M 0.911 SE 76 76 native 0.0 M 21.3 M 19.8 M 0.751 0.93 0.93 14.48 200 1.18 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ea85ee9-2695-4f1c-b959-dc001f548582/@@download/cross_correlation_plot/ENCFF984ZCU-ENCFF073GFX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB229OXA bradley-bernstein:DNA_Lib 8163 "ENCFF073GFX,ENCFF984ZCU" HiSeq 2500 2016-10-31T13:18:52.233391+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8xf003692404175P5Yvp8 ENCSR258UUX https://www.encodeproject.org/experiments/ENCSR258UUX "histone,histone modification,narrow histone mark" H3K4me3-human vagina tissue 2 bradley-bernstein ENCODE3 GRCh38 ENCFF183YAH https://www.encodeproject.org/files/ENCFF183YAH/@@download/ENCFF183YAH.bam ENCFF098YXK https://www.encodeproject.org/files/ENCFF098YXK/@@download/ENCFF098YXK.bam 31.1 M 0 30.1 M 0.968 SE 76 76 native 0.0 M 26.8 M 25.4 M 0.818 0.95 0.95 20.30 250 1.10 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/2dc25459-403c-475d-b346-1e80e6786e94/@@download/cross_correlation_plot/ENCFF050CNX-ENCFF608IWH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB189VIG bradley-bernstein:DNA_Lib 8194 "ENCFF050CNX,ENCFF608IWH" HiSeq 2500 2016-10-31T13:18:54.777137+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0F8xq00369BgF5f15PFG8bx ENCSR000DPE https://www.encodeproject.org/experiments/ENCSR000DPE control Control-human A549 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF596HJP https://www.encodeproject.org/files/ENCFF596HJP/@@download/ENCFF596HJP.bam ENCFF436BUU https://www.encodeproject.org/files/ENCFF436BUU/@@download/ENCFF436BUU.bam 20.1 M 0 19.8 M 0.987 SE 36 36 native 0.0 M 15.3 M 14.6 M 0.728 0.96 0.96 22.59 145 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/25249001-b8df-4d69-a7ec-a01e65be1a2a/@@download/cross_correlation_plot/ENCFF001GWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB616EJK john-stamatoyannopoulos:DS18301-library ENCFF001GWE Illumina Genome Analyzer 2016-08-09T16:02:20.271116+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7200369G0925gv2xQKzB ENCSR000DPF https://www.encodeproject.org/experiments/ENCSR000DPF "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF905NBP https://www.encodeproject.org/files/ENCFF905NBP/@@download/ENCFF905NBP.bam ENCFF766CZQ https://www.encodeproject.org/files/ENCFF766CZQ/@@download/ENCFF766CZQ.bam 13.4 M 0 12.6 M 0.946 SE 36 36 native 0.0 M 9.8 M 2.2 M 0.167 0.23 0.34 2.22 135 3.93 2.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/a05f267f-4a23-4798-a995-d2beecb5d540/@@download/cross_correlation_plot/ENCFF001GVU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB457BBX john-stamatoyannopoulos:DS18303-library ENCFF001GVU Illumina Genome Analyzer 2016-12-11T02:48:34.758310+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1647vQ03692yykb1zBpz7ZB ENCSR000DPF https://www.encodeproject.org/experiments/ENCSR000DPF "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF677RAA https://www.encodeproject.org/files/ENCFF677RAA/@@download/ENCFF677RAA.bam ENCFF794CLK https://www.encodeproject.org/files/ENCFF794CLK/@@download/ENCFF794CLK.bam 20.4 M 0 18.2 M 0.896 SE 36 36 native 0.0 M 14.3 M 10.8 M 0.531 0.76 0.75 3.94 135 3.00 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/400e699f-410e-49bd-909e-e6b77a4b85dd/@@download/cross_correlation_plot/ENCFF001GWB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB796WHT john-stamatoyannopoulos:DS18302-library ENCFF001GWB Illumina Genome Analyzer 2016-12-11T02:57:50.134131+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164818036993F1b953B4Q31 ENCSR000DPD https://www.encodeproject.org/experiments/ENCSR000DPD "histone,histone modification,narrow histone mark" H3K4me3-human A549 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF027EMA https://www.encodeproject.org/files/ENCFF027EMA/@@download/ENCFF027EMA.bam ENCFF649THN https://www.encodeproject.org/files/ENCFF649THN/@@download/ENCFF649THN.bam 17.1 M 0 16.6 M 0.968 SE 36 36 None 0.0 M 14.4 M 12.3 M 0.720 0.86 0.86 7.47 180 2.34 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a29b3ea-3f8f-4e5d-9ada-88f896d32274/@@download/cross_correlation_plot/ENCFF001EMB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB645KDQ john-stamatoyannopoulos:DS18305-library ENCFF001EMB Illumina Genome Analyzer 2016-08-10T00:10:01.335419+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6F803691gzQyYkvVqVjB ENCSR000DPD https://www.encodeproject.org/experiments/ENCSR000DPD "histone,histone modification,narrow histone mark" H3K4me3-human A549 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF376MDA https://www.encodeproject.org/files/ENCFF376MDA/@@download/ENCFF376MDA.bam ENCFF524AKV https://www.encodeproject.org/files/ENCFF524AKV/@@download/ENCFF524AKV.bam 18.4 M 0 17.7 M 0.964 SE 36 36 None 0.0 M 15.4 M 13.1 M 0.714 0.85 0.86 7.26 190 2.25 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/20b74f2d-252e-447a-8c3c-de4d304ca3f0/@@download/cross_correlation_plot/ENCFF001EMC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB215WFB john-stamatoyannopoulos:DS18304-library ENCFF001EMC Illumina Genome Analyzer 2016-08-10T00:10:59.867304+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6J80369BJvqxV5vxVX2j ENCSR000DSX https://www.encodeproject.org/experiments/ENCSR000DSX control Control-human astrocyte of the cerebellum primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF069XVM https://www.encodeproject.org/files/ENCFF069XVM/@@download/ENCFF069XVM.bam ENCFF908OBD https://www.encodeproject.org/files/ENCFF908OBD/@@download/ENCFF908OBD.bam 31.8 M 0 31.5 M 0.991 SE 36 36 native 0.0 M 24.4 M 24.1 M 0.760 0.99 0.99 105.26 130 1.01 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/1513e4ce-1fcc-4757-be8c-f72d0345efa3/@@download/cross_correlation_plot/ENCFF001HJJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB036OMN john-stamatoyannopoulos:DS18311-library ENCFF001HJJ Illumina Genome Analyzer 2016-08-09T16:02:26.495073+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ8q0036927gfXkG2b30FP ENCSR000DSZ https://www.encodeproject.org/experiments/ENCSR000DSZ "transcription factor,RNA binding protein" CTCF-human astrocyte of the cerebellum primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF955QCB https://www.encodeproject.org/files/ENCFF955QCB/@@download/ENCFF955QCB.bam ENCFF880WAM https://www.encodeproject.org/files/ENCFF880WAM/@@download/ENCFF880WAM.bam 22.0 M 0 17.2 M 0.782 SE 36 36 native 0.0 M 13.3 M 9.9 M 0.449 0.74 0.73 3.56 195 1.51 2.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/c240d9fb-d6c3-47a5-b783-635be13da21e/@@download/cross_correlation_plot/ENCFF001HIV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB638QKU john-stamatoyannopoulos:DS18313-library ENCFF001HIV Illumina Genome Analyzer 2016-12-11T03:42:18.102160+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164pZQ0369BgG8x1ygv1X6y ENCSR000DSZ https://www.encodeproject.org/experiments/ENCSR000DSZ "transcription factor,RNA binding protein" CTCF-human astrocyte of the cerebellum primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF473LHB https://www.encodeproject.org/files/ENCFF473LHB/@@download/ENCFF473LHB.bam ENCFF723TFB https://www.encodeproject.org/files/ENCFF723TFB/@@download/ENCFF723TFB.bam 30.1 M 0 27.7 M 0.920 SE 36 36 native 0.0 M 21.7 M 18.8 M 0.625 0.87 0.88 8.88 145 2.18 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/256a555b-5095-471e-ac96-7c014447a5f4/@@download/cross_correlation_plot/ENCFF001HJE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555CIC john-stamatoyannopoulos:DS18312-library ENCFF001HJE Illumina Genome Analyzer 2016-12-11T03:59:43.793914+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164pk00369BgG8x1ygv1X77 ENCSR000DSY https://www.encodeproject.org/experiments/ENCSR000DSY "histone,histone modification,narrow histone mark" H3K4me3-human astrocyte of the cerebellum primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF401TDE https://www.encodeproject.org/files/ENCFF401TDE/@@download/ENCFF401TDE.bam ENCFF796TQG https://www.encodeproject.org/files/ENCFF796TQG/@@download/ENCFF796TQG.bam 19.9 M 0 17.5 M 0.876 SE 36 36 None 0.0 M 15.6 M 12.5 M 0.625 0.80 0.81 5.40 205 2.98 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/49c34d06-babd-499a-8cb2-728e7c40fbb4/@@download/cross_correlation_plot/ENCFF001FFJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB326XKM john-stamatoyannopoulos:DS18315-library ENCFF001FFJ Illumina Genome Analyzer 2016-08-10T00:15:41.371534+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5v003697yXkpZbvqpJ0j ENCSR000DSY https://www.encodeproject.org/experiments/ENCSR000DSY "histone,histone modification,narrow histone mark" H3K4me3-human astrocyte of the cerebellum primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF779IVE https://www.encodeproject.org/files/ENCFF779IVE/@@download/ENCFF779IVE.bam ENCFF030OND https://www.encodeproject.org/files/ENCFF030OND/@@download/ENCFF030OND.bam 24.9 M 0 23.3 M 0.937 SE 36 36 None 0.0 M 20.8 M 15.4 M 0.621 0.74 0.75 4.36 180 2.73 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b45428d-9c15-49fd-9c09-fcd162c16d93/@@download/cross_correlation_plot/ENCFF001FFR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB960BAR john-stamatoyannopoulos:DS18314-library ENCFF001FFR Illumina Genome Analyzer 2016-08-10T00:15:19.624075+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5yQ0369585gqXkvzxFP0 ENCSR000DSV https://www.encodeproject.org/experiments/ENCSR000DSV control Control-human astrocyte of the spinal cord primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF336OEL https://www.encodeproject.org/files/ENCFF336OEL/@@download/ENCFF336OEL.bam ENCFF033LOS https://www.encodeproject.org/files/ENCFF033LOS/@@download/ENCFF033LOS.bam 32.8 M 0 32.4 M 0.988 SE 36 36 native 0.0 M 24.5 M 24.3 M 0.742 0.99 0.99 193.28 50 1.01 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a6ceb95-8acc-4f13-92e8-8068cfa3dd55/@@download/cross_correlation_plot/ENCFF001HJV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB920EBZ john-stamatoyannopoulos:DS16041-library ENCFF001HJV Illumina Genome Analyzer 2016-08-09T16:02:35.293845+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ8jQ0369J0Bzfkv2XyxKJ ENCSR000DSU https://www.encodeproject.org/experiments/ENCSR000DSU "transcription factor,RNA binding protein" CTCF-human astrocyte of the spinal cord primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF836ZOB https://www.encodeproject.org/files/ENCFF836ZOB/@@download/ENCFF836ZOB.bam ENCFF076NSO https://www.encodeproject.org/files/ENCFF076NSO/@@download/ENCFF076NSO.bam 18.5 M 0 17.5 M 0.948 SE 36 36 native 0.0 M 13.9 M 12.2 M 0.661 0.88 0.89 9.36 100 2.89 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc6a779b-90d2-4953-8589-f59b4271e455/@@download/cross_correlation_plot/ENCFF001HJI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB386TSZ john-stamatoyannopoulos:DS16042-library ENCFF001HJI Illumina Genome Analyzer II 2016-12-10T20:34:14.742975+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162f8j0369PJ8BP63qf1FYG ENCSR000DSU https://www.encodeproject.org/experiments/ENCSR000DSU "transcription factor,RNA binding protein" CTCF-human astrocyte of the spinal cord primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF282WQV https://www.encodeproject.org/files/ENCFF282WQV/@@download/ENCFF282WQV.bam ENCFF426LGK https://www.encodeproject.org/files/ENCFF426LGK/@@download/ENCFF426LGK.bam 22.7 M 0 16.5 M 0.724 SE 36 36 native 0.0 M 12.9 M 12.3 M 0.541 0.95 0.95 22.03 130 1.88 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f4b378d-6dcd-4d43-b182-1a329afd2fae/@@download/cross_correlation_plot/ENCFF001HJH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB337OOQ john-stamatoyannopoulos:DS18987-library ENCFF001HJH Illumina Genome Analyzer II 2016-12-10T20:33:55.839564+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162fK003692f1gp513PxgF5 ENCSR000DSW https://www.encodeproject.org/experiments/ENCSR000DSW "histone,histone modification,narrow histone mark" H3K4me3-human astrocyte of the spinal cord primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF795XOM https://www.encodeproject.org/files/ENCFF795XOM/@@download/ENCFF795XOM.bam ENCFF881EKI https://www.encodeproject.org/files/ENCFF881EKI/@@download/ENCFF881EKI.bam 25.5 M 0 24.8 M 0.970 SE 36 36 None 0.0 M 21.6 M 16.5 M 0.648 0.77 0.78 4.98 150 2.84 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/002935f3-cb14-4014-bd22-52116bcc7340/@@download/cross_correlation_plot/ENCFF001FGC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB966AEG john-stamatoyannopoulos:DS16044-library ENCFF001FGC Illumina Genome Analyzer 2016-08-10T01:14:09.080489+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p9pj0369J0gjYVZgfFVVQ ENCSR000DSW https://www.encodeproject.org/experiments/ENCSR000DSW "histone,histone modification,narrow histone mark" H3K4me3-human astrocyte of the spinal cord primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF055MDH https://www.encodeproject.org/files/ENCFF055MDH/@@download/ENCFF055MDH.bam ENCFF455YZI https://www.encodeproject.org/files/ENCFF455YZI/@@download/ENCFF455YZI.bam 26.4 M 0 25.6 M 0.971 SE 36 36 None 0.0 M 21.5 M 17.6 M 0.668 0.82 0.83 6.47 150 2.55 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/38c9dd7c-6c73-4a87-9024-f90711e65bb1/@@download/cross_correlation_plot/ENCFF001FGF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB624TBB john-stamatoyannopoulos:DS16045-library ENCFF001FGF Illumina Genome Analyzer 2016-08-10T01:14:40.667730+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p9x8036914X4PZVxpP964 ENCSR000DQO https://www.encodeproject.org/experiments/ENCSR000DQO control Control-human B cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF207FGO https://www.encodeproject.org/files/ENCFF207FGO/@@download/ENCFF207FGO.bam ENCFF443JRW https://www.encodeproject.org/files/ENCFF443JRW/@@download/ENCFF443JRW.bam 26.5 M 0 25.9 M 0.978 SE 36 36 native 0.0 M 19.9 M 19.1 M 0.719 0.96 0.96 22.56 125 1.01 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e9c0914-b524-4b5a-a5a3-3c48121b0561/@@download/cross_correlation_plot/ENCFF001HAV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB937VQY john-stamatoyannopoulos:DS18984-library ENCFF001HAV Illumina Genome Analyzer 2016-08-09T16:02:33.863768+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7p00369BB4PPpG2jBj1z ENCSR000DQQ https://www.encodeproject.org/experiments/ENCSR000DQQ control Control-human B cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF390WET https://www.encodeproject.org/files/ENCFF390WET/@@download/ENCFF390WET.bam ENCFF024LIF https://www.encodeproject.org/files/ENCFF024LIF/@@download/ENCFF024LIF.bam 28.0 M 0 27.8 M 0.989 SE 36 36 native 0.0 M 21.3 M 21.2 M 0.755 0.99 0.99 164.36 75 1.01 0.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ec01dd5-8bff-43b8-9339-6796bd328673/@@download/cross_correlation_plot/ENCFF001HAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB166ZID john-stamatoyannopoulos:DS18982-library ENCFF001HAY Illumina Genome Analyzer 2016-08-09T16:02:51.451489+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7vQ0369F97Byg82v2pvK ENCSR000DQP https://www.encodeproject.org/experiments/ENCSR000DQP "histone,histone modification,narrow histone mark" H3K4me3-human B cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF842FEQ https://www.encodeproject.org/files/ENCFF842FEQ/@@download/ENCFF842FEQ.bam ENCFF365RPE https://www.encodeproject.org/files/ENCFF365RPE/@@download/ENCFF365RPE.bam 25.9 M 0 25.3 M 0.979 SE 36 36 None 0.0 M 21.8 M 17.8 M 0.686 0.81 0.83 6.70 180 3.01 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/43844d0d-98e1-495d-86a1-25d81b61b47d/@@download/cross_correlation_plot/ENCFF001ETS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB136CJM john-stamatoyannopoulos:DS18985-library ENCFF001ETS Illumina Genome Analyzer 2016-08-10T01:13:56.126578+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pFzQ0369J0gjYVZgfFVYf ENCSR000DQP https://www.encodeproject.org/experiments/ENCSR000DQP "histone,histone modification,narrow histone mark" H3K4me3-human B cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF642FEV https://www.encodeproject.org/files/ENCFF642FEV/@@download/ENCFF642FEV.bam ENCFF135VLA https://www.encodeproject.org/files/ENCFF135VLA/@@download/ENCFF135VLA.bam 20.6 M 0 20.1 M 0.973 SE 36 36 None 0.0 M 17.0 M 14.3 M 0.696 0.84 0.86 7.64 175 3.05 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/5fd28421-9952-4a06-afb7-3eea0f22660a/@@download/cross_correlation_plot/ENCFF001ETL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB647BFZ john-stamatoyannopoulos:DS18986-library ENCFF001ETL Illumina Genome Analyzer 2016-08-10T01:13:43.549809+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pG2j0369BJjV7XZgY1Jfg ENCSR000DQR https://www.encodeproject.org/experiments/ENCSR000DQR "histone,histone modification,narrow histone mark" H3K4me3-human B cell primary cell 3 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF699RDR https://www.encodeproject.org/files/ENCFF699RDR/@@download/ENCFF699RDR.bam ENCFF213PNH https://www.encodeproject.org/files/ENCFF213PNH/@@download/ENCFF213PNH.bam 23.9 M 0 23.5 M 0.985 SE 36 36 native 0.0 M 20.0 M 17.2 M 0.719 0.86 0.87 8.74 185 2.72 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f28d582-b409-4562-a2dc-9c9332acbb98/@@download/cross_correlation_plot/ENCFF001EUE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB921VAI john-stamatoyannopoulos:DS18983-library ENCFF001EUE Illumina Genome Analyzer 2016-08-20T00:46:52.482802+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZKQ003696k6PjpZ95Bxj7 ENCSR000DQC https://www.encodeproject.org/experiments/ENCSR000DQC control Control-human BE2C immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF540GSY https://www.encodeproject.org/files/ENCFF540GSY/@@download/ENCFF540GSY.bam ENCFF345GLS https://www.encodeproject.org/files/ENCFF345GLS/@@download/ENCFF345GLS.bam 29.0 M 0 28.8 M 0.993 SE 36 36 native 0.0 M 22.7 M 22.0 M 0.761 0.97 0.98 61.17 90 1.02 0.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/09642772-4312-4a4b-bbe7-7ae732e32a43/@@download/cross_correlation_plot/ENCFF001GZT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB401CEG john-stamatoyannopoulos:DS18306-library ENCFF001GZT Illumina Genome Analyzer 2016-08-09T16:03:18.155059+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7X80369FGGBGjG2qk14P ENCSR000DQD https://www.encodeproject.org/experiments/ENCSR000DQD "transcription factor,RNA binding protein" CTCF-human BE2C immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF824XFI https://www.encodeproject.org/files/ENCFF824XFI/@@download/ENCFF824XFI.bam ENCFF822MFC https://www.encodeproject.org/files/ENCFF822MFC/@@download/ENCFF822MFC.bam 26.7 M 0 25.5 M 0.956 SE 36 36 native 0.0 M 20.3 M 17.6 M 0.661 0.87 0.89 10.51 130 2.19 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6f23a5b-bb7e-4773-86f3-eeee29da2813/@@download/cross_correlation_plot/ENCFF001GZI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB433FCU john-stamatoyannopoulos:DS18307-library ENCFF001GZI Illumina Genome Analyzer 2016-12-12T17:17:44.809815+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1620z0036933PVVJ7Qq0122 ENCSR000DQD https://www.encodeproject.org/experiments/ENCSR000DQD "transcription factor,RNA binding protein" CTCF-human BE2C immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF654KYF https://www.encodeproject.org/files/ENCFF654KYF/@@download/ENCFF654KYF.bam ENCFF193RTC https://www.encodeproject.org/files/ENCFF193RTC/@@download/ENCFF193RTC.bam 25.5 M 0 25.0 M 0.983 SE 36 36 native 0.0 M 20.2 M 18.7 M 0.734 0.93 0.94 18.86 150 1.70 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/39a76393-0833-48ff-b190-0931cf05c5c2/@@download/cross_correlation_plot/ENCFF001GZJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB621LGQ john-stamatoyannopoulos:DS18308-library ENCFF001GZJ Illumina Genome Analyzer 2016-12-12T17:17:40.801953+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16213003697K4B1J71pxzJg ENCSR000DQB https://www.encodeproject.org/experiments/ENCSR000DQB "histone,histone modification,narrow histone mark" H3K4me3-human BE2C immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF944HIX https://www.encodeproject.org/files/ENCFF944HIX/@@download/ENCFF944HIX.bam ENCFF520STF https://www.encodeproject.org/files/ENCFF520STF/@@download/ENCFF520STF.bam 24.7 M 0 24.5 M 0.992 SE 36 36 None 0.0 M 21.1 M 18.5 M 0.750 0.88 0.90 11.22 175 1.93 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9947221-5d8e-457a-ab70-06921278b933/@@download/cross_correlation_plot/ENCFF001EQS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB610ZGN john-stamatoyannopoulos:DS18309-library ENCFF001EQS Illumina Genome Analyzer 2016-08-10T01:16:22.909161+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p4F003696fy6Bb5QPyxpq ENCSR000DQB https://www.encodeproject.org/experiments/ENCSR000DQB "histone,histone modification,narrow histone mark" H3K4me3-human BE2C immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF257FKY https://www.encodeproject.org/files/ENCFF257FKY/@@download/ENCFF257FKY.bam ENCFF834AUG https://www.encodeproject.org/files/ENCFF834AUG/@@download/ENCFF834AUG.bam 24.2 M 0 24.0 M 0.993 SE 36 36 None 0.0 M 20.4 M 18.1 M 0.749 0.89 0.91 11.79 200 1.80 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f50a505-9c8d-42bc-b51a-76287b65e642/@@download/cross_correlation_plot/ENCFF001EQW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB557UJZ john-stamatoyannopoulos:DS18310-library ENCFF001EQW Illumina Genome Analyzer 2016-08-10T01:17:31.606121+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p4Kj03697yXkpZbvqpGzJ ENCSR000DTB https://www.encodeproject.org/experiments/ENCSR000DTB control Control-human brain microvascular endothelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF632ZLA https://www.encodeproject.org/files/ENCFF632ZLA/@@download/ENCFF632ZLA.bam ENCFF597YIM https://www.encodeproject.org/files/ENCFF597YIM/@@download/ENCFF597YIM.bam 25.0 M 0 24.7 M 0.988 SE 36 36 native 0.0 M 19.5 M 19.3 M 0.772 0.99 1.00 207.95 105 1.01 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc1fafa9-5cea-4445-bbe6-978ffd673aa3/@@download/cross_correlation_plot/ENCFF001HKF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB020MIS john-stamatoyannopoulos:DS15913-library ENCFF001HKF Illumina Genome Analyzer 2016-08-09T16:02:33.892015+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ8xQ0369FGGBGjG2qk15F ENCSR000DTA https://www.encodeproject.org/experiments/ENCSR000DTA "transcription factor,RNA binding protein" CTCF-human brain microvascular endothelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF828OEW https://www.encodeproject.org/files/ENCFF828OEW/@@download/ENCFF828OEW.bam ENCFF241JIQ https://www.encodeproject.org/files/ENCFF241JIQ/@@download/ENCFF241JIQ.bam 28.1 M 0 26.9 M 0.956 SE 36 36 native 0.0 M 21.9 M 16.0 M 0.567 0.73 0.77 4.81 125 3.93 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/036b628d-ecb8-4edf-92fa-e4c39c69f22c/@@download/cross_correlation_plot/ENCFF001HJX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB030SHE john-stamatoyannopoulos:DS16046-library ENCFF001HJX Illumina Genome Analyzer II 2016-12-10T19:29:14.223884+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Pjj03692pJ09J76g5ffv ENCSR000DTA https://www.encodeproject.org/experiments/ENCSR000DTA "transcription factor,RNA binding protein" CTCF-human brain microvascular endothelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF573EJQ https://www.encodeproject.org/files/ENCFF573EJQ/@@download/ENCFF573EJQ.bam ENCFF491NHY https://www.encodeproject.org/files/ENCFF491NHY/@@download/ENCFF491NHY.bam 19.2 M 0 18.3 M 0.953 SE 36 36 native 0.0 M 14.5 M 13.1 M 0.683 0.91 0.91 11.72 105 2.20 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4efa0e1-c38f-4a2c-8e0b-1b001f3b3757/@@download/cross_correlation_plot/ENCFF001HJW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB076BWS john-stamatoyannopoulos:DS16047-library ENCFF001HJW Illumina Genome Analyzer II 2016-12-10T18:39:53.082407+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Pxj0369BV55708G9qb81 ENCSR000DTC https://www.encodeproject.org/experiments/ENCSR000DTC "histone,histone modification,narrow histone mark" H3K4me3-human brain microvascular endothelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF127RRB https://www.encodeproject.org/files/ENCFF127RRB/@@download/ENCFF127RRB.bam ENCFF495RIM https://www.encodeproject.org/files/ENCFF495RIM/@@download/ENCFF495RIM.bam 27.1 M 0 25.2 M 0.929 SE 36 36 None 0.0 M 21.8 M 16.3 M 0.600 0.75 0.78 5.13 130 2.92 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0fb64a2-fb55-4f18-b9f6-aed04d38d6fc/@@download/cross_correlation_plot/ENCFF001FGQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB658CAT john-stamatoyannopoulos:DS15749-library ENCFF001FGQ Illumina Genome Analyzer 2016-08-10T01:15:18.601744+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p74j0369BJvqxV5vxVX42 ENCSR000DTC https://www.encodeproject.org/experiments/ENCSR000DTC "histone,histone modification,narrow histone mark" H3K4me3-human brain microvascular endothelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF430CRC https://www.encodeproject.org/files/ENCFF430CRC/@@download/ENCFF430CRC.bam ENCFF600QMV https://www.encodeproject.org/files/ENCFF600QMV/@@download/ENCFF600QMV.bam 22.9 M 0 21.7 M 0.946 SE 36 36 None 0.0 M 18.6 M 14.9 M 0.652 0.80 0.82 6.44 130 2.95 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0c2d7a2-3cab-44f2-b95e-de034e4447f4/@@download/cross_correlation_plot/ENCFF001FGR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB280SWQ john-stamatoyannopoulos:DS15748-library ENCFF001FGR Illumina Genome Analyzer 2016-08-10T01:15:04.482231+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7780369BJvqxV5vxVX4B ENCSR000DXG https://www.encodeproject.org/experiments/ENCSR000DXG control Control-human bronchial epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF682GMA https://www.encodeproject.org/files/ENCFF682GMA/@@download/ENCFF682GMA.bam ENCFF948UIP https://www.encodeproject.org/files/ENCFF948UIP/@@download/ENCFF948UIP.bam 18.4 M 0 18.1 M 0.982 SE 36 36 native 0.0 M 13.3 M 13.1 M 0.709 0.99 0.99 78.62 140 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ff5aef3-2e7c-4c38-b152-6a98c4bf0e38/@@download/cross_correlation_plot/ENCFF001HXF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB035VKJ john-stamatoyannopoulos:DS11550-library ENCFF001HXF Illumina Genome Analyzer 2016-08-09T16:00:49.151429+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZFJQ0369FGGBGjG2qk16P ENCSR000DXI https://www.encodeproject.org/experiments/ENCSR000DXI "transcription factor,RNA binding protein" CTCF-human bronchial epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF867JLT https://www.encodeproject.org/files/ENCFF867JLT/@@download/ENCFF867JLT.bam ENCFF813KUX https://www.encodeproject.org/files/ENCFF813KUX/@@download/ENCFF813KUX.bam 14.3 M 0 12.1 M 0.841 SE 36 36 native 0.0 M 9.8 M 5.0 M 0.347 0.51 0.48 1.75 105 7.41 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/94e99dbf-a377-4c7f-9e0a-9b97032e0a78/@@download/cross_correlation_plot/ENCFF001HXB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB624RWD john-stamatoyannopoulos:DS12398-library ENCFF001HXB Illumina Genome Analyzer II 2016-12-11T04:32:08.774991+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165qK003697xKX68qyy2kVj ENCSR000DXI https://www.encodeproject.org/experiments/ENCSR000DXI "transcription factor,RNA binding protein" CTCF-human bronchial epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF110MYH https://www.encodeproject.org/files/ENCFF110MYH/@@download/ENCFF110MYH.bam ENCFF005SIQ https://www.encodeproject.org/files/ENCFF005SIQ/@@download/ENCFF005SIQ.bam 15.6 M 0 13.9 M 0.896 SE 36 36 native 0.0 M 11.4 M 7.2 M 0.464 0.64 0.64 2.77 120 6.47 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec86936d-f0c9-4b2d-9422-04155f1d17c0/@@download/cross_correlation_plot/ENCFF001HXA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB828TFE john-stamatoyannopoulos:DS12397-library ENCFF001HXA Illumina Genome Analyzer II 2016-12-11T04:34:27.074467+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165qY003692BKq0F3V3jFfB ENCSR000DXK https://www.encodeproject.org/experiments/ENCSR000DXK "histone,histone modification,broad histone mark" H3K27me3-human bronchial epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF425HDW https://www.encodeproject.org/files/ENCFF425HDW/@@download/ENCFF425HDW.bam ENCFF140LFM https://www.encodeproject.org/files/ENCFF140LFM/@@download/ENCFF140LFM.bam 16.6 M 0 15.7 M 0.944 SE 36 36 native 0.0 M 12.0 M 11.4 M 0.686 0.95 0.95 20.39 135 1.06 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9bdf169-e411-4eb4-85eb-ca35adaef53b/@@download/cross_correlation_plot/ENCFF001GCT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB518UWI john-stamatoyannopoulos:DS12242-library ENCFF001GCT Illumina Genome Analyzer 2016-10-26T17:37:15.480074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08284j03697KPkyX9BPPq3g ENCSR000DXK https://www.encodeproject.org/experiments/ENCSR000DXK "histone,histone modification,broad histone mark" H3K27me3-human bronchial epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF518FAE https://www.encodeproject.org/files/ENCFF518FAE/@@download/ENCFF518FAE.bam ENCFF570SQN https://www.encodeproject.org/files/ENCFF570SQN/@@download/ENCFF570SQN.bam 17.4 M 0 16.7 M 0.959 SE 36 36 native 0.0 M 12.9 M 12.4 M 0.713 0.97 0.97 29.02 140 1.04 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc28f211-6a8e-4f7d-9704-9d842f779d7d/@@download/cross_correlation_plot/ENCFF001GCU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB372PRH john-stamatoyannopoulos:DS12245-library ENCFF001GCU Illumina Genome Analyzer 2016-10-26T17:37:38.419091+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0828F80369GJ6xQfbB7BkQG ENCSR000DXH https://www.encodeproject.org/experiments/ENCSR000DXH "histone,histone modification,broad histone mark" H3K36me3-human bronchial epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF868XPY https://www.encodeproject.org/files/ENCFF868XPY/@@download/ENCFF868XPY.bam ENCFF815JQK https://www.encodeproject.org/files/ENCFF815JQK/@@download/ENCFF815JQK.bam 33.4 M 0 19.1 M 0.572 SE 36 36 native 0.0 M 13.2 M 12.6 M 0.375 0.95 0.95 20.41 105 1.07 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/dfd9f53d-d2b8-446c-9d7d-80f9edc7c475/@@download/cross_correlation_plot/ENCFF001GDG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB641ROQ john-stamatoyannopoulos:DS12243-library ENCFF001GDG Illumina Genome Analyzer 2016-10-26T17:38:59.623276+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0824p003695YX1xgJBKFBf2 ENCSR000DXH https://www.encodeproject.org/experiments/ENCSR000DXH "histone,histone modification,broad histone mark" H3K36me3-human bronchial epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF743JIC https://www.encodeproject.org/files/ENCFF743JIC/@@download/ENCFF743JIC.bam ENCFF032GVP https://www.encodeproject.org/files/ENCFF032GVP/@@download/ENCFF032GVP.bam 17.5 M 0 16.9 M 0.968 SE 36 36 native 0.0 M 12.7 M 12.2 M 0.699 0.96 0.96 26.53 105 1.06 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/ebe76f69-498b-440f-9156-73c27678af3c/@@download/cross_correlation_plot/ENCFF001GDD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB157WMK john-stamatoyannopoulos:DS12246-library ENCFF001GDD Illumina Genome Analyzer 2016-10-26T17:38:39.560411+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0824z003694q32PPxBJ67F8 ENCSR000DXJ https://www.encodeproject.org/experiments/ENCSR000DXJ "histone,histone modification,narrow histone mark" H3K4me3-human bronchial epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF529CNH https://www.encodeproject.org/files/ENCFF529CNH/@@download/ENCFF529CNH.bam ENCFF641EBF https://www.encodeproject.org/files/ENCFF641EBF/@@download/ENCFF641EBF.bam 15.4 M 0 14.2 M 0.924 SE 36 36 None 0.0 M 12.5 M 10.7 M 0.697 0.86 0.87 7.90 160 3.41 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/d46410ad-a4b9-4a87-ac76-f15e47f6a0a6/@@download/cross_correlation_plot/ENCFF001GDH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB216DGY john-stamatoyannopoulos:DS11577-library ENCFF001GDH Illumina Genome Analyzer 2016-08-10T01:13:56.654512+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p9Gj03699F2k1Gvk7G0F5 ENCSR000DXJ https://www.encodeproject.org/experiments/ENCSR000DXJ "histone,histone modification,narrow histone mark" H3K4me3-human bronchial epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF727PFZ https://www.encodeproject.org/files/ENCFF727PFZ/@@download/ENCFF727PFZ.bam ENCFF637NQC https://www.encodeproject.org/files/ENCFF637NQC/@@download/ENCFF637NQC.bam 16.7 M 0 15.3 M 0.917 SE 36 36 None 0.0 M 13.3 M 11.5 M 0.687 0.86 0.87 8.05 160 3.25 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6c08920-2cee-4f82-95a9-fadf5ec7a868/@@download/cross_correlation_plot/ENCFF001GDQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB861BEN john-stamatoyannopoulos:DS11579-library ENCFF001GDQ Illumina Genome Analyzer 2016-08-10T01:13:56.900401+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p9Kj0369B2VXxG0kKq9fB ENCSR000DQJ https://www.encodeproject.org/experiments/ENCSR000DQJ control Control-human Caco-2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF851MPE https://www.encodeproject.org/files/ENCFF851MPE/@@download/ENCFF851MPE.bam ENCFF863KCT https://www.encodeproject.org/files/ENCFF863KCT/@@download/ENCFF863KCT.bam 17.3 M 0 17.0 M 0.983 SE 36 36 native 0.0 M 12.5 M 12.4 M 0.716 0.99 0.99 151.66 60 1.02 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/38828904-ef2c-4213-a559-bdba90f9dabf/@@download/cross_correlation_plot/ENCFF001HAM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB729FZN john-stamatoyannopoulos:DS13597-library ENCFF001HAM Illumina Genome Analyzer 2016-08-09T16:02:16.455216+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7gQ0369G0925gv2xQP09 ENCSR000DQN https://www.encodeproject.org/experiments/ENCSR000DQN "transcription factor,RNA binding protein" CTCF-human Caco-2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF761FZT https://www.encodeproject.org/files/ENCFF761FZT/@@download/ENCFF761FZT.bam ENCFF252BQZ https://www.encodeproject.org/files/ENCFF252BQZ/@@download/ENCFF252BQZ.bam 31.4 M 0 20.2 M 0.646 SE 36 36 native 0.0 M 16.0 M 8.4 M 0.266 0.52 0.49 1.75 110 2.81 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7269c0b-9cbb-4797-8c11-1fa40b3fb6f4/@@download/cross_correlation_plot/ENCFF001HAI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB586IHD john-stamatoyannopoulos:DS11675-library ENCFF001HAI Illumina Genome Analyzer II 2016-12-11T02:21:42.866666+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163x1803692pJ09J76g5g31 ENCSR000DQN https://www.encodeproject.org/experiments/ENCSR000DQN "transcription factor,RNA binding protein" CTCF-human Caco-2 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF628ZLC https://www.encodeproject.org/files/ENCFF628ZLC/@@download/ENCFF628ZLC.bam ENCFF192OIE https://www.encodeproject.org/files/ENCFF192OIE/@@download/ENCFF192OIE.bam 32.0 M 0 21.5 M 0.670 SE 36 36 native 0.0 M 16.6 M 12.6 M 0.393 0.76 0.75 3.83 100 1.75 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/30a9033c-3cf3-4b3e-bc69-6be330aafb3b/@@download/cross_correlation_plot/ENCFF001HAJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559RFU john-stamatoyannopoulos:DS11674-library ENCFF001HAJ Illumina Genome Analyzer II 2016-12-11T02:27:17.411743+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163x68036933PVVJ7Qq01Q2 ENCSR000DQL https://www.encodeproject.org/experiments/ENCSR000DQL "histone,histone modification,broad histone mark" H3K27me3-human Caco-2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF251WLZ https://www.encodeproject.org/files/ENCFF251WLZ/@@download/ENCFF251WLZ.bam ENCFF053WWW https://www.encodeproject.org/files/ENCFF053WWW/@@download/ENCFF053WWW.bam 19.6 M 0 18.8 M 0.960 SE 36 36 native 0.0 M 14.2 M 13.6 M 0.693 0.95 0.95 22.05 115 1.04 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a6cd470-61e5-4a25-ba6e-43dbe0037be3/@@download/cross_correlation_plot/ENCFF001ESM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB718HDX john-stamatoyannopoulos:DS12221-library ENCFF001ESM Illumina Genome Analyzer 2016-10-26T17:37:38.921703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082KKQ03698F1qV3kBFq34f ENCSR000DQL https://www.encodeproject.org/experiments/ENCSR000DQL "histone,histone modification,broad histone mark" H3K27me3-human Caco-2 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF406MAU https://www.encodeproject.org/files/ENCFF406MAU/@@download/ENCFF406MAU.bam ENCFF107CVF https://www.encodeproject.org/files/ENCFF107CVF/@@download/ENCFF107CVF.bam 17.2 M 0 16.3 M 0.948 SE 36 36 native 0.0 M 12.3 M 11.9 M 0.692 0.97 0.97 30.93 120 1.04 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/a28a31b1-d576-42ec-a149-2034cab39780/@@download/cross_correlation_plot/ENCFF001ESL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB699RRF john-stamatoyannopoulos:DS12218-library ENCFF001ESL Illumina Genome Analyzer 2016-10-26T17:38:07.234118+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082KY80369BqVfYq19ZB933 ENCSR000DQK https://www.encodeproject.org/experiments/ENCSR000DQK "histone,histone modification,broad histone mark" H3K36me3-human Caco-2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF832JQZ https://www.encodeproject.org/files/ENCFF832JQZ/@@download/ENCFF832JQZ.bam ENCFF505BQR https://www.encodeproject.org/files/ENCFF505BQR/@@download/ENCFF505BQR.bam 15.3 M 0 15.0 M 0.981 SE 36 36 native 0.0 M 11.0 M 10.8 M 0.706 0.98 0.98 44.55 110 1.04 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe56fcc3-da69-4460-ab5c-a981bf88c8cb/@@download/cross_correlation_plot/ENCFF001ESV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB863WPK john-stamatoyannopoulos:DS12406-library ENCFF001ESV Illumina Genome Analyzer 2016-10-26T17:38:59.141704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08256Q036923z1QYVBPkq5p ENCSR000DQK https://www.encodeproject.org/experiments/ENCSR000DQK "histone,histone modification,broad histone mark" H3K36me3-human Caco-2 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF281TJP https://www.encodeproject.org/files/ENCFF281TJP/@@download/ENCFF281TJP.bam ENCFF927GFJ https://www.encodeproject.org/files/ENCFF927GFJ/@@download/ENCFF927GFJ.bam 15.2 M 0 14.9 M 0.976 SE 36 36 native 0.0 M 11.0 M 10.7 M 0.702 0.98 0.98 41.23 115 1.04 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/c507ebd2-ed45-4f59-bd9c-20016818fe69/@@download/cross_correlation_plot/ENCFF001ESU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB690FPQ john-stamatoyannopoulos:DS12405-library ENCFF001ESU Illumina Genome Analyzer 2016-10-26T17:38:37.554529+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0825F803695YX1xgJBKFBg9 ENCSR000DQM https://www.encodeproject.org/experiments/ENCSR000DQM "histone,histone modification,narrow histone mark" H3K4me3-human Caco-2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF448CAQ https://www.encodeproject.org/files/ENCFF448CAQ/@@download/ENCFF448CAQ.bam ENCFF674XPB https://www.encodeproject.org/files/ENCFF674XPB/@@download/ENCFF674XPB.bam 15.8 M 0 14.6 M 0.923 SE 36 36 None 0.0 M 12.7 M 11.0 M 0.696 0.87 0.88 8.59 150 2.93 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1b68549-8480-4475-93b0-6dfe899e6733/@@download/cross_correlation_plot/ENCFF001ETA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB197WRI john-stamatoyannopoulos:DS11784-library ENCFF001ETA Illumina Genome Analyzer 2016-08-10T01:13:44.288754+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pFF803695XxB1K8gfxQK9 ENCSR000DQM https://www.encodeproject.org/experiments/ENCSR000DQM "histone,histone modification,narrow histone mark" H3K4me3-human Caco-2 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF069VSC https://www.encodeproject.org/files/ENCFF069VSC/@@download/ENCFF069VSC.bam ENCFF341RLM https://www.encodeproject.org/files/ENCFF341RLM/@@download/ENCFF341RLM.bam 15.9 M 0 15.1 M 0.950 SE 36 36 None 0.0 M 13.0 M 11.4 M 0.718 0.88 0.89 9.29 150 2.81 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/25cee209-a392-4ed2-a930-3f01e08be309/@@download/cross_correlation_plot/ENCFF001ETC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB418KRV john-stamatoyannopoulos:DS11785-library ENCFF001ETC Illumina Genome Analyzer 2016-08-10T01:13:58.371707+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pFJQ036962Q5vYZgxVQG2 ENCSR000DTD https://www.encodeproject.org/experiments/ENCSR000DTD control Control-human cardiac fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF683AKU https://www.encodeproject.org/files/ENCFF683AKU/@@download/ENCFF683AKU.bam ENCFF965YGZ https://www.encodeproject.org/files/ENCFF965YGZ/@@download/ENCFF965YGZ.bam 32.7 M 0 32.3 M 0.988 SE 36 36 native 0.0 M 24.5 M 24.3 M 0.743 0.99 0.99 183.69 105 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/89476a3c-4f3d-485e-8021-a68982b65231/@@download/cross_correlation_plot/ENCFF001HKG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB344GSS john-stamatoyannopoulos:DS15914-library ENCFF001HKG Illumina Genome Analyzer 2016-08-09T16:03:30.496278+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9000369J0Bzfkv2XyxKx ENCSR000DTG https://www.encodeproject.org/experiments/ENCSR000DTG control Control-human cardiac fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF880XKJ https://www.encodeproject.org/files/ENCFF880XKJ/@@download/ENCFF880XKJ.bam ENCFF576BTF https://www.encodeproject.org/files/ENCFF576BTF/@@download/ENCFF576BTF.bam 28.9 M 0 28.3 M 0.979 SE 36 36 native 0.0 M 21.6 M 21.4 M 0.741 0.99 0.99 196.89 85 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/dab0fd52-6ccb-465f-b20e-fa6848f1fd65/@@download/cross_correlation_plot/ENCFF001HKT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB463ERY john-stamatoyannopoulos:DS15915-library ENCFF001HKT Illumina Genome Analyzer 2016-08-09T16:02:29.501398+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ92j03691jjxffj2bKqQX ENCSR000DTF https://www.encodeproject.org/experiments/ENCSR000DTF "transcription factor,RNA binding protein" CTCF-human cardiac fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF708KXW https://www.encodeproject.org/files/ENCFF708KXW/@@download/ENCFF708KXW.bam ENCFF705NLC https://www.encodeproject.org/files/ENCFF705NLC/@@download/ENCFF705NLC.bam 24.6 M 0 23.5 M 0.957 SE 36 36 native 0.0 M 18.8 M 15.7 M 0.639 0.83 0.84 6.77 125 2.69 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/867e9e1e-6cba-4823-bfb7-65d1c3cd2539/@@download/cross_correlation_plot/ENCFF001HKO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB095XQH john-stamatoyannopoulos:DS16048-library ENCFF001HKO Illumina Genome Analyzer II 2017-04-09T03:38:27.221451+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Zk9zj03696Kzj887bG0J1J ENCSR000DTE https://www.encodeproject.org/experiments/ENCSR000DTE "histone,histone modification,narrow histone mark" H3K4me3-human cardiac fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF448RWC https://www.encodeproject.org/files/ENCFF448RWC/@@download/ENCFF448RWC.bam ENCFF473DEB https://www.encodeproject.org/files/ENCFF473DEB/@@download/ENCFF473DEB.bam 19.8 M 0 18.8 M 0.950 SE 36 36 None 0.0 M 15.4 M 12.9 M 0.652 0.84 0.85 6.70 150 2.51 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b8899a3-c018-44d7-ac61-22524ac1ec8b/@@download/cross_correlation_plot/ENCFF001FHB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB084TKL john-stamatoyannopoulos:DS15751-library ENCFF001FHB Illumina Genome Analyzer 2016-08-10T01:16:09.673144+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5Jj03691gzQyYkvVqVgV ENCSR000DTE https://www.encodeproject.org/experiments/ENCSR000DTE "histone,histone modification,narrow histone mark" H3K4me3-human cardiac fibroblast primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF564DWJ https://www.encodeproject.org/files/ENCFF564DWJ/@@download/ENCFF564DWJ.bam ENCFF479KGS https://www.encodeproject.org/files/ENCFF479KGS/@@download/ENCFF479KGS.bam 30.0 M 0 28.5 M 0.950 SE 36 36 None 0.0 M 23.2 M 18.7 M 0.622 0.81 0.81 5.59 145 2.26 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/833cc5cc-439d-4719-a22b-786695b53066/@@download/cross_correlation_plot/ENCFF001FHC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB535PJX john-stamatoyannopoulos:DS15753-library ENCFF001FHC Illumina Genome Analyzer 2016-08-10T01:16:15.082406+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5Pj03691gzQyYkvVqVgk ENCSR000DTH https://www.encodeproject.org/experiments/ENCSR000DTH "histone,histone modification,narrow histone mark" H3K4me3-human cardiac fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF393LTO https://www.encodeproject.org/files/ENCFF393LTO/@@download/ENCFF393LTO.bam ENCFF164NTR https://www.encodeproject.org/files/ENCFF164NTR/@@download/ENCFF164NTR.bam 30.1 M 0 29.1 M 0.966 SE 36 36 native 0.0 M 25.9 M 18.6 M 0.617 0.72 0.74 4.38 130 2.97 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/21fc9136-91ea-4b71-9d8b-e1f4ad42c712/@@download/cross_correlation_plot/ENCFF001FHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB652LVH john-stamatoyannopoulos:DS15754-library ENCFF001FHM Illumina Genome Analyzer 2016-08-20T00:46:44.523918+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZKY003694QXJjqj94ZKzZ ENCSR000DSA https://www.encodeproject.org/experiments/ENCSR000DSA control Control-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF331JTO https://www.encodeproject.org/files/ENCFF331JTO/@@download/ENCFF331JTO.bam ENCFF663QBU https://www.encodeproject.org/files/ENCFF663QBU/@@download/ENCFF663QBU.bam 27.9 M 0 25.7 M 0.922 SE 36 36 native 0.0 M 19.3 M 19.0 M 0.682 0.99 0.99 78.41 65 1.03 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/6595dc82-b1a0-4f4e-822c-a9c16521fded/@@download/cross_correlation_plot/ENCFF001HIR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB710CLL john-stamatoyannopoulos:DS15393-library ENCFF001HIR Illumina Genome Analyzer 2016-08-09T16:02:14.816419+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ8G003696GPBjjv2bkQzP ENCSR000DSB https://www.encodeproject.org/experiments/ENCSR000DSB control Control-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF198VJS https://www.encodeproject.org/files/ENCFF198VJS/@@download/ENCFF198VJS.bam ENCFF722WMU https://www.encodeproject.org/files/ENCFF722WMU/@@download/ENCFF722WMU.bam 22.5 M 0 20.9 M 0.931 SE 36 36 native 0.0 M 15.6 M 15.5 M 0.688 0.99 0.99 109.71 65 1.02 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/4418caa9-ba56-4f7c-b0be-17fc9255f23f/@@download/cross_correlation_plot/ENCFF001HIK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB243OTZ john-stamatoyannopoulos:DS14110-library ENCFF001HIK Illumina Genome Analyzer 2016-08-09T16:02:35.048312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ8KQ0369BB4PPpG2jBj2g ENCSR000DSC https://www.encodeproject.org/experiments/ENCSR000DSC control Control-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF136OPR https://www.encodeproject.org/files/ENCFF136OPR/@@download/ENCFF136OPR.bam ENCFF663QPN https://www.encodeproject.org/files/ENCFF663QPN/@@download/ENCFF663QPN.bam 27.4 M 0 26.1 M 0.953 SE 36 36 native 0.0 M 19.3 M 19.1 M 0.698 0.99 0.99 115.48 75 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc5ad3d0-a852-4e4d-bfa7-bd09be59ce7a/@@download/cross_correlation_plot/ENCFF001HII.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB328HSH john-stamatoyannopoulos:DS15392-library ENCFF001HII Illumina Genome Analyzer 2016-08-09T16:02:19.194684+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ8V003696GPBjjv2bkQzj ENCSR000DSN https://www.encodeproject.org/experiments/ENCSR000DSN control Control-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF504HBF https://www.encodeproject.org/files/ENCFF504HBF/@@download/ENCFF504HBF.bam ENCFF259TIP https://www.encodeproject.org/files/ENCFF259TIP/@@download/ENCFF259TIP.bam 27.1 M 0 23.7 M 0.875 SE 36 36 native 0.0 M 18.6 M 18.1 M 0.668 0.98 0.98 46.41 65 1.02 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e01b8eb-f619-4ec6-8da0-068e3269a7e3/@@download/cross_correlation_plot/ENCFF001HIS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB266ISA john-stamatoyannopoulos:DS14111-library ENCFF001HIS Illumina Genome Analyzer 2016-08-09T16:02:24.008793+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ8YQ0369F97Byg82v2px7 ENCSR000DSJ https://www.encodeproject.org/experiments/ENCSR000DSJ "histone,histone modification,broad histone mark" H3K27me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF025ZMM https://www.encodeproject.org/files/ENCFF025ZMM/@@download/ENCFF025ZMM.bam ENCFF081XCK https://www.encodeproject.org/files/ENCFF081XCK/@@download/ENCFF081XCK.bam 24.4 M 0 21.2 M 0.868 SE 36 36 native 0.0 M 17.8 M 14.7 M 0.601 0.83 0.83 5.93 190 1.06 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/b8110798-c428-4eff-87b0-7d890bde2470/@@download/cross_correlation_plot/ENCFF001FBX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB497ADS john-stamatoyannopoulos:DS14647-library ENCFF001FBX Illumina Genome Analyzer 2016-10-26T17:39:49.078530+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082G1803695YX1xgJBKFF6f ENCSR000DSJ https://www.encodeproject.org/experiments/ENCSR000DSJ "histone,histone modification,broad histone mark" H3K27me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF088PYS https://www.encodeproject.org/files/ENCFF088PYS/@@download/ENCFF088PYS.bam ENCFF277XIT https://www.encodeproject.org/files/ENCFF277XIT/@@download/ENCFF277XIT.bam 24.5 M 0 23.1 M 0.942 SE 36 36 native 0.0 M 19.1 M 17.1 M 0.696 0.89 0.90 10.35 100 1.06 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/edb9794d-0d4d-4ae5-9f5f-6b02c9e32c72/@@download/cross_correlation_plot/ENCFF001FCA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB949UUK john-stamatoyannopoulos:DS14709-library ENCFF001FCA Illumina Genome Analyzer 2016-10-26T17:39:21.085374+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082G5j0369FFbbzvx9jvvx0 ENCSR000DSK https://www.encodeproject.org/experiments/ENCSR000DSK "histone,histone modification,broad histone mark" H3K27me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF960KYW https://www.encodeproject.org/files/ENCFF960KYW/@@download/ENCFF960KYW.bam ENCFF155IRJ https://www.encodeproject.org/files/ENCFF155IRJ/@@download/ENCFF155IRJ.bam 17.8 M 0 16.2 M 0.913 SE 36 36 native 0.0 M 13.1 M 12.1 M 0.679 0.92 0.93 13.98 140 1.09 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/9cb48c87-caeb-4624-9076-2c7acdbcfd15/@@download/cross_correlation_plot/ENCFF001FBQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB322GIT john-stamatoyannopoulos:DS13778-library ENCFF001FBQ Illumina Genome Analyzer 2016-10-26T17:36:11.562550+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082VPj03697KPkyX9BPPq7X ENCSR000DSK https://www.encodeproject.org/experiments/ENCSR000DSK "histone,histone modification,broad histone mark" H3K27me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF558VBG https://www.encodeproject.org/files/ENCFF558VBG/@@download/ENCFF558VBG.bam ENCFF578TCO https://www.encodeproject.org/files/ENCFF578TCO/@@download/ENCFF578TCO.bam 22.4 M 0 19.6 M 0.878 SE 36 36 native 0.0 M 15.4 M 14.6 M 0.651 0.94 0.95 19.29 100 1.14 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/917319cf-6ec0-4198-9f53-1e377ea030c7/@@download/cross_correlation_plot/ENCFF001FBP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB112XYM john-stamatoyannopoulos:DS14118-library ENCFF001FBP Illumina Genome Analyzer 2016-10-26T17:36:44.504252+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Vbj0369PQyG3V5B44Q98 ENCSR000DSL https://www.encodeproject.org/experiments/ENCSR000DSL "histone,histone modification,broad histone mark" H3K27me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF333ZYU https://www.encodeproject.org/files/ENCFF333ZYU/@@download/ENCFF333ZYU.bam ENCFF868GGX https://www.encodeproject.org/files/ENCFF868GGX/@@download/ENCFF868GGX.bam 26.8 M 0 23.8 M 0.890 SE 36 36 native 0.0 M 19.7 M 13.5 M 0.504 0.69 0.69 3.31 200 1.46 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d3049f9-6e57-4ca3-ad3e-d85f7615aae7/@@download/cross_correlation_plot/ENCFF001FBG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB271XOJ john-stamatoyannopoulos:DS14645-library ENCFF001FBG Illumina Genome Analyzer 2016-10-26T17:38:40.165017+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082GFj0369F7fQjy59kFj1B ENCSR000DSL https://www.encodeproject.org/experiments/ENCSR000DSL "histone,histone modification,broad histone mark" H3K27me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF698VBI https://www.encodeproject.org/files/ENCFF698VBI/@@download/ENCFF698VBI.bam ENCFF772OGV https://www.encodeproject.org/files/ENCFF772OGV/@@download/ENCFF772OGV.bam 24.9 M 0 22.7 M 0.915 SE 36 36 native 0.0 M 18.6 M 15.4 M 0.619 0.83 0.84 6.62 125 1.10 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6cbe63c-6a41-4555-888e-8a65c763a77f/@@download/cross_correlation_plot/ENCFF001FBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB418IDV john-stamatoyannopoulos:DS14708-library ENCFF001FBF Illumina Genome Analyzer 2016-10-26T17:39:00.527908+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082GQj0369KxbFbzV9pvvgY ENCSR000DSM https://www.encodeproject.org/experiments/ENCSR000DSM "histone,histone modification,broad histone mark" H3K27me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF231YIP https://www.encodeproject.org/files/ENCFF231YIP/@@download/ENCFF231YIP.bam ENCFF563MUX https://www.encodeproject.org/files/ENCFF563MUX/@@download/ENCFF563MUX.bam 25.7 M 0 23.1 M 0.897 SE 36 36 native 0.0 M 19.4 M 18.0 M 0.700 0.93 0.93 14.85 145 1.11 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e079790-2eab-419f-b054-44037a1418d7/@@download/cross_correlation_plot/ENCFF001FAX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB767SIL john-stamatoyannopoulos:DS14649-library ENCFF001FAX Illumina Genome Analyzer 2016-10-26T17:39:01.230465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082GbQ0369KxbFbzV9pvvgv ENCSR000DSM https://www.encodeproject.org/experiments/ENCSR000DSM "histone,histone modification,broad histone mark" H3K27me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF207UDF https://www.encodeproject.org/files/ENCFF207UDF/@@download/ENCFF207UDF.bam ENCFF498ZML https://www.encodeproject.org/files/ENCFF498ZML/@@download/ENCFF498ZML.bam 22.1 M 0 21.4 M 0.965 SE 36 36 native 0.0 M 18.4 M 17.5 M 0.789 0.95 0.95 21.83 125 1.07 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/72c74c67-97b9-4281-9e24-18fd3349ec6a/@@download/cross_correlation_plot/ENCFF001FAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB728NPN john-stamatoyannopoulos:DS14122-library ENCFF001FAY Illumina Genome Analyzer 2016-10-26T17:38:34.641289+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Gp8036923pJJqk9xzYx0 ENCSR000DSF https://www.encodeproject.org/experiments/ENCSR000DSF "histone,histone modification,broad histone mark" H3K36me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF657MGX https://www.encodeproject.org/files/ENCFF657MGX/@@download/ENCFF657MGX.bam ENCFF030GOA https://www.encodeproject.org/files/ENCFF030GOA/@@download/ENCFF030GOA.bam 23.5 M 0 22.8 M 0.968 SE 36 36 native 0.0 M 17.7 M 17.3 M 0.733 0.98 0.98 42.87 165 1.04 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/b83d54dc-6a3b-4331-b069-e5789ffb294e/@@download/cross_correlation_plot/ENCFF001FDX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB138FGU john-stamatoyannopoulos:DS14648-library ENCFF001FDX Illumina Genome Analyzer 2016-10-26T17:35:54.739143+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Q9j03698F1qV3kBFq36K ENCSR000DSF https://www.encodeproject.org/experiments/ENCSR000DSF "histone,histone modification,broad histone mark" H3K36me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF548EJO https://www.encodeproject.org/files/ENCFF548EJO/@@download/ENCFF548EJO.bam ENCFF747TBU https://www.encodeproject.org/files/ENCFF747TBU/@@download/ENCFF747TBU.bam 17.7 M 0 15.6 M 0.883 SE 36 36 native 0.0 M 12.5 M 12.3 M 0.697 0.98 0.99 70.78 110 1.04 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/e90ee14b-d87a-4623-8d60-68a203d35260/@@download/cross_correlation_plot/ENCFF001FDV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB082UHX john-stamatoyannopoulos:DS15386-library ENCFF001FDV Illumina Genome Analyzer 2016-10-26T17:36:04.988880+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082QPQ0369KPb3j15B4p8yV ENCSR000DSG https://www.encodeproject.org/experiments/ENCSR000DSG "histone,histone modification,broad histone mark" H3K36me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF988WZS https://www.encodeproject.org/files/ENCFF988WZS/@@download/ENCFF988WZS.bam ENCFF171HXH https://www.encodeproject.org/files/ENCFF171HXH/@@download/ENCFF171HXH.bam 24.4 M 0 23.0 M 0.940 SE 36 36 native 0.0 M 17.3 M 16.8 M 0.689 0.97 0.97 34.47 115 1.05 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/0be0f2a8-a5f2-45f8-9ecd-834fd1ad0176/@@download/cross_correlation_plot/ENCFF001FDP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB817YUT john-stamatoyannopoulos:DS14119-library ENCFF001FDP Illumina Genome Analyzer 2016-10-26T18:07:15.513501+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08233803694q32PPxBJ67B9 ENCSR000DSG https://www.encodeproject.org/experiments/ENCSR000DSG "histone,histone modification,broad histone mark" H3K36me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF110UIN https://www.encodeproject.org/files/ENCFF110UIN/@@download/ENCFF110UIN.bam ENCFF212ICE https://www.encodeproject.org/files/ENCFF212ICE/@@download/ENCFF212ICE.bam 21.1 M 0 20.1 M 0.955 SE 36 36 native 0.0 M 15.1 M 14.8 M 0.701 0.98 0.98 45.90 120 1.05 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba757129-be2a-475b-a895-014c1c4b6033/@@download/cross_correlation_plot/ENCFF001FDQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB610XPT john-stamatoyannopoulos:DS14120-library ENCFF001FDQ Illumina Genome Analyzer 2016-10-26T17:58:55.828081+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08238803699pQzk2JB6K7p9 ENCSR000DSH https://www.encodeproject.org/experiments/ENCSR000DSH "histone,histone modification,broad histone mark" H3K36me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF833YCU https://www.encodeproject.org/files/ENCFF833YCU/@@download/ENCFF833YCU.bam ENCFF849HCO https://www.encodeproject.org/files/ENCFF849HCO/@@download/ENCFF849HCO.bam 20.1 M 0 18.3 M 0.912 SE 36 36 native 0.0 M 14.9 M 14.7 M 0.731 0.98 0.98 66.72 115 1.05 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/24a1c828-103d-4bf2-9d28-ffb2af4c6e61/@@download/cross_correlation_plot/ENCFF001FDE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB726YGT john-stamatoyannopoulos:DS15385-library ENCFF001FDE Illumina Genome Analyzer 2016-10-26T17:35:19.211552+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082QbQ036923z1QYVBPkq97 ENCSR000DSH https://www.encodeproject.org/experiments/ENCSR000DSH "histone,histone modification,broad histone mark" H3K36me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF169OPV https://www.encodeproject.org/files/ENCFF169OPV/@@download/ENCFF169OPV.bam ENCFF416IEX https://www.encodeproject.org/files/ENCFF416IEX/@@download/ENCFF416IEX.bam 27.6 M 0 25.7 M 0.932 SE 36 36 native 0.0 M 20.4 M 19.5 M 0.707 0.96 0.96 24.00 170 1.03 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/4eebb654-61fd-423d-a97e-9cc3146aaf03/@@download/cross_correlation_plot/ENCFF001FDF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB025QUN john-stamatoyannopoulos:DS14646-library ENCFF001FDF Illumina Genome Analyzer 2016-10-26T17:35:52.382039+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Qkj0369GJ6xQfbB7BkYp ENCSR000DSI https://www.encodeproject.org/experiments/ENCSR000DSI "histone,histone modification,broad histone mark" H3K36me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF536EQO https://www.encodeproject.org/files/ENCFF536EQO/@@download/ENCFF536EQO.bam ENCFF226ZDN https://www.encodeproject.org/files/ENCFF226ZDN/@@download/ENCFF226ZDN.bam 15.7 M 0 15.2 M 0.968 SE 36 36 native 0.0 M 12.5 M 12.2 M 0.775 0.98 0.98 49.04 115 1.06 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e9df32c-718a-4356-9699-c993b5feecbd/@@download/cross_correlation_plot/ENCFF001FCP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB046LNX john-stamatoyannopoulos:DS14123-library ENCFF001FCP Illumina Genome Analyzer 2016-10-26T17:42:24.832743+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829Pj0369BqVfYq19ZB91B ENCSR000DSI https://www.encodeproject.org/experiments/ENCSR000DSI "histone,histone modification,broad histone mark" H3K36me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF063WTW https://www.encodeproject.org/files/ENCFF063WTW/@@download/ENCFF063WTW.bam ENCFF513AVV https://www.encodeproject.org/files/ENCFF513AVV/@@download/ENCFF513AVV.bam 28.2 M 0 26.1 M 0.928 SE 36 36 native 0.0 M 21.3 M 20.3 M 0.722 0.96 0.96 22.98 185 1.02 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/48adf6a3-46c8-46e7-abc2-9f58b1fa87f5/@@download/cross_correlation_plot/ENCFF001FCW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB624HPW john-stamatoyannopoulos:DS14650-library ENCFF001FCW Illumina Genome Analyzer 2016-10-26T17:42:59.948906+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829b00369PQyG3V5B44Q47 ENCSR000DSD https://www.encodeproject.org/experiments/ENCSR000DSD "histone,histone modification,narrow histone mark" H3K4me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF747ZHW https://www.encodeproject.org/files/ENCFF747ZHW/@@download/ENCFF747ZHW.bam ENCFF762REY https://www.encodeproject.org/files/ENCFF762REY/@@download/ENCFF762REY.bam 23.2 M 0 18.6 M 0.803 SE 36 36 None 0.0 M 16.0 M 13.3 M 0.571 0.83 0.87 9.67 130 2.26 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/575623fb-306d-4847-b801-de775d9bc69d/@@download/cross_correlation_plot/ENCFF001EZP-ENCFF001EZO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB105UQY john-stamatoyannopoulos:DS14706-library "ENCFF001EZO,ENCFF001EZP" Illumina Genome Analyzer 2016-08-10T01:14:46.427088+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p8yQ03692ZV2Y8jk0GZ1b ENCSR000DSD https://www.encodeproject.org/experiments/ENCSR000DSD "histone,histone modification,narrow histone mark" H3K4me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF968FOC https://www.encodeproject.org/files/ENCFF968FOC/@@download/ENCFF968FOC.bam ENCFF686UZV https://www.encodeproject.org/files/ENCFF686UZV/@@download/ENCFF686UZV.bam 23.1 M 0 20.0 M 0.865 SE 36 36 None 0.0 M 16.9 M 14.7 M 0.635 0.87 0.90 13.43 125 1.76 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ab25932-4fa8-44b9-a025-7402be0a8004/@@download/cross_correlation_plot/ENCFF001EZS-ENCFF001EZR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB068NBV john-stamatoyannopoulos:DS14705-library "ENCFF001EZS,ENCFF001EZR" Illumina Genome Analyzer 2016-08-10T01:14:24.325045+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p90j03695GVBx74k68gp2 ENCSR000DSE https://www.encodeproject.org/experiments/ENCSR000DSE "histone,histone modification,narrow histone mark" H3K4me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF182XLG https://www.encodeproject.org/files/ENCFF182XLG/@@download/ENCFF182XLG.bam ENCFF417LSS https://www.encodeproject.org/files/ENCFF417LSS/@@download/ENCFF417LSS.bam 25.6 M 0 24.3 M 0.947 SE 36 36 None 0.0 M 20.2 M 16.0 M 0.626 0.79 0.81 5.94 140 2.39 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba40a7eb-0330-414b-8c48-1d7ca5175f15/@@download/cross_correlation_plot/ENCFF001EZF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB666DBN john-stamatoyannopoulos:DS14704-library ENCFF001EZF Illumina Genome Analyzer 2016-08-10T01:14:39.148075+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p8kQ03696PF927vk5pY15 ENCSR000DSE https://www.encodeproject.org/experiments/ENCSR000DSE "histone,histone modification,narrow histone mark" H3K4me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF979VBD https://www.encodeproject.org/files/ENCFF979VBD/@@download/ENCFF979VBD.bam ENCFF732IQY https://www.encodeproject.org/files/ENCFF732IQY/@@download/ENCFF732IQY.bam 23.9 M 0 22.5 M 0.939 SE 36 36 None 0.0 M 18.6 M 15.5 M 0.648 0.83 0.85 7.69 135 2.24 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/74294d53-7e51-4419-833d-0fc71c140b10/@@download/cross_correlation_plot/ENCFF001EZG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB217GNQ john-stamatoyannopoulos:DS14703-library ENCFF001EZG Illumina Genome Analyzer 2016-08-10T01:14:39.986920+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p8qj03692ZV2Y8jk0GZ1G ENCSR000DSO https://www.encodeproject.org/experiments/ENCSR000DSO "histone,histone modification,narrow histone mark" H3K4me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF921EQP https://www.encodeproject.org/files/ENCFF921EQP/@@download/ENCFF921EQP.bam ENCFF159DYU https://www.encodeproject.org/files/ENCFF159DYU/@@download/ENCFF159DYU.bam 17.0 M 0 14.5 M 0.855 SE 36 36 None 0.0 M 12.8 M 8.3 M 0.487 0.65 0.71 4.11 165 2.93 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/945492ad-a6eb-4af0-ac42-8a5ffe8f5d2d/@@download/cross_correlation_plot/ENCFF001EZW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB557EWO john-stamatoyannopoulos:DS13777-library ENCFF001EZW Illumina Genome Analyzer 2016-08-10T01:14:05.382620+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p98003692492P6GkGQxJP ENCSR000DSO https://www.encodeproject.org/experiments/ENCSR000DSO "histone,histone modification,narrow histone mark" H3K4me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF600ZXT https://www.encodeproject.org/files/ENCFF600ZXT/@@download/ENCFF600ZXT.bam ENCFF867LTN https://www.encodeproject.org/files/ENCFF867LTN/@@download/ENCFF867LTN.bam 22.9 M 0 20.7 M 0.904 SE 36 36 None 0.0 M 17.7 M 13.6 M 0.593 0.77 0.79 5.54 120 2.94 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/feec81cb-0ac5-48dd-9254-6914909df73a/@@download/cross_correlation_plot/ENCFF001EZV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB310NTI john-stamatoyannopoulos:DS14116-library ENCFF001EZV Illumina Genome Analyzer 2016-08-10T01:14:21.458075+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p9B80369F9k0ZBjk43fJ6 ENCSR000DSP https://www.encodeproject.org/experiments/ENCSR000DSP "histone,histone modification,narrow histone mark" H3K4me3-human cardiac mesoderm in vitro differentiated cells 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF292XQZ https://www.encodeproject.org/files/ENCFF292XQZ/@@download/ENCFF292XQZ.bam ENCFF086ELU https://www.encodeproject.org/files/ENCFF086ELU/@@download/ENCFF086ELU.bam 25.8 M 0 22.9 M 0.888 SE 36 36 None 0.0 M 20.4 M 12.8 M 0.495 0.63 0.74 4.92 140 2.27 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c172c43-0b5a-4536-a6cd-ce45384fe7be/@@download/cross_correlation_plot/ENCFF001EYX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB830TET john-stamatoyannopoulos:DS14121-library ENCFF001EYX Illumina Genome Analyzer 2016-08-10T01:13:57.997387+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBP0036962Q5vYZgxVQF9 ENCSR000DSP https://www.encodeproject.org/experiments/ENCSR000DSP "histone,histone modification,narrow histone mark" H3K4me3-human cardiac mesoderm in vitro differentiated cells 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF308ROU https://www.encodeproject.org/files/ENCFF308ROU/@@download/ENCFF308ROU.bam ENCFF106QTW https://www.encodeproject.org/files/ENCFF106QTW/@@download/ENCFF106QTW.bam 22.6 M 0 20.5 M 0.907 SE 36 36 None 0.0 M 17.7 M 14.8 M 0.657 0.84 0.89 11.53 155 1.91 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/543ae691-89c6-444b-9eb7-3ab94b6c3df2/@@download/cross_correlation_plot/ENCFF001EYY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB745OAO john-stamatoyannopoulos:DS14707-library ENCFF001EYY Illumina Genome Analyzer 2016-08-10T01:14:10.045238+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBV80369BJjV7XZgY1JbY ENCSR000DTJ https://www.encodeproject.org/experiments/ENCSR000DTJ control Control-human cardiac muscle cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF757OWU https://www.encodeproject.org/files/ENCFF757OWU/@@download/ENCFF757OWU.bam ENCFF293QZV https://www.encodeproject.org/files/ENCFF293QZV/@@download/ENCFF293QZV.bam 28.1 M 0 27.6 M 0.981 SE 36 36 native 0.0 M 21.0 M 20.8 M 0.741 0.99 1.00 212.60 90 1.01 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/6533c412-79e6-4c65-9d9c-9b9319dc71ee/@@download/cross_correlation_plot/ENCFF001HLJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB784CSU john-stamatoyannopoulos:DS15916-library ENCFF001HLJ Illumina Genome Analyzer 2016-08-09T16:02:35.253487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ958036927gfXkG2b30Fg ENCSR000DTI https://www.encodeproject.org/experiments/ENCSR000DTI "transcription factor,RNA binding protein" CTCF-human cardiac muscle cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF535MRQ https://www.encodeproject.org/files/ENCFF535MRQ/@@download/ENCFF535MRQ.bam ENCFF141FKQ https://www.encodeproject.org/files/ENCFF141FKQ/@@download/ENCFF141FKQ.bam 18.5 M 0 17.0 M 0.921 SE 36 36 native 0.0 M 13.6 M 11.6 M 0.626 0.85 0.85 6.57 165 2.07 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/1fcfc936-9f4f-4910-8c9e-fd9758353813/@@download/cross_correlation_plot/ENCFF001HKU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB979ZVE john-stamatoyannopoulos:DS18566-library ENCFF001HKU Illumina Genome Analyzer 2016-12-10T20:44:39.025081+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1630V80369BJyPz9fb9qXxG ENCSR000DTI https://www.encodeproject.org/experiments/ENCSR000DTI "transcription factor,RNA binding protein" CTCF-human cardiac muscle cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF396STC https://www.encodeproject.org/files/ENCFF396STC/@@download/ENCFF396STC.bam ENCFF279EZQ https://www.encodeproject.org/files/ENCFF279EZQ/@@download/ENCFF279EZQ.bam 26.4 M 0 19.9 M 0.755 SE 36 36 native 0.0 M 16.3 M 14.4 M 0.544 0.88 0.89 10.04 155 3.08 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/146dedab-2d18-4266-ac6d-c27a41dbfcc8/@@download/cross_correlation_plot/ENCFF001HKV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB094NFZ john-stamatoyannopoulos:DS18567-library ENCFF001HKV Illumina Genome Analyzer 2016-12-10T20:48:53.860739+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1630f803692f1gp513PxgFk ENCSR000DTK https://www.encodeproject.org/experiments/ENCSR000DTK "histone,histone modification,narrow histone mark" H3K4me3-human cardiac muscle cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF894BQI https://www.encodeproject.org/files/ENCFF894BQI/@@download/ENCFF894BQI.bam ENCFF497LWK https://www.encodeproject.org/files/ENCFF497LWK/@@download/ENCFF497LWK.bam 23.7 M 0 23.0 M 0.971 SE 36 36 None 0.0 M 20.7 M 15.2 M 0.643 0.74 0.76 4.49 115 3.68 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/696f848a-1a7b-4aea-995c-f5d6b024acfa/@@download/cross_correlation_plot/ENCFF001FHR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB898BWD john-stamatoyannopoulos:DS15755-library ENCFF001FHR Illumina Genome Analyzer 2016-08-10T01:15:57.234880+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p590036927J18bVvf18bK ENCSR000DTK https://www.encodeproject.org/experiments/ENCSR000DTK "histone,histone modification,narrow histone mark" H3K4me3-human cardiac muscle cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF912DWW https://www.encodeproject.org/files/ENCFF912DWW/@@download/ENCFF912DWW.bam ENCFF940YCP https://www.encodeproject.org/files/ENCFF940YCP/@@download/ENCFF940YCP.bam 28.0 M 0 26.9 M 0.964 SE 36 36 None 0.0 M 23.8 M 17.7 M 0.632 0.74 0.76 4.78 120 3.19 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ca855cf-3cdc-4249-9988-a5c9eef88369/@@download/cross_correlation_plot/ENCFF001FIA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB962OXK john-stamatoyannopoulos:DS15756-library ENCFF001FIA Illumina Genome Analyzer 2016-08-10T01:16:03.880489+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5F803697yXkpZbvqpJ0F ENCSR000DWK https://www.encodeproject.org/experiments/ENCSR000DWK control Control-human CD14-positive monocyte primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF262HFO https://www.encodeproject.org/files/ENCFF262HFO/@@download/ENCFF262HFO.bam ENCFF348UXF https://www.encodeproject.org/files/ENCFF348UXF/@@download/ENCFF348UXF.bam 20.1 M 0 18.3 M 0.908 SE 36 36 native 0.0 M 12.3 M 11.7 M 0.581 0.95 0.95 21.99 185 1.09 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/576a920d-5e91-422e-ada2-d3c229a679b2/@@download/cross_correlation_plot/ENCFF001HUV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB953MTC john-stamatoyannopoulos:DS18980-library ENCFF001HUV Illumina Genome Analyzer 2016-08-09T16:01:18.412550+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZBqQ0369J0Bzfkv2XyxQb ENCSR000DWM https://www.encodeproject.org/experiments/ENCSR000DWM "histone,histone modification,broad histone mark" H3K27me3-human CD14-positive monocyte primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF711ACC https://www.encodeproject.org/files/ENCFF711ACC/@@download/ENCFF711ACC.bam ENCFF164HWI https://www.encodeproject.org/files/ENCFF164HWI/@@download/ENCFF164HWI.bam 28.3 M 0 27.5 M 0.970 SE 36 36 native 0.0 M 21.6 M 21.3 M 0.753 0.99 0.99 70.10 155 1.04 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f1dd63b-bb35-4ffc-bdc6-53657d92baa2/@@download/cross_correlation_plot/ENCFF001FYR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB054NVR john-stamatoyannopoulos:DS19094-library ENCFF001FYR Illumina Genome Analyzer 2016-11-11T15:26:04.344520+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg38j0369K4JbVzZ5F3kpz ENCSR000DWL https://www.encodeproject.org/experiments/ENCSR000DWL "histone,histone modification,narrow histone mark" H3K4me3-human CD14-positive monocyte primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF764OBU https://www.encodeproject.org/files/ENCFF764OBU/@@download/ENCFF764OBU.bam ENCFF226IHP https://www.encodeproject.org/files/ENCFF226IHP/@@download/ENCFF226IHP.bam 24.2 M 0 23.3 M 0.964 SE 36 36 native 0.0 M 20.4 M 16.3 M 0.675 0.80 0.82 6.19 185 2.90 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/f592d2bb-b0ed-4ab1-b93f-d7ea0c0a6925/@@download/cross_correlation_plot/ENCFF001FYS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB222YOW john-stamatoyannopoulos:DS18981-library ENCFF001FYS Illumina Genome Analyzer 2016-08-20T00:47:11.064334+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZKf00369JjVqXgZ9JkyXf ENCSR000DTM https://www.encodeproject.org/experiments/ENCSR000DTM control Control-human choroid plexus epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF227BBG https://www.encodeproject.org/files/ENCFF227BBG/@@download/ENCFF227BBG.bam ENCFF667PKS https://www.encodeproject.org/files/ENCFF667PKS/@@download/ENCFF667PKS.bam 25.4 M 0 24.9 M 0.981 SE 36 36 native 0.0 M 19.0 M 18.9 M 0.743 0.99 1.00 220.54 95 1.01 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/07511212-f0f7-445f-81ac-506d9c274a4b/@@download/cross_correlation_plot/ENCFF001HLR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB384UJJ john-stamatoyannopoulos:DS15917-library ENCFF001HLR Illumina Genome Analyzer 2016-08-09T16:02:06.948465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ98003691jjxffj2bKqQq ENCSR000DTL https://www.encodeproject.org/experiments/ENCSR000DTL "transcription factor,RNA binding protein" CTCF-human choroid plexus epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF545GUP https://www.encodeproject.org/files/ENCFF545GUP/@@download/ENCFF545GUP.bam ENCFF129XMW https://www.encodeproject.org/files/ENCFF129XMW/@@download/ENCFF129XMW.bam 24.2 M 0 23.2 M 0.960 SE 36 36 native 0.0 M 19.4 M 14.2 M 0.586 0.73 0.80 6.79 120 5.10 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/e54619f7-a474-4a1e-a9b5-247f3ab62bd2/@@download/cross_correlation_plot/ENCFF001HLG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB109CTN john-stamatoyannopoulos:DS16051-library ENCFF001HLG Illumina Genome Analyzer II 2016-12-11T02:21:01.193982+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163jGj03690xXYVJ7Fj2f2j ENCSR000DTL https://www.encodeproject.org/experiments/ENCSR000DTL "transcription factor,RNA binding protein" CTCF-human choroid plexus epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF425AZR https://www.encodeproject.org/files/ENCFF425AZR/@@download/ENCFF425AZR.bam ENCFF897VRG https://www.encodeproject.org/files/ENCFF897VRG/@@download/ENCFF897VRG.bam 39.1 M 0 37.2 M 0.950 SE 36 36 native 0.0 M 28.8 M 24.0 M 0.612 0.83 0.85 7.50 110 2.15 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fe5f7bc-7751-4256-b42f-15bd67c652ec/@@download/cross_correlation_plot/ENCFF001HLI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB567SLB john-stamatoyannopoulos:DS16052-library ENCFF001HLI Illumina Genome Analyzer II 2016-12-11T02:36:03.408300+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163jX803695yqvv8q311QJp ENCSR000DTN https://www.encodeproject.org/experiments/ENCSR000DTN "histone,histone modification,narrow histone mark" H3K4me3-human choroid plexus epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF897OQJ https://www.encodeproject.org/files/ENCFF897OQJ/@@download/ENCFF897OQJ.bam ENCFF188DSY https://www.encodeproject.org/files/ENCFF188DSY/@@download/ENCFF188DSY.bam 25.1 M 0 24.2 M 0.961 SE 36 36 None 0.0 M 21.5 M 16.4 M 0.654 0.77 0.79 5.20 125 3.24 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/dfca4432-a57d-4108-9459-8f494d66c8ea/@@download/cross_correlation_plot/ENCFF001FIG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB829KAP john-stamatoyannopoulos:DS15758-library ENCFF001FIG Illumina Genome Analyzer 2016-08-10T01:12:54.303891+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pKQ803695XxB1K8gfxVVz ENCSR000DTN https://www.encodeproject.org/experiments/ENCSR000DTN "histone,histone modification,narrow histone mark" H3K4me3-human choroid plexus epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF366DPB https://www.encodeproject.org/files/ENCFF366DPB/@@download/ENCFF366DPB.bam ENCFF766QTD https://www.encodeproject.org/files/ENCFF766QTD/@@download/ENCFF766QTD.bam 30.3 M 0 29.0 M 0.958 SE 36 36 None 0.0 M 25.3 M 19.9 M 0.655 0.79 0.81 6.20 130 2.73 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2749d78-f6db-43e8-a829-d9169956dc12/@@download/cross_correlation_plot/ENCFF001FIN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB461ATD john-stamatoyannopoulos:DS15757-library ENCFF001FIN Illumina Genome Analyzer 2016-08-10T01:13:06.448362+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pKXQ03695XxB1K8gfxVX7 ENCSR000DVL https://www.encodeproject.org/experiments/ENCSR000DVL control Control-human endothelial cell of umbilical vein primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF265HDZ https://www.encodeproject.org/files/ENCFF265HDZ/@@download/ENCFF265HDZ.bam ENCFF745AMT https://www.encodeproject.org/files/ENCFF745AMT/@@download/ENCFF745AMT.bam 17.8 M 0 17.3 M 0.971 SE 36 36 native 0.0 M 12.5 M 12.2 M 0.687 0.98 0.98 57.68 90 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4862d63-0ea5-49c4-927a-1ea14fb11b5d/@@download/cross_correlation_plot/ENCFF001HSV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB084GLP john-stamatoyannopoulos:DS11470-library ENCFF001HSV Illumina Genome Analyzer 2016-08-09T16:01:28.818914+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZBJj03692zxj1pQ2ky8J4 ENCSR000DVP https://www.encodeproject.org/experiments/ENCSR000DVP "transcription factor,RNA binding protein" CTCF-human endothelial cell of umbilical vein primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF622IWH https://www.encodeproject.org/files/ENCFF622IWH/@@download/ENCFF622IWH.bam ENCFF289VFU https://www.encodeproject.org/files/ENCFF289VFU/@@download/ENCFF289VFU.bam 14.8 M 0 13.8 M 0.931 SE 36 36 native 0.0 M 11.4 M 5.8 M 0.395 0.51 0.50 1.90 110 8.18 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/04c1701c-65bb-462c-ab93-3466eb44ee3e/@@download/cross_correlation_plot/ENCFF001HSL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB400XDW john-stamatoyannopoulos:DS12395-library ENCFF001HSL Illumina Genome Analyzer II 2016-12-10T20:30:54.618622+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162kpj03697K4B1J71pxzYv ENCSR000DVP https://www.encodeproject.org/experiments/ENCSR000DVP "transcription factor,RNA binding protein" CTCF-human endothelial cell of umbilical vein primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF089UIV https://www.encodeproject.org/files/ENCFF089UIV/@@download/ENCFF089UIV.bam ENCFF845YSC https://www.encodeproject.org/files/ENCFF845YSC/@@download/ENCFF845YSC.bam 17.2 M 0 8.6 M 0.500 SE 36 36 native 0.0 M 6.9 M 4.3 M 0.249 0.62 0.60 2.28 125 6.97 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/71fc5448-0a30-4138-9eae-b591bd97f75f/@@download/cross_correlation_plot/ENCFF001HSN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB154UHE john-stamatoyannopoulos:DS11457-library ENCFF001HSN Illumina Genome Analyzer II 2016-12-10T20:27:59.908452+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162kzj03690xXYVJ7Fj2bxV ENCSR000DVO https://www.encodeproject.org/experiments/ENCSR000DVO "histone,histone modification,broad histone mark" H3K27me3-human endothelial cell of umbilical vein primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF897WVH https://www.encodeproject.org/files/ENCFF897WVH/@@download/ENCFF897WVH.bam ENCFF127GGY https://www.encodeproject.org/files/ENCFF127GGY/@@download/ENCFF127GGY.bam 18.1 M 0 17.2 M 0.952 SE 36 36 native 0.0 M 13.2 M 12.5 M 0.693 0.95 0.95 19.31 140 1.07 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/026dd954-b50f-45bc-b844-638c1df12397/@@download/cross_correlation_plot/ENCFF001FSE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB753MJY john-stamatoyannopoulos:DS12227-library ENCFF001FSE Illumina Genome Analyzer 2016-10-26T17:37:58.718679+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827380369PQyG3V5B44Q1p ENCSR000DVO https://www.encodeproject.org/experiments/ENCSR000DVO "histone,histone modification,broad histone mark" H3K27me3-human endothelial cell of umbilical vein primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF944GCZ https://www.encodeproject.org/files/ENCFF944GCZ/@@download/ENCFF944GCZ.bam ENCFF596MFS https://www.encodeproject.org/files/ENCFF596MFS/@@download/ENCFF596MFS.bam 16.4 M 0 15.9 M 0.969 SE 36 36 native 0.0 M 12.1 M 11.7 M 0.711 0.96 0.96 27.14 140 1.06 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c2839ca-0c01-429c-a61f-c6c322184d1c/@@download/cross_correlation_plot/ENCFF001FSF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB760BCY john-stamatoyannopoulos:DS12224-library ENCFF001FSF Illumina Genome Analyzer 2016-10-26T17:38:09.079404+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08277803697KPkyX9BPPq2k ENCSR000DVM https://www.encodeproject.org/experiments/ENCSR000DVM "histone,histone modification,broad histone mark" H3K36me3-human endothelial cell of umbilical vein primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF656HXW https://www.encodeproject.org/files/ENCFF656HXW/@@download/ENCFF656HXW.bam ENCFF009NSA https://www.encodeproject.org/files/ENCFF009NSA/@@download/ENCFF009NSA.bam 19.0 M 0 18.4 M 0.967 SE 36 36 native 0.0 M 13.5 M 12.9 M 0.676 0.95 0.95 19.67 140 1.08 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1e8dc23-10f5-4b2e-9d52-b8e687c00337/@@download/cross_correlation_plot/ENCFF001FSP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB417ISP john-stamatoyannopoulos:DS12228-library ENCFF001FSP Illumina Genome Analyzer 2016-10-26T17:41:19.243881+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082B7j0369F7fQjy59kFgzx ENCSR000DVM https://www.encodeproject.org/experiments/ENCSR000DVM "histone,histone modification,broad histone mark" H3K36me3-human endothelial cell of umbilical vein primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF523DSW https://www.encodeproject.org/files/ENCFF523DSW/@@download/ENCFF523DSW.bam ENCFF646FCP https://www.encodeproject.org/files/ENCFF646FCP/@@download/ENCFF646FCP.bam 19.4 M 0 18.8 M 0.971 SE 36 36 native 0.0 M 13.8 M 13.2 M 0.682 0.96 0.96 22.90 125 1.08 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/e366379e-04ad-494d-b840-165ddc579080/@@download/cross_correlation_plot/ENCFF001FSO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB928IOX john-stamatoyannopoulos:DS12225-library ENCFF001FSO Illumina Genome Analyzer 2016-10-26T17:39:22.898217+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082BKQ0369FFbbzvx9jvvvB ENCSR000DVN https://www.encodeproject.org/experiments/ENCSR000DVN "histone,histone modification,narrow histone mark" H3K4me3-human endothelial cell of umbilical vein primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF841TST https://www.encodeproject.org/files/ENCFF841TST/@@download/ENCFF841TST.bam ENCFF044MWV https://www.encodeproject.org/files/ENCFF044MWV/@@download/ENCFF044MWV.bam 25.3 M 0 22.1 M 0.875 SE 36 36 None 0.0 M 18.7 M 15.5 M 0.614 0.83 0.84 7.07 160 3.19 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/426658c7-002e-4528-9bd1-2781b6cf12d8/@@download/cross_correlation_plot/ENCFF001FSV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB471UFQ john-stamatoyannopoulos:DS11460-library ENCFF001FSV Illumina Genome Analyzer 2016-08-10T01:12:51.239449+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJgQ0369BjkVxP0gkkqY8 ENCSR000DVN https://www.encodeproject.org/experiments/ENCSR000DVN "histone,histone modification,narrow histone mark" H3K4me3-human endothelial cell of umbilical vein primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF288CHB https://www.encodeproject.org/files/ENCFF288CHB/@@download/ENCFF288CHB.bam ENCFF166CXH https://www.encodeproject.org/files/ENCFF166CXH/@@download/ENCFF166CXH.bam 16.5 M 0 14.1 M 0.854 SE 36 36 None 0.0 M 11.9 M 10.7 M 0.651 0.90 0.91 11.16 160 3.11 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/06e93a4d-4495-4f9a-9758-5b1cfe0b6741/@@download/cross_correlation_plot/ENCFF001FSU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB966VDE john-stamatoyannopoulos:DS11458-library ENCFF001FSU Illumina Genome Analyzer 2016-08-10T01:12:33.640258+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJkQ03695XxB1K8gfxVV6 ENCSR000DTS https://www.encodeproject.org/experiments/ENCSR000DTS control Control-human epithelial cell of esophagus primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF255XVF https://www.encodeproject.org/files/ENCFF255XVF/@@download/ENCFF255XVF.bam ENCFF008DOI https://www.encodeproject.org/files/ENCFF008DOI/@@download/ENCFF008DOI.bam 16.7 M 0 15.4 M 0.924 SE 36 36 native 0.0 M 11.0 M 11.0 M 0.660 1.00 1.00 389.43 55 1.01 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/19cd7288-42db-48c0-b413-5d2fb2524235/@@download/cross_correlation_plot/ENCFF001HMS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB215YRD john-stamatoyannopoulos:DS16057-library ENCFF001HMS Illumina Genome Analyzer 2016-08-09T16:02:11.076151+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9J803696GPBjjv2bkV0J ENCSR000DTR https://www.encodeproject.org/experiments/ENCSR000DTR "transcription factor,RNA binding protein" CTCF-human epithelial cell of esophagus primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF388UNJ https://www.encodeproject.org/files/ENCFF388UNJ/@@download/ENCFF388UNJ.bam ENCFF252VQJ https://www.encodeproject.org/files/ENCFF252VQJ/@@download/ENCFF252VQJ.bam 28.0 M 0 27.3 M 0.973 SE 36 36 native 0.0 M 21.3 M 18.4 M 0.657 0.87 0.88 9.86 110 2.39 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/b974fa28-121c-44e5-aa11-9592c2c81692/@@download/cross_correlation_plot/ENCFF001HMK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB533PZJ john-stamatoyannopoulos:DS16059-library ENCFF001HMK Illumina Genome Analyzer II 2016-12-11T03:57:17.176129+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164xX80369BgG8x1ygv1X8P ENCSR000DTR https://www.encodeproject.org/experiments/ENCSR000DTR "transcription factor,RNA binding protein" CTCF-human epithelial cell of esophagus primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF552FJB https://www.encodeproject.org/files/ENCFF552FJB/@@download/ENCFF552FJB.bam ENCFF098LNJ https://www.encodeproject.org/files/ENCFF098LNJ/@@download/ENCFF098LNJ.bam 13.8 M 0 12.8 M 0.926 SE 36 36 native 0.0 M 9.4 M 8.7 M 0.630 0.93 0.93 14.63 125 2.35 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3475075-566a-4b09-9cce-a8441574d93c/@@download/cross_correlation_plot/ENCFF001HMI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB619RPL john-stamatoyannopoulos:DS16058-library ENCFF001HMI Illumina Genome Analyzer II 2016-12-11T03:46:29.043852+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164xfj0369PvYp91zK1PxJk ENCSR000DTT https://www.encodeproject.org/experiments/ENCSR000DTT "histone,histone modification,narrow histone mark" H3K4me3-human epithelial cell of esophagus primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF775VRN https://www.encodeproject.org/files/ENCFF775VRN/@@download/ENCFF775VRN.bam ENCFF043UPP https://www.encodeproject.org/files/ENCFF043UPP/@@download/ENCFF043UPP.bam 34.0 M 0 33.5 M 0.984 SE 36 36 None 0.0 M 28.7 M 23.1 M 0.679 0.81 0.83 6.42 160 2.18 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/7cbd305d-7272-493e-80b1-91b8774ecdae/@@download/cross_correlation_plot/ENCFF001FJM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB717OJC john-stamatoyannopoulos:DS16060-library ENCFF001FJM Illumina Genome Analyzer 2016-08-10T01:13:46.405284+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pK180369BJjV7XZgY1Jgz ENCSR000DTT https://www.encodeproject.org/experiments/ENCSR000DTT "histone,histone modification,narrow histone mark" H3K4me3-human epithelial cell of esophagus primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF552QGG https://www.encodeproject.org/files/ENCFF552QGG/@@download/ENCFF552QGG.bam ENCFF449XPZ https://www.encodeproject.org/files/ENCFF449XPZ/@@download/ENCFF449XPZ.bam 35.5 M 0 35.0 M 0.986 SE 36 36 None 0.0 M 30.0 M 24.4 M 0.685 0.81 0.83 6.73 145 2.10 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/048d37ec-de35-421d-bf63-7ced48cd472e/@@download/cross_correlation_plot/ENCFF001FJL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB557EVF john-stamatoyannopoulos:DS16061-library ENCFF001FJL Illumina Genome Analyzer 2016-08-10T01:13:19.817084+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pK380369BJjV7XZgY1Jj7 ENCSR000DXE https://www.encodeproject.org/experiments/ENCSR000DXE control Control-human epithelial cell of proximal tubule primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF870RFE https://www.encodeproject.org/files/ENCFF870RFE/@@download/ENCFF870RFE.bam ENCFF671FKH https://www.encodeproject.org/files/ENCFF671FKH/@@download/ENCFF671FKH.bam 36.9 M 0 36.5 M 0.989 SE 36 36 native 0.0 M 28.2 M 27.8 M 0.753 0.99 0.99 104.34 55 1.01 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/05ad5917-4481-4654-adce-8cf9fece373d/@@download/cross_correlation_plot/ENCFF001HWY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB463TAD john-stamatoyannopoulos:DS18336-library ENCFF001HWY Illumina Genome Analyzer 2016-08-09T16:02:05.842340+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZFF003696GPBjjv2bkV1X ENCSR000DXD https://www.encodeproject.org/experiments/ENCSR000DXD "transcription factor,RNA binding protein" CTCF-human epithelial cell of proximal tubule primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF693QLZ https://www.encodeproject.org/files/ENCFF693QLZ/@@download/ENCFF693QLZ.bam ENCFF454UUJ https://www.encodeproject.org/files/ENCFF454UUJ/@@download/ENCFF454UUJ.bam 27.9 M 0 24.0 M 0.861 SE 36 36 native 0.0 M 19.1 M 15.8 M 0.568 0.83 0.85 7.15 140 3.22 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/50f83e6c-6137-480e-879c-b1fe93ac30a4/@@download/cross_correlation_plot/ENCFF001HWL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB422LJT john-stamatoyannopoulos:DS18338-library ENCFF001HWL Illumina Genome Analyzer 2016-12-11T02:57:56.420085+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1645z80369Bxb30J6x5bZFZ ENCSR000DXD https://www.encodeproject.org/experiments/ENCSR000DXD "transcription factor,RNA binding protein" CTCF-human epithelial cell of proximal tubule primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF033MWR https://www.encodeproject.org/files/ENCFF033MWR/@@download/ENCFF033MWR.bam ENCFF537QBS https://www.encodeproject.org/files/ENCFF537QBS/@@download/ENCFF537QBS.bam 23.6 M 0 20.5 M 0.871 SE 36 36 native 0.0 M 16.6 M 14.1 M 0.597 0.85 0.85 6.79 145 2.43 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/b647643c-f6fe-4241-867d-a922f0749997/@@download/cross_correlation_plot/ENCFF001HWU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB662ZQJ john-stamatoyannopoulos:DS18337-library ENCFF001HWU Illumina Genome Analyzer 2016-12-11T02:56:00.240151+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16463j0369KQ3Yk1yz1kgPY ENCSR000DXF https://www.encodeproject.org/experiments/ENCSR000DXF "histone,histone modification,narrow histone mark" H3K4me3-human epithelial cell of proximal tubule primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF929GPO https://www.encodeproject.org/files/ENCFF929GPO/@@download/ENCFF929GPO.bam ENCFF563NFA https://www.encodeproject.org/files/ENCFF563NFA/@@download/ENCFF563NFA.bam 23.7 M 0 22.7 M 0.956 SE 36 36 None 0.0 M 20.0 M 16.5 M 0.697 0.83 0.83 6.39 170 2.45 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e26bfbc-9c3b-499e-bb06-2031624d9ab1/@@download/cross_correlation_plot/ENCFF001GCC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB587QPT john-stamatoyannopoulos:DS18340-library ENCFF001GCC Illumina Genome Analyzer 2016-08-10T01:12:50.679479+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pKF80369561xqZQgj50vJ ENCSR000DXF https://www.encodeproject.org/experiments/ENCSR000DXF "histone,histone modification,narrow histone mark" H3K4me3-human epithelial cell of proximal tubule primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF230PGN https://www.encodeproject.org/files/ENCFF230PGN/@@download/ENCFF230PGN.bam ENCFF666OIH https://www.encodeproject.org/files/ENCFF666OIH/@@download/ENCFF666OIH.bam 24.0 M 0 23.4 M 0.976 SE 36 36 None 0.0 M 20.5 M 17.2 M 0.717 0.84 0.85 7.05 180 2.27 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/42738545-7079-4ea9-921d-db283544b4f6/@@download/cross_correlation_plot/ENCFF001GCF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB983PUC john-stamatoyannopoulos:DS18339-library ENCFF001GCF Illumina Genome Analyzer 2016-08-10T01:12:57.583725+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pKJ80369561xqZQgj50vf ENCSR000DPT https://www.encodeproject.org/experiments/ENCSR000DPT control Control-human fibroblast of gingiva primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF073RIN https://www.encodeproject.org/files/ENCFF073RIN/@@download/ENCFF073RIN.bam ENCFF942JSC https://www.encodeproject.org/files/ENCFF942JSC/@@download/ENCFF942JSC.bam 28.1 M 0 27.5 M 0.977 SE 36 36 native 0.0 M 21.3 M 21.1 M 0.751 0.99 0.99 162.69 55 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/d97765b0-ed9d-4029-a14d-0084f42e2714/@@download/cross_correlation_plot/ENCFF001GXZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB272QDP john-stamatoyannopoulos:DS15910-library ENCFF001GXZ Illumina Genome Analyzer 2016-08-09T16:03:03.521627+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7F00369F97Byg82v2pqz ENCSR000DPS https://www.encodeproject.org/experiments/ENCSR000DPS "transcription factor,RNA binding protein" CTCF-human fibroblast of gingiva primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF278LWC https://www.encodeproject.org/files/ENCFF278LWC/@@download/ENCFF278LWC.bam ENCFF663QUY https://www.encodeproject.org/files/ENCFF663QUY/@@download/ENCFF663QUY.bam 27.0 M 0 25.7 M 0.950 SE 36 36 native 0.0 M 21.0 M 16.3 M 0.605 0.78 0.80 5.39 105 3.23 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6980a51-8a5c-4d20-930c-cfbc1469a50e/@@download/cross_correlation_plot/ENCFF001GXV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB862OVI john-stamatoyannopoulos:DS16035-library ENCFF001GXV Illumina Genome Analyzer II 2016-12-10T20:50:25.202567+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162q7003697K4B1J71pxzZK ENCSR000DPS https://www.encodeproject.org/experiments/ENCSR000DPS "transcription factor,RNA binding protein" CTCF-human fibroblast of gingiva primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF692VVV https://www.encodeproject.org/files/ENCFF692VVV/@@download/ENCFF692VVV.bam ENCFF153KKT https://www.encodeproject.org/files/ENCFF153KKT/@@download/ENCFF153KKT.bam 30.4 M 0 29.6 M 0.975 SE 36 36 native 0.0 M 24.0 M 20.4 M 0.672 0.85 0.87 8.54 105 2.23 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a3c83d6-4746-46ca-9532-b5caccf0ae5e/@@download/cross_correlation_plot/ENCFF001GXW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB899YWA john-stamatoyannopoulos:DS16036-library ENCFF001GXW Illumina Genome Analyzer II 2016-12-10T21:00:40.023514+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162qG803697k5jKB6pJ7qj5 ENCSR000DPU https://www.encodeproject.org/experiments/ENCSR000DPU "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of gingiva primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF186DFP https://www.encodeproject.org/files/ENCFF186DFP/@@download/ENCFF186DFP.bam ENCFF305STT https://www.encodeproject.org/files/ENCFF305STT/@@download/ENCFF305STT.bam 31.0 M 0 30.1 M 0.970 SE 36 36 None 0.0 M 26.7 M 20.3 M 0.655 0.76 0.78 4.96 125 2.52 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/e853e827-bbe2-44c7-9e99-828201851413/@@download/cross_correlation_plot/ENCFF001EPF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB796EJJ john-stamatoyannopoulos:DS15742-library ENCFF001EPF Illumina Genome Analyzer 2016-08-10T01:15:11.029362+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p93Q03692ZV2Y8jk0GZ1x ENCSR000DPU https://www.encodeproject.org/experiments/ENCSR000DPU "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of gingiva primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF705XZM https://www.encodeproject.org/files/ENCFF705XZM/@@download/ENCFF705XZM.bam ENCFF601GIY https://www.encodeproject.org/files/ENCFF601GIY/@@download/ENCFF601GIY.bam 23.0 M 0 22.2 M 0.965 SE 36 36 None 0.0 M 19.8 M 15.8 M 0.684 0.80 0.81 5.73 125 2.83 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/70e3d608-e074-49de-9cf3-8624dfcc5bd8/@@download/cross_correlation_plot/ENCFF001EPE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB420JSO john-stamatoyannopoulos:DS15743-library ENCFF001EPE Illumina Genome Analyzer 2016-08-10T01:14:08.688265+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p95Q03692ZV2Y8jk0GZ25 ENCSR000DPN https://www.encodeproject.org/experiments/ENCSR000DPN control Control-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF732CPP https://www.encodeproject.org/files/ENCFF732CPP/@@download/ENCFF732CPP.bam ENCFF602KDF https://www.encodeproject.org/files/ENCFF602KDF/@@download/ENCFF602KDF.bam 22.5 M 0 21.7 M 0.965 SE 36 36 None 0.0 M 16.6 M 16.5 M 0.735 0.99 1.00 216.83 95 1.01 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/482da7f9-87d4-42b4-9015-1bf2163ceb45/@@download/cross_correlation_plot/ENCFF001GXE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB470VXP john-stamatoyannopoulos:DS15909-library ENCFF001GXE Illumina Genome Analyzer 2016-07-13T02:52:48.057149+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4Zj0369Gfkv729B9ZPK3 ENCSR000DVB https://www.encodeproject.org/experiments/ENCSR000DVB control Control-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF741CYK https://www.encodeproject.org/files/ENCFF741CYK/@@download/ENCFF741CYK.bam ENCFF067VME https://www.encodeproject.org/files/ENCFF067VME/@@download/ENCFF067VME.bam 22.7 M 0 22.3 M 0.983 SE 36 36 native 0.0 M 16.9 M 16.8 M 0.741 1.00 1.00 280.80 95 1.01 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d6dca3a-f20a-43d3-90bb-69e1b23a8d51/@@download/cross_correlation_plot/ENCFF001HRI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB326SPB john-stamatoyannopoulos:DS16180-library ENCFF001HRI Illumina Genome Analyzer 2016-08-09T16:01:44.055955+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZB6003691jjxffj2bKqVV ENCSR000DXA https://www.encodeproject.org/experiments/ENCSR000DXA control Control-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF662VGC https://www.encodeproject.org/files/ENCFF662VGC/@@download/ENCFF662VGC.bam ENCFF598VBU https://www.encodeproject.org/files/ENCFF598VBU/@@download/ENCFF598VBU.bam 44.3 M 0 43.9 M 0.990 SE 36 36 native 0.0 M 34.4 M 33.3 M 0.752 0.97 0.97 34.63 135 1.01 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/3827950a-a5c6-47f3-a2f0-a3241c9c08fd/@@download/cross_correlation_plot/ENCFF001HWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB075BAX john-stamatoyannopoulos:DS16347-library ENCFF001HWK Illumina Genome Analyzer 2016-08-09T16:02:41.739003+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZF5j0369G0925gv2xQP21 ENCSR000DPM https://www.encodeproject.org/experiments/ENCSR000DPM "transcription factor,RNA binding protein" CTCF-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF402WKZ https://www.encodeproject.org/files/ENCFF402WKZ/@@download/ENCFF402WKZ.bam ENCFF005GES https://www.encodeproject.org/files/ENCFF005GES/@@download/ENCFF005GES.bam 25.3 M 0 24.7 M 0.976 SE 36 36 native 0.0 M 19.7 M 17.6 M 0.695 0.89 0.90 11.21 105 2.08 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0a9b703-1165-4f55-81fa-1ffc84dd2692/@@download/cross_correlation_plot/ENCFF001GWW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB746XGY john-stamatoyannopoulos:DS16029-library ENCFF001GWW Illumina Genome Analyzer II 2016-12-11T04:32:12.389015+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165f3Q0369KQ3Yk1yz1kgpq ENCSR000DPM https://www.encodeproject.org/experiments/ENCSR000DPM "transcription factor,RNA binding protein" CTCF-human fibroblast of lung primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF811FBC https://www.encodeproject.org/files/ENCFF811FBC/@@download/ENCFF811FBC.bam ENCFF684AWI https://www.encodeproject.org/files/ENCFF684AWI/@@download/ENCFF684AWI.bam 24.2 M 0 20.5 M 0.849 SE 36 36 native 0.0 M 16.5 M 15.2 M 0.631 0.92 0.93 14.91 145 2.22 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/1124393f-0248-4571-82f6-9a417c57cf97/@@download/cross_correlation_plot/ENCFF001GWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB978XJK john-stamatoyannopoulos:DS18603-library ENCFF001GWV Illumina Genome Analyzer II 2016-12-11T04:30:22.901191+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165f8Q0369BJyPz9fb9qYJ0 ENCSR000DVA https://www.encodeproject.org/experiments/ENCSR000DVA "transcription factor,RNA binding protein" CTCF-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF327QNZ https://www.encodeproject.org/files/ENCFF327QNZ/@@download/ENCFF327QNZ.bam ENCFF999VRD https://www.encodeproject.org/files/ENCFF999VRD/@@download/ENCFF999VRD.bam 25.5 M 0 24.7 M 0.966 SE 36 36 native 0.0 M 19.4 M 17.5 M 0.688 0.90 0.92 13.93 110 2.17 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/7213e02a-9099-4433-9326-d9058dcce996/@@download/cross_correlation_plot/ENCFF001HRA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB977MXL john-stamatoyannopoulos:DS16181-library ENCFF001HRA Illumina Genome Analyzer II 2016-12-11T03:56:05.232283+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164pz003697yz601ypVJ3Px ENCSR000DVA https://www.encodeproject.org/experiments/ENCSR000DVA "transcription factor,RNA binding protein" CTCF-human fibroblast of lung primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF696UMD https://www.encodeproject.org/files/ENCFF696UMD/@@download/ENCFF696UMD.bam ENCFF583TGU https://www.encodeproject.org/files/ENCFF583TGU/@@download/ENCFF583TGU.bam 29.6 M 0 28.8 M 0.972 SE 36 36 native 0.0 M 22.3 M 20.9 M 0.707 0.94 0.95 21.06 110 1.68 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/7316ad03-17d8-4676-9c5b-86e9e15df7d0/@@download/cross_correlation_plot/ENCFF001HQZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB851JWD john-stamatoyannopoulos:DS16182-library ENCFF001HQZ Illumina Genome Analyzer II 2016-12-11T03:57:00.789705+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164q3Q0369BgG8x1ygv1X7V ENCSR000DWY https://www.encodeproject.org/experiments/ENCSR000DWY "transcription factor,RNA binding protein" CTCF-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF758ZNV https://www.encodeproject.org/files/ENCFF758ZNV/@@download/ENCFF758ZNV.bam ENCFF724FGD https://www.encodeproject.org/files/ENCFF724FGD/@@download/ENCFF724FGD.bam 32.7 M 0 29.7 M 0.908 SE 36 36 native 0.0 M 22.7 M 19.9 M 0.608 0.88 0.88 8.29 135 1.56 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf7c09b9-c13c-41d2-ad4a-4c9deb4e891e/@@download/cross_correlation_plot/ENCFF001HWA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB752ZEB john-stamatoyannopoulos:DS16349-library ENCFF001HWA Illumina Genome Analyzer 2017-04-09T03:43:20.952309+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkBFQ036954677B697gXY1 ENCSR000DPL https://www.encodeproject.org/experiments/ENCSR000DPL "histone,histone modification,narrow histone mark" H3K27ac-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF618ZNM https://www.encodeproject.org/files/ENCFF618ZNM/@@download/ENCFF618ZNM.bam ENCFF755VCN https://www.encodeproject.org/files/ENCFF755VCN/@@download/ENCFF755VCN.bam 22.1 M 0 17.8 M 0.805 SE 36 None 0.0 M 12.7 M 12.1 M 0.549 0.96 0.96 26.44 160 1.47 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/4891a971-50f3-4270-b8b2-9c6f432aad2d/@@download/cross_correlation_plot/ENCFF001ENE-ENCFF001END_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB865SZN john-stamatoyannopoulos:DS21479-library "ENCFF001END,ENCFF001ENE" Illumina Genome Analyzer 2016-07-13T02:52:45.433570+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4Pj0369Gfkv729B9ZPJY ENCSR000DPK https://www.encodeproject.org/experiments/ENCSR000DPK "histone,histone modification,broad histone mark" H3K27me3-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF854DNJ https://www.encodeproject.org/files/ENCFF854DNJ/@@download/ENCFF854DNJ.bam ENCFF540WAJ https://www.encodeproject.org/files/ENCFF540WAJ/@@download/ENCFF540WAJ.bam 20.8 M 0 16.5 M 0.795 SE 36 36 native 0.0 M 11.8 M 11.6 M 0.561 0.98 0.98 63.02 160 1.03 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/0df9b75d-f54f-4434-90a8-afb54a4a0278/@@download/cross_correlation_plot/ENCFF001ENL-ENCFF001ENK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB864IMR john-stamatoyannopoulos:DS21480-library "ENCFF001ENL,ENCFF001ENK" Illumina Genome Analyzer 2016-11-11T15:29:26.337325+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfpB00369BV37kpGJfBKFF ENCSR000DPO https://www.encodeproject.org/experiments/ENCSR000DPO "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF725TDK https://www.encodeproject.org/files/ENCFF725TDK/@@download/ENCFF725TDK.bam ENCFF160GRT https://www.encodeproject.org/files/ENCFF160GRT/@@download/ENCFF160GRT.bam 29.6 M 0 28.2 M 0.953 SE 36 36 None 0.0 M 24.2 M 19.3 M 0.653 0.80 0.82 6.35 115 2.29 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef6bda3a-6027-4795-bb72-01a1bbb5de8e/@@download/cross_correlation_plot/ENCFF001EOH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB328XAX john-stamatoyannopoulos:DS15740-library ENCFF001EOH Illumina Genome Analyzer 2016-08-10T01:12:57.650824+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pKbj0369BJjV7XZgY1Jjb ENCSR000DPO https://www.encodeproject.org/experiments/ENCSR000DPO "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF656QTI https://www.encodeproject.org/files/ENCFF656QTI/@@download/ENCFF656QTI.bam ENCFF043MGA https://www.encodeproject.org/files/ENCFF043MGA/@@download/ENCFF043MGA.bam 28.6 M 0 27.4 M 0.957 SE 36 36 None 0.0 M 23.6 M 19.0 M 0.666 0.81 0.83 6.43 120 2.57 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/19c89f08-4401-4c67-b675-54c186aed481/@@download/cross_correlation_plot/ENCFF001EOF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB510QUS john-stamatoyannopoulos:DS15741-library ENCFF001EOF Illumina Genome Analyzer 2016-08-10T01:12:49.903148+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pKj80369BjkVxP0gkkqYk ENCSR000DVC https://www.encodeproject.org/experiments/ENCSR000DVC "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF834GNU https://www.encodeproject.org/files/ENCFF834GNU/@@download/ENCFF834GNU.bam ENCFF206RLI https://www.encodeproject.org/files/ENCFF206RLI/@@download/ENCFF206RLI.bam 26.7 M 0 25.3 M 0.946 SE 36 36 None 0.0 M 21.3 M 17.3 M 0.648 0.81 0.83 6.89 140 2.12 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/8af6cacc-ed4b-4c9a-839e-a85a8cf887cb/@@download/cross_correlation_plot/ENCFF001FQA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB967NCB john-stamatoyannopoulos:DS16184-library ENCFF001FQA Illumina Genome Analyzer 2016-08-10T01:16:14.134107+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6180369BJvqxV5vxVX29 ENCSR000DVC https://www.encodeproject.org/experiments/ENCSR000DVC "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF727DER https://www.encodeproject.org/files/ENCFF727DER/@@download/ENCFF727DER.bam ENCFF594QRY https://www.encodeproject.org/files/ENCFF594QRY/@@download/ENCFF594QRY.bam 23.2 M 0 21.2 M 0.915 SE 36 36 None 0.0 M 17.6 M 14.6 M 0.630 0.83 0.85 7.89 130 2.06 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/40be195a-19e7-4efa-9dcf-584652df6a56/@@download/cross_correlation_plot/ENCFF001FPZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB459QGX john-stamatoyannopoulos:DS16183-library ENCFF001FPZ Illumina Genome Analyzer 2016-08-10T01:15:59.402661+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p63j036927J18bVvf18fJ ENCSR000DWZ https://www.encodeproject.org/experiments/ENCSR000DWZ "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF770EIL https://www.encodeproject.org/files/ENCFF770EIL/@@download/ENCFF770EIL.bam ENCFF573AWY https://www.encodeproject.org/files/ENCFF573AWY/@@download/ENCFF573AWY.bam 20.2 M 0 19.8 M 0.981 SE 36 36 None 0.0 M 17.6 M 15.2 M 0.753 0.87 0.87 8.07 180 2.19 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b745d0b-2082-45d8-935d-db0d17afd989/@@download/cross_correlation_plot/ENCFF001GBC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB229IZF john-stamatoyannopoulos:DS16351-library ENCFF001GBC Illumina Genome Analyzer 2016-08-10T01:12:56.090637+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pGgQ036962Q5vYZgxVQJ3 ENCSR000DWZ https://www.encodeproject.org/experiments/ENCSR000DWZ "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of lung primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF239TNL https://www.encodeproject.org/files/ENCFF239TNL/@@download/ENCFF239TNL.bam ENCFF416KLO https://www.encodeproject.org/files/ENCFF416KLO/@@download/ENCFF416KLO.bam 26.2 M 0 25.9 M 0.987 SE 36 36 None 0.0 M 22.4 M 19.2 M 0.732 0.86 0.87 7.84 185 1.85 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/3bb95cd5-82aa-4831-8cea-7ab8d0754270/@@download/cross_correlation_plot/ENCFF001GBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB413QOH john-stamatoyannopoulos:DS16350-library ENCFF001GBF Illumina Genome Analyzer 2016-08-10T01:13:19.371277+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pGpQ0369BjkVxP0gkkqX3 ENCSR000DPJ https://www.encodeproject.org/experiments/ENCSR000DPJ "histone,histone modification,broad histone mark" H3K9me3-human fibroblast of lung primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF333FHR https://www.encodeproject.org/files/ENCFF333FHR/@@download/ENCFF333FHR.bam ENCFF463WCK https://www.encodeproject.org/files/ENCFF463WCK/@@download/ENCFF463WCK.bam 35.4 M 0 19.9 M 0.562 SE 36 36 native 0.0 M 8.3 M 7.7 M 0.217 0.93 0.93 14.06 190 1.29 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/c200c554-a1ee-4983-beef-49a862caf036/@@download/cross_correlation_plot/ENCFF001EMU-ENCFF001EMV-ENCFF001EMT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB801AHE john-stamatoyannopoulos:DS21482-library "ENCFF001EMT,ENCFF001EMU,ENCFF001EMV" Illumina Genome Analyzer 2016-10-26T17:43:36.052610+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0824F80369GJ6xQfbB7Bk78 ENCSR000DPJ https://www.encodeproject.org/experiments/ENCSR000DPJ "histone,histone modification,broad histone mark" H3K9me3-human fibroblast of lung primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF441XPX https://www.encodeproject.org/files/ENCFF441XPX/@@download/ENCFF441XPX.bam ENCFF462PEI https://www.encodeproject.org/files/ENCFF462PEI/@@download/ENCFF462PEI.bam 29.5 M 0 24.9 M 0.843 SE 36 36 native 0.0 M 13.8 M 13.3 M 0.452 0.97 0.97 29.19 190 1.11 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/fbbe8678-af9b-4e5a-b4ac-8a7022a90a9d/@@download/cross_correlation_plot/ENCFF001EMX-ENCFF001EMW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB748GIP john-stamatoyannopoulos:DS21481-library "ENCFF001EMW,ENCFF001EMX" Illumina Genome Analyzer 2016-10-26T17:39:23.312982+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0824X00369BX1xqb1B808Bf ENCSR000DUV https://www.encodeproject.org/experiments/ENCSR000DUV control Control-human fibroblast of mammary gland primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF272GNJ https://www.encodeproject.org/files/ENCFF272GNJ/@@download/ENCFF272GNJ.bam ENCFF712TPV https://www.encodeproject.org/files/ENCFF712TPV/@@download/ENCFF712TPV.bam 11.6 M 0 10.3 M 0.891 SE 36 36 native 0.0 M 6.8 M 6.8 M 0.589 1.00 1.00 729.63 50 1.02 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c10c5bb-9b42-41a7-a94e-d035a2472613/@@download/cross_correlation_plot/ENCFF001HQI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB260RHR john-stamatoyannopoulos:DS16174-library ENCFF001HQI Illumina Genome Analyzer 2016-08-09T16:02:19.750557+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZB100369F97Byg82v2py4 ENCSR000DUU https://www.encodeproject.org/experiments/ENCSR000DUU "transcription factor,RNA binding protein" CTCF-human fibroblast of mammary gland primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF149SVY https://www.encodeproject.org/files/ENCFF149SVY/@@download/ENCFF149SVY.bam ENCFF479TDX https://www.encodeproject.org/files/ENCFF479TDX/@@download/ENCFF479TDX.bam 11.7 M 0 11.1 M 0.945 SE 36 36 native 0.0 M 8.7 M 8.1 M 0.693 0.93 0.94 17.39 115 3.82 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/efa95ee1-ec23-4bf7-a91d-15772ade32c6/@@download/cross_correlation_plot/ENCFF001HPY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB027LHT john-stamatoyannopoulos:DS16176-library ENCFF001HPY Illumina Genome Analyzer II 2016-12-10T20:35:13.007961+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1631v803692pJ09J76g5fqG ENCSR000DUU https://www.encodeproject.org/experiments/ENCSR000DUU "transcription factor,RNA binding protein" CTCF-human fibroblast of mammary gland primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF161AGR https://www.encodeproject.org/files/ENCFF161AGR/@@download/ENCFF161AGR.bam ENCFF792BVP https://www.encodeproject.org/files/ENCFF792BVP/@@download/ENCFF792BVP.bam 26.0 M 0 24.7 M 0.949 SE 36 36 native 0.0 M 19.2 M 17.0 M 0.651 0.88 0.90 12.37 105 2.86 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8838c9b-72c3-4947-8c1a-97522e359451/@@download/cross_correlation_plot/ENCFF001HPZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB906ZLW john-stamatoyannopoulos:DS16175-library ENCFF001HPZ Illumina Genome Analyzer II 2016-12-10T20:54:08.359511+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16321003697K4B1J71pxzfQ ENCSR000DUW https://www.encodeproject.org/experiments/ENCSR000DUW "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of mammary gland primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF202JKL https://www.encodeproject.org/files/ENCFF202JKL/@@download/ENCFF202JKL.bam ENCFF767VBU https://www.encodeproject.org/files/ENCFF767VBU/@@download/ENCFF767VBU.bam 30.9 M 0 30.1 M 0.974 SE 36 36 None 0.0 M 25.9 M 20.6 M 0.666 0.80 0.81 5.96 145 2.22 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/f10f8222-0e8e-4d87-938f-b7e19f4ccb82/@@download/cross_correlation_plot/ENCFF001FPA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB709YFO john-stamatoyannopoulos:DS16151-library ENCFF001FPA Illumina Genome Analyzer 2016-08-10T01:15:20.308250+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p8BQ03692ZV2Y8jk0GZ0g ENCSR000DUW https://www.encodeproject.org/experiments/ENCSR000DUW "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of mammary gland primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF494KJK https://www.encodeproject.org/files/ENCFF494KJK/@@download/ENCFF494KJK.bam ENCFF839KKA https://www.encodeproject.org/files/ENCFF839KKA/@@download/ENCFF839KKA.bam 27.5 M 0 26.8 M 0.978 SE 36 36 None 0.0 M 23.2 M 19.3 M 0.702 0.83 0.84 7.03 150 2.24 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/e47c963a-1ad1-4eb9-be44-79ef588d2d1b/@@download/cross_correlation_plot/ENCFF001FPB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB847QXI john-stamatoyannopoulos:DS16152-library ENCFF001FPB Illumina Genome Analyzer 2016-08-10T01:14:37.860978+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p8J003692492P6GkGQxJ0 ENCSR000DPQ https://www.encodeproject.org/experiments/ENCSR000DPQ control Control-human fibroblast of pedal digit skin primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF525BCB https://www.encodeproject.org/files/ENCFF525BCB/@@download/ENCFF525BCB.bam ENCFF098RZI https://www.encodeproject.org/files/ENCFF098RZI/@@download/ENCFF098RZI.bam 9.7 M 0 9.6 M 0.986 SE 36 36 native 0.0 M 7.2 M 7.1 M 0.731 1.00 1.00 249.30 75 1.01 0.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/69a0098a-0ee8-4812-a668-fc56aa6035aa/@@download/cross_correlation_plot/ENCFF001GXK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB989XGM john-stamatoyannopoulos:DS16030-library ENCFF001GXK Illumina Genome Analyzer 2016-08-09T16:02:15.700465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ78Q0369F97Byg82v2pqg ENCSR000DPP https://www.encodeproject.org/experiments/ENCSR000DPP "transcription factor,RNA binding protein" CTCF-human fibroblast of pedal digit skin primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF135FSJ https://www.encodeproject.org/files/ENCFF135FSJ/@@download/ENCFF135FSJ.bam ENCFF156OKM https://www.encodeproject.org/files/ENCFF156OKM/@@download/ENCFF156OKM.bam 17.4 M 0 16.7 M 0.962 SE 36 36 native 0.0 M 13.3 M 11.6 M 0.669 0.88 0.89 9.44 120 3.20 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/189e022c-9ab7-4400-b565-3c7080ce9960/@@download/cross_correlation_plot/ENCFF001GXJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB126GDH john-stamatoyannopoulos:DS16032-library ENCFF001GXJ Illumina Genome Analyzer II 2016-12-11T02:05:54.521574+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163kgj03692pJ09J76g5g1q ENCSR000DPP https://www.encodeproject.org/experiments/ENCSR000DPP "transcription factor,RNA binding protein" CTCF-human fibroblast of pedal digit skin primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF088ESD https://www.encodeproject.org/files/ENCFF088ESD/@@download/ENCFF088ESD.bam ENCFF420WDH https://www.encodeproject.org/files/ENCFF420WDH/@@download/ENCFF420WDH.bam 12.8 M 0 12.2 M 0.950 SE 36 36 native 0.0 M 9.4 M 8.9 M 0.695 0.95 0.95 20.07 90 2.13 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef45e15b-7841-46a6-a308-925a0982f94e/@@download/cross_correlation_plot/ENCFF001GXI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB395MEO john-stamatoyannopoulos:DS16031-library ENCFF001GXI Illumina Genome Analyzer II 2016-12-11T01:38:49.871116+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163kx003698ZxQY8q63X84V ENCSR000DPR https://www.encodeproject.org/experiments/ENCSR000DPR "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of pedal digit skin primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF377CAH https://www.encodeproject.org/files/ENCFF377CAH/@@download/ENCFF377CAH.bam ENCFF228PQR https://www.encodeproject.org/files/ENCFF228PQR/@@download/ENCFF228PQR.bam 29.7 M 0 29.3 M 0.985 SE 36 36 None 0.0 M 26.2 M 18.5 M 0.623 0.71 0.73 4.20 160 2.81 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2bb7fed-4a9c-4198-bb9d-95a886e4ea86/@@download/cross_correlation_plot/ENCFF001EOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB621FLI john-stamatoyannopoulos:DS16034-library ENCFF001EOO Illumina Genome Analyzer 2016-08-10T01:13:26.531182+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pFkj03695XxB1K8gfxQKj ENCSR000DPR https://www.encodeproject.org/experiments/ENCSR000DPR "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of pedal digit skin primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF696AAG https://www.encodeproject.org/files/ENCFF696AAG/@@download/ENCFF696AAG.bam ENCFF145DBO https://www.encodeproject.org/files/ENCFF145DBO/@@download/ENCFF145DBO.bam 20.7 M 0 20.4 M 0.984 SE 36 36 None 0.0 M 18.0 M 14.2 M 0.686 0.79 0.81 5.77 140 3.08 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9c6a664-170d-4bec-88d5-02dde4eb1f49/@@download/cross_correlation_plot/ENCFF001EOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB386GXX john-stamatoyannopoulos:DS16033-library ENCFF001EOL Illumina Genome Analyzer 2016-08-10T01:13:33.555563+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pFv80369BJjV7XZgY1JfP ENCSR000DUY https://www.encodeproject.org/experiments/ENCSR000DUY control Control-human fibroblast of pulmonary artery primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF886XYV https://www.encodeproject.org/files/ENCFF886XYV/@@download/ENCFF886XYV.bam ENCFF160XMD https://www.encodeproject.org/files/ENCFF160XMD/@@download/ENCFF160XMD.bam 25.2 M 0 24.5 M 0.972 SE 36 36 native 0.0 M 18.1 M 18.0 M 0.714 1.00 1.00 315.05 115 1.01 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0157692-731f-4d3d-b0d2-4a0ac5dedf13/@@download/cross_correlation_plot/ENCFF001HQN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB127NDB john-stamatoyannopoulos:DS16177-library ENCFF001HQN Illumina Genome Analyzer 2016-08-09T16:01:58.571937+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZB380369BB4PPpG2jBj43 ENCSR000DUX https://www.encodeproject.org/experiments/ENCSR000DUX "transcription factor,RNA binding protein" CTCF-human fibroblast of pulmonary artery primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF288FQY https://www.encodeproject.org/files/ENCFF288FQY/@@download/ENCFF288FQY.bam ENCFF754AWE https://www.encodeproject.org/files/ENCFF754AWE/@@download/ENCFF754AWE.bam 31.9 M 0 30.9 M 0.970 SE 36 36 native 0.0 M 25.3 M 20.7 M 0.649 0.82 0.84 7.16 125 2.70 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/f50a39a8-c60a-4b18-9753-482ca2a1837d/@@download/cross_correlation_plot/ENCFF001HQL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB650EFP john-stamatoyannopoulos:DS16179-library ENCFF001HQL Illumina Genome Analyzer II 2016-12-11T04:42:48.610435+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165kJQ0369GF0YB1zjPf721 ENCSR000DUX https://www.encodeproject.org/experiments/ENCSR000DUX "transcription factor,RNA binding protein" CTCF-human fibroblast of pulmonary artery primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF647KJA https://www.encodeproject.org/files/ENCFF647KJA/@@download/ENCFF647KJA.bam ENCFF616SYW https://www.encodeproject.org/files/ENCFF616SYW/@@download/ENCFF616SYW.bam 32.9 M 0 32.1 M 0.976 SE 36 36 native 0.0 M 25.9 M 22.7 M 0.689 0.87 0.90 11.38 115 2.18 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/493b8226-ae75-4f12-a590-ea9d860ca714/@@download/cross_correlation_plot/ENCFF001HQM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB101LVV john-stamatoyannopoulos:DS16178-library ENCFF001HQM Illumina Genome Analyzer II 2016-12-11T04:42:44.611312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165kXQ0369445BJJ915X9vF ENCSR000DUZ https://www.encodeproject.org/experiments/ENCSR000DUZ "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of pulmonary artery primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF452SUH https://www.encodeproject.org/files/ENCFF452SUH/@@download/ENCFF452SUH.bam ENCFF776NDY https://www.encodeproject.org/files/ENCFF776NDY/@@download/ENCFF776NDY.bam 27.6 M 0 27.1 M 0.981 SE 36 36 None 0.0 M 24.1 M 18.4 M 0.665 0.76 0.78 4.91 150 2.49 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee142446-6de5-4878-8fc2-2bc131aa4681/@@download/cross_correlation_plot/ENCFF001FPG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB651YBK john-stamatoyannopoulos:DS16153-library ENCFF001FPG Illumina Genome Analyzer 2016-08-10T01:15:00.115935+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p8Pj03692ZV2Y8jk0GZ10 ENCSR000DUZ https://www.encodeproject.org/experiments/ENCSR000DUZ "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of pulmonary artery primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF016CNU https://www.encodeproject.org/files/ENCFF016CNU/@@download/ENCFF016CNU.bam ENCFF741KEC https://www.encodeproject.org/files/ENCFF741KEC/@@download/ENCFF741KEC.bam 29.5 M 0 28.7 M 0.972 SE 36 36 None 0.0 M 25.4 M 19.3 M 0.652 0.76 0.78 4.94 160 2.42 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1665a66-555b-4755-b3c4-4430c227080e/@@download/cross_correlation_plot/ENCFF001FPN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695DFO john-stamatoyannopoulos:DS16154-library ENCFF001FPN Illumina Genome Analyzer 2016-08-10T01:14:56.121971+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p8X003699F2k1Gvk7G0BX ENCSR000DPW https://www.encodeproject.org/experiments/ENCSR000DPW control Control-human fibroblast of skin of abdomen primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF085CHA https://www.encodeproject.org/files/ENCFF085CHA/@@download/ENCFF085CHA.bam ENCFF258DWA https://www.encodeproject.org/files/ENCFF258DWA/@@download/ENCFF258DWA.bam 23.9 M 0 23.4 M 0.978 SE 36 36 native 0.0 M 18.1 M 18.0 M 0.751 0.99 0.99 186.49 90 1.02 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4bf40b3-e7ca-4b91-9202-8b69cc142b9b/@@download/cross_correlation_plot/ENCFF001GYO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB215CAQ john-stamatoyannopoulos:DS15911-library ENCFF001GYO Illumina Genome Analyzer 2016-08-09T16:02:40.288355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7JQ03696GPBjjv2bkQyQ ENCSR000DPV https://www.encodeproject.org/experiments/ENCSR000DPV "transcription factor,RNA binding protein" CTCF-human fibroblast of skin of abdomen primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF672YBO https://www.encodeproject.org/files/ENCFF672YBO/@@download/ENCFF672YBO.bam ENCFF045ZZK https://www.encodeproject.org/files/ENCFF045ZZK/@@download/ENCFF045ZZK.bam 32.2 M 0 31.5 M 0.976 SE 36 36 native 0.0 M 25.1 M 21.8 M 0.676 0.87 0.88 8.85 100 1.84 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d6c4c18-0caa-4f72-89c9-9eaf2b35a8b9/@@download/cross_correlation_plot/ENCFF001GYP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB122IIC john-stamatoyannopoulos:DS16037-library ENCFF001GYP Illumina Genome Analyzer II 2016-12-11T04:02:02.343552+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164xxj036904pZZ8v3bkg7b ENCSR000DPV https://www.encodeproject.org/experiments/ENCSR000DPV "transcription factor,RNA binding protein" CTCF-human fibroblast of skin of abdomen primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF024CIJ https://www.encodeproject.org/files/ENCFF024CIJ/@@download/ENCFF024CIJ.bam ENCFF189RKM https://www.encodeproject.org/files/ENCFF189RKM/@@download/ENCFF189RKM.bam 34.9 M 0 34.1 M 0.977 SE 36 36 native 0.0 M 27.5 M 23.7 M 0.680 0.86 0.89 10.23 105 2.04 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3863e33-2c91-46dd-827a-66e18511af42/@@download/cross_correlation_plot/ENCFF001GYQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB117QMX john-stamatoyannopoulos:DS16038-library ENCFF001GYQ Illumina Genome Analyzer II 2016-12-11T04:03:20.574526+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164y280369KQ3Yk1yz1kgZP ENCSR000DPX https://www.encodeproject.org/experiments/ENCSR000DPX "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of skin of abdomen primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF382WAP https://www.encodeproject.org/files/ENCFF382WAP/@@download/ENCFF382WAP.bam ENCFF025OGL https://www.encodeproject.org/files/ENCFF025OGL/@@download/ENCFF025OGL.bam 30.4 M 0 29.5 M 0.972 SE 36 36 None 0.0 M 25.5 M 20.8 M 0.685 0.82 0.84 6.86 130 2.28 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e6bc9c7-4da2-4fef-9d0e-e465fc77d407/@@download/cross_correlation_plot/ENCFF001EPT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB963CPC john-stamatoyannopoulos:DS15744-library ENCFF001EPT Illumina Genome Analyzer 2016-08-10T01:14:13.548556+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pFQ80369BjkVxP0gkkqQv ENCSR000DPX https://www.encodeproject.org/experiments/ENCSR000DPX "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of skin of abdomen primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF022XXD https://www.encodeproject.org/files/ENCFF022XXD/@@download/ENCFF022XXD.bam ENCFF623NAR https://www.encodeproject.org/files/ENCFF623NAR/@@download/ENCFF623NAR.bam 31.0 M 0 30.0 M 0.970 SE 36 36 None 0.0 M 25.8 M 21.3 M 0.687 0.82 0.84 7.13 120 2.28 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf218011-d4ba-4998-9d44-99ee2337e04b/@@download/cross_correlation_plot/ENCFF001EPS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB380BBI john-stamatoyannopoulos:DS15745-library ENCFF001EPS Illumina Genome Analyzer 2016-08-10T01:14:14.832034+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pFXQ0369JB9ykPvgzPPY2 ENCSR000DPZ https://www.encodeproject.org/experiments/ENCSR000DPZ control Control-human fibroblast of the aortic adventitia primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF436GDS https://www.encodeproject.org/files/ENCFF436GDS/@@download/ENCFF436GDS.bam ENCFF798MEL https://www.encodeproject.org/files/ENCFF798MEL/@@download/ENCFF798MEL.bam 25.7 M 0 25.3 M 0.984 SE 36 36 native 0.0 M 19.7 M 19.5 M 0.762 0.99 1.00 228.82 100 1.01 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/3635be94-8c9c-47b2-8748-4b64211cc824/@@download/cross_correlation_plot/ENCFF001GZF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB929WNN john-stamatoyannopoulos:DS15912-library ENCFF001GZF Illumina Genome Analyzer 2016-08-09T16:03:03.629655+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7Pj0369G0925gv2xQKzz ENCSR000DPY https://www.encodeproject.org/experiments/ENCSR000DPY "transcription factor,RNA binding protein" CTCF-human fibroblast of the aortic adventitia primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF887VLI https://www.encodeproject.org/files/ENCFF887VLI/@@download/ENCFF887VLI.bam ENCFF277LMD https://www.encodeproject.org/files/ENCFF277LMD/@@download/ENCFF277LMD.bam 11.3 M 0 10.8 M 0.956 SE 36 36 native 0.0 M 8.7 M 7.9 M 0.697 0.91 0.92 13.68 85 4.20 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ae44ec2-3206-41c5-a5db-4723a69251b9/@@download/cross_correlation_plot/ENCFF001GYV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB433FSJ john-stamatoyannopoulos:DS16040-library ENCFF001GYV Illumina Genome Analyzer II 2016-12-10T21:16:37.950834+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1639x003690xXYVJ7Fj2f0v ENCSR000DPY https://www.encodeproject.org/experiments/ENCSR000DPY "transcription factor,RNA binding protein" CTCF-human fibroblast of the aortic adventitia primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF971QGY https://www.encodeproject.org/files/ENCFF971QGY/@@download/ENCFF971QGY.bam ENCFF754FZR https://www.encodeproject.org/files/ENCFF754FZR/@@download/ENCFF754FZR.bam 36.2 M 0 35.2 M 0.973 SE 36 36 native 0.0 M 27.7 M 23.8 M 0.657 0.86 0.87 8.10 100 1.72 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/f88e3490-6f9a-4e3f-a64c-715cd85f7e9a/@@download/cross_correlation_plot/ENCFF001GYX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB155QDW john-stamatoyannopoulos:DS16039-library ENCFF001GYX Illumina Genome Analyzer II 2016-12-10T23:19:39.791031+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163B1j03698j1Pf95Q52xpK ENCSR000DQA https://www.encodeproject.org/experiments/ENCSR000DQA "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of the aortic adventitia primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF875SDR https://www.encodeproject.org/files/ENCFF875SDR/@@download/ENCFF875SDR.bam ENCFF882ANE https://www.encodeproject.org/files/ENCFF882ANE/@@download/ENCFF882ANE.bam 28.7 M 0 27.7 M 0.963 SE 36 36 None 0.0 M 24.0 M 19.0 M 0.662 0.79 0.81 5.82 115 2.68 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bb541ac-a796-4d29-9a2a-1172f9b9ac19/@@download/cross_correlation_plot/ENCFF001EQA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB651FNJ john-stamatoyannopoulos:DS15746-library ENCFF001EQA Illumina Genome Analyzer 2016-08-10T01:13:39.878258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pGFQ036962Q5vYZgxVQGg ENCSR000DQA https://www.encodeproject.org/experiments/ENCSR000DQA "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of the aortic adventitia primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF369EYB https://www.encodeproject.org/files/ENCFF369EYB/@@download/ENCFF369EYB.bam ENCFF673DIT https://www.encodeproject.org/files/ENCFF673DIT/@@download/ENCFF673DIT.bam 26.0 M 0 23.5 M 0.906 SE 36 36 None 0.0 M 19.0 M 16.0 M 0.615 0.84 0.86 8.06 105 2.10 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e3782a7-29c0-457e-95dc-f0073aa9e37e/@@download/cross_correlation_plot/ENCFF001EPZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB836SRK john-stamatoyannopoulos:DS15747-library ENCFF001EPZ Illumina Genome Analyzer 2016-08-10T01:13:45.744440+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pGK80369BjkVxP0gkkqVk ENCSR000DPH https://www.encodeproject.org/experiments/ENCSR000DPH control Control-human fibroblast of upper leg skin primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF353NNK https://www.encodeproject.org/files/ENCFF353NNK/@@download/ENCFF353NNK.bam ENCFF430CVT https://www.encodeproject.org/files/ENCFF430CVT/@@download/ENCFF430CVT.bam 19.8 M 0 19.0 M 0.959 SE 36 36 native 0.0 M 14.3 M 14.2 M 0.719 0.99 1.00 251.58 85 1.02 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e2400a5-93b3-42a6-ac80-a7e6c207d609/@@download/cross_correlation_plot/ENCFF001GWR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB132UUN john-stamatoyannopoulos:DS15908-library ENCFF001GWR Illumina Genome Analyzer 2016-08-09T16:02:43.473273+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ74Q0369G0925gv2xQKzY ENCSR000DPG https://www.encodeproject.org/experiments/ENCSR000DPG "transcription factor,RNA binding protein" CTCF-human fibroblast of upper leg skin primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF922HYP https://www.encodeproject.org/files/ENCFF922HYP/@@download/ENCFF922HYP.bam ENCFF059BYA https://www.encodeproject.org/files/ENCFF059BYA/@@download/ENCFF059BYA.bam 11.5 M 0 11.2 M 0.973 SE 36 36 native 0.0 M 9.4 M 7.4 M 0.643 0.79 0.84 8.12 95 8.19 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/983db204-87b2-4cba-ab64-45e3e24de69e/@@download/cross_correlation_plot/ENCFF001GWI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB827TZQ john-stamatoyannopoulos:DS15738-library ENCFF001GWI Illumina Genome Analyzer II 2016-12-11T04:47:18.968438+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1668480369KbxV61z4GFvxy ENCSR000DPG https://www.encodeproject.org/experiments/ENCSR000DPG "transcription factor,RNA binding protein" CTCF-human fibroblast of upper leg skin primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF350KMY https://www.encodeproject.org/files/ENCFF350KMY/@@download/ENCFF350KMY.bam ENCFF047XJJ https://www.encodeproject.org/files/ENCFF047XJJ/@@download/ENCFF047XJJ.bam 28.2 M 0 27.6 M 0.977 SE 36 36 native 0.0 M 21.9 M 20.2 M 0.715 0.92 0.94 22.27 90 1.99 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b8c5146-3d3d-4f06-a378-3ee9a20a036b/@@download/cross_correlation_plot/ENCFF001GWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB846DOG john-stamatoyannopoulos:DS15736-library ENCFF001GWK Illumina Genome Analyzer II 2016-12-11T04:57:06.385262+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16689j0369PvYp91zK1Pxjf ENCSR000DPI https://www.encodeproject.org/experiments/ENCSR000DPI "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of upper leg skin primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF913YPV https://www.encodeproject.org/files/ENCFF913YPV/@@download/ENCFF913YPV.bam ENCFF758DKE https://www.encodeproject.org/files/ENCFF758DKE/@@download/ENCFF758DKE.bam 26.0 M 0 25.5 M 0.979 SE 36 36 None 0.0 M 22.2 M 18.5 M 0.709 0.83 0.84 7.15 120 2.53 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/844e97c3-d62a-48c1-8d4d-b48b7efdb46c/@@download/cross_correlation_plot/ENCFF001ENA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB500JGW john-stamatoyannopoulos:DS15737-library ENCFF001ENA Illumina Genome Analyzer 2016-08-10T01:15:41.375690+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6p80369BJvqxV5vxVX3Q ENCSR000DPI https://www.encodeproject.org/experiments/ENCSR000DPI "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of upper leg skin primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF243VRS https://www.encodeproject.org/files/ENCFF243VRS/@@download/ENCFF243VRS.bam ENCFF918LNX https://www.encodeproject.org/files/ENCFF918LNX/@@download/ENCFF918LNX.bam 27.9 M 0 26.8 M 0.961 SE 36 36 None 0.0 M 22.7 M 19.2 M 0.688 0.85 0.86 8.08 110 2.30 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/093cba89-2f7a-400a-9d51-66aa8600e2d6/@@download/cross_correlation_plot/ENCFF001ENG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB201ZPK john-stamatoyannopoulos:DS15739-library ENCFF001ENG Illumina Genome Analyzer 2016-08-10T01:15:13.847495+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6vj0369PxgkxQJvqfQzf ENCSR000DVR https://www.encodeproject.org/experiments/ENCSR000DVR control Control-human fibroblast of villous mesenchyme primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF629FKE https://www.encodeproject.org/files/ENCFF629FKE/@@download/ENCFF629FKE.bam ENCFF280SOV https://www.encodeproject.org/files/ENCFF280SOV/@@download/ENCFF280SOV.bam 31.2 M 0 30.9 M 0.990 SE 36 36 native 0.0 M 23.5 M 23.4 M 0.750 1.00 1.00 242.51 100 1.01 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/343a7383-8035-461e-b739-851ca8208d6b/@@download/cross_correlation_plot/ENCFF001HTK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB557CYI john-stamatoyannopoulos:DS16190-library ENCFF001HTK Illumina Genome Analyzer 2016-08-09T16:02:08.190287+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZBQ0036927gfXkG2b30G8 ENCSR000DVQ https://www.encodeproject.org/experiments/ENCSR000DVQ "transcription factor,RNA binding protein" CTCF-human fibroblast of villous mesenchyme primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF150BQN https://www.encodeproject.org/files/ENCFF150BQN/@@download/ENCFF150BQN.bam ENCFF704TGH https://www.encodeproject.org/files/ENCFF704TGH/@@download/ENCFF704TGH.bam 18.0 M 0 16.9 M 0.943 SE 36 36 native 0.0 M 13.5 M 12.0 M 0.670 0.89 0.90 9.95 140 2.56 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e9dbf1e-3443-45c4-920b-b579598f3fee/@@download/cross_correlation_plot/ENCFF001HSW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB549LSD john-stamatoyannopoulos:DS18571-library ENCFF001HSW Illumina Genome Analyzer 2016-12-11T03:14:52.914453+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Vb003695Kj1j8qPQgkbV ENCSR000DVQ https://www.encodeproject.org/experiments/ENCSR000DVQ "transcription factor,RNA binding protein" CTCF-human fibroblast of villous mesenchyme primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF537KZX https://www.encodeproject.org/files/ENCFF537KZX/@@download/ENCFF537KZX.bam ENCFF020SVH https://www.encodeproject.org/files/ENCFF020SVH/@@download/ENCFF020SVH.bam 14.8 M 0 12.8 M 0.863 SE 36 36 native 0.0 M 10.4 M 9.1 M 0.615 0.88 0.88 8.96 130 3.38 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e23336f-5063-42c8-aa8f-79bf2b5204e7/@@download/cross_correlation_plot/ENCFF001HSX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB515XGC john-stamatoyannopoulos:DS18572-library ENCFF001HSX Illumina Genome Analyzer 2016-12-11T03:08:38.062532+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Vp003695v47P6433JJ12 ENCSR000DVS https://www.encodeproject.org/experiments/ENCSR000DVS "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of villous mesenchyme primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF336RRY https://www.encodeproject.org/files/ENCFF336RRY/@@download/ENCFF336RRY.bam ENCFF257XWO https://www.encodeproject.org/files/ENCFF257XWO/@@download/ENCFF257XWO.bam 28.1 M 0 27.1 M 0.965 SE 36 36 None 0.0 M 23.4 M 18.9 M 0.673 0.81 0.82 6.19 160 2.37 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/92d3c18e-1a84-4716-ae5f-aa116f8d8e0b/@@download/cross_correlation_plot/ENCFF001FTM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB033WWQ john-stamatoyannopoulos:DS16156-library ENCFF001FTM Illumina Genome Analyzer 2016-08-10T01:14:01.302515+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBx80369J0gjYVZgfFVXV ENCSR000DVS https://www.encodeproject.org/experiments/ENCSR000DVS "histone,histone modification,narrow histone mark" H3K4me3-human fibroblast of villous mesenchyme primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF398APA https://www.encodeproject.org/files/ENCFF398APA/@@download/ENCFF398APA.bam ENCFF478KAR https://www.encodeproject.org/files/ENCFF478KAR/@@download/ENCFF478KAR.bam 28.6 M 0 27.9 M 0.974 SE 36 36 None 0.0 M 23.5 M 19.6 M 0.686 0.84 0.85 7.23 135 2.27 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb114630-dc4a-4cd5-b44c-049e0ae3ed45/@@download/cross_correlation_plot/ENCFF001FTN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB280AKL john-stamatoyannopoulos:DS16155-library ENCFF001FTN Illumina Genome Analyzer 2016-08-10T01:14:32.724544+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBzQ0369J0gjYVZgfFVXp ENCSR000DQE https://www.encodeproject.org/experiments/ENCSR000DQE control Control-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF517WZK https://www.encodeproject.org/files/ENCFF517WZK/@@download/ENCFF517WZK.bam ENCFF932RYQ https://www.encodeproject.org/files/ENCFF932RYQ/@@download/ENCFF932RYQ.bam 19.7 M 0 19.2 M 0.979 SE 36 36 native 0.0 M 14.0 M 13.8 M 0.701 0.99 0.99 69.05 105 1.02 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/84140de0-8aa8-4b47-a877-40ec0572b93c/@@download/cross_correlation_plot/ENCFF001HAG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695NME john-stamatoyannopoulos:DS11544-library ENCFF001HAG Illumina Genome Analyzer 2016-08-09T16:02:45.117157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7Zj03691jjxffj2bKqPq ENCSR000DUI https://www.encodeproject.org/experiments/ENCSR000DUI control Control-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF342YSK https://www.encodeproject.org/files/ENCFF342YSK/@@download/ENCFF342YSK.bam ENCFF437IOA https://www.encodeproject.org/files/ENCFF437IOA/@@download/ENCFF437IOA.bam 22.2 M 0 21.8 M 0.984 SE 36 36 native 0.0 M 16.3 M 16.0 M 0.721 0.98 0.98 66.62 140 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/984bfb10-8634-4c4c-a332-d040afd0d212/@@download/cross_correlation_plot/ENCFF001HON.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB384FFQ john-stamatoyannopoulos:DS18316-library ENCFF001HON Illumina Genome Analyzer 2016-08-09T16:01:54.588484+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9g80369BB4PPpG2jBj3P ENCSR000DWR https://www.encodeproject.org/experiments/ENCSR000DWR control Control-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF700CVK https://www.encodeproject.org/files/ENCFF700CVK/@@download/ENCFF700CVK.bam ENCFF707TMD https://www.encodeproject.org/files/ENCFF707TMD/@@download/ENCFF707TMD.bam 33.9 M 0 33.4 M 0.987 SE 36 36 native 0.0 M 25.9 M 25.7 M 0.760 0.99 0.99 170.59 65 1.01 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/581ebf0c-df12-41a4-a760-700d90e38828/@@download/cross_correlation_plot/ENCFF001HVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB741ROH john-stamatoyannopoulos:DS16203-library ENCFF001HVP Illumina Genome Analyzer 2016-08-09T16:02:41.743309+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZF0j0369BB4PPpG2jBj4v ENCSR000DQI https://www.encodeproject.org/experiments/ENCSR000DQI "transcription factor,RNA binding protein" CTCF-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF971SCT https://www.encodeproject.org/files/ENCFF971SCT/@@download/ENCFF971SCT.bam ENCFF889KCB https://www.encodeproject.org/files/ENCFF889KCB/@@download/ENCFF889KCB.bam 30.4 M 0 21.6 M 0.710 SE 36 36 native 0.0 M 17.5 M 10.7 M 0.351 0.61 0.60 2.35 140 4.45 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/c518354f-365c-4103-b1b1-a5f29e507371/@@download/cross_correlation_plot/ENCFF001GZW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB029LBI john-stamatoyannopoulos:DS11560-library ENCFF001GZW Illumina Genome Analyzer II 2016-12-10T22:06:23.525355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Fqj0369K8k6p8qBf9q2B ENCSR000DQI https://www.encodeproject.org/experiments/ENCSR000DQI "transcription factor,RNA binding protein" CTCF-human foreskin fibroblast primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF152LFC https://www.encodeproject.org/files/ENCFF152LFC/@@download/ENCFF152LFC.bam ENCFF243LUI https://www.encodeproject.org/files/ENCFF243LUI/@@download/ENCFF243LUI.bam 15.9 M 0 11.7 M 0.738 SE 36 36 native 0.0 M 9.3 M 8.1 M 0.512 0.87 0.88 8.72 135 4.02 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f48110d-68be-4c07-bb2f-95719290d6ba/@@download/cross_correlation_plot/ENCFF001GZX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB669WNO john-stamatoyannopoulos:DS11562-library ENCFF001GZX Illumina Genome Analyzer II 2016-12-10T21:38:24.300777+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163G080369GF0YB1zjPf6QY ENCSR000DUH https://www.encodeproject.org/experiments/ENCSR000DUH "transcription factor,RNA binding protein" CTCF-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF361TNY https://www.encodeproject.org/files/ENCFF361TNY/@@download/ENCFF361TNY.bam ENCFF403CLR https://www.encodeproject.org/files/ENCFF403CLR/@@download/ENCFF403CLR.bam 20.7 M 0 16.7 M 0.806 SE 36 36 native 0.0 M 13.4 M 10.2 M 0.491 0.76 0.75 3.93 145 2.87 2.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/25dd179a-0870-406d-8b4d-1fd8383ba721/@@download/cross_correlation_plot/ENCFF001HOE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB909ZHR john-stamatoyannopoulos:DS18318-library ENCFF001HOE Illumina Genome Analyzer 2017-04-21T05:22:22.119240+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3vjGx80369Bq3xP0v3Z0JQZ ENCSR000DWQ https://www.encodeproject.org/experiments/ENCSR000DWQ "transcription factor,RNA binding protein" CTCF-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF775ONC https://www.encodeproject.org/files/ENCFF775ONC/@@download/ENCFF775ONC.bam ENCFF249ZDB https://www.encodeproject.org/files/ENCFF249ZDB/@@download/ENCFF249ZDB.bam 26.5 M 0 21.3 M 0.806 SE 36 36 native 0.0 M 17.1 M 14.8 M 0.558 0.86 0.87 8.24 135 2.70 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/cbb323b9-117c-4c03-a42f-9a9c32b8ba21/@@download/cross_correlation_plot/ENCFF001HVA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB372NFI john-stamatoyannopoulos:DS16204-library ENCFF001HVA Illumina Genome Analyzer 2016-12-10T19:14:37.315536+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162PJj03695Kj1j8qPQgk9f ENCSR000DWQ https://www.encodeproject.org/experiments/ENCSR000DWQ "transcription factor,RNA binding protein" CTCF-human foreskin fibroblast primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF219PMT https://www.encodeproject.org/files/ENCFF219PMT/@@download/ENCFF219PMT.bam ENCFF245XWI https://www.encodeproject.org/files/ENCFF245XWI/@@download/ENCFF245XWI.bam 27.8 M 0 24.9 M 0.896 SE 36 36 native 0.0 M 20.0 M 18.8 M 0.675 0.94 0.94 18.38 145 1.69 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/34d83423-2808-49d9-bb62-464e47fe6bb2/@@download/cross_correlation_plot/ENCFF001HVJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB761GCS john-stamatoyannopoulos:DS16205-library ENCFF001HVJ Illumina Genome Analyzer 2016-12-10T19:09:59.386298+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162PXQ03696Kk1YFv8qy50b ENCSR000DQG https://www.encodeproject.org/experiments/ENCSR000DQG "histone,histone modification,broad histone mark" H3K27me3-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF415WLX https://www.encodeproject.org/files/ENCFF415WLX/@@download/ENCFF415WLX.bam ENCFF400UZY https://www.encodeproject.org/files/ENCFF400UZY/@@download/ENCFF400UZY.bam 14.0 M 0 13.4 M 0.954 SE 36 36 native 0.0 M 9.8 M 9.6 M 0.683 0.97 0.97 34.71 120 1.05 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/bac0f036-2948-402a-bc8e-22d9120bd649/@@download/cross_correlation_plot/ENCFF001EQX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB463UWX john-stamatoyannopoulos:DS12194-library ENCFF001EQX Illumina Genome Analyzer 2016-10-26T17:42:40.911323+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08268j0369BqVfYq19ZB8z7 ENCSR000DQG https://www.encodeproject.org/experiments/ENCSR000DQG "histone,histone modification,broad histone mark" H3K27me3-human foreskin fibroblast primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF268CGC https://www.encodeproject.org/files/ENCFF268CGC/@@download/ENCFF268CGC.bam ENCFF064LIX https://www.encodeproject.org/files/ENCFF064LIX/@@download/ENCFF064LIX.bam 18.5 M 0 17.2 M 0.930 SE 36 36 native 0.0 M 12.9 M 12.6 M 0.680 0.97 0.97 36.26 105 1.05 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/788510bc-5dc6-4bf2-b954-7715760c3c1c/@@download/cross_correlation_plot/ENCFF001ERF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB926WTX john-stamatoyannopoulos:DS12197-library ENCFF001ERF Illumina Genome Analyzer 2016-10-26T17:42:34.918631+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826Q003698F1qV3kBFq310 ENCSR000DQF https://www.encodeproject.org/experiments/ENCSR000DQF "histone,histone modification,broad histone mark" H3K36me3-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF316ULC https://www.encodeproject.org/files/ENCFF316ULC/@@download/ENCFF316ULC.bam ENCFF623NOM https://www.encodeproject.org/files/ENCFF623NOM/@@download/ENCFF623NOM.bam 18.3 M 0 17.7 M 0.970 SE 36 36 native 0.0 M 13.0 M 12.5 M 0.685 0.96 0.96 28.22 120 1.07 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba3da8c7-bed8-4eeb-8495-988969044da0/@@download/cross_correlation_plot/ENCFF001ERN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB603TXU john-stamatoyannopoulos:DS12198-library ENCFF001ERN Illumina Genome Analyzer 2016-10-26T17:38:06.894599+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082JF803697KPkyX9BPPq5x ENCSR000DQF https://www.encodeproject.org/experiments/ENCSR000DQF "histone,histone modification,broad histone mark" H3K36me3-human foreskin fibroblast primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF067IGK https://www.encodeproject.org/files/ENCFF067IGK/@@download/ENCFF067IGK.bam ENCFF566LMQ https://www.encodeproject.org/files/ENCFF566LMQ/@@download/ENCFF566LMQ.bam 18.4 M 0 17.8 M 0.967 SE 36 36 native 0.0 M 12.9 M 12.4 M 0.675 0.96 0.96 23.57 100 1.06 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/40c2b2ad-174e-48e7-9596-c1235fd667d3/@@download/cross_correlation_plot/ENCFF001ERO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB757TOM john-stamatoyannopoulos:DS12195-library ENCFF001ERO Illumina Genome Analyzer 2016-10-26T17:37:36.966830+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082JV803694q32PPxBJ67V5 ENCSR000DQH https://www.encodeproject.org/experiments/ENCSR000DQH "histone,histone modification,narrow histone mark" H3K4me3-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF311CVR https://www.encodeproject.org/files/ENCFF311CVR/@@download/ENCFF311CVR.bam ENCFF037FUO https://www.encodeproject.org/files/ENCFF037FUO/@@download/ENCFF037FUO.bam 14.6 M 0 13.4 M 0.917 SE 36 36 None 0.0 M 11.5 M 10.2 M 0.697 0.89 0.89 9.72 155 3.06 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab323e78-b979-4308-ae35-cfad160b0e96/@@download/cross_correlation_plot/ENCFF001ERS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB278KKN john-stamatoyannopoulos:DS11563-library ENCFF001ERS Illumina Genome Analyzer 2016-08-10T01:12:52.511123+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJv8036962Q5vYZgxVQKP ENCSR000DQH https://www.encodeproject.org/experiments/ENCSR000DQH "histone,histone modification,narrow histone mark" H3K4me3-human foreskin fibroblast primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF322CYX https://www.encodeproject.org/files/ENCFF322CYX/@@download/ENCFF322CYX.bam ENCFF784QBX https://www.encodeproject.org/files/ENCFF784QBX/@@download/ENCFF784QBX.bam 23.6 M 0 17.9 M 0.757 SE 36 36 None 0.0 M 15.1 M 12.8 M 0.540 0.85 0.86 7.33 150 3.00 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/6499fe43-d9fa-4546-8687-aaa5721defa5/@@download/cross_correlation_plot/ENCFF001ESA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB895ROR john-stamatoyannopoulos:DS11561-library ENCFF001ESA Illumina Genome Analyzer 2016-08-10T01:12:39.820015+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJy8036962Q5vYZgxVQKg ENCSR000DUJ https://www.encodeproject.org/experiments/ENCSR000DUJ "histone,histone modification,narrow histone mark" H3K4me3-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF023FMY https://www.encodeproject.org/files/ENCFF023FMY/@@download/ENCFF023FMY.bam ENCFF305QCF https://www.encodeproject.org/files/ENCFF305QCF/@@download/ENCFF305QCF.bam 22.5 M 0 20.1 M 0.890 SE 36 36 native 0.0 M 18.1 M 14.6 M 0.649 0.81 0.81 5.59 185 2.44 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/f74da6a7-177a-4b65-8100-10721ea992c5/@@download/cross_correlation_plot/ENCFF001FMX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB111SOO john-stamatoyannopoulos:DS18320-library ENCFF001FMX Illumina Genome Analyzer 2016-08-20T00:46:58.416258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZKyQ0369G6FjGyG820kfj ENCSR000DWS https://www.encodeproject.org/experiments/ENCSR000DWS "histone,histone modification,narrow histone mark" H3K4me3-human foreskin fibroblast primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF153HAO https://www.encodeproject.org/files/ENCFF153HAO/@@download/ENCFF153HAO.bam ENCFF066CFZ https://www.encodeproject.org/files/ENCFF066CFZ/@@download/ENCFF066CFZ.bam 34.2 M 0 33.7 M 0.985 SE 36 36 None 0.0 M 29.3 M 24.0 M 0.700 0.82 0.84 7.03 145 2.03 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/591672db-d09d-4ba7-954a-be774e3330a2/@@download/cross_correlation_plot/ENCFF001FZI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB645GYL john-stamatoyannopoulos:DS16206-library ENCFF001FZI Illumina Genome Analyzer 2016-08-10T01:14:33.134904+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pB000369561xqZQgj50kk ENCSR000DWS https://www.encodeproject.org/experiments/ENCSR000DWS "histone,histone modification,narrow histone mark" H3K4me3-human foreskin fibroblast primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF224YBG https://www.encodeproject.org/files/ENCFF224YBG/@@download/ENCFF224YBG.bam ENCFF010EEG https://www.encodeproject.org/files/ENCFF010EEG/@@download/ENCFF010EEG.bam 35.6 M 0 34.9 M 0.981 SE 36 36 None 0.0 M 30.0 M 24.6 M 0.693 0.82 0.84 7.06 145 2.02 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/29daa02d-4817-4d4f-952e-8484a75367e4/@@download/cross_correlation_plot/ENCFF001FZQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB748FBL john-stamatoyannopoulos:DS16207-library ENCFF001FZQ Illumina Genome Analyzer 2016-08-10T01:14:40.224896+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pB2Q0369J0gjYVZgfFVVk ENCSR000DQS https://www.encodeproject.org/experiments/ENCSR000DQS control Control-human GM06990 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF186FRO https://www.encodeproject.org/files/ENCFF186FRO/@@download/ENCFF186FRO.bam ENCFF897RSN https://www.encodeproject.org/files/ENCFF897RSN/@@download/ENCFF897RSN.bam 16.3 M 0 15.9 M 0.975 SE 36 36 native 0.0 M 11.5 M 11.4 M 0.695 0.99 0.99 111.49 60 1.02 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/de61d5e1-e031-4a0a-b400-a721038399fd/@@download/cross_correlation_plot/ENCFF001HBK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB075DLK john-stamatoyannopoulos:DS11497-library ENCFF001HBK Illumina Genome Analyzer 2016-08-09T16:02:21.634017+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ7z003696GPBjjv2bkQyy ENCSR000DQW https://www.encodeproject.org/experiments/ENCSR000DQW "transcription factor,RNA binding protein" CTCF-human GM06990 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF545IDM https://www.encodeproject.org/files/ENCFF545IDM/@@download/ENCFF545IDM.bam ENCFF843CGE https://www.encodeproject.org/files/ENCFF843CGE/@@download/ENCFF843CGE.bam 31.6 M 0 21.3 M 0.674 SE 36 36 native 0.0 M 16.9 M 7.3 M 0.230 0.43 0.38 1.41 130 3.19 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ae5237a-fd3a-4fce-b9df-a09e9c3ee42c/@@download/cross_correlation_plot/ENCFF001HBC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB605YRS john-stamatoyannopoulos:DS11518-library ENCFF001HBC Illumina Genome Analyzer II 2016-12-11T04:07:48.477049+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1659Q80369BgG8x1ygv1XGg ENCSR000DQW https://www.encodeproject.org/experiments/ENCSR000DQW "transcription factor,RNA binding protein" CTCF-human GM06990 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF993RDX https://www.encodeproject.org/files/ENCFF993RDX/@@download/ENCFF993RDX.bam ENCFF926GLG https://www.encodeproject.org/files/ENCFF926GLG/@@download/ENCFF926GLG.bam 34.8 M 0 25.0 M 0.716 SE 36 36 native 0.0 M 19.7 M 9.2 M 0.263 0.47 0.42 1.53 135 2.82 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/267c29bc-7b3a-4710-8a3f-5462cbe3e9b8/@@download/cross_correlation_plot/ENCFF001HBD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB276QET john-stamatoyannopoulos:DS11520-library ENCFF001HBD Illumina Genome Analyzer II 2016-12-11T04:10:16.133378+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1659b00369GF0YB1zjPf6vV ENCSR000DQU https://www.encodeproject.org/experiments/ENCSR000DQU "histone,histone modification,broad histone mark" H3K27me3-human GM06990 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF458QQR https://www.encodeproject.org/files/ENCFF458QQR/@@download/ENCFF458QQR.bam ENCFF408GIU https://www.encodeproject.org/files/ENCFF408GIU/@@download/ENCFF408GIU.bam 19.4 M 0 18.3 M 0.947 SE 36 36 native 0.0 M 14.2 M 13.7 M 0.707 0.97 0.97 29.90 125 1.04 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/d591a84d-2175-4814-b653-34c602ca1068/@@download/cross_correlation_plot/ENCFF001EUN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB505WAE john-stamatoyannopoulos:DS12191-library ENCFF001EUN Illumina Genome Analyzer 2016-10-26T17:38:13.972246+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827j00369F7fQjy59kFgxj ENCSR000DQU https://www.encodeproject.org/experiments/ENCSR000DQU "histone,histone modification,broad histone mark" H3K27me3-human GM06990 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF778KXZ https://www.encodeproject.org/files/ENCFF778KXZ/@@download/ENCFF778KXZ.bam ENCFF030DNT https://www.encodeproject.org/files/ENCFF030DNT/@@download/ENCFF030DNT.bam 12.8 M 0 12.3 M 0.958 SE 36 36 native 0.0 M 9.3 M 9.1 M 0.712 0.98 0.98 44.90 125 1.04 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/b07cd68c-d45d-445a-9684-fb752f36bb61/@@download/cross_correlation_plot/ENCFF001EUM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB777SHS john-stamatoyannopoulos:DS12188-library ENCFF001EUM Illumina Genome Analyzer 2016-10-26T17:37:27.585262+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827xj0369F7fQjy59kFgy4 ENCSR000DQT https://www.encodeproject.org/experiments/ENCSR000DQT "histone,histone modification,broad histone mark" H3K36me3-human GM06990 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF869CAU https://www.encodeproject.org/files/ENCFF869CAU/@@download/ENCFF869CAU.bam ENCFF949HQT https://www.encodeproject.org/files/ENCFF949HQT/@@download/ENCFF949HQT.bam 18.6 M 0 17.9 M 0.966 SE 36 36 native 0.0 M 13.2 M 12.8 M 0.689 0.97 0.97 34.77 100 1.07 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e406a77-00db-4644-bd34-9568d9af4bd7/@@download/cross_correlation_plot/ENCFF001EUX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB568GVJ john-stamatoyannopoulos:DS12192-library ENCFF001EUX Illumina Genome Analyzer 2016-10-26T17:38:34.240011+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826Zj0369BX1xqb1B808f4 ENCSR000DQT https://www.encodeproject.org/experiments/ENCSR000DQT "histone,histone modification,broad histone mark" H3K36me3-human GM06990 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF326DCB https://www.encodeproject.org/files/ENCFF326DCB/@@download/ENCFF326DCB.bam ENCFF558EBU https://www.encodeproject.org/files/ENCFF558EBU/@@download/ENCFF558EBU.bam 18.5 M 0 18.0 M 0.975 SE 36 36 native 0.0 M 13.3 M 12.9 M 0.696 0.97 0.97 34.02 120 1.06 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/f96396ca-ee4c-4fc5-9758-eee86a609a6e/@@download/cross_correlation_plot/ENCFF001EUZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB438QJH john-stamatoyannopoulos:DS12189-library ENCFF001EUZ Illumina Genome Analyzer 2016-10-26T17:38:34.787633+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826vj0369GJ6xQfbB7BkKf ENCSR000DQV https://www.encodeproject.org/experiments/ENCSR000DQV "histone,histone modification,narrow histone mark" H3K4me3-human GM06990 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF908CRL https://www.encodeproject.org/files/ENCFF908CRL/@@download/ENCFF908CRL.bam ENCFF575LGT https://www.encodeproject.org/files/ENCFF575LGT/@@download/ENCFF575LGT.bam 14.4 M 0 13.3 M 0.927 SE 36 36 None 0.0 M 11.4 M 10.2 M 0.712 0.90 0.90 10.60 150 2.59 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/e12b2c99-8842-4c3e-9d18-407eeaf4aec6/@@download/cross_correlation_plot/ENCFF001EVC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB577WEX john-stamatoyannopoulos:DS11521-library ENCFF001EVC Illumina Genome Analyzer 2016-08-10T01:14:42.571595+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7P80369BJvqxV5vxVX4g ENCSR000DQV https://www.encodeproject.org/experiments/ENCSR000DQV "histone,histone modification,narrow histone mark" H3K4me3-human GM06990 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF048WTZ https://www.encodeproject.org/files/ENCFF048WTZ/@@download/ENCFF048WTZ.bam ENCFF202QKB https://www.encodeproject.org/files/ENCFF202QKB/@@download/ENCFF202QKB.bam 22.5 M 0 19.8 M 0.882 SE 36 36 None 0.0 M 16.3 M 14.2 M 0.630 0.87 0.88 8.61 135 2.30 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec819597-eafa-4922-8c11-92885fdd3181/@@download/cross_correlation_plot/ENCFF001EVD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB977OYX john-stamatoyannopoulos:DS11519-library ENCFF001EVD Illumina Genome Analyzer 2016-08-10T01:14:49.848915+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7V803695b8XJVxvzFzfK ENCSR000DQX https://www.encodeproject.org/experiments/ENCSR000DQX control Control-human GM12801 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF572DEU https://www.encodeproject.org/files/ENCFF572DEU/@@download/ENCFF572DEU.bam ENCFF439ZLD https://www.encodeproject.org/files/ENCFF439ZLD/@@download/ENCFF439ZLD.bam 16.9 M 0 16.2 M 0.955 SE 36 36 native 0.0 M 11.9 M 11.7 M 0.692 0.99 0.99 80.45 95 1.02 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b7c1c24-be99-42ec-b634-51ac8fac83a8/@@download/cross_correlation_plot/ENCFF001HBT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB516XKQ john-stamatoyannopoulos:DS13665-library ENCFF001HBT Illumina Genome Analyzer II 2016-10-26T17:42:38.054798+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F081zV00369BqVfYq19ZB8vg ENCSR000DQY https://www.encodeproject.org/experiments/ENCSR000DQY "transcription factor,RNA binding protein" CTCF-human GM12801 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF503DXB https://www.encodeproject.org/files/ENCFF503DXB/@@download/ENCFF503DXB.bam ENCFF744INV https://www.encodeproject.org/files/ENCFF744INV/@@download/ENCFF744INV.bam 12.3 M 0 6.9 M 0.562 SE 28 28 native 0.0 M 4.2 M 4.2 M 0.339 0.99 0.99 98.23 120 1.35 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/5dccf3f4-c54b-4c9b-a84a-6ae0720b45fb/@@download/cross_correlation_plot/ENCFF001HBY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB603XZW john-stamatoyannopoulos:DS8755-library ENCFF001HBY Illumina Genome Analyzer II 2017-04-04T16:58:28.137461+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3VpkvQ036997b7PPP8g318Q ENCSR000DRA https://www.encodeproject.org/experiments/ENCSR000DRA control Control-human GM12864 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF219TDW https://www.encodeproject.org/files/ENCFF219TDW/@@download/ENCFF219TDW.bam ENCFF749RTG https://www.encodeproject.org/files/ENCFF749RTG/@@download/ENCFF749RTG.bam 18.0 M 0 17.6 M 0.974 SE 36 36 native 0.0 M 12.8 M 12.6 M 0.700 0.99 0.99 97.14 55 1.02 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ab69176-39bb-425f-9c5d-10af28879770/@@download/cross_correlation_plot/ENCFF001HCM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB820QXD john-stamatoyannopoulos:DS13587-library ENCFF001HCM Illumina Genome Analyzer 2016-08-09T16:02:22.446296+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ81j0369F97Byg82v2pvg ENCSR000DRB https://www.encodeproject.org/experiments/ENCSR000DRB "transcription factor,RNA binding protein" CTCF-human GM12864 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF730ZVL https://www.encodeproject.org/files/ENCFF730ZVL/@@download/ENCFF730ZVL.bam ENCFF421ELO https://www.encodeproject.org/files/ENCFF421ELO/@@download/ENCFF421ELO.bam 14.9 M 0 13.3 M 0.891 SE 36 36 native 0.0 M 10.3 M 9.6 M 0.643 0.93 0.94 19.42 105 3.44 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6922638-d406-4f07-9bf1-813dee200af5/@@download/cross_correlation_plot/ENCFF001HBV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB887FIG john-stamatoyannopoulos:DS10988-library ENCFF001HBV Illumina Genome Analyzer II 2016-11-15T05:11:38.564917+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6p800369JV8BkgQ8xvykF ENCSR000DRB https://www.encodeproject.org/experiments/ENCSR000DRB "transcription factor,RNA binding protein" CTCF-human GM12864 immortalized cell line 3 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF225NQU https://www.encodeproject.org/files/ENCFF225NQU/@@download/ENCFF225NQU.bam ENCFF462NVK https://www.encodeproject.org/files/ENCFF462NVK/@@download/ENCFF462NVK.bam 21.2 M 0 19.6 M 0.925 SE 36 36 native 0.0 M 15.5 M 11.8 M 0.554 0.76 0.77 4.26 120 2.21 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/6337f42a-366a-4692-a898-76e304b866f9/@@download/cross_correlation_plot/ENCFF001HCB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB422TOP john-stamatoyannopoulos:DS14431-library ENCFF001HCB Illumina Genome Analyzer II 2016-11-15T05:11:48.427212+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6pgj0369FfP54JvFgv3b7 ENCSR000DQZ https://www.encodeproject.org/experiments/ENCSR000DQZ "histone,histone modification,narrow histone mark" H3K4me3-human GM12864 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF200SBP https://www.encodeproject.org/files/ENCFF200SBP/@@download/ENCFF200SBP.bam ENCFF829TOO https://www.encodeproject.org/files/ENCFF829TOO/@@download/ENCFF829TOO.bam 23.5 M 0 23.2 M 0.987 SE 36 36 None 0.0 M 19.8 M 17.3 M 0.735 0.87 0.88 8.67 200 1.94 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1903699-a095-404e-b77b-1989bb8801ee/@@download/cross_correlation_plot/ENCFF001EWC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB392PTS john-stamatoyannopoulos:DS18706-library ENCFF001EWC Illumina Genome Analyzer 2016-08-10T01:16:41.499992+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p4kj036927J18bVvf18Zq ENCSR000DQZ https://www.encodeproject.org/experiments/ENCSR000DQZ "histone,histone modification,narrow histone mark" H3K4me3-human GM12864 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF998EAB https://www.encodeproject.org/files/ENCFF998EAB/@@download/ENCFF998EAB.bam ENCFF888CNK https://www.encodeproject.org/files/ENCFF888CNK/@@download/ENCFF888CNK.bam 42.9 M 0 28.4 M 0.661 SE 36 36 None 0.0 M 22.9 M 19.2 M 0.447 0.84 0.86 8.02 135 2.22 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/8866dd0e-d78f-43c9-bbc7-8b6d7c9e73ea/@@download/cross_correlation_plot/ENCFF001EVK-ENCFF001EVJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB429YAL john-stamatoyannopoulos:DS18900-library "ENCFF001EVK,ENCFF001EVJ" Illumina Genome Analyzer 2016-08-10T01:17:15.895793+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p4x0036927J18bVvf18b3 ENCSR000DRD https://www.encodeproject.org/experiments/ENCSR000DRD control Control-human GM12865 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF801BOV https://www.encodeproject.org/files/ENCFF801BOV/@@download/ENCFF801BOV.bam ENCFF075MWT https://www.encodeproject.org/files/ENCFF075MWT/@@download/ENCFF075MWT.bam 18.4 M 0 18.0 M 0.977 SE 36 36 native 0.0 M 13.0 M 12.9 M 0.701 0.99 0.99 137.17 70 1.02 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7d8b820-d435-41f1-bfa6-ff7110748b77/@@download/cross_correlation_plot/ENCFF001HDF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB893SBP john-stamatoyannopoulos:DS13590-library ENCFF001HDF Illumina Genome Analyzer 2016-08-09T16:02:33.292666+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ84803696GPBjjv2bkQz7 ENCSR000DRE https://www.encodeproject.org/experiments/ENCSR000DRE "transcription factor,RNA binding protein" CTCF-human GM12865 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF383IOB https://www.encodeproject.org/files/ENCFF383IOB/@@download/ENCFF383IOB.bam ENCFF538WFV https://www.encodeproject.org/files/ENCFF538WFV/@@download/ENCFF538WFV.bam 12.5 M 0 11.2 M 0.893 SE 36 36 native 0.0 M 8.8 M 8.1 M 0.648 0.93 0.94 18.71 100 4.31 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/d67d7d57-c53a-4f62-a3ae-cae6af72f433/@@download/cross_correlation_plot/ENCFF001HCR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB731XKT john-stamatoyannopoulos:DS10991-library ENCFF001HCR Illumina Genome Analyzer II 2016-11-15T05:11:50.550918+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6kf80369JbJXk4G78JP1k ENCSR000DRE https://www.encodeproject.org/experiments/ENCSR000DRE "transcription factor,RNA binding protein" CTCF-human GM12865 immortalized cell line 3 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF655BNX https://www.encodeproject.org/files/ENCFF655BNX/@@download/ENCFF655BNX.bam ENCFF694NDZ https://www.encodeproject.org/files/ENCFF694NDZ/@@download/ENCFF694NDZ.bam 18.6 M 0 18.0 M 0.969 SE 36 36 native 0.0 M 13.9 M 13.6 M 0.728 0.97 0.97 44.66 105 1.69 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/27df6e3c-072f-4625-a6a9-c13ff5e8734e/@@download/cross_correlation_plot/ENCFF001HCS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB590VKG john-stamatoyannopoulos:DS13756-library ENCFF001HCS Illumina Genome Analyzer II 2016-11-15T05:11:54.164183+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6p080369PyvFZjj61GP81 ENCSR000DRC https://www.encodeproject.org/experiments/ENCSR000DRC "histone,histone modification,narrow histone mark" H3K4me3-human GM12865 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF534GZR https://www.encodeproject.org/files/ENCFF534GZR/@@download/ENCFF534GZR.bam ENCFF636XMF https://www.encodeproject.org/files/ENCFF636XMF/@@download/ENCFF636XMF.bam 18.5 M 0 18.2 M 0.985 SE 36 36 None 0.0 M 15.5 M 14.3 M 0.771 0.92 0.92 13.68 185 1.89 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/9375e3d5-471b-4ab8-9561-01085750bf19/@@download/cross_correlation_plot/ENCFF001EWN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB611RPH john-stamatoyannopoulos:DS18707-library ENCFF001EWN Illumina Genome Analyzer 2016-08-10T01:16:06.838258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5480369PxgkxQJvqfQxz ENCSR000DRC https://www.encodeproject.org/experiments/ENCSR000DRC "histone,histone modification,narrow histone mark" H3K4me3-human GM12865 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF057BMS https://www.encodeproject.org/files/ENCFF057BMS/@@download/ENCFF057BMS.bam ENCFF017ETQ https://www.encodeproject.org/files/ENCFF017ETQ/@@download/ENCFF017ETQ.bam 53.5 M 0 36.8 M 0.687 SE 36 36 None 0.0 M 30.1 M 25.2 M 0.471 0.84 0.85 7.00 160 1.69 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/de9cb4ed-a330-422e-845c-a3f2c13c2074/@@download/cross_correlation_plot/ENCFF001EWA-ENCFF001EVZ-ENCFF001EVY-ENCFF001EVX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB854DPR john-stamatoyannopoulos:DS20810-library "ENCFF001EVY,ENCFF001EWA,ENCFF001EVX,ENCFF001EVZ" Illumina Genome Analyzer 2016-08-10T01:17:06.506016+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p56803697yXkpZbvqpJ02 ENCSR000DRF https://www.encodeproject.org/experiments/ENCSR000DRF "transcription factor,RNA binding protein" CTCF-human GM12866 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF872QZA https://www.encodeproject.org/files/ENCFF872QZA/@@download/ENCFF872QZA.bam ENCFF495WEC https://www.encodeproject.org/files/ENCFF495WEC/@@download/ENCFF495WEC.bam 13.3 M 0 11.6 M 0.876 SE 36 36 native 0.0 M 9.0 M 8.3 M 0.626 0.92 0.94 19.43 110 3.23 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/be1e15e7-a4d8-4f79-9c15-93f7e541ff85/@@download/cross_correlation_plot/ENCFF001HDG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB311RQL john-stamatoyannopoulos:DS10994-library ENCFF001HDG Illumina Genome Analyzer 2016-12-11T03:49:00.911010+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164z7003695F8Bk64ff0744 ENCSR000DRF https://www.encodeproject.org/experiments/ENCSR000DRF "transcription factor,RNA binding protein" CTCF-human GM12866 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF475QQN https://www.encodeproject.org/files/ENCFF475QQN/@@download/ENCFF475QQN.bam ENCFF008GCU https://www.encodeproject.org/files/ENCFF008GCU/@@download/ENCFF008GCU.bam 14.4 M 0 10.5 M 0.730 SE 36 36 native 0.0 M 7.8 M 4.5 M 0.309 0.58 0.55 2.02 90 1.94 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/e813a5ce-4f71-4b8d-aea8-b90e243e8547/@@download/cross_correlation_plot/ENCFF001HDE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB683ABJ john-stamatoyannopoulos:DS11802-library ENCFF001HDE Illumina Genome Analyzer 2016-12-11T03:42:37.973927+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164zFQ0369BgG8x1ygv1X98 ENCSR000DRG https://www.encodeproject.org/experiments/ENCSR000DRG "histone,histone modification,narrow histone mark" H3K4me3-human GM12866 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF352PEA https://www.encodeproject.org/files/ENCFF352PEA/@@download/ENCFF352PEA.bam ENCFF645GLG https://www.encodeproject.org/files/ENCFF645GLG/@@download/ENCFF645GLG.bam 45.0 M 0 28.6 M 0.637 SE 36 36 native 0.0 M 23.1 M 20.2 M 0.448 0.87 0.88 9.74 150 1.99 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2b36624-5155-400f-acbf-3eab9c130b92/@@download/cross_correlation_plot/ENCFF001EWL-ENCFF001EWK_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB460CNO john-stamatoyannopoulos:DS18912-library "ENCFF001EWL,ENCFF001EWK" Illumina Genome Analyzer 2016-08-12T15:05:55.958846+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byff0Vj0369B9QkbxQ8BJbbQ ENCSR000DRH https://www.encodeproject.org/experiments/ENCSR000DRH "transcription factor,RNA binding protein" CTCF-human GM12867 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF864RMP https://www.encodeproject.org/files/ENCFF864RMP/@@download/ENCFF864RMP.bam ENCFF032QBF https://www.encodeproject.org/files/ENCFF032QBF/@@download/ENCFF032QBF.bam 14.9 M 0 13.0 M 0.878 SE 36 36 native 0.0 M 10.0 M 9.4 M 0.634 0.95 0.95 24.81 105 3.00 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa21d3de-e1bd-47cd-9ae1-48b89dc2b8a9/@@download/cross_correlation_plot/ENCFF001HDV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB041MJA john-stamatoyannopoulos:DS10995-library ENCFF001HDV Illumina Genome Analyzer 2016-12-10T17:44:39.348591+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162QJj03697K4B1J71pxzVX ENCSR000DRH https://www.encodeproject.org/experiments/ENCSR000DRH "transcription factor,RNA binding protein" CTCF-human GM12867 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF191QGT https://www.encodeproject.org/files/ENCFF191QGT/@@download/ENCFF191QGT.bam ENCFF374HLW https://www.encodeproject.org/files/ENCFF374HLW/@@download/ENCFF374HLW.bam 16.9 M 0 14.4 M 0.853 SE 36 36 native 0.0 M 10.5 M 8.4 M 0.496 0.80 0.79 4.62 95 1.47 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/28f95a00-2b44-4fef-a62c-afa92a37a949/@@download/cross_correlation_plot/ENCFF001HDU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB334UQS john-stamatoyannopoulos:DS11803-library ENCFF001HDU Illumina Genome Analyzer 2016-12-10T17:54:23.521615+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162QX80369PvYp91zK1Px4K ENCSR000DRI https://www.encodeproject.org/experiments/ENCSR000DRI "transcription factor,RNA binding protein" CTCF-human GM12868 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF885FNR https://www.encodeproject.org/files/ENCFF885FNR/@@download/ENCFF885FNR.bam ENCFF585XUL https://www.encodeproject.org/files/ENCFF585XUL/@@download/ENCFF585XUL.bam 15.1 M 0 12.9 M 0.854 SE 36 36 native 0.0 M 10.0 M 9.3 M 0.618 0.93 0.94 20.16 110 3.49 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/8827a2b6-d1f9-4989-beda-dbf683ceb135/@@download/cross_correlation_plot/ENCFF001HEC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB838IFI john-stamatoyannopoulos:DS10996-library ENCFF001HEC Illumina Genome Analyzer 2016-12-10T22:12:48.385841+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163XK803692pJ09J76g5g0v ENCSR000DRI https://www.encodeproject.org/experiments/ENCSR000DRI "transcription factor,RNA binding protein" CTCF-human GM12868 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF770DAM https://www.encodeproject.org/files/ENCFF770DAM/@@download/ENCFF770DAM.bam ENCFF325QOJ https://www.encodeproject.org/files/ENCFF325QOJ/@@download/ENCFF325QOJ.bam 16.4 M 0 14.7 M 0.898 SE 36 36 native 0.0 M 10.9 M 7.8 M 0.476 0.72 0.70 3.19 115 1.55 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/b2099f34-2ffb-4ac1-8138-8d1accd372c1/@@download/cross_correlation_plot/ENCFF001HEG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB755DWI john-stamatoyannopoulos:DS11804-library ENCFF001HEG Illumina Genome Analyzer 2016-12-10T22:22:40.039827+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163XY80369BV55708G9qbPX ENCSR000DRJ https://www.encodeproject.org/experiments/ENCSR000DRJ "transcription factor,RNA binding protein" CTCF-human GM12869 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF587LJV https://www.encodeproject.org/files/ENCFF587LJV/@@download/ENCFF587LJV.bam ENCFF556KYH https://www.encodeproject.org/files/ENCFF556KYH/@@download/ENCFF556KYH.bam 15.3 M 0 13.1 M 0.862 SE 36 36 native 0.0 M 10.1 M 9.5 M 0.622 0.94 0.95 22.00 105 3.21 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c10a08d-a68e-4e52-a11d-ffe4d3e2a294/@@download/cross_correlation_plot/ENCFF001HEP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB620KIS john-stamatoyannopoulos:DS10997-library ENCFF001HEP Illumina Genome Analyzer 2016-12-10T20:19:37.791044+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Zp00369Bxb30J6x5bZ13 ENCSR000DRJ https://www.encodeproject.org/experiments/ENCSR000DRJ "transcription factor,RNA binding protein" CTCF-human GM12869 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF430FMS https://www.encodeproject.org/files/ENCFF430FMS/@@download/ENCFF430FMS.bam ENCFF249RRS https://www.encodeproject.org/files/ENCFF249RRS/@@download/ENCFF249RRS.bam 16.1 M 0 10.7 M 0.668 SE 36 36 native 0.0 M 7.9 M 5.4 M 0.334 0.68 0.66 2.71 95 2.04 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/04461134-ab17-4bfe-bd9a-b7b1d875832d/@@download/cross_correlation_plot/ENCFF001HEO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB792ORF john-stamatoyannopoulos:DS11898-library ENCFF001HEO Illumina Genome Analyzer 2016-12-10T20:19:08.593594+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Zzj03697vfpg2qKbyZ6y ENCSR000DRK https://www.encodeproject.org/experiments/ENCSR000DRK "transcription factor,RNA binding protein" CTCF-human GM12870 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF379WNF https://www.encodeproject.org/files/ENCFF379WNF/@@download/ENCFF379WNF.bam ENCFF439DMH https://www.encodeproject.org/files/ENCFF439DMH/@@download/ENCFF439DMH.bam 14.4 M 0 12.1 M 0.843 SE 36 36 native 0.0 M 9.2 M 8.8 M 0.612 0.95 0.96 26.39 110 2.86 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa128db2-9ed6-4a01-8c71-03c961635c52/@@download/cross_correlation_plot/ENCFF001HEQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB149CAB john-stamatoyannopoulos:DS10998-library ENCFF001HEQ Illumina Genome Analyzer 2016-12-11T02:26:51.546372+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1641JQ03697K4B1J71pxzyY ENCSR000DRK https://www.encodeproject.org/experiments/ENCSR000DRK "transcription factor,RNA binding protein" CTCF-human GM12870 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF021JLB https://www.encodeproject.org/files/ENCFF021JLB/@@download/ENCFF021JLB.bam ENCFF707NJA https://www.encodeproject.org/files/ENCFF707NJA/@@download/ENCFF707NJA.bam 6.8 M 0 2.8 M 0.411 SE 36 36 native 0.0 M 2.1 M 2.0 M 0.297 0.97 0.97 36.74 110 3.45 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd212996-84c7-48cc-862a-6dd21fc35be6/@@download/cross_correlation_plot/ENCFF001HFA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB709RYH john-stamatoyannopoulos:DS10729-library ENCFF001HFA Illumina Genome Analyzer 2016-12-11T02:11:43.873384+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1641Xj03697xKX68qyy2kK4 ENCSR000DRL https://www.encodeproject.org/experiments/ENCSR000DRL "transcription factor,RNA binding protein" CTCF-human GM12871 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF266QAE https://www.encodeproject.org/files/ENCFF266QAE/@@download/ENCFF266QAE.bam ENCFF116TRU https://www.encodeproject.org/files/ENCFF116TRU/@@download/ENCFF116TRU.bam 15.5 M 0 13.4 M 0.868 SE 36 36 native 0.0 M 10.3 M 9.7 M 0.629 0.95 0.95 24.94 105 2.78 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/169a6cec-f064-4d85-b3da-d997d6a61733/@@download/cross_correlation_plot/ENCFF001HFH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB422RLW john-stamatoyannopoulos:DS10999-library ENCFF001HFH Illumina Genome Analyzer 2016-12-11T02:30:17.481141+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1641j80369PvYp91zK1Px7p ENCSR000DRL https://www.encodeproject.org/experiments/ENCSR000DRL "transcription factor,RNA binding protein" CTCF-human GM12871 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF742BGH https://www.encodeproject.org/files/ENCFF742BGH/@@download/ENCFF742BGH.bam ENCFF600CCQ https://www.encodeproject.org/files/ENCFF600CCQ/@@download/ENCFF600CCQ.bam 16.9 M 0 15.6 M 0.923 SE 36 36 native 0.0 M 12.1 M 8.0 M 0.475 0.67 0.66 2.81 100 3.59 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/aaedeea9-aeec-4bbb-b89c-674664cedd37/@@download/cross_correlation_plot/ENCFF001HFM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB133POS john-stamatoyannopoulos:DS11504-library ENCFF001HFM Illumina Genome Analyzer 2016-12-11T02:29:56.235044+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1641x00369Bxb30J6x5bZB9 ENCSR000DRM https://www.encodeproject.org/experiments/ENCSR000DRM control Control-human GM12872 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF174FWY https://www.encodeproject.org/files/ENCFF174FWY/@@download/ENCFF174FWY.bam ENCFF699AGI https://www.encodeproject.org/files/ENCFF699AGI/@@download/ENCFF699AGI.bam 17.0 M 0 16.6 M 0.977 SE 36 36 native 0.0 M 12.0 M 11.9 M 0.700 0.99 0.99 127.94 55 1.02 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fb1f06e-a06e-4eee-8743-c06279183a4b/@@download/cross_correlation_plot/ENCFF001HGF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB760FVE john-stamatoyannopoulos:DS13585-library ENCFF001HGF Illumina Genome Analyzer II 2016-10-26T17:41:15.925670+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Fzj0369PQyG3V5B44Q5K ENCSR000DRN https://www.encodeproject.org/experiments/ENCSR000DRN "transcription factor,RNA binding protein" CTCF-human GM12872 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF505LKJ https://www.encodeproject.org/files/ENCFF505LKJ/@@download/ENCFF505LKJ.bam ENCFF255CHZ https://www.encodeproject.org/files/ENCFF255CHZ/@@download/ENCFF255CHZ.bam 14.5 M 0 13.0 M 0.898 SE 36 36 native 0.0 M 10.0 M 9.4 M 0.651 0.94 0.95 21.88 105 3.23 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/e649438e-b4bb-4728-a98f-25dfc4005e36/@@download/cross_correlation_plot/ENCFF001HFQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB364AJF john-stamatoyannopoulos:DS10989-library ENCFF001HFQ Illumina Genome Analyzer II 2016-12-12T17:17:19.654279+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1623J803697vfpg2qKbyZ4F ENCSR000DRN https://www.encodeproject.org/experiments/ENCSR000DRN "transcription factor,RNA binding protein" CTCF-human GM12872 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF208WRC https://www.encodeproject.org/files/ENCFF208WRC/@@download/ENCFF208WRC.bam ENCFF943YCX https://www.encodeproject.org/files/ENCFF943YCX/@@download/ENCFF943YCX.bam 17.0 M 0 16.4 M 0.966 SE 36 36 native 0.0 M 12.3 M 9.3 M 0.546 0.75 0.75 3.78 125 1.80 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/94c78f23-d3b1-49b1-a947-d7a7e6e23784/@@download/cross_correlation_plot/ENCFF001HFU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB024MKR john-stamatoyannopoulos:DS11500-library ENCFF001HFU Illumina Genome Analyzer II 2016-12-12T17:17:27.704032+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1623X003697K4B1J71pxzKB ENCSR000DRN https://www.encodeproject.org/experiments/ENCSR000DRN "transcription factor,RNA binding protein" CTCF-human GM12872 immortalized cell line 3 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF246CXG https://www.encodeproject.org/files/ENCFF246CXG/@@download/ENCFF246CXG.bam ENCFF562DKR https://www.encodeproject.org/files/ENCFF562DKR/@@download/ENCFF562DKR.bam 25.2 M 0 23.3 M 0.924 SE 36 36 native 0.0 M 18.4 M 14.6 M 0.580 0.80 0.81 5.38 120 2.32 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/da8477c2-4bb1-46fb-a96a-4601588611a8/@@download/cross_correlation_plot/ENCFF001HFT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB680KAC john-stamatoyannopoulos:DS14432-library ENCFF001HFT Illumina Genome Analyzer II 2016-12-12T17:17:39.049483+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1623fQ0369Bxb30J6x5bYxB ENCSR000DRO https://www.encodeproject.org/experiments/ENCSR000DRO control Control-human GM12873 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF627CIM https://www.encodeproject.org/files/ENCFF627CIM/@@download/ENCFF627CIM.bam ENCFF636QUY https://www.encodeproject.org/files/ENCFF636QUY/@@download/ENCFF636QUY.bam 18.7 M 0 18.3 M 0.980 SE 36 36 native 0.0 M 13.3 M 13.0 M 0.695 0.97 0.98 97.90 50 1.02 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9be966c-087f-4f28-90d4-af7d8fde69c9/@@download/cross_correlation_plot/ENCFF001HGV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB240PEF john-stamatoyannopoulos:DS13586-library ENCFF001HGV Illumina Genome Analyzer II 2016-10-26T17:35:56.220408+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082YXj0369668063VP6b2px ENCSR000DRP https://www.encodeproject.org/experiments/ENCSR000DRP "transcription factor,RNA binding protein" CTCF-human GM12873 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF636PUW https://www.encodeproject.org/files/ENCFF636PUW/@@download/ENCFF636PUW.bam ENCFF122ARC https://www.encodeproject.org/files/ENCFF122ARC/@@download/ENCFF122ARC.bam 14.4 M 0 13.1 M 0.907 SE 36 36 native 0.0 M 10.3 M 9.3 M 0.642 0.90 0.92 15.56 105 3.90 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d2e300d-5bab-4d0b-a54d-98fcfaa8e6b1/@@download/cross_correlation_plot/ENCFF001HGI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB241QDX john-stamatoyannopoulos:DS10990-library ENCFF001HGI Illumina Genome Analyzer II 2016-12-11T04:48:34.175545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16698003695zJkyP3F892Xp ENCSR000DRP https://www.encodeproject.org/experiments/ENCSR000DRP "transcription factor,RNA binding protein" CTCF-human GM12873 immortalized cell line 3 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF877MTF https://www.encodeproject.org/files/ENCFF877MTF/@@download/ENCFF877MTF.bam ENCFF481AGA https://www.encodeproject.org/files/ENCFF481AGA/@@download/ENCFF481AGA.bam 25.3 M 0 23.4 M 0.926 SE 36 36 native 0.0 M 18.9 M 14.4 M 0.571 0.77 0.80 5.70 115 2.99 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/76b2d32a-6183-4437-b42f-e72dbda8822a/@@download/cross_correlation_plot/ENCFF001HGK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB915VMM john-stamatoyannopoulos:DS14433-library ENCFF001HGK Illumina Genome Analyzer II 2016-12-11T04:57:43.350994+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1669Yj0369GF0YB1zjPf76q ENCSR000DRQ https://www.encodeproject.org/experiments/ENCSR000DRQ control Control-human GM12874 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF412FKY https://www.encodeproject.org/files/ENCFF412FKY/@@download/ENCFF412FKY.bam ENCFF141UTG https://www.encodeproject.org/files/ENCFF141UTG/@@download/ENCFF141UTG.bam 17.9 M 0 17.5 M 0.979 SE 36 36 native 0.0 M 12.7 M 12.6 M 0.704 0.99 0.99 140.50 75 1.02 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/6feead4a-d820-4ff8-9b7b-bf9509e3d2bf/@@download/cross_correlation_plot/ENCFF001HHJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB142XQL john-stamatoyannopoulos:DS13588-library ENCFF001HHJ Illumina Genome Analyzer II 2016-10-26T17:44:02.009377+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08202003699pQzk2JB6K7k4 ENCSR000DRR https://www.encodeproject.org/experiments/ENCSR000DRR "transcription factor,RNA binding protein" CTCF-human GM12874 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF664MCF https://www.encodeproject.org/files/ENCFF664MCF/@@download/ENCFF664MCF.bam ENCFF662NUJ https://www.encodeproject.org/files/ENCFF662NUJ/@@download/ENCFF662NUJ.bam 14.8 M 0 13.4 M 0.906 SE 36 36 native 0.0 M 10.4 M 5.7 M 0.384 0.55 0.52 1.92 110 4.06 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d26a468-744d-4a13-a83f-64b7bee5e74c/@@download/cross_correlation_plot/ENCFF001HGY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB356KOC john-stamatoyannopoulos:DS11503-library ENCFF001HGY Illumina Genome Analyzer II 2016-12-10T21:52:09.221581+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163QpQ03699Z3Y8493qbpvx ENCSR000DRR https://www.encodeproject.org/experiments/ENCSR000DRR "transcription factor,RNA binding protein" CTCF-human GM12874 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF567AIN https://www.encodeproject.org/files/ENCFF567AIN/@@download/ENCFF567AIN.bam ENCFF052TOP https://www.encodeproject.org/files/ENCFF052TOP/@@download/ENCFF052TOP.bam 15.1 M 0 13.4 M 0.889 SE 36 36 native 0.0 M 10.4 M 9.7 M 0.643 0.93 0.94 20.46 110 3.32 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/570b22f3-df74-4888-803d-8b718bbb0c20/@@download/cross_correlation_plot/ENCFF001HHG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB341CVN john-stamatoyannopoulos:DS10992-library ENCFF001HHG Illumina Genome Analyzer II 2016-12-10T22:11:57.023330+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163QzQ0369Bxb30J6x5bZ79 ENCSR000DRT https://www.encodeproject.org/experiments/ENCSR000DRT control Control-human GM12875 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF490MFW https://www.encodeproject.org/files/ENCFF490MFW/@@download/ENCFF490MFW.bam ENCFF335FVF https://www.encodeproject.org/files/ENCFF335FVF/@@download/ENCFF335FVF.bam 17.1 M 0 16.8 M 0.984 SE 36 36 native 0.0 M 12.4 M 12.3 M 0.722 1.00 1.00 330.11 55 1.02 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f891a35-34de-4606-8f88-a212a8dd9a8e/@@download/cross_correlation_plot/ENCFF001HHU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB643GHD john-stamatoyannopoulos:DS13589-library ENCFF001HHU Illumina Genome Analyzer 2016-08-09T16:01:58.096157+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ86j0369BB4PPpG2jBj2K ENCSR000DRU https://www.encodeproject.org/experiments/ENCSR000DRU "transcription factor,RNA binding protein" CTCF-human GM12875 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF908YKV https://www.encodeproject.org/files/ENCFF908YKV/@@download/ENCFF908YKV.bam ENCFF238QDB https://www.encodeproject.org/files/ENCFF238QDB/@@download/ENCFF238QDB.bam 15.2 M 0 13.7 M 0.902 SE 36 36 native 0.0 M 10.6 M 9.9 M 0.651 0.93 0.94 19.89 110 3.36 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f67ecd7-a244-442a-abec-3d4a1c195dbc/@@download/cross_correlation_plot/ENCFF001HHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB720FZY john-stamatoyannopoulos:DS10993-library ENCFF001HHM Illumina Genome Analyzer II 2016-11-15T05:11:46.149321+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6jp80369PyvFZjj61GP78 ENCSR000DRU https://www.encodeproject.org/experiments/ENCSR000DRU "transcription factor,RNA binding protein" CTCF-human GM12875 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF517CVH https://www.encodeproject.org/files/ENCFF517CVH/@@download/ENCFF517CVH.bam ENCFF510URR https://www.encodeproject.org/files/ENCFF510URR/@@download/ENCFF510URR.bam 14.6 M 0 10.9 M 0.741 SE 36 36 native 0.0 M 8.0 M 5.9 M 0.405 0.74 0.73 3.51 100 2.37 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4a3def0-5def-4faa-b6a9-addf880f6a26/@@download/cross_correlation_plot/ENCFF001HHL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB963RNJ john-stamatoyannopoulos:DS11899-library ENCFF001HHL Illumina Genome Analyzer II 2016-11-15T05:12:05.767956+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6k50036935XbqQ06p9f24 ENCSR000DRS https://www.encodeproject.org/experiments/ENCSR000DRS "histone,histone modification,narrow histone mark" H3K4me3-human GM12875 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF425NYG https://www.encodeproject.org/files/ENCFF425NYG/@@download/ENCFF425NYG.bam ENCFF023SXH https://www.encodeproject.org/files/ENCFF023SXH/@@download/ENCFF023SXH.bam 33.7 M 0 17.6 M 0.523 SE 36 36 native 0.0 M 14.2 M 13.0 M 0.387 0.92 0.92 14.08 155 2.13 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/caedcbfa-2973-44f2-9071-64b11f5ef6c6/@@download/cross_correlation_plot/ENCFF001EWR-ENCFF001EWQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB011WPD john-stamatoyannopoulos:DS18910-library "ENCFF001EWR,ENCFF001EWQ" Illumina Genome Analyzer 2016-08-20T04:10:12.357552+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byqp8y8036968qzv81pPKQgj ENCSR000DRV https://www.encodeproject.org/experiments/ENCSR000DRV control Control-human GM12878 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF094HMB https://www.encodeproject.org/files/ENCFF094HMB/@@download/ENCFF094HMB.bam ENCFF504ALV https://www.encodeproject.org/files/ENCFF504ALV/@@download/ENCFF504ALV.bam 17.0 M 0 16.6 M 0.974 SE 36 36 native 0.0 M 12.1 M 11.7 M 0.688 0.97 0.97 33.83 115 1.03 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/17ff3d98-3d57-4e99-8722-86024719dcdf/@@download/cross_correlation_plot/ENCFF001HID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB127RDQ john-stamatoyannopoulos:DS11883-library ENCFF001HID Illumina Genome Analyzer 2016-08-09T16:02:06.545787+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ8980369FGGBGjG2qk14q ENCSR000DRZ https://www.encodeproject.org/experiments/ENCSR000DRZ "transcription factor,RNA binding protein" CTCF-human GM12878 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF612FTS https://www.encodeproject.org/files/ENCFF612FTS/@@download/ENCFF612FTS.bam ENCFF913XVH https://www.encodeproject.org/files/ENCFF913XVH/@@download/ENCFF913XVH.bam 14.3 M 0 8.7 M 0.607 SE 36 36 native 0.0 M 6.7 M 4.3 M 0.298 0.64 0.61 2.30 130 3.18 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff610f8b-7b58-45fe-ae82-c98789a0d86f/@@download/cross_correlation_plot/ENCFF001HHX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB667MZC john-stamatoyannopoulos:DS11510-library ENCFF001HHX Illumina Genome Analyzer II 2016-12-12T17:17:05.578488+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1622k803692pJ09J76g5fbG ENCSR000DRZ https://www.encodeproject.org/experiments/ENCSR000DRZ "transcription factor,RNA binding protein" CTCF-human GM12878 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF614VZE https://www.encodeproject.org/files/ENCFF614VZE/@@download/ENCFF614VZE.bam ENCFF629BGK https://www.encodeproject.org/files/ENCFF629BGK/@@download/ENCFF629BGK.bam 31.5 M 0 19.2 M 0.610 SE 36 36 native 0.0 M 14.8 M 13.8 M 0.439 0.93 0.95 22.17 95 2.52 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a31e197-86ad-4502-b722-824887e84daf/@@download/cross_correlation_plot/ENCFF001HIA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB638PNX john-stamatoyannopoulos:DS11165-library ENCFF001HIA Illumina Genome Analyzer II 2016-12-12T17:17:56.682681+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1622xj03690xXYVJ7Fj2bk5 ENCSR000DRX https://www.encodeproject.org/experiments/ENCSR000DRX "histone,histone modification,broad histone mark" H3K27me3-human GM12878 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF927XRX https://www.encodeproject.org/files/ENCFF927XRX/@@download/ENCFF927XRX.bam ENCFF701WEO https://www.encodeproject.org/files/ENCFF701WEO/@@download/ENCFF701WEO.bam 14.5 M 0 13.7 M 0.946 SE 36 36 native 0.0 M 10.3 M 10.1 M 0.698 0.98 0.98 58.56 120 1.05 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca3fdb88-5732-4a82-8c47-df2b2bddefed/@@download/cross_correlation_plot/ENCFF001EXM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB478FPQ john-stamatoyannopoulos:DS12182-library ENCFF001EXM Illumina Genome Analyzer 2016-10-26T17:42:49.794869+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829x003697KPkyX9BPPq48 ENCSR000DRX https://www.encodeproject.org/experiments/ENCSR000DRX "histone,histone modification,broad histone mark" H3K27me3-human GM12878 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF796DDM https://www.encodeproject.org/files/ENCFF796DDM/@@download/ENCFF796DDM.bam ENCFF858SMQ https://www.encodeproject.org/files/ENCFF858SMQ/@@download/ENCFF858SMQ.bam 19.1 M 0 18.5 M 0.968 SE 36 36 native 0.0 M 14.1 M 13.8 M 0.723 0.98 0.98 45.24 125 1.04 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/852bd9b5-1984-4021-86cd-f3659fac2893/@@download/cross_correlation_plot/ENCFF001EXO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB354VGM john-stamatoyannopoulos:DS12185-library ENCFF001EXO Illumina Genome Analyzer 2016-10-26T17:42:21.921394+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082B2Q036923z1QYVBPkq7J ENCSR000DRW https://www.encodeproject.org/experiments/ENCSR000DRW "histone,histone modification,broad histone mark" H3K36me3-human GM12878 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF651KLD https://www.encodeproject.org/files/ENCFF651KLD/@@download/ENCFF651KLD.bam ENCFF504QVS https://www.encodeproject.org/files/ENCFF504QVS/@@download/ENCFF504QVS.bam 17.7 M 0 17.2 M 0.973 SE 36 36 native 0.0 M 12.6 M 12.2 M 0.690 0.97 0.97 35.65 105 1.07 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4fdbe89-43df-40c5-8e97-abb082825095/@@download/cross_correlation_plot/ENCFF001EXY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB274NTD john-stamatoyannopoulos:DS12186-library ENCFF001EXY Illumina Genome Analyzer 2016-10-26T17:38:37.407626+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827J803697KPkyX9BPPq34 ENCSR000DRW https://www.encodeproject.org/experiments/ENCSR000DRW "histone,histone modification,broad histone mark" H3K36me3-human GM12878 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF906JEC https://www.encodeproject.org/files/ENCFF906JEC/@@download/ENCFF906JEC.bam ENCFF245CBD https://www.encodeproject.org/files/ENCFF245CBD/@@download/ENCFF245CBD.bam 17.8 M 0 17.3 M 0.972 SE 36 36 native 0.0 M 12.6 M 12.4 M 0.695 0.98 0.98 55.30 110 1.06 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/b427c52f-d63c-48ad-a825-988c88cb1d78/@@download/cross_correlation_plot/ENCFF001EXW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB461HSR john-stamatoyannopoulos:DS12183-library ENCFF001EXW Illumina Genome Analyzer 2016-10-26T17:38:07.957506+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827X80369PQyG3V5B44Q2Q ENCSR000DRY https://www.encodeproject.org/experiments/ENCSR000DRY "histone,histone modification,narrow histone mark" H3K4me3-human GM12878 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF147ZCK https://www.encodeproject.org/files/ENCFF147ZCK/@@download/ENCFF147ZCK.bam ENCFF589DPU https://www.encodeproject.org/files/ENCFF589DPU/@@download/ENCFF589DPU.bam 25.3 M 0 24.1 M 0.952 SE 36 36 None 0.0 M 19.9 M 17.4 M 0.689 0.87 0.88 8.92 135 1.83 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/eef39bfe-a769-406f-9e09-2798fad680a2/@@download/cross_correlation_plot/ENCFF001EYF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB830JNP john-stamatoyannopoulos:DS11513-library ENCFF001EYF Illumina Genome Analyzer 2016-08-10T01:14:07.507036+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBB80369JB9ykPvgzPPX3 ENCSR000DRY https://www.encodeproject.org/experiments/ENCSR000DRY "histone,histone modification,narrow histone mark" H3K4me3-human GM12878 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF822SQU https://www.encodeproject.org/files/ENCFF822SQU/@@download/ENCFF822SQU.bam ENCFF325SGZ https://www.encodeproject.org/files/ENCFF325SGZ/@@download/ENCFF325SGZ.bam 22.8 M 0 20.3 M 0.889 SE 36 36 None 0.0 M 16.4 M 14.6 M 0.638 0.89 0.89 9.80 140 1.96 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/d88fd7c2-8b55-4c5a-b601-25fd1f2d72f6/@@download/cross_correlation_plot/ENCFF001EYE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB662WFM john-stamatoyannopoulos:DS11511-library ENCFF001EYE Illumina Genome Analyzer 2016-08-10T01:14:17.570604+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBGQ0369JB9ykPvgzPPXF ENCSR000DSQ https://www.encodeproject.org/experiments/ENCSR000DSQ control Control-human H7-hESC stem cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF043XTH https://www.encodeproject.org/files/ENCFF043XTH/@@download/ENCFF043XTH.bam ENCFF837HRZ https://www.encodeproject.org/files/ENCFF837HRZ/@@download/ENCFF837HRZ.bam 18.4 M 0 18.1 M 0.985 SE 36 36 native 0.0 M 13.9 M 13.8 M 0.752 0.99 0.99 186.15 110 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/6a9cba02-15b9-40be-ab8a-49fd527b44d5/@@download/cross_correlation_plot/ENCFF001FFI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB270TGX john-stamatoyannopoulos:DS14109-library ENCFF001FFI Illumina Genome Analyzer 2016-08-09T16:02:05.273879+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ8f003691jjxffj2bKqQ8 ENCSR000DST https://www.encodeproject.org/experiments/ENCSR000DST "histone,histone modification,broad histone mark" H3K27me3-human H7-hESC stem cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF250WQM https://www.encodeproject.org/files/ENCFF250WQM/@@download/ENCFF250WQM.bam ENCFF292KRW https://www.encodeproject.org/files/ENCFF292KRW/@@download/ENCFF292KRW.bam 14.2 M 0 12.7 M 0.889 SE 36 36 native 0.0 M 10.2 M 9.4 M 0.659 0.92 0.93 14.30 145 1.15 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/65f33a09-4100-4326-be58-f843d643326b/@@download/cross_correlation_plot/ENCFF001FCJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB125VSI john-stamatoyannopoulos:DS13428-library ENCFF001FCJ Illumina Genome Analyzer 2016-10-26T17:38:36.372826+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082BZj03694VvqYvxK22vBF ENCSR000DST https://www.encodeproject.org/experiments/ENCSR000DST "histone,histone modification,broad histone mark" H3K27me3-human H7-hESC stem cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF421HFM https://www.encodeproject.org/files/ENCFF421HFM/@@download/ENCFF421HFM.bam ENCFF366PVY https://www.encodeproject.org/files/ENCFF366PVY/@@download/ENCFF366PVY.bam 26.0 M 0 22.3 M 0.860 SE 36 36 native 0.0 M 18.0 M 16.1 M 0.620 0.89 0.90 9.85 105 1.12 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa7aa682-3108-4277-a377-d4e68f202067/@@download/cross_correlation_plot/ENCFF001FCK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB641BPS john-stamatoyannopoulos:DS14113-library ENCFF001FCK Illumina Genome Analyzer 2016-10-26T17:38:35.045014+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Bk003692g2Q4k5K0j8zg ENCSR000DSS https://www.encodeproject.org/experiments/ENCSR000DSS "histone,histone modification,broad histone mark" H3K36me3-human H7-hESC stem cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF030NEU https://www.encodeproject.org/files/ENCFF030NEU/@@download/ENCFF030NEU.bam ENCFF041THS https://www.encodeproject.org/files/ENCFF041THS/@@download/ENCFF041THS.bam 20.9 M 0 18.7 M 0.897 SE 36 36 native 0.0 M 13.8 M 13.3 M 0.637 0.96 0.96 28.18 100 1.07 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/66fd2798-f650-4d81-be6d-498bb682aa13/@@download/cross_correlation_plot/ENCFF001FEG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB948IJH john-stamatoyannopoulos:DS14115-library ENCFF001FEG Illumina Genome Analyzer 2016-10-26T17:42:55.684894+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0825Vj03697KPkyX9BPPq1y ENCSR000DSS https://www.encodeproject.org/experiments/ENCSR000DSS "histone,histone modification,broad histone mark" H3K36me3-human H7-hESC stem cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF100KBH https://www.encodeproject.org/files/ENCFF100KBH/@@download/ENCFF100KBH.bam ENCFF680YQS https://www.encodeproject.org/files/ENCFF680YQS/@@download/ENCFF680YQS.bam 24.1 M 0 21.9 M 0.908 SE 36 36 native 0.0 M 16.7 M 16.1 M 0.669 0.96 0.97 28.83 75 1.05 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/8cf1a60a-25bc-4203-bc12-8851cc2add11/@@download/cross_correlation_plot/ENCFF001FEF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB234ABQ john-stamatoyannopoulos:DS14114-library ENCFF001FEF Illumina Genome Analyzer 2016-10-26T17:42:45.152784+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0825bj036923pJJqk9xzYjj ENCSR000DSR https://www.encodeproject.org/experiments/ENCSR000DSR "histone,histone modification,narrow histone mark" H3K4me3-human H7-hESC stem cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF223IFL https://www.encodeproject.org/files/ENCFF223IFL/@@download/ENCFF223IFL.bam ENCFF774ELG https://www.encodeproject.org/files/ENCFF774ELG/@@download/ENCFF774ELG.bam 14.4 M 0 12.4 M 0.866 SE 36 36 None 0.0 M 10.7 M 7.6 M 0.526 0.71 0.76 4.75 175 3.58 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cdf8656-16cd-4ce1-86d2-cf0835555ea2/@@download/cross_correlation_plot/ENCFF001FEM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB195WLU john-stamatoyannopoulos:DS13427-library ENCFF001FEM Illumina Genome Analyzer 2016-08-10T01:14:48.361355+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7BQ03697yXkpZbvqpJ1g ENCSR000DSR https://www.encodeproject.org/experiments/ENCSR000DSR "histone,histone modification,narrow histone mark" H3K4me3-human H7-hESC stem cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF037BRA https://www.encodeproject.org/files/ENCFF037BRA/@@download/ENCFF037BRA.bam ENCFF678LBQ https://www.encodeproject.org/files/ENCFF678LBQ/@@download/ENCFF678LBQ.bam 25.7 M 0 21.6 M 0.840 SE 36 36 None 0.0 M 18.2 M 12.8 M 0.499 0.71 0.73 4.01 135 3.15 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/7605e84f-f79b-4013-a9c5-323e97b2213c/@@download/cross_correlation_plot/ENCFF001FEP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB548HET john-stamatoyannopoulos:DS14112-library ENCFF001FEP Illumina Genome Analyzer 2016-08-10T01:14:45.870363+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7Gj0369585gqXkvzxFQ1 ENCSR000DTP https://www.encodeproject.org/experiments/ENCSR000DTP control Control-human HCT116 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF040CVQ https://www.encodeproject.org/files/ENCFF040CVQ/@@download/ENCFF040CVQ.bam ENCFF594FEE https://www.encodeproject.org/files/ENCFF594FEE/@@download/ENCFF594FEE.bam 25.5 M 0 25.0 M 0.982 SE 36 36 native 0.0 M 19.3 M 19.2 M 0.754 1.00 1.00 243.99 60 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8621206-418f-4b1e-9c49-faa41ff0b96c/@@download/cross_correlation_plot/ENCFF001HME.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB433LXL john-stamatoyannopoulos:DS16013-library ENCFF001HME Illumina Genome Analyzer 2016-08-09T16:02:12.205095+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9Bj0369J0Bzfkv2XyxPF ENCSR000DTO https://www.encodeproject.org/experiments/ENCSR000DTO "transcription factor,RNA binding protein" CTCF-human HCT116 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF091ODJ https://www.encodeproject.org/files/ENCFF091ODJ/@@download/ENCFF091ODJ.bam ENCFF946VIO https://www.encodeproject.org/files/ENCFF946VIO/@@download/ENCFF946VIO.bam 19.2 M 0 18.1 M 0.946 SE 36 36 native 0.0 M 14.3 M 13.6 M 0.709 0.95 0.95 24.04 130 2.19 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5fcc990-ea49-4785-8f24-dd7d809ed6d5/@@download/cross_correlation_plot/ENCFF001HLV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB725BIP john-stamatoyannopoulos:DS18710-library ENCFF001HLV Illumina Genome Analyzer 2016-12-10T18:00:33.594407+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Q3Q03695yqvv8q311Q5y ENCSR000DTO https://www.encodeproject.org/experiments/ENCSR000DTO "transcription factor,RNA binding protein" CTCF-human HCT116 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF648CAE https://www.encodeproject.org/files/ENCFF648CAE/@@download/ENCFF648CAE.bam ENCFF665GAO https://www.encodeproject.org/files/ENCFF665GAO/@@download/ENCFF665GAO.bam 18.5 M 0 15.8 M 0.856 SE 36 36 native 0.0 M 12.3 M 11.6 M 0.627 0.94 0.94 17.44 130 1.72 2.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/31788816-f68d-4b56-a9ce-5f0856da0c1e/@@download/cross_correlation_plot/ENCFF001HLW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB114ORS john-stamatoyannopoulos:DS18568-library ENCFF001HLW Illumina Genome Analyzer 2016-12-10T19:09:02.245025+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Q80036904pZZ8v3bkfy0 ENCSR000DTQ https://www.encodeproject.org/experiments/ENCSR000DTQ "histone,histone modification,narrow histone mark" H3K4me3-human HCT116 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF299YNE https://www.encodeproject.org/files/ENCFF299YNE/@@download/ENCFF299YNE.bam ENCFF428XDF https://www.encodeproject.org/files/ENCFF428XDF/@@download/ENCFF428XDF.bam 25.9 M 0 25.5 M 0.985 SE 36 36 None 0.0 M 21.8 M 18.1 M 0.700 0.83 0.85 7.23 155 2.48 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/19b0514f-743d-49d9-a0e1-d28a98c4e46a/@@download/cross_correlation_plot/ENCFF001FIS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB611VJE john-stamatoyannopoulos:DS16056-library ENCFF001FIS Illumina Genome Analyzer 2016-08-10T01:15:11.001489+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7z003697yXkpZbvqpJ2G ENCSR000DTQ https://www.encodeproject.org/experiments/ENCSR000DTQ "histone,histone modification,narrow histone mark" H3K4me3-human HCT116 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF945ZLK https://www.encodeproject.org/files/ENCFF945ZLK/@@download/ENCFF945ZLK.bam ENCFF691DSL https://www.encodeproject.org/files/ENCFF691DSL/@@download/ENCFF691DSL.bam 29.9 M 0 29.4 M 0.983 SE 36 36 None 0.0 M 24.7 M 20.9 M 0.698 0.85 0.86 8.25 145 2.31 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/93b7f601-3dbc-4e76-99a8-eac1a820fdaf/@@download/cross_correlation_plot/ENCFF001FIZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB112ZPY john-stamatoyannopoulos:DS16055-library ENCFF001FIZ Illumina Genome Analyzer 2016-08-10T01:15:02.194291+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p81j03695b8XJVxvzFzg2 ENCSR000DTV https://www.encodeproject.org/experiments/ENCSR000DTV control Control-human HEK293 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF846BEG https://www.encodeproject.org/files/ENCFF846BEG/@@download/ENCFF846BEG.bam ENCFF854RYT https://www.encodeproject.org/files/ENCFF854RYT/@@download/ENCFF854RYT.bam 17.6 M 0 15.9 M 0.904 SE 36 36 native 0.0 M 11.6 M 11.5 M 0.653 0.99 0.99 78.04 135 1.03 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/16264803-53e1-46dc-9447-936de3933a9e/@@download/cross_correlation_plot/ENCFF001HNC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB815WEH john-stamatoyannopoulos:DS13603-library ENCFF001HNC Illumina Genome Analyzer 2016-08-09T16:03:24.889930+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9Pj0369BB4PPpG2jBj37 ENCSR000DTW https://www.encodeproject.org/experiments/ENCSR000DTW "transcription factor,RNA binding protein" CTCF-human HEK293 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF594YMC https://www.encodeproject.org/files/ENCFF594YMC/@@download/ENCFF594YMC.bam ENCFF609RNL https://www.encodeproject.org/files/ENCFF609RNL/@@download/ENCFF609RNL.bam 60.7 M 0 17.5 M 0.288 SE 36 36 native 0.0 M 13.4 M 10.4 M 0.171 0.78 0.82 6.61 110 4.38 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/f69e4f3f-607b-448b-8e4f-fe2de68115a9/@@download/cross_correlation_plot/ENCFF001HNG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB963PNN john-stamatoyannopoulos:DS10699-library ENCFF001HNG Illumina Genome Analyzer II 2016-12-11T01:58:15.623448+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163bgj0369BV55708G9qbQ1 ENCSR000DTW https://www.encodeproject.org/experiments/ENCSR000DTW "transcription factor,RNA binding protein" CTCF-human HEK293 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF018VMV https://www.encodeproject.org/files/ENCFF018VMV/@@download/ENCFF018VMV.bam ENCFF195GIP https://www.encodeproject.org/files/ENCFF195GIP/@@download/ENCFF195GIP.bam 43.1 M 0 8.9 M 0.206 SE 36 36 native 0.0 M 5.7 M 4.8 M 0.112 0.89 0.90 9.81 115 3.56 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/24688298-bad5-4ecf-a415-56d72ad5b5b8/@@download/cross_correlation_plot/ENCFF001HMV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB504ZNX john-stamatoyannopoulos:DS10410-library ENCFF001HMV Illumina Genome Analyzer II 2016-12-11T00:45:00.639880+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163bvQ0369F4yf5544b19G0 ENCSR000DTU https://www.encodeproject.org/experiments/ENCSR000DTU "histone,histone modification,narrow histone mark" H3K4me3-human HEK293 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF912BYL https://www.encodeproject.org/files/ENCFF912BYL/@@download/ENCFF912BYL.bam ENCFF298KTU https://www.encodeproject.org/files/ENCFF298KTU/@@download/ENCFF298KTU.bam 31.2 M 0 30.5 M 0.979 SE 36 36 None 0.0 M 26.4 M 20.3 M 0.650 0.77 0.80 6.26 120 2.89 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/33364649-c745-4674-a5a8-0bb5bf043965/@@download/cross_correlation_plot/ENCFF001FJZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB781ZBA john-stamatoyannopoulos:DS15760-library ENCFF001FJZ Illumina Genome Analyzer 2016-08-10T01:14:47.686630+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p9V803692492P6GkGQxJj ENCSR000DTU https://www.encodeproject.org/experiments/ENCSR000DTU "histone,histone modification,narrow histone mark" H3K4me3-human HEK293 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF028BQL https://www.encodeproject.org/files/ENCFF028BQL/@@download/ENCFF028BQL.bam ENCFF825AMS https://www.encodeproject.org/files/ENCFF825AMS/@@download/ENCFF825AMS.bam 21.3 M 0 20.7 M 0.972 SE 36 36 None 0.0 M 18.0 M 14.7 M 0.689 0.82 0.84 7.33 120 3.35 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/591ef2d5-e1bb-428d-9609-46f1bd09c9dc/@@download/cross_correlation_plot/ENCFF001FJY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB179DSB john-stamatoyannopoulos:DS15759-library ENCFF001FJY Illumina Genome Analyzer 2016-08-10T01:14:21.125419+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p9Y803699F2k1Gvk7G0FQ ENCSR000DTX https://www.encodeproject.org/experiments/ENCSR000DTX control Control-human HeLa-S3 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF883FFC https://www.encodeproject.org/files/ENCFF883FFC/@@download/ENCFF883FFC.bam ENCFF909YLO https://www.encodeproject.org/files/ENCFF909YLO/@@download/ENCFF909YLO.bam 18.6 M 0 18.2 M 0.979 SE 36 36 native 0.0 M 13.5 M 13.4 M 0.719 0.99 0.99 144.42 60 1.02 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/d8d503d8-4a20-4623-8fac-5ea1cddaddfe/@@download/cross_correlation_plot/ENCFF001HNS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB227GIM john-stamatoyannopoulos:DS11540-library ENCFF001HNS Illumina Genome Analyzer 2016-08-09T16:01:49.772756+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9X803696GPBjjv2bkV0j ENCSR000DUB https://www.encodeproject.org/experiments/ENCSR000DUB "transcription factor,RNA binding protein" CTCF-human HeLa-S3 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF639IFG https://www.encodeproject.org/files/ENCFF639IFG/@@download/ENCFF639IFG.bam ENCFF075OSG https://www.encodeproject.org/files/ENCFF075OSG/@@download/ENCFF075OSG.bam 16.0 M 0 9.5 M 0.592 SE 36 36 native 0.0 M 7.4 M 4.4 M 0.275 0.60 0.56 2.07 130 4.01 2.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4123c88-5a9a-4f79-a79c-b97808ec4cab/@@download/cross_correlation_plot/ENCFF001HNI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB996UXR john-stamatoyannopoulos:DS11552-library ENCFF001HNI Illumina Genome Analyzer II 2016-12-10T17:24:55.921157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16283803698j1Pf95Q52xgJ ENCSR000DUB https://www.encodeproject.org/experiments/ENCSR000DUB "transcription factor,RNA binding protein" CTCF-human HeLa-S3 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF691NNZ https://www.encodeproject.org/files/ENCFF691NNZ/@@download/ENCFF691NNZ.bam ENCFF070XOR https://www.encodeproject.org/files/ENCFF070XOR/@@download/ENCFF070XOR.bam 21.5 M 0 11.3 M 0.523 SE 36 36 native 0.0 M 8.7 M 8.1 M 0.378 0.94 0.95 21.41 100 3.75 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/c457b8c5-a38f-4028-b371-cbbd9c83f6ca/@@download/cross_correlation_plot/ENCFF001HNP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB390WHR john-stamatoyannopoulos:DS11167-library ENCFF001HNP Illumina Genome Analyzer II 2016-12-10T17:29:59.853490+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16289803690xXYVJ7Fj2bpx ENCSR000DTY https://www.encodeproject.org/experiments/ENCSR000DTY "histone,histone modification,broad histone mark" H3K27me3-human HeLa-S3 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF928PZN https://www.encodeproject.org/files/ENCFF928PZN/@@download/ENCFF928PZN.bam ENCFF163CJZ https://www.encodeproject.org/files/ENCFF163CJZ/@@download/ENCFF163CJZ.bam 17.7 M 0 14.7 M 0.827 SE 36 36 native 0.0 M 10.8 M 6.7 M 0.377 0.62 0.59 2.25 110 1.19 7.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7403595-4260-4b59-a3de-853239845c0e/@@download/cross_correlation_plot/ENCFF001FKM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB658CFR john-stamatoyannopoulos:DS12072-library ENCFF001FKM Illumina Genome Analyzer 2016-10-26T17:37:37.161692+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082K4Q0369KPb3j15B4p8qy ENCSR000DTY https://www.encodeproject.org/experiments/ENCSR000DTY "histone,histone modification,broad histone mark" H3K27me3-human HeLa-S3 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF284GFW https://www.encodeproject.org/files/ENCFF284GFW/@@download/ENCFF284GFW.bam ENCFF270BWD https://www.encodeproject.org/files/ENCFF270BWD/@@download/ENCFF270BWD.bam 18.9 M 0 16.0 M 0.846 SE 36 36 native 0.0 M 11.7 M 7.3 M 0.387 0.63 0.60 2.33 120 1.15 6.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f484d6b-96ac-4753-b0fe-94b29799e9e8/@@download/cross_correlation_plot/ENCFF001FKI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB230UJW john-stamatoyannopoulos:DS12070-library ENCFF001FKI Illumina Genome Analyzer 2016-10-26T17:37:48.550950+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082K8803698F1qV3kBFq34J ENCSR000DTZ https://www.encodeproject.org/experiments/ENCSR000DTZ "histone,histone modification,broad histone mark" H3K36me3-human HeLa-S3 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF884NXE https://www.encodeproject.org/files/ENCFF884NXE/@@download/ENCFF884NXE.bam ENCFF986BIA https://www.encodeproject.org/files/ENCFF986BIA/@@download/ENCFF986BIA.bam 17.9 M 0 17.4 M 0.968 SE 36 36 native 0.0 M 12.6 M 11.6 M 0.647 0.92 0.92 12.04 110 1.05 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/552204c7-1782-49b3-aa3d-2faaa4eb5ea2/@@download/cross_correlation_plot/ENCFF001FKT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB059TAM john-stamatoyannopoulos:DS12071-library ENCFF001FKT Illumina Genome Analyzer 2016-10-26T17:38:34.431768+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0821Y80369PQyG3V5B44Pvv ENCSR000DTZ https://www.encodeproject.org/experiments/ENCSR000DTZ "histone,histone modification,broad histone mark" H3K36me3-human HeLa-S3 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF281USW https://www.encodeproject.org/files/ENCFF281USW/@@download/ENCFF281USW.bam ENCFF661NSK https://www.encodeproject.org/files/ENCFF661NSK/@@download/ENCFF661NSK.bam 18.7 M 0 18.3 M 0.981 SE 36 36 native 0.0 M 13.4 M 12.9 M 0.690 0.96 0.96 23.70 125 1.04 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/43b6fbf2-ab98-491c-af02-dd33c47f7157/@@download/cross_correlation_plot/ENCFF001FKV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB390DWY john-stamatoyannopoulos:DS12201-library ENCFF001FKV Illumina Genome Analyzer 2016-10-26T18:07:08.976378+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0821k80369PQyG3V5B44Px5 ENCSR000DUA https://www.encodeproject.org/experiments/ENCSR000DUA "histone,histone modification,narrow histone mark" H3K4me3-human HeLa-S3 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF681ZZF https://www.encodeproject.org/files/ENCFF681ZZF/@@download/ENCFF681ZZF.bam ENCFF420HNC https://www.encodeproject.org/files/ENCFF420HNC/@@download/ENCFF420HNC.bam 30.9 M 0 16.9 M 0.547 SE 36 36 None 0.0 M 13.7 M 12.6 M 0.409 0.92 0.93 14.75 145 2.36 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca0a6bfa-a38a-4dab-ae30-523ede9e2744/@@download/cross_correlation_plot/ENCFF001FLG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB552LBV john-stamatoyannopoulos:DS11555-library ENCFF001FLG Illumina Genome Analyzer 2016-08-10T01:14:09.107099+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBZ00369BjkVxP0gkkqQF ENCSR000DUA https://www.encodeproject.org/experiments/ENCSR000DUA "histone,histone modification,narrow histone mark" H3K4me3-human HeLa-S3 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF084LPN https://www.encodeproject.org/files/ENCFF084LPN/@@download/ENCFF084LPN.bam ENCFF112FSD https://www.encodeproject.org/files/ENCFF112FSD/@@download/ENCFF112FSD.bam 14.7 M 0 13.7 M 0.927 SE 36 36 None 0.0 M 11.2 M 10.3 M 0.699 0.92 0.92 14.13 145 2.72 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c4888b1-a936-4366-80c3-da6e7f55441d/@@download/cross_correlation_plot/ENCFF001FLD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB786XTY john-stamatoyannopoulos:DS11553-library ENCFF001FLD Illumina Genome Analyzer 2016-08-10T01:13:33.802839+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBf80369J0gjYVZgfFVX4 ENCSR000DUC https://www.encodeproject.org/experiments/ENCSR000DUC control Control-human HepG2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF887ZEB https://www.encodeproject.org/files/ENCFF887ZEB/@@download/ENCFF887ZEB.bam ENCFF610SOD https://www.encodeproject.org/files/ENCFF610SOD/@@download/ENCFF610SOD.bam 18.3 M 0 17.9 M 0.981 SE 36 36 native 0.0 M 13.3 M 13.2 M 0.720 0.99 1.00 210.18 60 1.02 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/7543e67b-b935-4c81-8a95-8d7055cd447a/@@download/cross_correlation_plot/ENCFF001HOD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB993FZA john-stamatoyannopoulos:DS13599-library ENCFF001HOD Illumina Genome Analyzer 2016-08-09T16:01:31.639074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9Zj0369F97Byg82v2pxb ENCSR000DUG https://www.encodeproject.org/experiments/ENCSR000DUG "transcription factor,RNA binding protein" CTCF-human HepG2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF440GGX https://www.encodeproject.org/files/ENCFF440GGX/@@download/ENCFF440GGX.bam ENCFF765BSR https://www.encodeproject.org/files/ENCFF765BSR/@@download/ENCFF765BSR.bam 23.4 M 0 13.7 M 0.586 SE 36 36 native 0.0 M 10.6 M 9.5 M 0.404 0.89 0.91 12.03 105 3.09 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/b8c68727-2ff1-4ae6-8c86-ce86088db478/@@download/cross_correlation_plot/ENCFF001HNT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB045XWU john-stamatoyannopoulos:DS10700-library ENCFF001HNT Illumina Genome Analyzer II 2016-12-10T20:31:24.625136+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162fzj03695Kj1j8qPQgkG2 ENCSR000DUG https://www.encodeproject.org/experiments/ENCSR000DUG "transcription factor,RNA binding protein" CTCF-human HepG2 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF618KYW https://www.encodeproject.org/files/ENCFF618KYW/@@download/ENCFF618KYW.bam ENCFF026NDL https://www.encodeproject.org/files/ENCFF026NDL/@@download/ENCFF026NDL.bam 28.2 M 0 16.8 M 0.597 SE 36 36 native 0.0 M 13.1 M 7.3 M 0.259 0.56 0.52 1.84 95 2.78 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb427699-1aff-4b9a-95fb-900da03255d2/@@download/cross_correlation_plot/ENCFF001HNU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB697GFU john-stamatoyannopoulos:DS11677-library ENCFF001HNU Illumina Genome Analyzer II 2016-12-10T20:38:42.628202+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162g4j03695F8Bk64ff06zP ENCSR000DUE https://www.encodeproject.org/experiments/ENCSR000DUE "histone,histone modification,broad histone mark" H3K27me3-human HepG2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF394DQA https://www.encodeproject.org/files/ENCFF394DQA/@@download/ENCFF394DQA.bam ENCFF717MOR https://www.encodeproject.org/files/ENCFF717MOR/@@download/ENCFF717MOR.bam 17.7 M 0 10.0 M 0.565 SE 36 36 native 0.0 M 7.5 M 5.3 M 0.301 0.71 0.70 3.09 105 1.14 5.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2934ec8-4480-4511-9200-4e093234b61b/@@download/cross_correlation_plot/ENCFF001FLQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB884PAC john-stamatoyannopoulos:DS12076-library ENCFF001FLQ Illumina Genome Analyzer 2016-10-26T17:38:35.794503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082F000369G9kV1j1K1fK2x ENCSR000DUE https://www.encodeproject.org/experiments/ENCSR000DUE "histone,histone modification,broad histone mark" H3K27me3-human HepG2 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF030HAG https://www.encodeproject.org/files/ENCFF030HAG/@@download/ENCFF030HAG.bam ENCFF634XQW https://www.encodeproject.org/files/ENCFF634XQW/@@download/ENCFF634XQW.bam 14.3 M 0 13.4 M 0.935 SE 36 36 native 0.0 M 9.8 M 9.6 M 0.667 0.97 0.97 36.80 125 1.05 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/8fd6267a-9bf5-4261-800c-406fb7b48150/@@download/cross_correlation_plot/ENCFF001FLT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB240EVZ john-stamatoyannopoulos:DS12206-library ENCFF001FLT Illumina Genome Analyzer 2016-10-26T17:38:02.308181+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082F4Q036923z1QYVBPkq7g ENCSR000DUD https://www.encodeproject.org/experiments/ENCSR000DUD "histone,histone modification,broad histone mark" H3K36me3-human HepG2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF660VAM https://www.encodeproject.org/files/ENCFF660VAM/@@download/ENCFF660VAM.bam ENCFF570BYE https://www.encodeproject.org/files/ENCFF570BYE/@@download/ENCFF570BYE.bam 18.8 M 0 18.1 M 0.967 SE 36 36 native 0.0 M 13.3 M 12.8 M 0.684 0.96 0.97 28.62 100 1.06 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a34300d-eb03-4c20-a767-a4bf951f3c11/@@download/cross_correlation_plot/ENCFF001FMA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB137VZT john-stamatoyannopoulos:DS12207-library ENCFF001FMA Illumina Genome Analyzer 2016-10-26T17:37:27.535503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Kjj0369KPb3j15B4p8vq ENCSR000DUD https://www.encodeproject.org/experiments/ENCSR000DUD "histone,histone modification,broad histone mark" H3K36me3-human HepG2 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF130PYS https://www.encodeproject.org/files/ENCFF130PYS/@@download/ENCFF130PYS.bam ENCFF717YNG https://www.encodeproject.org/files/ENCFF717YNG/@@download/ENCFF717YNG.bam 19.5 M 0 18.8 M 0.961 SE 36 36 native 0.0 M 13.8 M 12.7 M 0.649 0.92 0.92 11.73 100 1.06 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0f692a6-a1f4-4bc1-ab30-f212d198b2c9/@@download/cross_correlation_plot/ENCFF001FMC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB637DRU john-stamatoyannopoulos:DS12075-library ENCFF001FMC Illumina Genome Analyzer 2016-10-26T17:36:39.881478+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082KvQ0369BqVfYq19ZB93J ENCSR000DUF https://www.encodeproject.org/experiments/ENCSR000DUF "histone,histone modification,narrow histone mark" H3K4me3-human HepG2 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF426UGV https://www.encodeproject.org/files/ENCFF426UGV/@@download/ENCFF426UGV.bam ENCFF574QKR https://www.encodeproject.org/files/ENCFF574QKR/@@download/ENCFF574QKR.bam 16.4 M 0 15.0 M 0.917 SE 36 36 None 0.0 M 12.9 M 11.3 M 0.690 0.88 0.88 9.25 155 2.60 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc275298-ada3-4f6b-978d-2f27350c7b40/@@download/cross_correlation_plot/ENCFF001FMH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB609AAZ john-stamatoyannopoulos:DS11781-library ENCFF001FMH Illumina Genome Analyzer 2016-08-10T01:14:54.567996+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7Z003691gzQyYkvVqVk7 ENCSR000DUF https://www.encodeproject.org/experiments/ENCSR000DUF "histone,histone modification,narrow histone mark" H3K4me3-human HepG2 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF223DKE https://www.encodeproject.org/files/ENCFF223DKE/@@download/ENCFF223DKE.bam ENCFF960EAT https://www.encodeproject.org/files/ENCFF960EAT/@@download/ENCFF960EAT.bam 16.4 M 0 15.3 M 0.931 SE 36 36 None 0.0 M 13.1 M 11.5 M 0.704 0.88 0.89 9.59 155 2.53 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/d971648a-021f-4774-a137-c025898b34da/@@download/cross_correlation_plot/ENCFF001FMG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB283CCY john-stamatoyannopoulos:DS11780-library ENCFF001FMG Illumina Genome Analyzer I 2016-08-10T01:14:27.424959+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7f803691gzQyYkvVqVkP ENCSR000DUL https://www.encodeproject.org/experiments/ENCSR000DUL control Control-human HFF-Myc primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF355KUJ https://www.encodeproject.org/files/ENCFF355KUJ/@@download/ENCFF355KUJ.bam ENCFF111JEG https://www.encodeproject.org/files/ENCFF111JEG/@@download/ENCFF111JEG.bam 24.7 M 0 24.4 M 0.988 SE 36 36 native 0.0 M 18.5 M 18.3 M 0.740 0.99 0.99 109.08 155 1.01 0.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5cdb17a-1366-45e5-a436-f497e04789dc/@@download/cross_correlation_plot/ENCFF001HOY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB309TPO john-stamatoyannopoulos:DS18321-library ENCFF001HOY Illumina Genome Analyzer 2016-08-09T16:02:02.888833+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9kQ0369J0Bzfkv2XyxPq ENCSR000DUM https://www.encodeproject.org/experiments/ENCSR000DUM "transcription factor,RNA binding protein" CTCF-human HFF-Myc primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF115QJZ https://www.encodeproject.org/files/ENCFF115QJZ/@@download/ENCFF115QJZ.bam ENCFF093NDW https://www.encodeproject.org/files/ENCFF093NDW/@@download/ENCFF093NDW.bam 20.7 M 0 18.2 M 0.878 SE 36 36 native 0.0 M 13.9 M 12.4 M 0.600 0.89 0.89 9.47 160 1.98 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/d29112d8-f288-4e57-b9ee-c79ab6f1d4bf/@@download/cross_correlation_plot/ENCFF001HOQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB340XFO john-stamatoyannopoulos:DS18322-library ENCFF001HOQ Illumina Genome Analyzer 2016-12-10T18:02:58.881391+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162KJQ0369KQ3Yk1yz1kfF1 ENCSR000DUM https://www.encodeproject.org/experiments/ENCSR000DUM "transcription factor,RNA binding protein" CTCF-human HFF-Myc primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF208QQC https://www.encodeproject.org/files/ENCFF208QQC/@@download/ENCFF208QQC.bam ENCFF988PPV https://www.encodeproject.org/files/ENCFF988PPV/@@download/ENCFF988PPV.bam 26.0 M 0 24.2 M 0.930 SE 36 36 native 0.0 M 18.8 M 16.6 M 0.638 0.89 0.89 8.84 165 1.54 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/62969448-7f66-47cf-8335-b607020b3964/@@download/cross_correlation_plot/ENCFF001HOR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB203MUP john-stamatoyannopoulos:DS18323-library ENCFF001HOR Illumina Genome Analyzer 2016-12-10T18:58:14.716341+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162KX80369BgG8x1ygv1Vy8 ENCSR000DUK https://www.encodeproject.org/experiments/ENCSR000DUK "histone,histone modification,narrow histone mark" H3K4me3-human HFF-Myc primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF491IGN https://www.encodeproject.org/files/ENCFF491IGN/@@download/ENCFF491IGN.bam ENCFF382CCI https://www.encodeproject.org/files/ENCFF382CCI/@@download/ENCFF382CCI.bam 16.5 M 0 15.8 M 0.959 SE 36 36 None 0.0 M 14.0 M 11.6 M 0.702 0.83 0.83 6.20 225 2.41 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/b84e4ea7-1c5f-4312-86f7-9c8ba3d4f2c2/@@download/cross_correlation_plot/ENCFF001FND.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695UDO john-stamatoyannopoulos:DS18324-library ENCFF001FND Illumina Genome Analyzer 2016-08-10T01:15:56.504894+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p4zQ03697yXkpZbvqpGzj ENCSR000DUK https://www.encodeproject.org/experiments/ENCSR000DUK "histone,histone modification,narrow histone mark" H3K4me3-human HFF-Myc primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF035JCC https://www.encodeproject.org/files/ENCFF035JCC/@@download/ENCFF035JCC.bam ENCFF660ZDY https://www.encodeproject.org/files/ENCFF660ZDY/@@download/ENCFF660ZDY.bam 17.7 M 0 17.3 M 0.977 SE 36 36 None 0.0 M 15.4 M 12.9 M 0.728 0.84 0.84 6.65 220 2.24 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d810279-5831-4564-9725-d93c7f1c32ad/@@download/cross_correlation_plot/ENCFF001FNC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB680ICZ john-stamatoyannopoulos:DS18325-library ENCFF001FNC Illumina Genome Analyzer 2016-08-10T01:15:46.834024+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p51803691gzQyYkvVqVg8 ENCSR000DUN https://www.encodeproject.org/experiments/ENCSR000DUN control Control-human HL-60 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF337ZUN https://www.encodeproject.org/files/ENCFF337ZUN/@@download/ENCFF337ZUN.bam ENCFF151YAO https://www.encodeproject.org/files/ENCFF151YAO/@@download/ENCFF151YAO.bam 17.2 M 0 16.7 M 0.970 SE 36 36 native 0.0 M 12.2 M 12.1 M 0.704 0.99 0.99 146.30 85 1.02 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce53464c-fbc9-4a7d-b2c6-3b0e6b570af4/@@download/cross_correlation_plot/ENCFF001HPI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB199FOA john-stamatoyannopoulos:DS13664-library ENCFF001HPI Illumina Genome Analyzer 2016-08-09T16:01:39.942883+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9v80369BB4PPpG2jBj3j ENCSR000DUP https://www.encodeproject.org/experiments/ENCSR000DUP "transcription factor,RNA binding protein" CTCF-human HL-60 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF525MRS https://www.encodeproject.org/files/ENCFF525MRS/@@download/ENCFF525MRS.bam ENCFF397REA https://www.encodeproject.org/files/ENCFF397REA/@@download/ENCFF397REA.bam 18.2 M 0 10.4 M 0.571 SE 36 36 native 0.0 M 7.3 M 7.1 M 0.393 0.98 0.98 43.30 125 1.90 2.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/782e419f-e28d-4c0f-97c1-9d136109ac69/@@download/cross_correlation_plot/ENCFF001HPF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB197YIS john-stamatoyannopoulos:DS9413-library ENCFF001HPF Illumina Genome Analyzer II 2017-04-09T01:11:01.878519+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZgXKj0369JvqJ288bJ54Fk ENCSR000DUO https://www.encodeproject.org/experiments/ENCSR000DUO "histone,histone modification,narrow histone mark" H3K4me3-human HL-60 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF693QTE https://www.encodeproject.org/files/ENCFF693QTE/@@download/ENCFF693QTE.bam ENCFF533EPC https://www.encodeproject.org/files/ENCFF533EPC/@@download/ENCFF533EPC.bam 14.5 M 0 10.3 M 0.707 SE 36 36 None 0.0 M 9.0 M 7.6 M 0.524 0.85 0.85 6.95 160 3.61 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/e335e167-cbed-4cec-b9d6-c82442439c5d/@@download/cross_correlation_plot/ENCFF001FNT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB178PXP john-stamatoyannopoulos:DS11795-library ENCFF001FNT Illumina Genome Analyzer 2016-08-10T01:15:29.135990+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5g0036927J18bVvf18f1 ENCSR000DUO https://www.encodeproject.org/experiments/ENCSR000DUO "histone,histone modification,narrow histone mark" H3K4me3-human HL-60 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF355WJQ https://www.encodeproject.org/files/ENCFF355WJQ/@@download/ENCFF355WJQ.bam ENCFF087TPM https://www.encodeproject.org/files/ENCFF087TPM/@@download/ENCFF087TPM.bam 15.2 M 0 12.5 M 0.824 SE 36 36 None 0.0 M 10.8 M 9.2 M 0.605 0.85 0.86 7.20 155 3.32 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/2dd6ad68-e621-4d8f-b523-9e101fe82f01/@@download/cross_correlation_plot/ENCFF001FNS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB669EBS john-stamatoyannopoulos:DS11797-library ENCFF001FNS Illumina Genome Analyzer 2016-08-10T01:15:51.788189+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5k803695b8XJVxvzFzb3 ENCSR000DVT https://www.encodeproject.org/experiments/ENCSR000DVT control Control-human Jurkat clone E61 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF862DPC https://www.encodeproject.org/files/ENCFF862DPC/@@download/ENCFF862DPC.bam ENCFF830DMG https://www.encodeproject.org/files/ENCFF830DMG/@@download/ENCFF830DMG.bam 22.9 M 0 22.2 M 0.971 SE 36 36 native 0.0 M 16.2 M 16.1 M 0.705 1.00 1.00 297.68 90 1.01 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ed73d34-af39-4d9a-ad71-8a87d05c8be7/@@download/cross_correlation_plot/ENCFF001HTJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB094EDV john-stamatoyannopoulos:DS16193-library ENCFF001HTJ Illumina Genome Analyzer 2016-08-09T16:01:49.379179+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZBXQ036927gfXkG2b30GX ENCSR000DVU https://www.encodeproject.org/experiments/ENCSR000DVU "histone,histone modification,narrow histone mark" H3K4me3-human Jurkat clone E61 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF576LCR https://www.encodeproject.org/files/ENCFF576LCR/@@download/ENCFF576LCR.bam ENCFF936DFB https://www.encodeproject.org/files/ENCFF936DFB/@@download/ENCFF936DFB.bam 31.5 M 0 31.0 M 0.984 SE 36 36 None 0.0 M 26.5 M 20.7 M 0.655 0.78 0.81 6.23 150 2.56 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/df784b34-b3e3-4a09-9ac5-15fec1bafc27/@@download/cross_correlation_plot/ENCFF001FUD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB868HNG john-stamatoyannopoulos:DS16197-library ENCFF001FUD Illumina Genome Analyzer 2016-08-10T01:15:23.179970+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7kQ0369BJvqxV5vxVX52 ENCSR000DVU https://www.encodeproject.org/experiments/ENCSR000DVU "histone,histone modification,narrow histone mark" H3K4me3-human Jurkat clone E61 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF790LIJ https://www.encodeproject.org/files/ENCFF790LIJ/@@download/ENCFF790LIJ.bam ENCFF984CKQ https://www.encodeproject.org/files/ENCFF984CKQ/@@download/ENCFF984CKQ.bam 29.4 M 0 28.9 M 0.984 SE 36 36 None 0.0 M 24.8 M 19.6 M 0.667 0.79 0.81 6.26 145 2.65 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe57ef7b-0b56-4414-aadd-054e16159f64/@@download/cross_correlation_plot/ENCFF001FUG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB676HDJ john-stamatoyannopoulos:DS16196-library ENCFF001FUG Illumina Genome Analyzer 2016-08-10T01:15:01.034722+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p7v0036927J18bVvf18gX ENCSR000DWA https://www.encodeproject.org/experiments/ENCSR000DWA control Control-human K562 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF873PSH https://www.encodeproject.org/files/ENCFF873PSH/@@download/ENCFF873PSH.bam ENCFF518TNE https://www.encodeproject.org/files/ENCFF518TNE/@@download/ENCFF518TNE.bam 18.1 M 0 17.9 M 0.988 SE 36 36 None 0.0 M 13.2 M 13.1 M 0.724 1.00 1.00 249.09 85 1.02 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1917920-4071-4e9c-a966-37218e0eda2a/@@download/cross_correlation_plot/ENCFF001HTT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB166GTO john-stamatoyannopoulos:DS11488-library ENCFF001HTT Illumina Genome Analyzer 2016-07-28T00:31:53.297750+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGY4Y00369J6jXXQ017JV0b ENCSR000DWE https://www.encodeproject.org/experiments/ENCSR000DWE "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF081HVQ https://www.encodeproject.org/files/ENCFF081HVQ/@@download/ENCFF081HVQ.bam ENCFF083YOH https://www.encodeproject.org/files/ENCFF083YOH/@@download/ENCFF083YOH.bam 32.7 M 0 18.8 M 0.574 SE 36 36 None 0.0 M 14.1 M 12.9 M 0.393 0.91 0.93 15.44 110 2.60 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6afe0c0-c1e0-4ab8-a38c-406dbc83a830/@@download/cross_correlation_plot/ENCFF001HTO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB160TGW john-stamatoyannopoulos:DS11247-library ENCFF001HTO Illumina Genome Analyzer II 2016-07-28T00:31:59.237965+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYbX00369FBX6gbJGByfGX ENCSR000DWE https://www.encodeproject.org/experiments/ENCSR000DWE "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF494VZW https://www.encodeproject.org/files/ENCFF494VZW/@@download/ENCFF494VZW.bam ENCFF194JHV https://www.encodeproject.org/files/ENCFF194JHV/@@download/ENCFF194JHV.bam 28.0 M 0 15.7 M 0.562 SE 36 36 None 0.0 M 12.1 M 5.7 M 0.203 0.47 0.41 1.42 140 2.75 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/64b16bb2-5a4c-4d39-affa-f61fca88be39/@@download/cross_correlation_plot/ENCFF001HTP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB637AIR john-stamatoyannopoulos:DS11508-library ENCFF001HTP Illumina Genome Analyzer II 2016-07-28T00:31:38.566661+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYbZ00369FBX6gbJGByfGy ENCSR000DWC https://www.encodeproject.org/experiments/ENCSR000DWC "histone,histone modification,broad histone mark" H3K27me3-human K562 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF113KQF https://www.encodeproject.org/files/ENCFF113KQF/@@download/ENCFF113KQF.bam ENCFF936PYI https://www.encodeproject.org/files/ENCFF936PYI/@@download/ENCFF936PYI.bam 16.1 M 0 12.0 M 0.745 SE 36 None 0.0 M 8.7 M 4.7 M 0.292 0.54 0.49 1.73 130 1.30 8.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/49efde8e-e199-4b3c-8421-29fa58c2f51c/@@download/cross_correlation_plot/ENCFF001FWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB164URM john-stamatoyannopoulos:DS12066-library ENCFF001FWK Illumina Genome Analyzer 2016-07-28T00:31:30.209863+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYbJ003695kFGBYkGK8pBF ENCSR000DWC https://www.encodeproject.org/experiments/ENCSR000DWC "histone,histone modification,broad histone mark" H3K27me3-human K562 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF392CJG https://www.encodeproject.org/files/ENCFF392CJG/@@download/ENCFF392CJG.bam ENCFF469UUK https://www.encodeproject.org/files/ENCFF469UUK/@@download/ENCFF469UUK.bam 16.8 M 0 10.8 M 0.640 SE 36 None 0.0 M 7.9 M 5.4 M 0.321 0.69 0.67 2.82 115 1.19 6.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/b756837e-164d-4830-8d73-9ae47d281f57/@@download/cross_correlation_plot/ENCFF001FWM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB048VFQ john-stamatoyannopoulos:DS12068-library ENCFF001FWM Illumina Genome Analyzer 2016-07-28T00:31:32.324136+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYbP00369K19V3kJG0xQgv ENCSR000DWB https://www.encodeproject.org/experiments/ENCSR000DWB "histone,histone modification,broad histone mark" H3K36me3-human K562 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF989ORU https://www.encodeproject.org/files/ENCFF989ORU/@@download/ENCFF989ORU.bam ENCFF704UTL https://www.encodeproject.org/files/ENCFF704UTL/@@download/ENCFF704UTL.bam 18.2 M 0 17.5 M 0.963 SE 36 36 native 0.0 M 12.7 M 11.2 M 0.615 0.88 0.88 8.24 120 1.07 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/b041a521-d7a4-4792-8519-8605c439d5c3/@@download/cross_correlation_plot/ENCFF001FWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB838QDS john-stamatoyannopoulos:DS12067-library ENCFF001FWV Illumina Genome Analyzer 2016-10-26T17:58:55.698929+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0821z803697KPkyX9BPPpx4 ENCSR000DWB https://www.encodeproject.org/experiments/ENCSR000DWB "histone,histone modification,broad histone mark" H3K36me3-human K562 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF975JFV https://www.encodeproject.org/files/ENCFF975JFV/@@download/ENCFF975JFV.bam ENCFF802TAZ https://www.encodeproject.org/files/ENCFF802TAZ/@@download/ENCFF802TAZ.bam 18.5 M 0 18.1 M 0.978 SE 36 36 native 0.0 M 13.1 M 12.7 M 0.687 0.97 0.97 32.62 115 1.05 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/16d5a775-80e3-4bdd-b1c5-24057904d073/@@download/cross_correlation_plot/ENCFF001FWW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB594HGR john-stamatoyannopoulos:DS12177-library ENCFF001FWW Illumina Genome Analyzer 2016-10-26T17:58:55.493092+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0822780369PQyG3V5B44Pxg ENCSR000DWD https://www.encodeproject.org/experiments/ENCSR000DWD "histone,histone modification,narrow histone mark" H3K4me3-human K562 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF185YRK https://www.encodeproject.org/files/ENCFF185YRK/@@download/ENCFF185YRK.bam ENCFF193AYD https://www.encodeproject.org/files/ENCFF193AYD/@@download/ENCFF193AYD.bam 18.7 M 0 17.7 M 0.948 SE 36 None 0.0 M 14.5 M 13.0 M 0.697 0.90 0.91 11.98 145 2.28 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a13d2af-3e1f-4292-ab3e-02e0b250728d/@@download/cross_correlation_plot/ENCFF001FXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB100QPV john-stamatoyannopoulos:DS11507-library ENCFF001FXG Illumina Genome Analyzer 2016-07-27T22:23:38.856904+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBjj0369JB9ykPvgzPPXZ ENCSR000DWD https://www.encodeproject.org/experiments/ENCSR000DWD "histone,histone modification,narrow histone mark" H3K4me3-human K562 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF955AMI https://www.encodeproject.org/files/ENCFF955AMI/@@download/ENCFF955AMI.bam ENCFF458XJQ https://www.encodeproject.org/files/ENCFF458XJQ/@@download/ENCFF458XJQ.bam 17.0 M 0 16.0 M 0.944 SE 36 None 0.0 M 13.0 M 11.9 M 0.701 0.92 0.92 13.92 145 2.24 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5051620-381e-4f5e-9c17-5b4eaa9b4f07/@@download/cross_correlation_plot/ENCFF001FXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB082SOT john-stamatoyannopoulos:DS11509-library ENCFF001FXH Illumina Genome Analyzer 2016-07-27T22:23:17.218513+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pBpj0369561xqZQgj50pV ENCSR000DWT https://www.encodeproject.org/experiments/ENCSR000DWT control Control-human keratinocyte primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF962BWT https://www.encodeproject.org/files/ENCFF962BWT/@@download/ENCFF962BWT.bam ENCFF969GRO https://www.encodeproject.org/files/ENCFF969GRO/@@download/ENCFF969GRO.bam 19.8 M 0 19.3 M 0.974 SE 36 36 native 0.0 M 14.1 M 13.8 M 0.699 0.98 0.98 50.00 115 1.02 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/34b3ac84-3e13-4c63-9a8e-77bf30eaaade/@@download/cross_correlation_plot/ENCFF001HVV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB401PCE john-stamatoyannopoulos:DS11542-library ENCFF001HVV Illumina Genome Analyzer 2016-08-09T16:01:20.690725+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZF300369J0Bzfkv2XyxQy ENCSR000DWX https://www.encodeproject.org/experiments/ENCSR000DWX "transcription factor,RNA binding protein" CTCF-human keratinocyte primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF158AWG https://www.encodeproject.org/files/ENCFF158AWG/@@download/ENCFF158AWG.bam ENCFF700FNC https://www.encodeproject.org/files/ENCFF700FNC/@@download/ENCFF700FNC.bam 13.3 M 0 12.3 M 0.920 SE 36 36 native 0.0 M 10.0 M 5.3 M 0.399 0.53 0.51 1.84 115 6.34 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/787acaf9-d335-493f-a682-0727e21a915e/@@download/cross_correlation_plot/ENCFF001HVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB563VHF john-stamatoyannopoulos:DS12396-library ENCFF001HVN Illumina Genome Analyzer II 2016-12-10T20:24:43.051515+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162gF803690xXYVJ7Fj2bvg ENCSR000DWX https://www.encodeproject.org/experiments/ENCSR000DWX "transcription factor,RNA binding protein" CTCF-human keratinocyte primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF317OFS https://www.encodeproject.org/files/ENCFF317OFS/@@download/ENCFF317OFS.bam ENCFF913RSB https://www.encodeproject.org/files/ENCFF913RSB/@@download/ENCFF913RSB.bam 17.8 M 0 12.5 M 0.704 SE 36 36 native 0.0 M 10.0 M 6.1 M 0.343 0.61 0.58 2.18 165 2.95 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/280ccc6a-433c-4b8f-a959-b911aa12f975/@@download/cross_correlation_plot/ENCFF001HVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB893KHA john-stamatoyannopoulos:DS11556-library ENCFF001HVQ Illumina Genome Analyzer II 2016-12-10T20:27:37.593942+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162gQ0036969X0jJ6p3ffQB ENCSR000DWU https://www.encodeproject.org/experiments/ENCSR000DWU "histone,histone modification,broad histone mark" H3K27me3-human keratinocyte primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF696RSF https://www.encodeproject.org/files/ENCFF696RSF/@@download/ENCFF696RSF.bam ENCFF885SRT https://www.encodeproject.org/files/ENCFF885SRT/@@download/ENCFF885SRT.bam 31.7 M 0 22.3 M 0.704 SE 36 36 native 0.0 M 16.6 M 4.5 M 0.142 0.27 0.19 1.04 160 1.23 7.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ba4f1de-e767-47e0-9e17-778cf96cd36c/@@download/cross_correlation_plot/ENCFF001GAJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB225QRQ john-stamatoyannopoulos:DS12078-library ENCFF001GAJ Illumina Genome Analyzer 2016-10-26T17:58:36.062920+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0823k003699pQzk2JB6K7pv ENCSR000DWU https://www.encodeproject.org/experiments/ENCSR000DWU "histone,histone modification,broad histone mark" H3K27me3-human keratinocyte primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF136PJS https://www.encodeproject.org/files/ENCFF136PJS/@@download/ENCFF136PJS.bam ENCFF390UXG https://www.encodeproject.org/files/ENCFF390UXG/@@download/ENCFF390UXG.bam 14.9 M 0 8.8 M 0.592 SE 36 36 native 0.0 M 6.6 M 4.0 M 0.271 0.62 0.58 2.17 120 1.25 7.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/19e5ff05-4fe0-40b1-82c2-4fc8dcd20780/@@download/cross_correlation_plot/ENCFF001FZZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB700WWU john-stamatoyannopoulos:DS12080-library ENCFF001FZZ Illumina Genome Analyzer 2016-10-26T17:58:09.377471+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08240003697KPkyX9BPPpz3 ENCSR000DWW https://www.encodeproject.org/experiments/ENCSR000DWW "histone,histone modification,broad histone mark" H3K36me3-human keratinocyte primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF352EMC https://www.encodeproject.org/files/ENCFF352EMC/@@download/ENCFF352EMC.bam ENCFF550ODY https://www.encodeproject.org/files/ENCFF550ODY/@@download/ENCFF550ODY.bam 29.3 M 0 16.6 M 0.564 SE 36 36 native 0.0 M 11.4 M 10.8 M 0.370 0.95 0.95 21.13 115 1.07 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/064b6052-f06a-4b93-9c90-07ac25e08d31/@@download/cross_correlation_plot/ENCFF001GAI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB245RTD john-stamatoyannopoulos:DS12237-library ENCFF001GAI Illumina Genome Analyzer 2016-10-26T17:39:04.642822+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08219Q0369KxbFbzV9pvvXJ ENCSR000DWW https://www.encodeproject.org/experiments/ENCSR000DWW "histone,histone modification,broad histone mark" H3K36me3-human keratinocyte primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF418GTR https://www.encodeproject.org/files/ENCFF418GTR/@@download/ENCFF418GTR.bam ENCFF014MYY https://www.encodeproject.org/files/ENCFF014MYY/@@download/ENCFF014MYY.bam 17.4 M 0 16.5 M 0.950 SE 36 36 native 0.0 M 12.4 M 10.9 M 0.628 0.88 0.88 8.08 125 1.07 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/f04ccfa4-c616-4634-9c8f-4772b70a6a88/@@download/cross_correlation_plot/ENCFF001GAM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB743ABM john-stamatoyannopoulos:DS12240-library ENCFF001GAM Illumina Genome Analyzer 2016-10-26T17:38:35.511830+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0821KQ036923pJJqk9xzYgy ENCSR000DWV https://www.encodeproject.org/experiments/ENCSR000DWV "histone,histone modification,narrow histone mark" H3K4me3-human keratinocyte primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF185JFT https://www.encodeproject.org/files/ENCFF185JFT/@@download/ENCFF185JFT.bam ENCFF009OZM https://www.encodeproject.org/files/ENCFF009OZM/@@download/ENCFF009OZM.bam 15.3 M 0 12.8 M 0.833 SE 36 36 None 0.0 M 11.1 M 9.5 M 0.620 0.85 0.86 7.38 200 3.32 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/88074b78-1d87-444c-9c05-3502b919734c/@@download/cross_correlation_plot/ENCFF001GAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB254CXI john-stamatoyannopoulos:DS11559-library ENCFF001GAN Illumina Genome Analyzer 2016-08-10T01:15:30.309812+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5XQ036927J18bVvf18bk ENCSR000DWV https://www.encodeproject.org/experiments/ENCSR000DWV "histone,histone modification,narrow histone mark" H3K4me3-human keratinocyte primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF412NVD https://www.encodeproject.org/files/ENCFF412NVD/@@download/ENCFF412NVD.bam ENCFF466WVH https://www.encodeproject.org/files/ENCFF466WVH/@@download/ENCFF466WVH.bam 17.8 M 0 12.2 M 0.686 SE 36 36 None 0.0 M 10.6 M 9.3 M 0.519 0.87 0.88 8.51 195 3.14 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/afe5e144-93e4-470a-a5ed-1b5311a7a779/@@download/cross_correlation_plot/ENCFF001GAV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB958ICW john-stamatoyannopoulos:DS11557-library ENCFF001GAV Illumina Genome Analyzer 2016-08-10T01:16:13.345202+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p5ZQ03699yPVZfVvxfBVx ENCSR000DVD https://www.encodeproject.org/experiments/ENCSR000DVD control Control-human kidney epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF115YWW https://www.encodeproject.org/files/ENCFF115YWW/@@download/ENCFF115YWW.bam ENCFF047NAO https://www.encodeproject.org/files/ENCFF047NAO/@@download/ENCFF047NAO.bam 18.7 M 0 18.2 M 0.975 SE 36 36 native 0.0 M 13.7 M 13.5 M 0.722 0.99 0.99 99.63 65 1.02 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/5457d78d-d5d7-47e1-aece-12c403fac802/@@download/cross_correlation_plot/ENCFF001HRU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723MEE john-stamatoyannopoulos:DS11549-library ENCFF001HRU Illumina Genome Analyzer 2016-08-09T16:01:39.495277+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZB880369BB4PPpG2jBj4G ENCSR000DVH https://www.encodeproject.org/experiments/ENCSR000DVH "transcription factor,RNA binding protein" CTCF-human kidney epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF874XSI https://www.encodeproject.org/files/ENCFF874XSI/@@download/ENCFF874XSI.bam ENCFF463DJV https://www.encodeproject.org/files/ENCFF463DJV/@@download/ENCFF463DJV.bam 15.2 M 0 10.4 M 0.687 SE 36 36 native 0.0 M 8.6 M 5.6 M 0.368 0.65 0.63 2.53 135 5.15 2.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b07df82-7a41-431c-9948-3d7429c04952/@@download/cross_correlation_plot/ENCFF001HRL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB538WRF john-stamatoyannopoulos:DS11572-library ENCFF001HRL Illumina Genome Analyzer II 2016-12-11T03:09:32.578591+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164ZvQ03692f1gp513PxgPJ ENCSR000DVH https://www.encodeproject.org/experiments/ENCSR000DVH "transcription factor,RNA binding protein" CTCF-human kidney epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF464SZY https://www.encodeproject.org/files/ENCFF464SZY/@@download/ENCFF464SZY.bam ENCFF688ZXI https://www.encodeproject.org/files/ENCFF688ZXI/@@download/ENCFF688ZXI.bam 34.7 M 0 18.7 M 0.539 SE 36 36 native 0.0 M 15.2 M 5.9 M 0.170 0.39 0.33 1.31 130 4.06 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b8bb512-2436-4e03-80a6-ff6f87729507/@@download/cross_correlation_plot/ENCFF001HRM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB440PFT john-stamatoyannopoulos:DS11574-library ENCFF001HRM Illumina Genome Analyzer II 2016-12-11T03:23:10.407251+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164b1Q03690xXYVJ7Fj2f5z ENCSR000DVF https://www.encodeproject.org/experiments/ENCSR000DVF "histone,histone modification,broad histone mark" H3K27me3-human kidney epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF658MNZ https://www.encodeproject.org/files/ENCFF658MNZ/@@download/ENCFF658MNZ.bam ENCFF677PNV https://www.encodeproject.org/files/ENCFF677PNV/@@download/ENCFF677PNV.bam 60.3 M 0 22.8 M 0.379 SE 36 36 native 0.0 M 17.2 M 15.9 M 0.264 0.93 0.93 13.51 195 1.10 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce766730-fc3c-44d1-b46c-7139349020b3/@@download/cross_correlation_plot/ENCFF001FQT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB912PGH john-stamatoyannopoulos:DS12422-library ENCFF001FQT Illumina Genome Analyzer 2016-10-26T17:44:01.624037+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820f803695YX1xgJBKFBYB ENCSR000DVF https://www.encodeproject.org/experiments/ENCSR000DVF "histone,histone modification,broad histone mark" H3K27me3-human kidney epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF575FWP https://www.encodeproject.org/files/ENCFF575FWP/@@download/ENCFF575FWP.bam ENCFF023FOX https://www.encodeproject.org/files/ENCFF023FOX/@@download/ENCFF023FOX.bam 14.1 M 0 13.7 M 0.967 SE 36 36 native 0.0 M 10.5 M 10.1 M 0.717 0.97 0.97 33.09 135 1.05 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/35c7c09b-79b9-4b98-b1a9-9e7039523062/@@download/cross_correlation_plot/ENCFF001FQG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB932HPI john-stamatoyannopoulos:DS12415-library ENCFF001FQG Illumina Genome Analyzer 2016-10-26T17:38:03.101715+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820pj036923z1QYVBPkq2K ENCSR000DVE https://www.encodeproject.org/experiments/ENCSR000DVE "histone,histone modification,broad histone mark" H3K36me3-human kidney epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF852MAO https://www.encodeproject.org/files/ENCFF852MAO/@@download/ENCFF852MAO.bam ENCFF397ULO https://www.encodeproject.org/files/ENCFF397ULO/@@download/ENCFF397ULO.bam 16.4 M 0 15.8 M 0.964 SE 36 36 native 0.0 M 11.6 M 11.3 M 0.689 0.97 0.97 32.78 120 1.04 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/9460fb60-687d-4556-be22-f722444032a9/@@download/cross_correlation_plot/ENCFF001FQW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB701IWP john-stamatoyannopoulos:DS12234-library ENCFF001FQW Illumina Genome Analyzer 2016-10-26T17:37:17.943483+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082P1Q0369PK6yVbxF59b0g ENCSR000DVE https://www.encodeproject.org/experiments/ENCSR000DVE "histone,histone modification,broad histone mark" H3K36me3-human kidney epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF130UJA https://www.encodeproject.org/files/ENCFF130UJA/@@download/ENCFF130UJA.bam ENCFF405EBF https://www.encodeproject.org/files/ENCFF405EBF/@@download/ENCFF405EBF.bam 18.6 M 0 17.6 M 0.946 SE 36 36 native 0.0 M 12.9 M 12.6 M 0.678 0.98 0.98 47.57 105 1.04 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f89ebd2-7df8-47ac-97a6-20633ac6fbf6/@@download/cross_correlation_plot/ENCFF001FQV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB469VWC john-stamatoyannopoulos:DS12418-library ENCFF001FQV Illumina Genome Analyzer 2016-10-26T17:35:55.874108+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082P5003691jJ0BZ9F19V97 ENCSR000DVG https://www.encodeproject.org/experiments/ENCSR000DVG "histone,histone modification,narrow histone mark" H3K4me3-human kidney epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF232GAH https://www.encodeproject.org/files/ENCFF232GAH/@@download/ENCFF232GAH.bam ENCFF483ZJC https://www.encodeproject.org/files/ENCFF483ZJC/@@download/ENCFF483ZJC.bam 30.6 M 0 14.6 M 0.475 SE 36 36 None 0.0 M 12.3 M 10.5 M 0.344 0.86 0.86 7.63 150 3.26 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3173e0d-9b1d-4be6-ba5f-f3256826805a/@@download/cross_correlation_plot/ENCFF001FRB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB201QSM john-stamatoyannopoulos:DS11575-library ENCFF001FRB Illumina Genome Analyzer 2016-08-10T01:14:21.778257+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p9bj036914X4PZVxpP95q ENCSR000DVG https://www.encodeproject.org/experiments/ENCSR000DVG "histone,histone modification,narrow histone mark" H3K4me3-human kidney epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF135UOQ https://www.encodeproject.org/files/ENCFF135UOQ/@@download/ENCFF135UOQ.bam ENCFF406UYE https://www.encodeproject.org/files/ENCFF406UYE/@@download/ENCFF406UYE.bam 17.9 M 0 15.6 M 0.873 SE 36 36 None 0.0 M 13.6 M 11.7 M 0.655 0.86 0.87 8.04 145 3.25 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1d44d49-21bf-4a1b-bd28-d6c840e88833/@@download/cross_correlation_plot/ENCFF001FRG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB829HVC john-stamatoyannopoulos:DS11573-library ENCFF001FRG Illumina Genome Analyzer 2016-08-10T01:13:54.770499+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p9j00369BjkVxP0gkkqPP ENCSR000DWG https://www.encodeproject.org/experiments/ENCSR000DWG control Control-human LNCaP clone FGC immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF805AGC https://www.encodeproject.org/files/ENCFF805AGC/@@download/ENCFF805AGC.bam ENCFF234IPE https://www.encodeproject.org/files/ENCFF234IPE/@@download/ENCFF234IPE.bam 26.3 M 0 26.1 M 0.990 SE 36 36 native 0.0 M 19.5 M 19.4 M 0.735 0.99 0.99 169.99 125 1.01 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7596aec-b289-4aba-b4e9-4c1743dd9d07/@@download/cross_correlation_plot/ENCFF001HUC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB951ZPR john-stamatoyannopoulos:DS18326-library ENCFF001HUC Illumina Genome Analyzer 2016-08-09T16:01:47.913648+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZBfQ0369F97Byg82v2pyX ENCSR000DWF https://www.encodeproject.org/experiments/ENCSR000DWF "histone,histone modification,narrow histone mark" H3K4me3-human LNCaP clone FGC immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF523BIQ https://www.encodeproject.org/files/ENCFF523BIQ/@@download/ENCFF523BIQ.bam ENCFF654UWD https://www.encodeproject.org/files/ENCFF654UWD/@@download/ENCFF654UWD.bam 18.1 M 0 18.0 M 0.992 SE 36 36 None 0.0 M 15.4 M 12.9 M 0.713 0.84 0.85 7.14 210 2.66 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c4dc6f3-016d-4a66-b9cf-924ff007c7bf/@@download/cross_correlation_plot/ENCFF001FXR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB666ROM john-stamatoyannopoulos:DS18330-library ENCFF001FXR Illumina Genome Analyzer 2016-08-10T01:12:54.718025+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pG600369BjkVxP0gkkqVF ENCSR000DWF https://www.encodeproject.org/experiments/ENCSR000DWF "histone,histone modification,narrow histone mark" H3K4me3-human LNCaP clone FGC immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF764ZMJ https://www.encodeproject.org/files/ENCFF764ZMJ/@@download/ENCFF764ZMJ.bam ENCFF313NEK https://www.encodeproject.org/files/ENCFF313NEK/@@download/ENCFF313NEK.bam 21.4 M 0 21.1 M 0.990 SE 36 36 None 0.0 M 18.2 M 15.3 M 0.715 0.84 0.85 7.19 205 2.53 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/f566becc-e74b-4d68-a633-960156149748/@@download/cross_correlation_plot/ENCFF001FXS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB120PVN john-stamatoyannopoulos:DS18329-library ENCFF001FXS Illumina Genome Analyzer 2016-08-10T01:13:25.619638+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pG8j0369561xqZQgj50qB ENCSR000DUR https://www.encodeproject.org/experiments/ENCSR000DUR control Control-human mammary epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF163IHR https://www.encodeproject.org/files/ENCFF163IHR/@@download/ENCFF163IHR.bam ENCFF312QCP https://www.encodeproject.org/files/ENCFF312QCP/@@download/ENCFF312QCP.bam 18.5 M 0 18.1 M 0.982 SE 36 36 native 0.0 M 13.4 M 13.3 M 0.718 0.99 0.99 153.69 55 1.02 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a7c8199-8325-48c5-8f82-1eb3c3c16264/@@download/cross_correlation_plot/ENCFF001HPU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB272MIF john-stamatoyannopoulos:DS13600-library ENCFF001HPU Illumina Genome Analyzer 2016-08-09T16:01:51.443905+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZ9yQ0369J0Bzfkv2XyxQ4 ENCSR000DUS https://www.encodeproject.org/experiments/ENCSR000DUS "transcription factor,RNA binding protein" CTCF-human mammary epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF559BCH https://www.encodeproject.org/files/ENCFF559BCH/@@download/ENCFF559BCH.bam ENCFF932CRC https://www.encodeproject.org/files/ENCFF932CRC/@@download/ENCFF932CRC.bam 36.3 M 0 20.3 M 0.560 SE 36 36 native 0.0 M 16.5 M 13.6 M 0.374 0.82 0.86 9.49 100 4.50 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e42741d-3a06-4cf0-8786-d16bc25b012b/@@download/cross_correlation_plot/ENCFF001HPM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB269VXN john-stamatoyannopoulos:DS11255-library ENCFF001HPM Illumina Genome Analyzer II 2016-12-10T20:44:12.330564+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162gfj03692BKq0F3V3jFQK ENCSR000DUS https://www.encodeproject.org/experiments/ENCSR000DUS "transcription factor,RNA binding protein" CTCF-human mammary epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF346OGN https://www.encodeproject.org/files/ENCFF346OGN/@@download/ENCFF346OGN.bam ENCFF734ZFQ https://www.encodeproject.org/files/ENCFF734ZFQ/@@download/ENCFF734ZFQ.bam 22.7 M 0 17.4 M 0.765 SE 36 36 native 0.0 M 14.1 M 12.5 M 0.549 0.88 0.89 9.08 145 2.71 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f20994f-07ab-40a1-a001-4fcd47cb4b8a/@@download/cross_correlation_plot/ENCFF001HPL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB579VXJ john-stamatoyannopoulos:DS18569-library ENCFF001HPL Illumina Genome Analyzer II 2016-12-10T20:33:55.684861+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162gqQ036969X0jJ6p3ffQb ENCSR000DUT https://www.encodeproject.org/experiments/ENCSR000DUT "histone,histone modification,broad histone mark" H3K27me3-human mammary epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF520NCF https://www.encodeproject.org/files/ENCFF520NCF/@@download/ENCFF520NCF.bam ENCFF684AOQ https://www.encodeproject.org/files/ENCFF684AOQ/@@download/ENCFF684AOQ.bam 29.1 M 0 20.2 M 0.695 SE 36 36 native 0.0 M 14.5 M 5.9 M 0.204 0.41 0.35 1.36 120 1.24 7.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f54ecff-0f64-478b-b2ca-7a72e12f0ac2/@@download/cross_correlation_plot/ENCFF001FOE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB976UAP john-stamatoyannopoulos:DS12082-library ENCFF001FOE Illumina Genome Analyzer 2016-11-11T15:25:49.637360+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xg33803696BZZPjG1pqvq0 ENCSR000DUQ https://www.encodeproject.org/experiments/ENCSR000DUQ "histone,histone modification,narrow histone mark" H3K4me3-human mammary epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF029KZM https://www.encodeproject.org/files/ENCFF029KZM/@@download/ENCFF029KZM.bam ENCFF151WKG https://www.encodeproject.org/files/ENCFF151WKG/@@download/ENCFF151WKG.bam 18.7 M 0 18.0 M 0.963 SE 36 36 None 0.0 M 15.7 M 13.2 M 0.706 0.84 0.85 7.29 130 3.21 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca92d34b-bd37-4a0e-b7ad-aa3e12d34533/@@download/cross_correlation_plot/ENCFF001FOG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB462WZX john-stamatoyannopoulos:DS15762-library ENCFF001FOG Illumina Genome Analyzer 2016-08-10T01:14:47.849097+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6zQ0369BJvqxV5vxVX3k ENCSR000DUQ https://www.encodeproject.org/experiments/ENCSR000DUQ "histone,histone modification,narrow histone mark" H3K4me3-human mammary epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF995CUR https://www.encodeproject.org/files/ENCFF995CUR/@@download/ENCFF995CUR.bam ENCFF245RXM https://www.encodeproject.org/files/ENCFF245RXM/@@download/ENCFF245RXM.bam 25.2 M 0 24.5 M 0.970 SE 36 36 None 0.0 M 21.2 M 17.2 M 0.680 0.81 0.83 6.40 130 2.79 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/03262b01-3183-43bf-870d-8e3d589f70a0/@@download/cross_correlation_plot/ENCFF001FOH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB258ESS john-stamatoyannopoulos:DS15761-library ENCFF001FOH Illumina Genome Analyzer 2016-08-10T01:15:03.396066+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p71j03691gzQyYkvVqVjv ENCSR000DWI https://www.encodeproject.org/experiments/ENCSR000DWI control Control-human MCF-7 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF320ZWB https://www.encodeproject.org/files/ENCFF320ZWB/@@download/ENCFF320ZWB.bam ENCFF623WZZ https://www.encodeproject.org/files/ENCFF623WZZ/@@download/ENCFF623WZZ.bam 32.8 M 0 32.5 M 0.991 SE 36 36 native 0.0 M 25.1 M 24.8 M 0.758 0.99 0.99 145.50 80 1.02 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3c40d24-8fde-487e-919e-67457975d966/@@download/cross_correlation_plot/ENCFF001HUM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB650IAT john-stamatoyannopoulos:DS16198-library ENCFF001HUM Illumina Genome Analyzer 2016-08-09T16:02:23.264997+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZBk00369G0925gv2xQP1b ENCSR000DWH https://www.encodeproject.org/experiments/ENCSR000DWH "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF274JRZ https://www.encodeproject.org/files/ENCFF274JRZ/@@download/ENCFF274JRZ.bam ENCFF608PJC https://www.encodeproject.org/files/ENCFF608PJC/@@download/ENCFF608PJC.bam 28.4 M 0 25.6 M 0.902 SE 36 36 native 0.0 M 20.0 M 18.3 M 0.644 0.91 0.93 15.63 125 1.98 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd3716d7-6e61-4e9d-b8db-4dbab1bf6d91/@@download/cross_correlation_plot/ENCFF001HUG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB180ZCJ john-stamatoyannopoulos:DS16200-library ENCFF001HUG Illumina Genome Analyzer 2016-12-12T17:19:41.039333+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16202j03697vfpg2qKbyZ3b ENCSR000DWH https://www.encodeproject.org/experiments/ENCSR000DWH "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF822LTQ https://www.encodeproject.org/files/ENCFF822LTQ/@@download/ENCFF822LTQ.bam ENCFF803LMD https://www.encodeproject.org/files/ENCFF803LMD/@@download/ENCFF803LMD.bam 32.4 M 0 24.2 M 0.747 SE 36 36 native 0.0 M 19.0 M 17.6 M 0.544 0.93 0.93 15.86 125 1.53 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/3fb84963-872d-47f8-8e37-12454667e30a/@@download/cross_correlation_plot/ENCFF001HUF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB117IDE john-stamatoyannopoulos:DS16199-library ENCFF001HUF Illumina Genome Analyzer 2016-12-12T17:18:06.505136+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1620700369Bxb30J6x5bYqb ENCSR000DWJ https://www.encodeproject.org/experiments/ENCSR000DWJ "histone,histone modification,narrow histone mark" H3K4me3-human MCF-7 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF834UUT https://www.encodeproject.org/files/ENCFF834UUT/@@download/ENCFF834UUT.bam ENCFF597CDV https://www.encodeproject.org/files/ENCFF597CDV/@@download/ENCFF597CDV.bam 35.6 M 0 35.1 M 0.985 SE 36 36 None 0.0 M 28.8 M 25.0 M 0.703 0.87 0.90 11.27 125 1.75 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b5a7e74-571c-4fb9-992a-5c5cb3c0535f/@@download/cross_correlation_plot/ENCFF001FYK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB379DTS john-stamatoyannopoulos:DS16202-library ENCFF001FYK Illumina Genome Analyzer 2016-08-10T01:16:01.027639+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p66803695b8XJVxvzFzbQ ENCSR000DWJ https://www.encodeproject.org/experiments/ENCSR000DWJ "histone,histone modification,narrow histone mark" H3K4me3-human MCF-7 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF912XEA https://www.encodeproject.org/files/ENCFF912XEA/@@download/ENCFF912XEA.bam ENCFF728VNK https://www.encodeproject.org/files/ENCFF728VNK/@@download/ENCFF728VNK.bam 32.5 M 0 32.1 M 0.986 SE 36 36 None 0.0 M 26.3 M 21.6 M 0.664 0.82 0.86 8.11 135 2.07 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/247b555d-678c-4bd3-9fea-a8b03c26a0a6/@@download/cross_correlation_plot/ENCFF001FYE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB202TVA john-stamatoyannopoulos:DS16201-library ENCFF001FYE Illumina Genome Analyzer 2016-08-10T01:15:52.369776+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p68Q03699yPVZfVvxfBXF ENCSR000DWO https://www.encodeproject.org/experiments/ENCSR000DWO control Control-human NB4 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF312FHK https://www.encodeproject.org/files/ENCFF312FHK/@@download/ENCFF312FHK.bam ENCFF504UBQ https://www.encodeproject.org/files/ENCFF504UBQ/@@download/ENCFF504UBQ.bam 32.2 M 0 31.8 M 0.989 SE 36 36 native 0.0 M 24.7 M 24.5 M 0.762 0.99 1.00 212.40 105 1.01 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e3cfbc0-8759-4e95-97b6-fb5b44785140/@@download/cross_correlation_plot/ENCFF001HVB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB033XCI john-stamatoyannopoulos:DS16344-library ENCFF001HVB Illumina Genome Analyzer 2016-08-09T16:02:10.282322+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZBy003691jjxffj2bKqVv ENCSR000DWN https://www.encodeproject.org/experiments/ENCSR000DWN "transcription factor,RNA binding protein" CTCF-human NB4 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF116ICU https://www.encodeproject.org/files/ENCFF116ICU/@@download/ENCFF116ICU.bam ENCFF186DVQ https://www.encodeproject.org/files/ENCFF186DVQ/@@download/ENCFF186DVQ.bam 26.2 M 0 22.5 M 0.858 SE 36 36 native 0.0 M 17.4 M 16.2 M 0.617 0.93 0.93 15.42 120 1.67 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/44bb2f54-fa22-4ebf-a7dd-4e3a66282cf7/@@download/cross_correlation_plot/ENCFF001HUW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB666XYY john-stamatoyannopoulos:DS16345-library ENCFF001HUW Illumina Genome Analyzer 2017-04-09T03:39:43.853486+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkB6j0369620706qfvKgKF ENCSR000DWP https://www.encodeproject.org/experiments/ENCSR000DWP "histone,histone modification,narrow histone mark" H3K4me3-human NB4 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF327XDQ https://www.encodeproject.org/files/ENCFF327XDQ/@@download/ENCFF327XDQ.bam ENCFF575FYQ https://www.encodeproject.org/files/ENCFF575FYQ/@@download/ENCFF575FYQ.bam 28.5 M 0 28.0 M 0.983 SE 36 36 native 0.0 M 24.2 M 18.6 M 0.653 0.77 0.80 6.17 125 2.17 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/01448399-b1bd-46de-86c6-1af3233ba9f9/@@download/cross_correlation_plot/ENCFF001FZD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB845SQF john-stamatoyannopoulos:DS16346-library ENCFF001FZD Illumina Genome Analyzer 2016-08-20T00:47:19.524981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BybZPvj0369JjVqXgZ9JkyYj ENCSR000DXC https://www.encodeproject.org/experiments/ENCSR000DXC control Control-human Panc1 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF737CAX https://www.encodeproject.org/files/ENCFF737CAX/@@download/ENCFF737CAX.bam ENCFF412RVB https://www.encodeproject.org/files/ENCFF412RVB/@@download/ENCFF412RVB.bam 27.4 M 0 27.2 M 0.993 SE 36 36 native 0.0 M 21.2 M 20.9 M 0.764 0.99 0.99 116.30 70 1.01 0.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/f303b150-878a-4df8-8e4b-d64e51ceec56/@@download/cross_correlation_plot/ENCFF001HWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB007ZDE john-stamatoyannopoulos:DS18331-library ENCFF001HWJ Illumina Genome Analyzer 2016-08-09T16:01:53.896704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZF8Q0369BB4PPpG2jBj56 ENCSR000DXB https://www.encodeproject.org/experiments/ENCSR000DXB "histone,histone modification,narrow histone mark" H3K4me3-human Panc1 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF600KMP https://www.encodeproject.org/files/ENCFF600KMP/@@download/ENCFF600KMP.bam ENCFF506OZD https://www.encodeproject.org/files/ENCFF506OZD/@@download/ENCFF506OZD.bam 22.8 M 0 22.5 M 0.984 SE 36 36 None 0.0 M 18.9 M 16.2 M 0.709 0.85 0.87 8.65 175 2.18 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf490eb8-f9b0-40a7-b410-971373b3289b/@@download/cross_correlation_plot/ENCFF001GBW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB497XZB john-stamatoyannopoulos:DS18335-library ENCFF001GBW Illumina Genome Analyzer 2016-08-10T01:15:11.749375+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6Pj0369PxgkxQJvqfQyv ENCSR000DXB https://www.encodeproject.org/experiments/ENCSR000DXB "histone,histone modification,narrow histone mark" H3K4me3-human Panc1 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF024WPY https://www.encodeproject.org/files/ENCFF024WPY/@@download/ENCFF024WPY.bam ENCFF667RJK https://www.encodeproject.org/files/ENCFF667RJK/@@download/ENCFF667RJK.bam 21.4 M 0 21.2 M 0.992 SE 36 36 None 0.0 M 17.7 M 15.6 M 0.730 0.88 0.89 9.86 185 1.88 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/62ead45b-020d-4f45-a41d-1b31dd594e20/@@download/cross_correlation_plot/ENCFF001GBV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB414AAH john-stamatoyannopoulos:DS18334-library ENCFF001GBV Illumina Genome Analyzer 2016-08-10T01:15:40.164821+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6Vj0369BJvqxV5vxVX36 ENCSR000DVJ https://www.encodeproject.org/experiments/ENCSR000DVJ control Control-human retinal pigment epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF419THA https://www.encodeproject.org/files/ENCFF419THA/@@download/ENCFF419THA.bam ENCFF637KZP https://www.encodeproject.org/files/ENCFF637KZP/@@download/ENCFF637KZP.bam 22.0 M 0 21.6 M 0.985 SE 36 36 native 0.0 M 16.8 M 16.6 M 0.758 1.00 1.00 251.04 90 1.01 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/af4892e1-3e95-412b-ba6b-3008443de4c1/@@download/cross_correlation_plot/ENCFF001HSI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB977GFG john-stamatoyannopoulos:DS16014-library ENCFF001HSI Illumina Genome Analyzer 2016-08-09T16:01:35.989131+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZBBj0369FGGBGjG2qk15p ENCSR000DVI https://www.encodeproject.org/experiments/ENCSR000DVI "transcription factor,RNA binding protein" CTCF-human retinal pigment epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF477ASU https://www.encodeproject.org/files/ENCFF477ASU/@@download/ENCFF477ASU.bam ENCFF985XLO https://www.encodeproject.org/files/ENCFF985XLO/@@download/ENCFF985XLO.bam 30.8 M 0 30.0 M 0.974 SE 36 36 native 0.0 M 23.8 M 21.1 M 0.687 0.89 0.91 12.17 110 2.18 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/e65b6270-4033-4a3d-bab6-18d718a3e6a8/@@download/cross_correlation_plot/ENCFF001HSF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB323VYI john-stamatoyannopoulos:DS16187-library ENCFF001HSF Illumina Genome Analyzer II 2016-12-11T02:40:46.617633+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163y280369PvYp91zK1Px7G ENCSR000DVI https://www.encodeproject.org/experiments/ENCSR000DVI "transcription factor,RNA binding protein" CTCF-human retinal pigment epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF720GUI https://www.encodeproject.org/files/ENCFF720GUI/@@download/ENCFF720GUI.bam ENCFF653TBS https://www.encodeproject.org/files/ENCFF653TBS/@@download/ENCFF653TBS.bam 19.8 M 0 17.7 M 0.897 SE 36 36 native 0.0 M 14.1 M 12.8 M 0.645 0.91 0.91 11.92 125 2.47 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/3dc7cdb9-c711-4aaf-be4b-59f873ab0ab7/@@download/cross_correlation_plot/ENCFF001HRY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB464XDK john-stamatoyannopoulos:DS18570-library ENCFF001HRY Illumina Genome Analyzer II 2016-12-11T02:26:17.934416+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163y8803699Z3Y8493qbpzP ENCSR000DVK https://www.encodeproject.org/experiments/ENCSR000DVK "histone,histone modification,narrow histone mark" H3K4me3-human retinal pigment epithelial cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF305AHC https://www.encodeproject.org/files/ENCFF305AHC/@@download/ENCFF305AHC.bam ENCFF646ADI https://www.encodeproject.org/files/ENCFF646ADI/@@download/ENCFF646ADI.bam 30.1 M 0 29.5 M 0.979 SE 36 36 None 0.0 M 25.9 M 20.1 M 0.666 0.77 0.80 5.59 150 2.43 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/36c27d1b-9831-4187-aff1-2f82b53679ed/@@download/cross_correlation_plot/ENCFF001FRU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB758OAG john-stamatoyannopoulos:DS16189-library ENCFF001FRU Illumina Genome Analyzer 2016-08-10T01:14:10.922885+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pF28036914X4PZVxpP96y ENCSR000DVK https://www.encodeproject.org/experiments/ENCSR000DVK "histone,histone modification,narrow histone mark" H3K4me3-human retinal pigment epithelial cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF314ENC https://www.encodeproject.org/files/ENCFF314ENC/@@download/ENCFF314ENC.bam ENCFF568MUU https://www.encodeproject.org/files/ENCFF568MUU/@@download/ENCFF568MUU.bam 28.5 M 0 27.8 M 0.975 SE 36 36 None 0.0 M 23.8 M 19.9 M 0.698 0.84 0.86 7.98 135 2.30 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e9b1c2d-8cb4-40c8-acc0-38133c7f2dd8/@@download/cross_correlation_plot/ENCFF001FRV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB674WGR john-stamatoyannopoulos:DS16188-library ENCFF001FRV Illumina Genome Analyzer 2016-08-10T01:14:33.418398+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pF40036962Q5vYZgxVQFj ENCSR000DXM https://www.encodeproject.org/experiments/ENCSR000DXM control Control-human SK-N-MC immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF854RRT https://www.encodeproject.org/files/ENCFF854RRT/@@download/ENCFF854RRT.bam ENCFF713HLH https://www.encodeproject.org/files/ENCFF713HLH/@@download/ENCFF713HLH.bam 21.8 M 0 21.6 M 0.992 SE 36 36 native 0.0 M 16.6 M 16.1 M 0.738 0.97 0.97 29.51 165 1.01 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ac50e42-be44-4528-8dc5-81b464127b15/@@download/cross_correlation_plot/ENCFF001HXQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB268HFG john-stamatoyannopoulos:DS18341-library ENCFF001HXQ Illumina Genome Analyzer 2016-08-09T16:01:03.121714+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZFQ003696GPBjjv2bkV1v ENCSR000DXL https://www.encodeproject.org/experiments/ENCSR000DXL "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-MC immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF642MDS https://www.encodeproject.org/files/ENCFF642MDS/@@download/ENCFF642MDS.bam ENCFF746GYO https://www.encodeproject.org/files/ENCFF746GYO/@@download/ENCFF746GYO.bam 15.6 M 0 15.3 M 0.979 SE 36 36 None 0.0 M 13.5 M 11.2 M 0.719 0.83 0.84 6.74 195 2.69 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/a693df00-b6a7-4499-b009-1c8eee158bb3/@@download/cross_correlation_plot/ENCFF001GEP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB655NRM john-stamatoyannopoulos:DS18344-library ENCFF001GEP Illumina Genome Analyzer 2016-08-10T01:13:39.183200+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pF6j0369561xqZQgj50pq ENCSR000DXL https://www.encodeproject.org/experiments/ENCSR000DXL "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-MC immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF887PWO https://www.encodeproject.org/files/ENCFF887PWO/@@download/ENCFF887PWO.bam ENCFF446DOB https://www.encodeproject.org/files/ENCFF446DOB/@@download/ENCFF446DOB.bam 14.3 M 0 14.1 M 0.987 SE 36 36 None 0.0 M 11.6 M 10.8 M 0.760 0.94 0.94 17.91 205 2.17 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/6902bcad-0590-4d14-9362-d3a1745b1631/@@download/cross_correlation_plot/ENCFF001GEQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB915FVA john-stamatoyannopoulos:DS18345-library ENCFF001GEQ Illumina Genome Analyzer 2016-08-10T01:13:27.622603+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pF8j036914X4PZVxpP97G ENCSR000DXN https://www.encodeproject.org/experiments/ENCSR000DXN control Control-human SK-N-SH immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF968MUT https://www.encodeproject.org/files/ENCFF968MUT/@@download/ENCFF968MUT.bam ENCFF476JOC https://www.encodeproject.org/files/ENCFF476JOC/@@download/ENCFF476JOC.bam 20.0 M 0 19.6 M 0.983 SE 36 36 native 0.0 M 14.5 M 14.1 M 0.705 0.97 0.97 38.51 115 1.03 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/582da7a5-d9b9-4e87-9056-a5e3d5f6688f/@@download/cross_correlation_plot/ENCFF001HYC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB851IFS john-stamatoyannopoulos:DS11605-library ENCFF001HYC Illumina Genome Analyzer 2016-08-09T16:01:13.518440+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZFXQ0369FGGBGjG2qk16j ENCSR000DXQ https://www.encodeproject.org/experiments/ENCSR000DXQ "transcription factor,RNA binding protein" CTCF-human SK-N-SH immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF893HMO https://www.encodeproject.org/files/ENCFF893HMO/@@download/ENCFF893HMO.bam ENCFF473FSX https://www.encodeproject.org/files/ENCFF473FSX/@@download/ENCFF473FSX.bam 15.8 M 0 14.6 M 0.920 SE 36 36 native 0.0 M 11.8 M 7.9 M 0.500 0.67 0.70 3.48 100 6.25 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/f81ae886-6f48-405d-95ea-e6dd59b88dd9/@@download/cross_correlation_plot/ENCFF001HXT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB061VDM john-stamatoyannopoulos:DS12399-library ENCFF001HXT Illumina Genome Analyzer II 2016-12-10T22:54:14.131683+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163YjQ0369B6ZyvJ8yKQXFJ ENCSR000DXQ https://www.encodeproject.org/experiments/ENCSR000DXQ "transcription factor,RNA binding protein" CTCF-human SK-N-SH immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF531WAL https://www.encodeproject.org/files/ENCFF531WAL/@@download/ENCFF531WAL.bam ENCFF586CMC https://www.encodeproject.org/files/ENCFF586CMC/@@download/ENCFF586CMC.bam 16.8 M 0 16.0 M 0.954 SE 36 36 native 0.0 M 13.0 M 7.5 M 0.448 0.58 0.60 2.46 105 6.35 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/d61e8406-a1b5-43f6-895a-5e5cc1986026/@@download/cross_correlation_plot/ENCFF001HXU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB792XJD john-stamatoyannopoulos:DS12400-library ENCFF001HXU Illumina Genome Analyzer II 2016-12-10T22:54:23.988319+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Yx80369PJ8BP63qf1Fbv ENCSR000DXP https://www.encodeproject.org/experiments/ENCSR000DXP "histone,histone modification,broad histone mark" H3K27me3-human SK-N-SH immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF614FPH https://www.encodeproject.org/files/ENCFF614FPH/@@download/ENCFF614FPH.bam ENCFF298AYN https://www.encodeproject.org/files/ENCFF298AYN/@@download/ENCFF298AYN.bam 13.8 M 0 12.9 M 0.938 SE 36 36 native 0.0 M 9.2 M 8.9 M 0.647 0.97 0.97 37.63 135 1.06 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/93cfffb3-e7f3-4890-b83d-dfcbda77a468/@@download/cross_correlation_plot/ENCFF001GFA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB620VEG john-stamatoyannopoulos:DS12212-library ENCFF001GFA Illumina Genome Analyzer 2016-10-26T17:42:27.955778+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820Jj036923pJJqk9xzYfz ENCSR000DXP https://www.encodeproject.org/experiments/ENCSR000DXP "histone,histone modification,broad histone mark" H3K27me3-human SK-N-SH immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF762NUT https://www.encodeproject.org/files/ENCFF762NUT/@@download/ENCFF762NUT.bam ENCFF828PHQ https://www.encodeproject.org/files/ENCFF828PHQ/@@download/ENCFF828PHQ.bam 19.8 M 0 19.1 M 0.964 SE 36 36 native 0.0 M 13.8 M 13.2 M 0.670 0.96 0.96 24.36 120 1.06 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1036ae7-be82-4ad6-8e29-e176311e0f75/@@download/cross_correlation_plot/ENCFF001GFF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB023YVU john-stamatoyannopoulos:DS12215-library ENCFF001GFF Illumina Genome Analyzer 2016-10-26T17:42:48.998699+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820VQ03697KPkyX9BPPpv0 ENCSR000DXO https://www.encodeproject.org/experiments/ENCSR000DXO "histone,histone modification,broad histone mark" H3K36me3-human SK-N-SH immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF004AOO https://www.encodeproject.org/files/ENCFF004AOO/@@download/ENCFF004AOO.bam ENCFF018ENJ https://www.encodeproject.org/files/ENCFF018ENJ/@@download/ENCFF018ENJ.bam 15.2 M 0 14.9 M 0.980 SE 36 36 native 0.0 M 10.9 M 10.7 M 0.708 0.98 0.98 57.85 110 1.05 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/e63d8fb5-4103-4b34-b99d-bd625258d7d0/@@download/cross_correlation_plot/ENCFF001GFG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB516JKG john-stamatoyannopoulos:DS12404-library ENCFF001GFG Illumina Genome Analyzer 2016-10-26T17:38:20.285337+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820zQ03697KPkyX9BPPpvf ENCSR000DXO https://www.encodeproject.org/experiments/ENCSR000DXO "histone,histone modification,broad histone mark" H3K36me3-human SK-N-SH immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF521IRF https://www.encodeproject.org/files/ENCFF521IRF/@@download/ENCFF521IRF.bam ENCFF523VGB https://www.encodeproject.org/files/ENCFF523VGB/@@download/ENCFF523VGB.bam 14.6 M 0 14.3 M 0.980 SE 36 36 native 0.0 M 10.6 M 10.2 M 0.700 0.97 0.97 31.41 135 1.05 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/fad705eb-dfda-4e90-877f-cce7a22de9f9/@@download/cross_correlation_plot/ENCFF001GFE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB013JHL john-stamatoyannopoulos:DS12403-library ENCFF001GFE Illumina Genome Analyzer 2016-10-26T17:38:36.225906+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082140036923pJJqk9xzYgJ ENCSR000DXR https://www.encodeproject.org/experiments/ENCSR000DXR "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-SH immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF937UPX https://www.encodeproject.org/files/ENCFF937UPX/@@download/ENCFF937UPX.bam ENCFF442NIB https://www.encodeproject.org/files/ENCFF442NIB/@@download/ENCFF442NIB.bam 16.8 M 0 15.9 M 0.943 SE 36 36 None 0.0 M 13.9 M 11.7 M 0.693 0.84 0.85 7.02 155 3.08 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d5dd50f-4b6f-4ff1-9308-9be76aa679f9/@@download/cross_correlation_plot/ENCFF001GFX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB273DOY john-stamatoyannopoulos:DS11782-library ENCFF001GFX Illumina Genome Analyzer 2016-08-10T01:14:40.858026+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p8Zj0369B2VXxG0kKq9bv ENCSR000DXR https://www.encodeproject.org/experiments/ENCSR000DXR "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-SH immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF637KNJ https://www.encodeproject.org/files/ENCFF637KNJ/@@download/ENCFF637KNJ.bam ENCFF896SGQ https://www.encodeproject.org/files/ENCFF896SGQ/@@download/ENCFF896SGQ.bam 17.6 M 0 16.2 M 0.924 SE 36 36 None 0.0 M 14.3 M 11.8 M 0.674 0.83 0.84 6.54 160 3.08 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c89cd1f-829a-420c-a058-99ca1a62dc61/@@download/cross_correlation_plot/ENCFF001GFW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB693GEX john-stamatoyannopoulos:DS11783-library ENCFF001GFW Illumina Genome Analyzer 2016-08-10T01:14:53.144436+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p8g003690yp869jk52gB9 ENCSR000DXS https://www.encodeproject.org/experiments/ENCSR000DXS control Control-human skeletal muscle cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF552ORJ https://www.encodeproject.org/files/ENCFF552ORJ/@@download/ENCFF552ORJ.bam ENCFF421WFD https://www.encodeproject.org/files/ENCFF421WFD/@@download/ENCFF421WFD.bam 26.1 M 0 25.7 M 0.985 SE 36 36 native 0.0 M 19.5 M 19.4 M 0.744 0.99 0.99 203.18 120 1.01 0.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ecc3568-0339-4e3b-a2c7-3634441476f7/@@download/cross_correlation_plot/ENCFF001HXN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB768WAX john-stamatoyannopoulos:DS16208-library ENCFF001HXN Illumina Genome Analyzer 2016-08-09T16:01:17.831077+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZFb00369G0925gv2xQP2B ENCSR000DXT https://www.encodeproject.org/experiments/ENCSR000DXT "histone,histone modification,narrow histone mark" H3K4me3-human skeletal muscle cell primary cell 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF466QFU https://www.encodeproject.org/files/ENCFF466QFU/@@download/ENCFF466QFU.bam ENCFF640UPI https://www.encodeproject.org/files/ENCFF640UPI/@@download/ENCFF640UPI.bam 23.6 M 0 22.9 M 0.971 SE 36 36 None 0.0 M 20.6 M 15.8 M 0.669 0.77 0.78 4.79 180 2.82 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e41601b-14d4-44fd-8801-3e4145e0d963/@@download/cross_correlation_plot/ENCFF001GDW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB006JXF john-stamatoyannopoulos:DS16211-library ENCFF001GDW Illumina Genome Analyzer 2016-08-10T01:14:23.007808+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pB580369BjkVxP0gkkqPv ENCSR000DXT https://www.encodeproject.org/experiments/ENCSR000DXT "histone,histone modification,narrow histone mark" H3K4me3-human skeletal muscle cell primary cell 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF015LGW https://www.encodeproject.org/files/ENCFF015LGW/@@download/ENCFF015LGW.bam ENCFF508OGB https://www.encodeproject.org/files/ENCFF508OGB/@@download/ENCFF508OGB.bam 26.5 M 0 24.6 M 0.929 SE 36 36 None 0.0 M 21.9 M 16.6 M 0.624 0.75 0.77 4.66 175 2.92 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/839f62ee-c85d-49bd-9ba7-22558a42d3b6/@@download/cross_correlation_plot/ENCFF001GEF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB059VCV john-stamatoyannopoulos:DS16212-library ENCFF001GEF Illumina Genome Analyzer 2016-08-10T01:13:59.982832+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pB7Q0369561xqZQgj50p4 ENCSR000DXV https://www.encodeproject.org/experiments/ENCSR000DXV control Control-human WERI-Rb-1 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF497TEA https://www.encodeproject.org/files/ENCFF497TEA/@@download/ENCFF497TEA.bam ENCFF185CQP https://www.encodeproject.org/files/ENCFF185CQP/@@download/ENCFF185CQP.bam 19.5 M 0 19.1 M 0.982 SE 36 36 native 0.0 M 13.9 M 13.6 M 0.699 0.98 0.98 51.29 115 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d4eb398-f4fb-4e71-88e2-739cfc0dd30a/@@download/cross_correlation_plot/ENCFF001HYO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB349KIH john-stamatoyannopoulos:DS11888-library ENCFF001HYO Illumina Genome Analyzer 2016-08-09T16:01:00.648626+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZFgQ0369F97Byg82v2pz3 ENCSR000DXW https://www.encodeproject.org/experiments/ENCSR000DXW "transcription factor,RNA binding protein" CTCF-human WERI-Rb-1 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF633OXE https://www.encodeproject.org/files/ENCFF633OXE/@@download/ENCFF633OXE.bam ENCFF232FBS https://www.encodeproject.org/files/ENCFF232FBS/@@download/ENCFF232FBS.bam 22.7 M 0 14.7 M 0.645 SE 36 36 native 0.0 M 11.7 M 10.0 M 0.439 0.86 0.89 11.01 95 4.31 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/17cedb36-4b93-454b-a09b-d35e2ca025be/@@download/cross_correlation_plot/ENCFF001HYG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB913FTU john-stamatoyannopoulos:DS10701-library ENCFF001HYG Illumina Genome Analyzer II 2016-11-15T05:12:15.733102+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6j9j0369FZF23QQ0jZv96 ENCSR000DXW https://www.encodeproject.org/experiments/ENCSR000DXW "transcription factor,RNA binding protein" CTCF-human WERI-Rb-1 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF925VPT https://www.encodeproject.org/files/ENCFF925VPT/@@download/ENCFF925VPT.bam ENCFF484GTY https://www.encodeproject.org/files/ENCFF484GTY/@@download/ENCFF484GTY.bam 81.1 M 0 18.9 M 0.233 SE 36 36 native 0.0 M 11.4 M 10.3 M 0.127 0.93 0.94 17.94 105 2.31 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/08abe1c0-ec20-4def-8573-e117d8ef553d/@@download/cross_correlation_plot/ENCFF001HYR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB896AWX john-stamatoyannopoulos:DS10408-library ENCFF001HYR Illumina Genome Analyzer II 2016-11-15T05:13:23.918910+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6jXQ0369JbJXk4G78JP13 ENCSR000DXU https://www.encodeproject.org/experiments/ENCSR000DXU "histone,histone modification,narrow histone mark" H3K4me3-human WERI-Rb-1 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF405VAD https://www.encodeproject.org/files/ENCFF405VAD/@@download/ENCFF405VAD.bam ENCFF454PDC https://www.encodeproject.org/files/ENCFF454PDC/@@download/ENCFF454PDC.bam 20.0 M 0 19.8 M 0.988 SE 36 36 None 0.0 M 17.2 M 14.9 M 0.743 0.87 0.88 8.88 180 2.52 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/81478a22-f0be-46ec-bea0-20e94a2e0da0/@@download/cross_correlation_plot/ENCFF001GGK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB852KSP john-stamatoyannopoulos:DS16214-library ENCFF001GGK Illumina Genome Analyzer 2016-08-10T01:13:04.342213+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pGxQ0369561xqZQgj50qj ENCSR000DXU https://www.encodeproject.org/experiments/ENCSR000DXU "histone,histone modification,narrow histone mark" H3K4me3-human WERI-Rb-1 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF470MHM https://www.encodeproject.org/files/ENCFF470MHM/@@download/ENCFF470MHM.bam ENCFF087QKX https://www.encodeproject.org/files/ENCFF087QKX/@@download/ENCFF087QKX.bam 19.4 M 0 19.1 M 0.984 SE 36 36 None 0.0 M 16.6 M 14.6 M 0.753 0.88 0.89 9.78 195 2.51 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/44589c68-cd72-4b95-adf6-026f973474e4/@@download/cross_correlation_plot/ENCFF001GGJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB436NFO john-stamatoyannopoulos:DS16213-library ENCFF001GGJ Illumina Genome Analyzer 2016-08-10T01:13:15.809085+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pGzj036962Q5vYZgxVQJP ENCSR000DXX https://www.encodeproject.org/experiments/ENCSR000DXX control Control-human WI38 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF694ANH https://www.encodeproject.org/files/ENCFF694ANH/@@download/ENCFF694ANH.bam ENCFF041ZZY https://www.encodeproject.org/files/ENCFF041ZZY/@@download/ENCFF041ZZY.bam 25.3 M 0 25.0 M 0.987 SE 36 36 native 0.0 M 19.3 M 19.1 M 0.755 0.99 0.99 123.73 95 1.01 0.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/00f91723-2517-4143-a9a3-ec10f4ffc649/@@download/cross_correlation_plot/ENCFF001HYX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB878ESH john-stamatoyannopoulos:DS18351-library ENCFF001HYX Illumina Genome Analyzer 2016-08-09T16:01:14.587118+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZFp00369BB4PPpG2jBj5Q ENCSR000DYA https://www.encodeproject.org/experiments/ENCSR000DYA control Control-human WI38 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF070KUR https://www.encodeproject.org/files/ENCFF070KUR/@@download/ENCFF070KUR.bam ENCFF036SIR https://www.encodeproject.org/files/ENCFF036SIR/@@download/ENCFF036SIR.bam 17.7 M 0 17.6 M 0.991 SE 36 36 native 0.0 M 13.5 M 12.8 M 0.720 0.94 0.94 17.97 120 1.01 0.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/c167a4a5-9f6a-430a-8aa9-39d9a7d9d7b6/@@download/cross_correlation_plot/ENCFF001HZB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB645IRJ john-stamatoyannopoulos:DS18346-library ENCFF001HZB Illumina Genome Analyzer 2016-08-09T16:00:56.386779+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZFvQ0369FGGBGjG2qk173 ENCSR000DYB https://www.encodeproject.org/experiments/ENCSR000DYB "transcription factor,RNA binding protein" CTCF-human WI38 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF815EOF https://www.encodeproject.org/files/ENCFF815EOF/@@download/ENCFF815EOF.bam ENCFF553KZD https://www.encodeproject.org/files/ENCFF553KZD/@@download/ENCFF553KZD.bam 17.5 M 0 14.9 M 0.852 SE 36 36 native 0.0 M 11.6 M 9.6 M 0.549 0.83 0.82 5.47 140 1.52 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/bee59f70-d9d5-42ac-8909-254277337254/@@download/cross_correlation_plot/ENCFF001HYS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB462WBW john-stamatoyannopoulos:DS18347-library ENCFF001HYS Illumina Genome Analyzer 2016-12-11T03:00:13.511817+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Bq00369GF0YB1zjPf6Y1 ENCSR000DYB https://www.encodeproject.org/experiments/ENCSR000DYB "transcription factor,RNA binding protein" CTCF-human WI38 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF113LQX https://www.encodeproject.org/files/ENCFF113LQX/@@download/ENCFF113LQX.bam ENCFF471BGP https://www.encodeproject.org/files/ENCFF471BGP/@@download/ENCFF471BGP.bam 18.2 M 0 15.7 M 0.860 SE 36 36 native 0.0 M 11.7 M 9.8 M 0.536 0.83 0.83 5.58 150 1.37 2.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3dd57c8-22f6-49f5-b5a5-10045f3d8341/@@download/cross_correlation_plot/ENCFF001HYT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB682ZLE john-stamatoyannopoulos:DS18348-library ENCFF001HYT Illumina Genome Analyzer 2016-12-11T02:59:21.498520+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164BzQ0369BJyPz9fb9qY0V ENCSR000DXY https://www.encodeproject.org/experiments/ENCSR000DXY "histone,histone modification,narrow histone mark" H3K4me3-human WI38 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF645IBT https://www.encodeproject.org/files/ENCFF645IBT/@@download/ENCFF645IBT.bam ENCFF679PPC https://www.encodeproject.org/files/ENCFF679PPC/@@download/ENCFF679PPC.bam 21.0 M 0 20.5 M 0.975 SE 36 36 None 0.0 M 18.1 M 14.9 M 0.707 0.82 0.83 6.44 210 2.48 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/24481c4d-d666-4724-aeea-dfac8bd40eab/@@download/cross_correlation_plot/ENCFF001GGW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB200KHO john-stamatoyannopoulos:DS18355-library ENCFF001GGW Illumina Genome Analyzer 2016-08-10T01:12:49.367200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pK6003695XxB1K8gfxVVX ENCSR000DXY https://www.encodeproject.org/experiments/ENCSR000DXY "histone,histone modification,narrow histone mark" H3K4me3-human WI38 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF928KDH https://www.encodeproject.org/files/ENCFF928KDH/@@download/ENCFF928KDH.bam ENCFF204XIE https://www.encodeproject.org/files/ENCFF204XIE/@@download/ENCFF204XIE.bam 24.9 M 0 24.0 M 0.962 SE 36 36 None 0.0 M 20.9 M 17.3 M 0.692 0.83 0.84 6.93 200 2.38 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/2024a8a4-5de3-4740-ad52-676c3da61f95/@@download/cross_correlation_plot/ENCFF001GGX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB799XHI john-stamatoyannopoulos:DS18354-library ENCFF001GGX Illumina Genome Analyzer 2016-08-10T01:12:56.003466+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pK8Q0369JB9ykPvgzPPZk ENCSR000DXZ https://www.encodeproject.org/experiments/ENCSR000DXZ "histone,histone modification,narrow histone mark" H3K4me3-human WI38 immortalized cell line 1 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF370QUX https://www.encodeproject.org/files/ENCFF370QUX/@@download/ENCFF370QUX.bam ENCFF881CTR https://www.encodeproject.org/files/ENCFF881CTR/@@download/ENCFF881CTR.bam 17.6 M 0 16.5 M 0.939 SE 36 36 None 0.0 M 14.7 M 12.5 M 0.710 0.85 0.85 7.07 190 2.51 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/70572c99-9235-4a3b-994d-da9d668dbd35/@@download/cross_correlation_plot/ENCFF001GGY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB112MTP john-stamatoyannopoulos:DS18350-library ENCFF001GGY Illumina Genome Analyzer 2016-08-10T01:13:16.203118+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJ28036962Q5vYZgxVQJj ENCSR000DXZ https://www.encodeproject.org/experiments/ENCSR000DXZ "histone,histone modification,narrow histone mark" H3K4me3-human WI38 immortalized cell line 2 john-stamatoyannopoulos ENCODE2 GRCh38 ENCFF421JID https://www.encodeproject.org/files/ENCFF421JID/@@download/ENCFF421JID.bam ENCFF077BGH https://www.encodeproject.org/files/ENCFF077BGH/@@download/ENCFF077BGH.bam 17.0 M 0 16.8 M 0.985 SE 36 36 None 0.0 M 14.7 M 12.9 M 0.755 0.87 0.88 8.59 185 2.39 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/dad0fd48-0204-4de8-a97d-17fa89b7317f/@@download/cross_correlation_plot/ENCFF001GHA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB265FRC john-stamatoyannopoulos:DS18349-library ENCFF001GHA Illumina Genome Analyzer 2016-08-10T01:12:52.041167+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7pJ4Q0369JB9ykPvgzPPZ1 ENCSR000DNO https://www.encodeproject.org/experiments/ENCSR000DNO transcription factor KAT2A-human GM12878 immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF881LXX https://www.encodeproject.org/files/ENCFF881LXX/@@download/ENCFF881LXX.bam ENCFF956OHQ https://www.encodeproject.org/files/ENCFF956OHQ/@@download/ENCFF956OHQ.bam 23.7 M 0 20.2 M 0.852 SE 36 28 28 0.0 M 13.4 M 12.8 M 0.539 0.96 0.96 24.35 95 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf95fcbe-cb2e-45d0-a6a6-7b865fc1ec25/@@download/cross_correlation_plot/ENCFF000VWL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYP ENCFF000VWL Illumina Genome Analyzer 2017-01-05T21:18:43.008510+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7z0j03697J9fxG4f90kfQ ENCSR000DNO https://www.encodeproject.org/experiments/ENCSR000DNO transcription factor KAT2A-human GM12878 immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF977FIJ https://www.encodeproject.org/files/ENCFF977FIJ/@@download/ENCFF977FIJ.bam ENCFF581TZP https://www.encodeproject.org/files/ENCFF581TZP/@@download/ENCFF581TZP.bam 21.2 M 0 19.5 M 0.920 SE 36 28 28 0.0 M 13.7 M 12.5 M 0.591 0.92 0.92 12.55 85 1.03 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/0aa772a4-b48f-41ab-93f3-774fdd743129/@@download/cross_correlation_plot/ENCFF000VWM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYO ENCFF000VWM Illumina Genome Analyzer 2017-01-05T21:18:33.509215+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7z5803697J9fxG4f90kfj ENCSR000DNN https://www.encodeproject.org/experiments/ENCSR000DNN transcription factor NFYA-human GM12878 immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF280SUM https://www.encodeproject.org/files/ENCFF280SUM/@@download/ENCFF280SUM.bam ENCFF693TLQ https://www.encodeproject.org/files/ENCFF693TLQ/@@download/ENCFF693TLQ.bam 15.7 M 0 15.2 M 0.969 SE 36 28 28 0.0 M 11.1 M 10.0 M 0.642 0.91 0.90 10.33 170 1.03 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/692d3a08-7da5-4f8f-8632-1be0a77db36d/@@download/cross_correlation_plot/ENCFF000VZR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYH ENCFF000VZR Illumina Genome Analyzer 2017-01-05T21:28:18.724887+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7gKj0369Kbx0VG4x7401f ENCSR000DNN https://www.encodeproject.org/experiments/ENCSR000DNN transcription factor NFYA-human GM12878 immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF595NGV https://www.encodeproject.org/files/ENCFF595NGV/@@download/ENCFF595NGV.bam ENCFF743AGP https://www.encodeproject.org/files/ENCFF743AGP/@@download/ENCFF743AGP.bam 17.3 M 0 16.6 M 0.963 SE 36 28 28 0.0 M 11.7 M 10.4 M 0.600 0.89 0.89 8.92 160 1.06 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/de9ba59e-d50a-4591-981a-31ae41c1b87b/@@download/cross_correlation_plot/ENCFF000VZT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYG ENCFF000VZT Illumina Genome Analyzer 2017-01-05T21:28:19.973930+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7gZ00369PjBfKG4QzQx1P ENCSR000DNM https://www.encodeproject.org/experiments/ENCSR000DNM transcription factor NFYB-human GM12878 immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF347TBE https://www.encodeproject.org/files/ENCFF347TBE/@@download/ENCFF347TBE.bam ENCFF962YKV https://www.encodeproject.org/files/ENCFF962YKV/@@download/ENCFF962YKV.bam 16.6 M 0 16.0 M 0.967 SE 36 28 28 0.0 M 11.7 M 10.0 M 0.600 0.85 0.85 6.87 170 1.20 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e826870-dd9d-45bf-88fd-217a9f5bfeff/@@download/cross_correlation_plot/ENCFF000VZZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYK ENCFF000VZZ Illumina Genome Analyzer 2017-01-05T21:27:55.016846+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7gjj03697J9fxG4f90kYy ENCSR000DNM https://www.encodeproject.org/experiments/ENCSR000DNM transcription factor NFYB-human GM12878 immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF920UGA https://www.encodeproject.org/files/ENCFF920UGA/@@download/ENCFF920UGA.bam ENCFF498VCN https://www.encodeproject.org/files/ENCFF498VCN/@@download/ENCFF498VCN.bam 16.6 M 0 14.8 M 0.889 SE 36 28 28 0.0 M 10.0 M 6.0 M 0.364 0.61 0.64 2.81 165 3.57 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/4eeff462-a05c-4643-951d-80fcc9b815e2/@@download/cross_correlation_plot/ENCFF000WAB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYJ ENCFF000WAB Illumina Genome Analyzer 2017-01-05T21:27:47.540891+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7gxj0369P4Vg0G4JKxZX7 ENCSR000DNP https://www.encodeproject.org/experiments/ENCSR000DNP transcription factor SUPT20H-human GM12878 immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF181CIY https://www.encodeproject.org/files/ENCFF181CIY/@@download/ENCFF181CIY.bam ENCFF364PON https://www.encodeproject.org/files/ENCFF364PON/@@download/ENCFF364PON.bam 30.5 M 0 26.6 M 0.871 SE 36 28 28 0.0 M 18.5 M 14.3 M 0.467 0.78 0.78 4.24 115 1.03 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6739f32-db70-4438-90f6-6951df4d726c/@@download/cross_correlation_plot/ENCFF000WEP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYL ENCFF000WEP Illumina Genome Analyzer 2017-01-05T21:19:02.582596+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7y0803697FPkPG58gbpfg ENCSR000DNP https://www.encodeproject.org/experiments/ENCSR000DNP transcription factor SUPT20H-human GM12878 immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF962QAC https://www.encodeproject.org/files/ENCFF962QAC/@@download/ENCFF962QAC.bam ENCFF701QCB https://www.encodeproject.org/files/ENCFF701QCB/@@download/ENCFF701QCB.bam 32.5 M 0 28.4 M 0.871 SE 36 28 28 0.0 M 19.8 M 16.4 M 0.503 0.85 0.84 6.19 90 1.03 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/672cb652-2b33-4734-8362-77f56ecf74eb/@@download/cross_correlation_plot/ENCFF000WEO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYM ENCFF000WEO Illumina Genome Analyzer 2017-01-05T21:18:35.744205+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7y5j03697J9fxG4f90kf1 ENCSR000DNQ https://www.encodeproject.org/experiments/ENCSR000DNQ transcription factor ZZZ3-human GM12878 immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF240HQW https://www.encodeproject.org/files/ENCFF240HQW/@@download/ENCFF240HQW.bam ENCFF369TPH https://www.encodeproject.org/files/ENCFF369TPH/@@download/ENCFF369TPH.bam 30.4 M 0 23.3 M 0.765 SE 34 28 28 0.0 M 15.4 M 14.7 M 0.482 0.95 0.95 21.57 135 1.02 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/3eb8637d-e2d0-4134-af54-2c17fe110e65/@@download/cross_correlation_plot/ENCFF000WHR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYI ENCFF000WHR Illumina Genome Analyzer 2017-01-05T21:18:53.708903+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7xF003699GG65G542pjbx ENCSR000DNQ https://www.encodeproject.org/experiments/ENCSR000DNQ transcription factor ZZZ3-human GM12878 immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF272UWD https://www.encodeproject.org/files/ENCFF272UWD/@@download/ENCFF272UWD.bam ENCFF038NOW https://www.encodeproject.org/files/ENCFF038NOW/@@download/ENCFF038NOW.bam 26.8 M 0 21.6 M 0.805 SE 34 28 28 0.0 M 14.1 M 13.5 M 0.504 0.96 0.96 23.03 120 1.04 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/760a63e5-73c7-4fbe-bc8f-90dd2848ffe5/@@download/cross_correlation_plot/ENCFF000WHO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JYN ENCFF000WHO Illumina Genome Analyzer 2017-01-05T21:18:46.981177+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7xQQ03699GG65G542pjf5 ENCSR000DNX https://www.encodeproject.org/experiments/ENCSR000DNX transcription factor BDP1-human HeLa-S3 immortalized cell line kevin-struhl ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000DNW https://www.encodeproject.org/experiments/ENCSR000DNW transcription factor BRF1-human HeLa-S3 immortalized cell line kevin-struhl ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000DNV https://www.encodeproject.org/experiments/ENCSR000DNV transcription factor BRF2-human HeLa-S3 immortalized cell line kevin-struhl ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000DNY https://www.encodeproject.org/experiments/ENCSR000DNY transcription factor GTF3C2-human HeLa-S3 immortalized cell line kevin-struhl ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000DNS https://www.encodeproject.org/experiments/ENCSR000DNS transcription factor NFYA-human HeLa-S3 immortalized cell line kevin-struhl ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000DNR https://www.encodeproject.org/experiments/ENCSR000DNR transcription factor NFYB-human HeLa-S3 immortalized cell line kevin-struhl ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000DNU https://www.encodeproject.org/experiments/ENCSR000DNU transcription factor POLR3A-human HeLa-S3 immortalized cell line kevin-struhl ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000DNT https://www.encodeproject.org/experiments/ENCSR000DNT transcription factor ZZZ3-human HeLa-S3 immortalized cell line kevin-struhl ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000DNZ https://www.encodeproject.org/experiments/ENCSR000DNZ transcription factor ATF1-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000DOG https://www.encodeproject.org/experiments/ENCSR000DOG transcription factor ATF3-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000DOK https://www.encodeproject.org/experiments/ENCSR000DOK transcription factor BDP1-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000DOJ https://www.encodeproject.org/experiments/ENCSR000DOJ transcription factor BRF1-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000DOC https://www.encodeproject.org/experiments/ENCSR000DOC transcription factor BRF2-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000DOA https://www.encodeproject.org/experiments/ENCSR000DOA transcription factor CCNT2-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE "27,36" Illumina Genome Analyzer unreviewed ENCSR000DOE https://www.encodeproject.org/experiments/ENCSR000DOE transcription factor GTF2B-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000DOD https://www.encodeproject.org/experiments/ENCSR000DOD transcription factor GTF3C2-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000DOB https://www.encodeproject.org/experiments/ENCSR000DOB transcription factor HMGN3-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE "27,36" Illumina Genome Analyzer unreviewed ENCSR000DOF https://www.encodeproject.org/experiments/ENCSR000DOF RNA binding protein NELFE-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000DOI https://www.encodeproject.org/experiments/ENCSR000DOI transcription factor POLR3A-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000DOH https://www.encodeproject.org/experiments/ENCSR000DOH transcription factor SIRT6-human K562 immortalized cell line kevin-struhl ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000DOL https://www.encodeproject.org/experiments/ENCSR000DOL control Control-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF252KTP https://www.encodeproject.org/files/ENCFF252KTP/@@download/ENCFF252KTP.bam ENCFF942DSY https://www.encodeproject.org/files/ENCFF942DSY/@@download/ENCFF942DSY.bam 174.0 M 0 172.5 M 0.991 SE 36 36 native 0.0 M 136.9 M 123.1 M 0.707 0.91 0.91 11.51 -5 1.03 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/3bf4eb72-5cb2-4a93-ba9e-f8836b5b9496/@@download/cross_correlation_plot/ENCFF000ZIF-ENCFF000ZIB-ENCFF000ZIH-ENCFF000ZID-ENCFF000ZIJ-ENCFF000ZHZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWA "ENCFF000ZID,ENCFF000ZHZ,ENCFF000ZIH,ENCFF000ZIF,ENCFF000ZIJ,ENCFF000ZIB" Illumina Genome Analyzer 2016-10-26T17:43:03.513257+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082ZP003694qqQFPkFPzygb ENCSR000DOV https://www.encodeproject.org/experiments/ENCSR000DOV control Control-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF279UJI https://www.encodeproject.org/files/ENCFF279UJI/@@download/ENCFF279UJI.bam ENCFF407LPR https://www.encodeproject.org/files/ENCFF407LPR/@@download/ENCFF407LPR.bam 30.3 M 0 27.2 M 0.899 SE 36 36 native 0.0 M 21.3 M 20.8 M 0.685 0.98 0.98 52.14 -5 1.04 7.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/619574ab-15ec-4035-93e1-7f28d2ed822d/@@download/cross_correlation_plot/ENCFF000ZIT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB696FZC ENCFF000ZIT Illumina Genome Analyzer 2016-10-26T17:38:01.248221+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08217j03699pQzk2JB6K7kf ENCSR000DOW https://www.encodeproject.org/experiments/ENCSR000DOW control Control-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF018JOG https://www.encodeproject.org/files/ENCFF018JOG/@@download/ENCFF018JOG.bam ENCFF497USM https://www.encodeproject.org/files/ENCFF497USM/@@download/ENCFF497USM.bam 27.9 M 0 25.1 M 0.900 SE 36 36 native 0.0 M 19.6 M 19.0 M 0.678 0.98 0.98 56.09 -5 1.04 6.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/65e62aef-e599-490e-9aa5-12f0e8105726/@@download/cross_correlation_plot/ENCFF000ZIS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB330CST ENCFF000ZIS Illumina Genome Analyzer 2016-10-26T17:37:32.892150+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0828Gj03695YX1xgJBKFF56 ENCSR000DOY https://www.encodeproject.org/experiments/ENCSR000DOY control Control-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF120GKA https://www.encodeproject.org/files/ENCFF120GKA/@@download/ENCFF120GKA.bam ENCFF858VPI https://www.encodeproject.org/files/ENCFF858VPI/@@download/ENCFF858VPI.bam 71.5 M 0 63.2 M 0.884 SE 36 36 native 0.0 M 49.4 M 42.7 M 0.597 0.87 0.88 7.91 0 1.04 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf57a4a4-b37b-4074-b588-37f87e87dd46/@@download/cross_correlation_plot/ENCFF000ZIZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB783LDE ENCFF000ZIZ Illumina Genome Analyzer 2016-10-26T17:45:58.221573+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820600369FFbbzvx9jvvgx ENCSR000DOR https://www.encodeproject.org/experiments/ENCSR000DOR transcription factor E2F4-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF085JZC https://www.encodeproject.org/files/ENCFF085JZC/@@download/ENCFF085JZC.bam ENCFF603MQD https://www.encodeproject.org/files/ENCFF603MQD/@@download/ENCFF603MQD.bam 32.9 M 0 31.6 M 0.963 SE 36 36 native 0.0 M 25.0 M 16.5 M 0.501 0.66 0.65 2.68 160 1.46 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/c19dab85-b6c2-4d8e-a17e-8b876ea8a104/@@download/cross_correlation_plot/ENCFF000ZHO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWG ENCFF000ZHO Illumina Genome Analyzer 2016-12-11T04:55:48.991984+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1666Fj0369BgG8x1ygv1XbY ENCSR000DOR https://www.encodeproject.org/experiments/ENCSR000DOR transcription factor E2F4-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF112RYO https://www.encodeproject.org/files/ENCFF112RYO/@@download/ENCFF112RYO.bam ENCFF533QJL https://www.encodeproject.org/files/ENCFF533QJL/@@download/ENCFF533QJL.bam 29.1 M 0 27.5 M 0.946 SE 36 36 native 0.0 M 22.2 M 13.2 M 0.453 0.60 0.57 2.05 165 1.25 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7be8a7f-35f1-4c10-aa20-1cf2fc83c2bd/@@download/cross_correlation_plot/ENCFF000ZHQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWF ENCFF000ZHQ Illumina Genome Analyzer 2016-12-11T04:53:26.411275+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1666V003693J2XX63yZ7Fqj ENCSR000DON https://www.encodeproject.org/experiments/ENCSR000DON transcription factor FOS-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF014BMO https://www.encodeproject.org/files/ENCFF014BMO/@@download/ENCFF014BMO.bam ENCFF822ESO https://www.encodeproject.org/files/ENCFF822ESO/@@download/ENCFF822ESO.bam 26.9 M 0 25.4 M 0.946 SE 36 36 native 0.0 M 20.4 M 15.7 M 0.584 0.77 0.78 4.41 125 1.63 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/acbad55a-4d67-4b40-a5ee-d5ec722be99b/@@download/cross_correlation_plot/ENCFF000ZGR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWJ ENCFF000ZGR Illumina Genome Analyzer 2016-12-11T04:10:03.653234+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165G6j0369GF0YB1zjPf6xV ENCSR000DON https://www.encodeproject.org/experiments/ENCSR000DON transcription factor FOS-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF098DSP https://www.encodeproject.org/files/ENCFF098DSP/@@download/ENCFF098DSP.bam ENCFF155YHS https://www.encodeproject.org/files/ENCFF155YHS/@@download/ENCFF155YHS.bam 33.2 M 0 31.8 M 0.959 SE 36 36 native 0.0 M 25.6 M 22.8 M 0.686 0.89 0.90 10.91 130 1.49 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8e4d286-c9e2-4235-a8db-a579a6175467/@@download/cross_correlation_plot/ENCFF000ZGT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWL ENCFF000ZGT Illumina Genome Analyzer 2016-12-11T04:24:15.306157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165GFj03696z7JqGk4Yzy8k ENCSR000DOO https://www.encodeproject.org/experiments/ENCSR000DOO transcription factor FOS-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF639ZZI https://www.encodeproject.org/files/ENCFF639ZZI/@@download/ENCFF639ZZI.bam ENCFF300AKV https://www.encodeproject.org/files/ENCFF300AKV/@@download/ENCFF300AKV.bam 34.6 M 0 33.9 M 0.980 SE 36 36 native 0.0 M 29.0 M 23.1 M 0.667 0.80 0.88 11.12 95 1.50 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/9007b885-b5e7-4c7c-8d95-ae70cb2652fc/@@download/cross_correlation_plot/ENCFF000ZGI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWN ENCFF000ZGI Illumina Genome Analyzer 2016-12-12T17:17:55.321291+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1622500369GF0YB1zjPf6G4 ENCSR000DOO https://www.encodeproject.org/experiments/ENCSR000DOO transcription factor FOS-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF034OHU https://www.encodeproject.org/files/ENCFF034OHU/@@download/ENCFF034OHU.bam ENCFF358BAO https://www.encodeproject.org/files/ENCFF358BAO/@@download/ENCFF358BAO.bam 36.1 M 0 35.5 M 0.985 SE 36 36 native 0.0 M 30.1 M 24.0 M 0.666 0.80 0.85 7.99 105 1.37 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/848e804d-ce11-43ad-8f09-1435bbdba0ad/@@download/cross_correlation_plot/ENCFF000ZGK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWO ENCFF000ZGK Illumina Genome Analyzer 2016-12-12T17:17:45.276064+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16229Q03699Z3Y8493qbkzx ENCSR000DOP https://www.encodeproject.org/experiments/ENCSR000DOP transcription factor FOS-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF767TQD https://www.encodeproject.org/files/ENCFF767TQD/@@download/ENCFF767TQD.bam ENCFF113LOR https://www.encodeproject.org/files/ENCFF113LOR/@@download/ENCFF113LOR.bam 32.3 M 0 31.8 M 0.985 SE 36 36 native 0.0 M 27.2 M 21.4 M 0.663 0.79 0.88 12.08 95 1.61 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/4947eb66-1056-4c9e-b07e-7dde82fd44f1/@@download/cross_correlation_plot/ENCFF000ZGA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWE ENCFF000ZGA Illumina Genome Analyzer 2016-12-11T04:03:53.152187+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1650k80369PJ8BP63qf1Fj9 ENCSR000DOP https://www.encodeproject.org/experiments/ENCSR000DOP transcription factor FOS-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF761HTF https://www.encodeproject.org/files/ENCFF761HTF/@@download/ENCFF761HTF.bam ENCFF993UTJ https://www.encodeproject.org/files/ENCFF993UTJ/@@download/ENCFF993UTJ.bam 34.4 M 0 33.9 M 0.987 SE 36 36 native 0.0 M 29.0 M 23.0 M 0.670 0.80 0.87 9.69 115 1.47 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/6aea3c55-c401-4236-93a8-fc923c2794a1/@@download/cross_correlation_plot/ENCFF000ZGC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWD ENCFF000ZGC Illumina Genome Analyzer 2016-12-11T04:06:44.701047+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1650y803697yz601ypVJ3XK ENCSR000DOT https://www.encodeproject.org/experiments/ENCSR000DOT transcription factor FOS-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF021BPF https://www.encodeproject.org/files/ENCFF021BPF/@@download/ENCFF021BPF.bam ENCFF660RHF https://www.encodeproject.org/files/ENCFF660RHF/@@download/ENCFF660RHF.bam 31.2 M 0 29.2 M 0.938 SE 36 36 native 0.0 M 23.8 M 19.5 M 0.624 0.82 0.84 6.83 120 1.58 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b03d6b7-4274-4bb4-874c-df978ef05c82/@@download/cross_correlation_plot/ENCFF000ZFS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWY ENCFF000ZFS Illumina Genome Analyzer 2016-12-10T23:19:54.410776+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163FV003692pJ09J76g5fyj ENCSR000DOT https://www.encodeproject.org/experiments/ENCSR000DOT transcription factor FOS-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF242CZF https://www.encodeproject.org/files/ENCFF242CZF/@@download/ENCFF242CZF.bam ENCFF004QLH https://www.encodeproject.org/files/ENCFF004QLH/@@download/ENCFF004QLH.bam 19.5 M 0 18.4 M 0.942 SE 36 36 native 0.0 M 15.5 M 11.3 M 0.577 0.73 0.77 4.65 120 2.23 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/c99c4e62-42a3-40ed-bf58-79ab8f7c2aac/@@download/cross_correlation_plot/ENCFF000ZFW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWX ENCFF000ZFW Illumina Genome Analyzer 2016-12-10T21:40:17.004251+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Fbj03692pJ09J76g5fz1 ENCSR000DOM https://www.encodeproject.org/experiments/ENCSR000DOM transcription factor MYC-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF492UVJ https://www.encodeproject.org/files/ENCFF492UVJ/@@download/ENCFF492UVJ.bam ENCFF716TUR https://www.encodeproject.org/files/ENCFF716TUR/@@download/ENCFF716TUR.bam 28.6 M 0 27.3 M 0.954 SE 36 36 native 0.0 M 22.3 M 17.8 M 0.623 0.80 0.80 4.78 160 1.16 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/baa99933-12e3-406c-82d9-a6ae87cc7572/@@download/cross_correlation_plot/ENCFF000ZHG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWQ ENCFF000ZHG Illumina Genome Analyzer 2016-12-10T20:43:58.960041+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162kP80369BJyPz9fb9qXvX ENCSR000DOM https://www.encodeproject.org/experiments/ENCSR000DOM transcription factor MYC-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF585XCU https://www.encodeproject.org/files/ENCFF585XCU/@@download/ENCFF585XCU.bam ENCFF576YUK https://www.encodeproject.org/files/ENCFF576YUK/@@download/ENCFF576YUK.bam 36.1 M 0 33.9 M 0.940 SE 36 36 native 0.0 M 27.7 M 23.5 M 0.651 0.85 0.85 6.66 -5 1.10 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8bf99e2-781d-45ce-88e7-f0d820d25ad7/@@download/cross_correlation_plot/ENCFF000ZHI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWP ENCFF000ZHI Illumina Genome Analyzer 2016-12-10T20:55:42.295905+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162kZQ03695Kj1j8qPQgkGK ENCSR000DOS https://www.encodeproject.org/experiments/ENCSR000DOS transcription factor MYC-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF188YIC https://www.encodeproject.org/files/ENCFF188YIC/@@download/ENCFF188YIC.bam ENCFF880OQN https://www.encodeproject.org/files/ENCFF880OQN/@@download/ENCFF880OQN.bam 22.8 M 0 19.9 M 0.871 SE 36 36 native 0.0 M 16.2 M 11.0 M 0.483 0.68 0.68 2.93 160 1.49 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/30e15154-3105-4777-9f6d-b42b291bffa7/@@download/cross_correlation_plot/ENCFF000ZHA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWR ENCFF000ZHA Illumina Genome Analyzer 2016-12-11T02:16:57.158875+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163q3803692yykb1zBpz7YZ ENCSR000DOS https://www.encodeproject.org/experiments/ENCSR000DOS transcription factor MYC-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF010YAL https://www.encodeproject.org/files/ENCFF010YAL/@@download/ENCFF010YAL.bam ENCFF327MCF https://www.encodeproject.org/files/ENCFF327MCF/@@download/ENCFF327MCF.bam 26.5 M 0 24.6 M 0.931 SE 36 36 native 0.0 M 19.9 M 16.3 M 0.614 0.82 0.82 5.26 160 1.20 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2ceafc2-01f9-4914-bda1-7a1a631d0b37/@@download/cross_correlation_plot/ENCFF000ZHC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWS ENCFF000ZHC Illumina Genome Analyzer 2016-12-11T02:22:12.926791+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163q8003697K4B1J71pxzv1 ENCSR000DPA https://www.encodeproject.org/experiments/ENCSR000DPA transcription factor POLR2A-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF606LJM https://www.encodeproject.org/files/ENCFF606LJM/@@download/ENCFF606LJM.bam ENCFF097ZOZ https://www.encodeproject.org/files/ENCFF097ZOZ/@@download/ENCFF097ZOZ.bam 37.0 M 0 32.1 M 0.869 SE 36 36 native 0.0 M 25.5 M 17.6 M 0.476 0.69 0.70 3.18 165 1.57 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc7650c9-3d24-4eb5-ae8a-5567f8dabdc5/@@download/cross_correlation_plot/ENCFF000ZJA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWV ENCFF000ZJA Illumina Genome Analyzer 2016-12-10T21:09:41.520020+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1632X00369Bxb30J6x5bZ45 ENCSR000DPA https://www.encodeproject.org/experiments/ENCSR000DPA transcription factor POLR2A-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF276UEG https://www.encodeproject.org/files/ENCFF276UEG/@@download/ENCFF276UEG.bam ENCFF777DCM https://www.encodeproject.org/files/ENCFF777DCM/@@download/ENCFF777DCM.bam 32.2 M 0 28.6 M 0.888 SE 36 36 native 0.0 M 22.7 M 14.4 M 0.447 0.64 0.63 2.47 170 1.97 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/daf6f523-4754-479a-9a98-ef3873a4ee69/@@download/cross_correlation_plot/ENCFF000ZIY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWT ENCFF000ZIY Illumina Genome Analyzer 2016-12-10T21:01:46.439130+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1632fj03697vfpg2qKbyZB1 ENCSR000DPC https://www.encodeproject.org/experiments/ENCSR000DPC transcription factor POLR2A-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF587SXK https://www.encodeproject.org/files/ENCFF587SXK/@@download/ENCFF587SXK.bam ENCFF272ZRF https://www.encodeproject.org/files/ENCFF272ZRF/@@download/ENCFF272ZRF.bam 35.3 M 0 31.2 M 0.884 SE 36 36 native 0.0 M 24.1 M 12.9 M 0.365 0.54 0.50 1.72 170 1.77 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/c808765a-1349-4939-9423-a9addbf3e3d2/@@download/cross_correlation_plot/ENCFF000ZJG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWM ENCFF000ZJG Illumina Genome Analyzer 2016-12-11T02:35:19.206052+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163xG803699K237J9jY9kf2 ENCSR000DPC https://www.encodeproject.org/experiments/ENCSR000DPC transcription factor POLR2A-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF381LYV https://www.encodeproject.org/files/ENCFF381LYV/@@download/ENCFF381LYV.bam ENCFF865WIG https://www.encodeproject.org/files/ENCFF865WIG/@@download/ENCFF865WIG.bam 33.8 M 0 29.9 M 0.883 SE 36 36 native 0.0 M 23.0 M 13.4 M 0.396 0.58 0.56 2.02 175 1.91 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a6a69de-ce81-4984-8835-889be07aa4a0/@@download/cross_correlation_plot/ENCFF000ZJH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWK ENCFF000ZJH Illumina Genome Analyzer 2016-12-11T02:35:33.439469+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163xV803692pJ09J76g5g3G ENCSR000DOQ https://www.encodeproject.org/experiments/ENCSR000DOQ transcription factor STAT3-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF073LRR https://www.encodeproject.org/files/ENCFF073LRR/@@download/ENCFF073LRR.bam ENCFF125UGM https://www.encodeproject.org/files/ENCFF125UGM/@@download/ENCFF125UGM.bam 21.2 M 0 19.4 M 0.917 SE 36 36 native 0.0 M 15.8 M 12.4 M 0.584 0.78 0.82 5.89 120 1.56 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/da57cd25-4d54-448a-ae7e-2b428a40ae0d/@@download/cross_correlation_plot/ENCFF000ZJW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWB ENCFF000ZJW Illumina Genome Analyzer 2016-12-10T21:09:56.911046+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1635xQ03692pJ09J76g5fvp ENCSR000DOQ https://www.encodeproject.org/experiments/ENCSR000DOQ transcription factor STAT3-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF608DCE https://www.encodeproject.org/files/ENCFF608DCE/@@download/ENCFF608DCE.bam ENCFF391PIR https://www.encodeproject.org/files/ENCFF391PIR/@@download/ENCFF391PIR.bam 15.7 M 0 14.4 M 0.917 SE 36 36 native 0.0 M 12.1 M 9.3 M 0.594 0.77 0.82 5.89 115 1.85 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/af778703-dacc-4aad-b429-16ecd690c031/@@download/cross_correlation_plot/ENCFF000ZJY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWC ENCFF000ZJY Illumina Genome Analyzer 2016-12-10T20:59:53.283670+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16362Q03695F8Bk64ff0712 ENCSR000DOZ https://www.encodeproject.org/experiments/ENCSR000DOZ transcription factor STAT3-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF886GDS https://www.encodeproject.org/files/ENCFF886GDS/@@download/ENCFF886GDS.bam ENCFF794DIL https://www.encodeproject.org/files/ENCFF794DIL/@@download/ENCFF794DIL.bam 19.7 M 0 16.0 M 0.812 SE 36 36 native 0.0 M 12.2 M 6.8 M 0.347 0.56 0.52 1.86 140 1.36 3.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/51032e9b-531f-4734-900e-dff16575d6e0/@@download/cross_correlation_plot/ENCFF000ZJP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWW ENCFF000ZJP Illumina Genome Analyzer 2016-12-11T03:00:18.910149+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164FPQ0369KQ3Yk1yz1kgQ4 ENCSR000DOZ https://www.encodeproject.org/experiments/ENCSR000DOZ transcription factor STAT3-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF724XQV https://www.encodeproject.org/files/ENCFF724XQV/@@download/ENCFF724XQV.bam ENCFF255VQY https://www.encodeproject.org/files/ENCFF255VQY/@@download/ENCFF255VQY.bam 34.1 M 0 29.6 M 0.870 SE 36 36 native 0.0 M 23.1 M 11.8 M 0.347 0.52 0.45 1.50 165 1.29 4.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b6ef7e3-e30e-4d7d-97ad-ce6066f862e7/@@download/cross_correlation_plot/ENCFF000ZJQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWU ENCFF000ZJQ Illumina Genome Analyzer 2016-12-11T03:13:04.295873+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164FZQ0369BJyPz9fb9qY0v ENCSR000DPB https://www.encodeproject.org/experiments/ENCSR000DPB transcription factor STAT3-human MCF 10A immortalized cell line 1 kevin-struhl ENCODE2 GRCh38 ENCFF151ZPA https://www.encodeproject.org/files/ENCFF151ZPA/@@download/ENCFF151ZPA.bam ENCFF723SOI https://www.encodeproject.org/files/ENCFF723SOI/@@download/ENCFF723SOI.bam 25.1 M 0 19.9 M 0.795 SE 36 36 native 0.0 M 16.3 M 9.9 M 0.394 0.61 0.60 2.42 135 3.93 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2561bed-ef67-40eb-86c9-9c5e9bb6c243/@@download/cross_correlation_plot/ENCFF000ZKX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWI ENCFF000ZKX Illumina Genome Analyzer 2016-12-10T17:46:16.528562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162G2Q03696Kk1YFv8qy50B ENCSR000DPB https://www.encodeproject.org/experiments/ENCSR000DPB transcription factor STAT3-human MCF 10A immortalized cell line 2 kevin-struhl ENCODE2 GRCh38 ENCFF943XYH https://www.encodeproject.org/files/ENCFF943XYH/@@download/ENCFF943XYH.bam ENCFF617KBU https://www.encodeproject.org/files/ENCFF617KBU/@@download/ENCFF617KBU.bam 39.8 M 0 33.3 M 0.837 SE 36 36 native 0.0 M 25.9 M 17.9 M 0.449 0.69 0.68 2.94 165 1.46 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/24e78c89-8f74-4692-90a5-074b15469ebc/@@download/cross_correlation_plot/ENCFF000ZKY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB119JWH ENCFF000ZKY Illumina Genome Analyzer 2016-12-10T19:10:09.942526+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162G7Q0369BJyPz9fb9qVZY ENCSR000DKC https://www.encodeproject.org/experiments/ENCSR000DKC control Control-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF244GCJ https://www.encodeproject.org/files/ENCFF244GCJ/@@download/ENCFF244GCJ.bam ENCFF686CFO https://www.encodeproject.org/files/ENCFF686CFO/@@download/ENCFF686CFO.bam 29.0 M 0 27.8 M 0.958 SE 36 36 native 0.0 M 21.2 M 20.5 M 0.708 0.97 0.97 40.04 90 1.02 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0c02e81-3aac-4b87-9b0a-1fd280669523/@@download/cross_correlation_plot/ENCFF000ZXU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB821RMK ENCFF000ZXU Illumina Genome Analyzer II 2016-08-23T23:10:39.671394+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByxxjJj0369KpQj5g14zXzXg ENCSR000DKD https://www.encodeproject.org/experiments/ENCSR000DKD control Control-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF464ZQT https://www.encodeproject.org/files/ENCFF464ZQT/@@download/ENCFF464ZQT.bam ENCFF767IHT https://www.encodeproject.org/files/ENCFF767IHT/@@download/ENCFF767IHT.bam 16.6 M 0 16.2 M 0.976 SE 36 36 native 0.0 M 12.4 M 11.9 M 0.713 0.96 0.96 26.03 140 1.03 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/94ee4a71-b409-4552-8294-c78d338a6d48/@@download/cross_correlation_plot/ENCFF000ZWC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB922HWW ENCFF000ZWC Illumina Genome Analyzer II 2016-08-23T23:07:25.059125+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byxxjg80369BxVjp8xpP8g3F ENCSR000DKD https://www.encodeproject.org/experiments/ENCSR000DKD control Control-human K562 immortalized cell line 3 kevin-white ENCODE2 GRCh38 ENCFF945IIQ https://www.encodeproject.org/files/ENCFF945IIQ/@@download/ENCFF945IIQ.bam ENCFF579HDO https://www.encodeproject.org/files/ENCFF579HDO/@@download/ENCFF579HDO.bam 25.2 M 0 23.6 M 0.937 SE 36 36 native 0.0 M 18.0 M 17.3 M 0.687 0.97 0.97 32.29 110 1.10 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6078898-5f10-4a14-ad9c-635aff273a25/@@download/cross_correlation_plot/ENCFF000ZWA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB224KBG ENCFF000ZWA Illumina Genome Analyzer II 2016-08-23T23:07:30.839467+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByxxjpQ03693k6FYG5p1fY0b ENCSR000DKE https://www.encodeproject.org/experiments/ENCSR000DKE control Control-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF783MVR https://www.encodeproject.org/files/ENCFF783MVR/@@download/ENCFF783MVR.bam ENCFF251NRU https://www.encodeproject.org/files/ENCFF251NRU/@@download/ENCFF251NRU.bam 18.9 M 0 18.5 M 0.974 SE 36 36 native 0.0 M 14.3 M 13.5 M 0.712 0.95 0.95 20.09 145 1.04 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/844abb6f-a7b0-483b-98f2-8bd6977b929d/@@download/cross_correlation_plot/ENCFF000ZVZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB302AXF ENCFF000ZVZ Illumina Genome Analyzer II 2016-10-26T17:35:32.989567+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Q10036923pJJqk9xzYzQ ENCSR000DKF https://www.encodeproject.org/experiments/ENCSR000DKF control Control-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF683DQU https://www.encodeproject.org/files/ENCFF683DQU/@@download/ENCFF683DQU.bam ENCFF815TQT https://www.encodeproject.org/files/ENCFF815TQT/@@download/ENCFF815TQT.bam 32.5 M 0 31.0 M 0.951 SE 36 36 native 0.0 M 23.3 M 21.1 M 0.648 0.91 0.91 11.00 150 1.03 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e5b4012-8bdf-4639-8fc4-068e8c986a8f/@@download/cross_correlation_plot/ENCFF000ZVV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB027HBA ENCFF000ZVV Illumina Genome Analyzer II 2016-08-23T23:09:55.572568+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByxxjQQ0369BxVjp8xpP8g2j ENCSR000DKG https://www.encodeproject.org/experiments/ENCSR000DKG control Control-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF510BRO https://www.encodeproject.org/files/ENCFF510BRO/@@download/ENCFF510BRO.bam ENCFF293JKT https://www.encodeproject.org/files/ENCFF293JKT/@@download/ENCFF293JKT.bam 32.9 M 0 30.8 M 0.938 SE 36 36 native 0.0 M 23.3 M 20.2 M 0.615 0.87 0.86 7.16 160 1.03 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a57a402-5530-4028-bdca-1b127e5b2e4f/@@download/cross_correlation_plot/ENCFF000ZVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB478ZPF ENCFF000ZVP Illumina Genome Analyzer II 2016-08-23T23:08:01.484963+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByxxjZ803696724QGxpGG66Y ENCSR000DKH https://www.encodeproject.org/experiments/ENCSR000DKH control Control-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF611KVY https://www.encodeproject.org/files/ENCFF611KVY/@@download/ENCFF611KVY.bam ENCFF809XCQ https://www.encodeproject.org/files/ENCFF809XCQ/@@download/ENCFF809XCQ.bam 19.6 M 0 18.9 M 0.964 SE 36 36 native 0.0 M 14.5 M 13.7 M 0.696 0.95 0.95 21.92 120 1.04 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/eaaab864-3d60-47aa-8759-884c9212031d/@@download/cross_correlation_plot/ENCFF000ZVI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB629QIF ENCFF000ZVI Illumina Genome Analyzer II 2016-08-23T23:11:13.947082+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byxxj7Q0369461Yg79pB0Gpy ENCSR000DKH https://www.encodeproject.org/experiments/ENCSR000DKH control Control-human K562 immortalized cell line 3 kevin-white ENCODE2 GRCh38 ENCFF789BCM https://www.encodeproject.org/files/ENCFF789BCM/@@download/ENCFF789BCM.bam ENCFF165SMR https://www.encodeproject.org/files/ENCFF165SMR/@@download/ENCFF165SMR.bam 16.5 M 0 16.0 M 0.967 SE 36 36 native 0.0 M 12.0 M 11.8 M 0.712 0.98 0.98 71.52 90 1.05 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d7a53fb-4055-496f-8305-6b68ec3170f4/@@download/cross_correlation_plot/ENCFF000ZVL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB221YCU ENCFF000ZVL Illumina Genome Analyzer II 2016-08-23T23:10:12.403313+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByxxjBQ03693k6FYG5p1fXzz ENCSR017CYU https://www.encodeproject.org/experiments/ENCSR017CYU control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF699KKU https://www.encodeproject.org/files/ENCFF699KKU/@@download/ENCFF699KKU.bam ENCFF947YCZ https://www.encodeproject.org/files/ENCFF947YCZ/@@download/ENCFF947YCZ.bam 47.4 M 0 45.8 M 0.967 SE 50 50 None 0.0 M 36.9 M 34.0 M 0.719 0.98 0.99 67.38 75 1.02 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/3478db3b-b65f-420e-8ef0-03737dee73d1/@@download/cross_correlation_plot/ENCFF459OWK-ENCFF500SYJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB890OGJ kevin-white:2015-1589 "ENCFF500SYJ,ENCFF459OWK" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:15:32.690432+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq4kj0369KZ2f0V02x0x5X ENCSR018OYI https://www.encodeproject.org/experiments/ENCSR018OYI control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF330GSW https://www.encodeproject.org/files/ENCFF330GSW/@@download/ENCFF330GSW.bam ENCFF612TGS https://www.encodeproject.org/files/ENCFF612TGS/@@download/ENCFF612TGS.bam 52.4 M 0 51.4 M 0.981 SE 50 None 0.0 M 42.1 M 39.7 M 0.758 0.99 0.99 123.91 85 1.02 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2a5fbb8-872e-4e0a-a63e-962d0bcecaed/@@download/cross_correlation_plot/ENCFF673IEY-ENCFF530PGY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB160EJZ kevin-white:2016-166 "ENCFF530PGY,ENCFF673IEY" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:15:24.506700+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq4v003698j0F9Y02x8yBP ENCSR021JFW https://www.encodeproject.org/experiments/ENCSR021JFW control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF093MXU https://www.encodeproject.org/files/ENCFF093MXU/@@download/ENCFF093MXU.bam ENCFF899NVB https://www.encodeproject.org/files/ENCFF899NVB/@@download/ENCFF899NVB.bam 22.7 M 0 22.2 M 0.981 SE 50 50 None 0.0 M 18.1 M 17.0 M 0.749 0.99 0.99 147.18 60 1.02 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7ad8577-6a98-4acd-90b3-a2cca2c5f44f/@@download/cross_correlation_plot/ENCFF422UWG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB438MYG kevin-white:2015-2358 ENCFF422UWG HiSeq 2500 2016-05-06T18:14:43.166940+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq51j03698y99Jpv2z4xgG ENCSR039ZBB https://www.encodeproject.org/experiments/ENCSR039ZBB control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF036ZLP https://www.encodeproject.org/files/ENCFF036ZLP/@@download/ENCFF036ZLP.bam ENCFF813AFS https://www.encodeproject.org/files/ENCFF813AFS/@@download/ENCFF813AFS.bam 45.8 M 0 44.6 M 0.974 SE 50 50 None 0.0 M 36.0 M 33.8 M 0.737 0.99 0.99 104.40 80 1.02 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5e9fc7d-2c2f-4ad1-9ac0-4abda77e3aed/@@download/cross_correlation_plot/ENCFF446PVB-ENCFF455LJL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB821RYB kevin-white:2015-2361 "ENCFF446PVB,ENCFF455LJL" HiSeq 2500 2016-05-06T18:15:07.142690+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq54Q03694jxB2kj2zb3xv ENCSR068GPE https://www.encodeproject.org/experiments/ENCSR068GPE control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF230BZG https://www.encodeproject.org/files/ENCFF230BZG/@@download/ENCFF230BZG.bam ENCFF189AOD https://www.encodeproject.org/files/ENCFF189AOD/@@download/ENCFF189AOD.bam 63.5 M 0 62.3 M 0.981 PE 100 100 native 27.0 M 0.0 M 20.6 M 0.648 0.77 0.77 4.27 210 1.08 6.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecb4de76-272b-48a3-867f-3de34ffc1885/@@download/cross_correlation_plot/ENCFF445KUNENCFF091IYB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB958BDW peggy-farnham:ZNF507_INPUT-library "ENCFF445KUN,ENCFF091IYB" HiSeq 4000 2017-02-09T16:14:20.987415+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2Jf9xQ03692KV8V5YZZ15vq ENCSR121MVZ https://www.encodeproject.org/experiments/ENCSR121MVZ control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF635ZZS https://www.encodeproject.org/files/ENCFF635ZZS/@@download/ENCFF635ZZS.bam ENCFF384QXX https://www.encodeproject.org/files/ENCFF384QXX/@@download/ENCFF384QXX.bam 34.6 M 0 33.4 M 0.967 SE 50 50 None 0.0 M 27.3 M 25.8 M 0.745 0.98 0.98 64.47 70 1.02 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/60ca8334-c96f-42bd-a18d-22a5563dd7b8/@@download/cross_correlation_plot/ENCFF387LKO-ENCFF184BAC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB830XEU kevin-white:2015-3262 "ENCFF387LKO,ENCFF184BAC" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:14:22.093589+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq6Z00369GXx3gz82ZfkGg ENCSR150XYW https://www.encodeproject.org/experiments/ENCSR150XYW control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF115YFR https://www.encodeproject.org/files/ENCFF115YFR/@@download/ENCFF115YFR.bam ENCFF486KWH https://www.encodeproject.org/files/ENCFF486KWH/@@download/ENCFF486KWH.bam 35.9 M 0 35.2 M 0.982 SE 50 50 None 0.0 M 29.3 M 27.8 M 0.776 0.99 0.99 86.90 170 1.03 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ebc35f3-bba2-4e31-a8de-7e2bc45ecbf7/@@download/cross_correlation_plot/ENCFF159WTO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB715DBM kevin-white:2016-169 ENCFF159WTO HiSeq 2500 2016-05-06T18:14:15.884300+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq70j0369KxBGXx02XFFYk ENCSR212RMP https://www.encodeproject.org/experiments/ENCSR212RMP control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF299GMC https://www.encodeproject.org/files/ENCFF299GMC/@@download/ENCFF299GMC.bam ENCFF552MZR https://www.encodeproject.org/files/ENCFF552MZR/@@download/ENCFF552MZR.bam 32.7 M 0 31.9 M 0.976 SE 50 50 None 0.0 M 26.2 M 25.2 M 0.771 0.99 0.99 107.16 100 1.03 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/706ca4c9-a662-4067-ade0-c77841409a72/@@download/cross_correlation_plot/ENCFF861SAD-ENCFF212LBE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB860TNQ kevin-white:2015-2665 "ENCFF861SAD,ENCFF212LBE" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:14:05.216059+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq88803690j2jgp42pQ2g0 ENCSR257TKE https://www.encodeproject.org/experiments/ENCSR257TKE control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF322EZT https://www.encodeproject.org/files/ENCFF322EZT/@@download/ENCFF322EZT.bam ENCFF818PFV https://www.encodeproject.org/files/ENCFF818PFV/@@download/ENCFF818PFV.bam 22.7 M 0 22.3 M 0.982 SE 50 50 None 0.0 M 18.4 M 18.1 M 0.796 1.00 1.00 273.65 100 1.01 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9c66faa-c0da-450a-9ab9-aa884e6f3295/@@download/cross_correlation_plot/ENCFF838XWS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB323JXY kevin-white:2015-1773 ENCFF838XWS HiSeq 2500 2016-05-06T18:13:27.940018+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq9Yj03691Q4QQpZ2q8BFg ENCSR281WXF https://www.encodeproject.org/experiments/ENCSR281WXF control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF993ZUS https://www.encodeproject.org/files/ENCFF993ZUS/@@download/ENCFF993ZUS.bam ENCFF161WBJ https://www.encodeproject.org/files/ENCFF161WBJ/@@download/ENCFF161WBJ.bam 35.4 M 0 34.8 M 0.984 SE 50 50 None 0.0 M 28.7 M 27.3 M 0.771 0.99 0.99 110.05 80 1.02 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/86d43b41-2648-4323-b7db-5354712cc431/@@download/cross_correlation_plot/ENCFF754LQQ-ENCFF390HYY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB808SBV kevin-white:2015-2668 "ENCFF754LQQ,ENCFF390HYY" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:14:01.572931+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqB28036961GyjjQ2QP8G2 ENCSR311ULL https://www.encodeproject.org/experiments/ENCSR311ULL control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF159FKZ https://www.encodeproject.org/files/ENCFF159FKZ/@@download/ENCFF159FKZ.bam ENCFF218JCZ https://www.encodeproject.org/files/ENCFF218JCZ/@@download/ENCFF218JCZ.bam 54.6 M 0 52.9 M 0.970 SE 50 50 None 0.0 M 42.7 M 39.6 M 0.725 0.99 0.99 80.24 130 1.03 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ea392cf-6f53-46b0-8d1d-bf9590b1470f/@@download/cross_correlation_plot/ENCFF322SHV-ENCFF617CIJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB483DXU kevin-white:2015-3156 "ENCFF322SHV,ENCFF617CIJ" HiSeq 2500 2016-05-06T18:14:20.899256+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqBfj036929FJGg42Xq1p6 ENCSR362FFL https://www.encodeproject.org/experiments/ENCSR362FFL control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF967YTY https://www.encodeproject.org/files/ENCFF967YTY/@@download/ENCFF967YTY.bam ENCFF097EJG https://www.encodeproject.org/files/ENCFF097EJG/@@download/ENCFF097EJG.bam 41.5 M 0 40.8 M 0.982 SE 50 50 None 0.0 M 33.6 M 31.5 M 0.758 0.99 0.99 105.38 155 1.03 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad7052c7-4f0f-4d9c-af7e-7e5baec425d4/@@download/cross_correlation_plot/ENCFF043SJU-ENCFF268CSZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB239ZHN kevin-white:2016-163 "ENCFF268CSZ,ENCFF043SJU" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:16:46.198763+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqFkj03690j2jgp42pQ2qy ENCSR414HEF https://www.encodeproject.org/experiments/ENCSR414HEF control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF568OMP https://www.encodeproject.org/files/ENCFF568OMP/@@download/ENCFF568OMP.bam ENCFF351MPC https://www.encodeproject.org/files/ENCFF351MPC/@@download/ENCFF351MPC.bam 34.6 M 0 33.8 M 0.975 SE 50 50 None 0.0 M 27.9 M 26.6 M 0.769 0.99 0.99 115.61 90 1.02 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3a471ce-f85e-4394-beb6-a354982d5471/@@download/cross_correlation_plot/ENCFF278ATS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB361LGY kevin-white:2016-384 ENCFF278ATS HiSeq 2500 2016-05-06T18:12:54.859651+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGp803692Fy2Pk02vGVGk ENCSR418YQO https://www.encodeproject.org/experiments/ENCSR418YQO control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF067XXK https://www.encodeproject.org/files/ENCFF067XXK/@@download/ENCFF067XXK.bam ENCFF777XVN https://www.encodeproject.org/files/ENCFF777XVN/@@download/ENCFF777XVN.bam 27.4 M 0 26.9 M 0.981 SE 50 50 None 0.0 M 22.3 M 21.7 M 0.791 0.99 0.99 147.21 70 1.02 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2a21916-d602-4d3e-b196-bed602781ece/@@download/cross_correlation_plot/ENCFF182AZA-ENCFF623AGS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB017CIY kevin-white:2015-1491 "ENCFF182AZA,ENCFF623AGS" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:13:03.496151+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGv803692Fy2Pk02vGVJ2 ENCSR420JAH https://www.encodeproject.org/experiments/ENCSR420JAH control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF756KAA https://www.encodeproject.org/files/ENCFF756KAA/@@download/ENCFF756KAA.bam ENCFF114PMK https://www.encodeproject.org/files/ENCFF114PMK/@@download/ENCFF114PMK.bam 37.7 M 0 36.9 M 0.980 SE 50 50 None 0.0 M 29.8 M 28.9 M 0.767 0.99 0.99 135.15 105 1.01 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/49e4155c-d977-4973-8945-349e65d6bf2c/@@download/cross_correlation_plot/ENCFF044EPS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB492SKV kevin-white:2016-530 ENCFF044EPS HiSeq 2000 2016-05-06T18:12:40.694118+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGy003691Q4QQpZ2q8BVZ ENCSR500VBE https://www.encodeproject.org/experiments/ENCSR500VBE control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF874TOY https://www.encodeproject.org/files/ENCFF874TOY/@@download/ENCFF874TOY.bam ENCFF814ZGP https://www.encodeproject.org/files/ENCFF814ZGP/@@download/ENCFF814ZGP.bam 82.1 M 0 80.0 M 0.974 PE 100 100 native 34.4 M 0.0 M 27.3 M 0.666 0.81 0.81 5.19 190 1.06 6.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/720fa10c-8a1f-4b7f-9ece-3949bdb22e17/@@download/cross_correlation_plot/ENCFF437UBYENCFF337NMZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB449XJZ peggy-farnham:ZNF354B_INPUT-library "ENCFF337NMZ,ENCFF437UBY" HiSeq 4000 2017-02-09T16:15:49.087990+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2JfB0j03698zvbP5Y4P5b6Z ENCSR529YPZ https://www.encodeproject.org/experiments/ENCSR529YPZ control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF256EBS https://www.encodeproject.org/files/ENCFF256EBS/@@download/ENCFF256EBS.bam ENCFF112DPE https://www.encodeproject.org/files/ENCFF112DPE/@@download/ENCFF112DPE.bam 44.8 M 0 43.6 M 0.973 SE 50 50 native 0.0 M 35.6 M 33.8 M 0.754 0.99 0.99 81.76 70 1.03 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/d43b7e04-d376-46b3-82eb-e36ea2d55bea/@@download/cross_correlation_plot/ENCFF959MSU-ENCFF996NMH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB819FVH kevin-white:2015-3260 "ENCFF959MSU,ENCFF996NMH" HiSeq 2500 2016-08-30T17:49:38.709548+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3Kj03692K69zFxG22kPV ENCSR556FBD https://www.encodeproject.org/experiments/ENCSR556FBD control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF795UVG https://www.encodeproject.org/files/ENCFF795UVG/@@download/ENCFF795UVG.bam ENCFF523OOS https://www.encodeproject.org/files/ENCFF523OOS/@@download/ENCFF523OOS.bam 49.1 M 0 47.7 M 0.971 SE 50 50 None 0.0 M 38.5 M 36.8 M 0.749 0.98 0.98 59.90 175 1.02 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/d85964c4-2c07-4de5-b28a-ea24de60d4b0/@@download/cross_correlation_plot/ENCFF414HWA-ENCFF894RGF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB495JCV kevin-white:2015-1675 "ENCFF414HWA,ENCFF894RGF" HiSeq 2500 2016-05-06T18:11:46.266714+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqPJj036986q4kkQ2Q0KYV ENCSR606XES https://www.encodeproject.org/experiments/ENCSR606XES control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF604MCA https://www.encodeproject.org/files/ENCFF604MCA/@@download/ENCFF604MCA.bam ENCFF646GDE https://www.encodeproject.org/files/ENCFF646GDE/@@download/ENCFF646GDE.bam 24.7 M 0 24.2 M 0.981 SE 50 50 None 0.0 M 20.1 M 19.3 M 0.782 0.99 0.99 144.86 70 1.02 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/31477807-4ecb-4437-8939-cc9e82f3214e/@@download/cross_correlation_plot/ENCFF373VKP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB363TXM kevin-white:2015-2645 ENCFF373VKP HiSeq 2000 2016-05-06T18:08:50.615566+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQX0036961GyjjQ2QP8Y5 ENCSR625UIZ https://www.encodeproject.org/experiments/ENCSR625UIZ control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF791OAY https://www.encodeproject.org/files/ENCFF791OAY/@@download/ENCFF791OAY.bam ENCFF079VNU https://www.encodeproject.org/files/ENCFF079VNU/@@download/ENCFF079VNU.bam 24.6 M 0 23.7 M 0.965 SE 50 50 native 0.0 M 19.4 M 18.0 M 0.731 0.98 0.98 49.29 135 1.02 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/5afa0e2b-eb3f-460d-80ae-59c9de9dc226/@@download/cross_correlation_plot/ENCFF877XOV-ENCFF563LVJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB711UGZ kevin-white:2015-2674 "ENCFF563LVJ,ENCFF877XOV" "HiSeq 2000,HiSeq 2500" 2016-08-30T17:48:21.153551+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ4600369BQ7VQPxBqP1Qp ENCSR672RME https://www.encodeproject.org/experiments/ENCSR672RME control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF156EWJ https://www.encodeproject.org/files/ENCFF156EWJ/@@download/ENCFF156EWJ.bam ENCFF796GJW https://www.encodeproject.org/files/ENCFF796GJW/@@download/ENCFF796GJW.bam 23.3 M 0 23.0 M 0.984 SE 50 50 None 0.0 M 19.0 M 18.2 M 0.782 0.99 0.99 101.86 85 1.02 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7a76b63-66e6-4c0e-9da2-35558b74924c/@@download/cross_correlation_plot/ENCFF728HNA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB732YNR kevin-white:2015-2639 ENCFF728HNA HiSeq 2000 2016-05-06T18:07:16.242203+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqX080369GkFPvq42zg1kq ENCSR675JUK https://www.encodeproject.org/experiments/ENCSR675JUK control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF383YOE https://www.encodeproject.org/files/ENCFF383YOE/@@download/ENCFF383YOE.bam ENCFF312KEY https://www.encodeproject.org/files/ENCFF312KEY/@@download/ENCFF312KEY.bam 29.2 M 0 28.6 M 0.980 SE 50 50 None 0.0 M 23.3 M 22.0 M 0.754 0.99 0.99 115.86 155 1.02 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3d868b1-6129-429f-bab5-f94521991977/@@download/cross_correlation_plot/ENCFF564OXD-ENCFF422MHT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB582MXR kevin-white:2015-1602 "ENCFF564OXD,ENCFF422MHT" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:07:41.051676+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqX280369PPK4xgv2b79K3 ENCSR745QMZ https://www.encodeproject.org/experiments/ENCSR745QMZ control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF711KPW https://www.encodeproject.org/files/ENCFF711KPW/@@download/ENCFF711KPW.bam ENCFF535KOQ https://www.encodeproject.org/files/ENCFF535KOQ/@@download/ENCFF535KOQ.bam 76.8 M 0 75.3 M 0.982 SE 50 50 native 0.0 M 61.9 M 59.5 M 0.775 0.99 0.99 90.60 120 1.02 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7c8730b-5e8b-47b0-9141-aebc8e2a0032/@@download/cross_correlation_plot/ENCFF330MJC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB827GLA kevin-white:2015-3261 ENCFF330MJC HiSeq 2500 2016-08-30T17:50:45.529788+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ43003695qVFpfJBXYkKV ENCSR765SXU https://www.encodeproject.org/experiments/ENCSR765SXU control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF358ZBU https://www.encodeproject.org/files/ENCFF358ZBU/@@download/ENCFF358ZBU.bam ENCFF178URB https://www.encodeproject.org/files/ENCFF178URB/@@download/ENCFF178URB.bam 14.2 M 0 14.0 M 0.982 SE 50 None 0.0 M 11.4 M 10.9 M 0.769 0.99 0.99 156.69 90 1.02 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/fef4e63c-d9b3-429a-8e9c-3dcf253dc927/@@download/cross_correlation_plot/ENCFF890NEW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB222SOQ kevin-white:2015-2822 ENCFF890NEW HiSeq 2000 2016-05-06T18:03:05.691737+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqZ2j03691Q4QQpZ2q8Bkp ENCSR814CUB https://www.encodeproject.org/experiments/ENCSR814CUB control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF623HUN https://www.encodeproject.org/files/ENCFF623HUN/@@download/ENCFF623HUN.bam ENCFF789BWF https://www.encodeproject.org/files/ENCFF789BWF/@@download/ENCFF789BWF.bam 48.5 M 0 47.0 M 0.968 SE 50 50 None 0.0 M 37.7 M 34.0 M 0.701 0.99 0.99 74.32 80 1.02 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b721564-afd1-4dc7-aae0-7bbf2ef6de1b/@@download/cross_correlation_plot/ENCFF144MPP-ENCFF299IIG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB262NKS kevin-white:2016-381 "ENCFF144MPP,ENCFF299IIG" HiSeq 2500 2016-05-06T18:04:25.393002+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqbg803690j2jgp42pQ362 ENCSR822DUK https://www.encodeproject.org/experiments/ENCSR822DUK control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF679QYP https://www.encodeproject.org/files/ENCFF679QYP/@@download/ENCFF679QYP.bam ENCFF436BHQ https://www.encodeproject.org/files/ENCFF436BHQ/@@download/ENCFF436BHQ.bam 51.8 M 0 50.9 M 0.983 SE 50 50 None 0.0 M 42.2 M 41.1 M 0.794 0.99 0.99 118.95 70 1.01 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/63ba0c1c-d625-4f62-abee-e4500bd7dfb5/@@download/cross_correlation_plot/ENCFF679OFG-ENCFF485ZYJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB596NLN kevin-white:2015-1882 "ENCFF485ZYJ,ENCFF679OFG" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:04:20.602386+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqf1j03691Q4QQpZ2q8Bqq ENCSR825KUF https://www.encodeproject.org/experiments/ENCSR825KUF control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF037PYE https://www.encodeproject.org/files/ENCFF037PYE/@@download/ENCFF037PYE.bam ENCFF271VSQ https://www.encodeproject.org/files/ENCFF271VSQ/@@download/ENCFF271VSQ.bam 58.7 M 0 57.5 M 0.980 SE 50 None 0.0 M 47.4 M 45.4 M 0.773 0.99 0.99 84.35 105 1.01 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb14aefe-b7e5-4d6f-a781-4e1ca998e740/@@download/cross_correlation_plot/ENCFF348XCG-ENCFF726JBF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB340WHX kevin-white:2015-1876 "ENCFF348XCG,ENCFF726JBF" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:04:42.864427+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqf5Q036929FJGg42Xq289 ENCSR828WYU https://www.encodeproject.org/experiments/ENCSR828WYU control Control-human K562 immortalized cell line 1 kevin-white ENCODE2 GRCh38 ENCFF240RBJ https://www.encodeproject.org/files/ENCFF240RBJ/@@download/ENCFF240RBJ.bam ENCFF522EPY https://www.encodeproject.org/files/ENCFF522EPY/@@download/ENCFF522EPY.bam 24.2 M 0 23.9 M 0.988 SE 36 36 native 0.0 M 17.7 M 17.0 M 0.705 0.96 0.96 27.64 255 1.02 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e5ce3a1-2029-4864-97cf-b069706ca702/@@download/cross_correlation_plot/ENCFF000ZVJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB457NMG ENCFF000ZVJ Illumina Genome Analyzer II 2016-10-26T17:37:03.427669+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827qj0369BqVfYq19ZB8zk ENCSR829NNQ https://www.encodeproject.org/experiments/ENCSR829NNQ control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF321YGO https://www.encodeproject.org/files/ENCFF321YGO/@@download/ENCFF321YGO.bam ENCFF414ROR https://www.encodeproject.org/files/ENCFF414ROR/@@download/ENCFF414ROR.bam 28.0 M 0 27.4 M 0.976 SE 50 50 None 0.0 M 22.7 M 21.5 M 0.766 0.99 0.99 85.09 70 1.03 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f250914-9d72-4578-8f2d-c9c88cfd1333/@@download/cross_correlation_plot/ENCFF864QSY-ENCFF647SGY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB755WZK kevin-white:2016-172 "ENCFF864QSY,ENCFF647SGY" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:04:12.476623+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqfJ00369GkFPvq42zg1xZ ENCSR845MXF https://www.encodeproject.org/experiments/ENCSR845MXF control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF609HLC https://www.encodeproject.org/files/ENCFF609HLC/@@download/ENCFF609HLC.bam ENCFF229TUB https://www.encodeproject.org/files/ENCFF229TUB/@@download/ENCFF229TUB.bam 51.0 M 0 50.0 M 0.982 SE 50 50 None 0.0 M 40.1 M 36.5 M 0.715 0.98 0.98 49.64 165 1.04 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/15b7bfd7-20fa-4596-9043-8c06f195d6c8/@@download/cross_correlation_plot/ENCFF165PUN-ENCFF080EHD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB034SSH kevin-white:2015-1501 "ENCFF080EHD,ENCFF165PUN" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:03:41.199307+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqfjj036986q4kkQ2Q0Kqx ENCSR849DZW https://www.encodeproject.org/experiments/ENCSR849DZW control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF228COG https://www.encodeproject.org/files/ENCFF228COG/@@download/ENCFF228COG.bam ENCFF326TAE https://www.encodeproject.org/files/ENCFF326TAE/@@download/ENCFF326TAE.bam 58.0 M 0 56.7 M 0.977 SE 50 50 None 0.0 M 46.8 M 45.3 M 0.780 0.99 0.99 84.63 70 1.02 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/48e79cc6-a425-4cfe-b941-a3c186058575/@@download/cross_correlation_plot/ENCFF406IWG-ENCFF552UHO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB506CVR kevin-white:2015-1772 "ENCFF406IWG,ENCFF552UHO" HiSeq 2500 2016-05-06T18:04:04.471605+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqfq803690j2jgp42pQ378 ENCSR861LKS https://www.encodeproject.org/experiments/ENCSR861LKS control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF758WOL https://www.encodeproject.org/files/ENCFF758WOL/@@download/ENCFF758WOL.bam ENCFF895FSD https://www.encodeproject.org/files/ENCFF895FSD/@@download/ENCFF895FSD.bam 25.0 M 0 24.5 M 0.979 SE 50 50 native 0.0 M 20.2 M 19.8 M 0.789 0.99 0.99 198.37 110 1.02 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb3047d7-7c02-4374-a21a-08cf995ba942/@@download/cross_correlation_plot/ENCFF748FSB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB659SFI kevin-white:2015-1770 ENCFF748FSB HiSeq 2500 2016-08-30T17:51:54.407258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2pQ03695qVFpfJBXYkJK ENCSR911VTL https://www.encodeproject.org/experiments/ENCSR911VTL control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF493VPN https://www.encodeproject.org/files/ENCFF493VPN/@@download/ENCFF493VPN.bam ENCFF836DZG https://www.encodeproject.org/files/ENCFF836DZG/@@download/ENCFF836DZG.bam 54.0 M 0 53.0 M 0.980 SE 50 50 None 0.0 M 43.6 M 41.3 M 0.764 0.99 0.99 109.89 75 1.02 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/daf08e73-3684-4f7c-8cbf-2a4e571ec6ee/@@download/cross_correlation_plot/ENCFF656LJN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB924PQQ kevin-white:2016-387 ENCFF656LJN HiSeq 2500 2016-05-06T18:05:00.290229+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqjG0036929FJGg42Xq29y ENCSR943AOR https://www.encodeproject.org/experiments/ENCSR943AOR control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF465FJI https://www.encodeproject.org/files/ENCFF465FJI/@@download/ENCFF465FJI.bam ENCFF964VYJ https://www.encodeproject.org/files/ENCFF964VYJ/@@download/ENCFF964VYJ.bam 18.4 M 0 17.9 M 0.977 SE 50 50 None 0.0 M 14.4 M 13.6 M 0.738 0.99 0.99 95.80 155 1.02 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/05867059-e71c-4e43-bd68-e792b0902e74/@@download/cross_correlation_plot/ENCFF532RGH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB930BTK kevin-white:2016-527 ENCFF532RGH HiSeq 2000 2016-05-06T18:02:11.236889+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqk180369GkFPvq42zg1zf ENCSR969FPP https://www.encodeproject.org/experiments/ENCSR969FPP control Control-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF274BOZ https://www.encodeproject.org/files/ENCFF274BOZ/@@download/ENCFF274BOZ.bam ENCFF368AFY https://www.encodeproject.org/files/ENCFF368AFY/@@download/ENCFF368AFY.bam 53.1 M 0 49.5 M 0.932 SE 50 50 None 0.0 M 39.1 M 36.8 M 0.694 0.98 0.98 45.67 -5 1.01 0.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f11c9a8-8b00-42d6-adb9-09469dc7fe7d/@@download/cross_correlation_plot/ENCFF011LJK-ENCFF649MVC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB691FNS kevin-white:2015-1587 "ENCFF649MVC,ENCFF011LJK" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:04:31.860142+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqkQj03692Fy2Pk02vGVq2 ENCSR440VKE https://www.encodeproject.org/experiments/ENCSR440VKE "recombinant protein,transcription factor" eGFP-ADNP-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF666EIZ https://www.encodeproject.org/files/ENCFF666EIZ/@@download/ENCFF666EIZ.bam ENCFF591QMG https://www.encodeproject.org/files/ENCFF591QMG/@@download/ENCFF591QMG.bam 33.3 M 0 32.8 M 0.984 SE 50 50 native 0.0 M 27.3 M 26.6 M 0.797 0.98 0.98 58.41 310 1.05 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/72e2d0ff-d632-4231-b8d9-e6433068f86e/@@download/cross_correlation_plot/ENCFF652IDC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB779JJT kevin-white:2015-1499 ENCFF652IDC HiSeq 2500 2016-10-09T17:05:18.040503+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5vP80jv1X056bqGfgGfZv ENCSR440VKE https://www.encodeproject.org/experiments/ENCSR440VKE "recombinant protein,transcription factor" eGFP-ADNP-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF540ZTB https://www.encodeproject.org/files/ENCFF540ZTB/@@download/ENCFF540ZTB.bam ENCFF072MZF https://www.encodeproject.org/files/ENCFF072MZF/@@download/ENCFF072MZF.bam 25.1 M 0 24.6 M 0.980 SE 50 50 native 0.0 M 20.5 M 19.9 M 0.795 0.98 0.98 65.13 340 1.06 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/14a8f4e6-4c28-4050-b2a4-919e17f5617d/@@download/cross_correlation_plot/ENCFF516GOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB217ZXW kevin-white:2015-1500 ENCFF516GOL HiSeq 2500 2016-10-09T17:05:05.610812+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5vV80jv1bJQB62j8VV6KK ENCSR740NPG https://www.encodeproject.org/experiments/ENCSR740NPG "recombinant protein,transcription factor" eGFP-BACH1-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF042SJF https://www.encodeproject.org/files/ENCFF042SJF/@@download/ENCFF042SJF.bam ENCFF407GKR https://www.encodeproject.org/files/ENCFF407GKR/@@download/ENCFF407GKR.bam 41.7 M 0 38.3 M 0.918 SE 50 50 native 0.0 M 31.4 M 28.0 M 0.672 0.92 0.92 13.20 185 1.05 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f09e04e-e2bf-4e97-9f4b-854fe9d7f01e/@@download/cross_correlation_plot/ENCFF168MKQ-ENCFF979UQU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB202XBO kevin-white:2015-1671 "ENCFF979UQU,ENCFF168MKQ" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:08:31.757427+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4B3Q0jv1QxJBfj5Zb2pvf ENCSR740NPG https://www.encodeproject.org/experiments/ENCSR740NPG "recombinant protein,transcription factor" eGFP-BACH1-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF221XVM https://www.encodeproject.org/files/ENCFF221XVM/@@download/ENCFF221XVM.bam ENCFF616RIU https://www.encodeproject.org/files/ENCFF616RIU/@@download/ENCFF616RIU.bam 34.5 M 0 32.2 M 0.934 SE 50 50 native 0.0 M 26.9 M 25.9 M 0.750 0.97 0.97 39.64 150 1.04 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e3ac5d2-80cf-4fe7-82a6-43a9938752a5/@@download/cross_correlation_plot/ENCFF501KRI-ENCFF858NEZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB638KGJ kevin-white:2015-1586 "ENCFF858NEZ,ENCFF501KRI" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:00:24.544776+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4B500jv1vY92b0GYjVG0V ENCSR620VIC https://www.encodeproject.org/experiments/ENCSR620VIC "recombinant protein,transcription factor" eGFP-CEBPG-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF693JVP https://www.encodeproject.org/files/ENCFF693JVP/@@download/ENCFF693JVP.bam ENCFF666YZZ https://www.encodeproject.org/files/ENCFF666YZZ/@@download/ENCFF666YZZ.bam 37.3 M 0 36.7 M 0.983 SE 50 50 native 0.0 M 30.8 M 29.5 M 0.791 0.98 0.98 56.63 195 1.12 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/39cfa3b8-1f47-4ef8-a6fb-bd5800d27bb9/@@download/cross_correlation_plot/ENCFF271TCS-ENCFF508KFG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB295MWI kevin-white:2015-1874 "ENCFF271TCS,ENCFF508KFG" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:01:50.720146+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48680jv1vY92b0GYjVFzP ENCSR620VIC https://www.encodeproject.org/experiments/ENCSR620VIC "recombinant protein,transcription factor" eGFP-CEBPG-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF620VNP https://www.encodeproject.org/files/ENCFF620VNP/@@download/ENCFF620VNP.bam ENCFF855HYM https://www.encodeproject.org/files/ENCFF855HYM/@@download/ENCFF855HYM.bam 46.9 M 0 45.6 M 0.972 SE 50 50 native 0.0 M 38.0 M 35.5 M 0.758 0.97 0.98 45.63 235 1.12 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/851c5613-5120-4a1f-b20b-037e92c4f9ef/@@download/cross_correlation_plot/ENCFF179MKT-ENCFF282ZHS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB835HSE kevin-white:2015-1875 "ENCFF179MKT,ENCFF282ZHS" HiSeq 2000 2016-10-09T17:02:17.865705+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv487j0jv1XvFGkBjjfjQPy ENCSR178NTX https://www.encodeproject.org/experiments/ENCSR178NTX "transcription factor,recombinant protein" eGFP-CUX1-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF060WJH https://www.encodeproject.org/files/ENCFF060WJH/@@download/ENCFF060WJH.bam ENCFF098YSL https://www.encodeproject.org/files/ENCFF098YSL/@@download/ENCFF098YSL.bam 27.2 M 0 26.0 M 0.956 SE 50 50 native 0.0 M 21.5 M 20.8 M 0.763 0.97 0.97 34.57 180 1.02 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d7bab1d-3d4d-4a1f-b873-eaba36bdcf19/@@download/cross_correlation_plot/ENCFF826QKF-ENCFF494KWC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB637IGI kevin-white:2015-1774 "ENCFF826QKF,ENCFF494KWC" HiSeq 2500 2016-10-09T17:00:12.336665+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43b00jv1g5yGjfvVx0Kz7 ENCSR178NTX https://www.encodeproject.org/experiments/ENCSR178NTX "transcription factor,recombinant protein" eGFP-CUX1-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF589UVV https://www.encodeproject.org/files/ENCFF589UVV/@@download/ENCFF589UVV.bam ENCFF012WGB https://www.encodeproject.org/files/ENCFF012WGB/@@download/ENCFF012WGB.bam 30.8 M 0 29.9 M 0.973 SE 50 50 native 0.0 M 24.6 M 24.1 M 0.782 0.98 0.98 52.34 140 1.02 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1cb14b4-36fb-49d1-96b0-d81910c59009/@@download/cross_correlation_plot/ENCFF320OTV-ENCFF197WLE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB516VHP kevin-white:2015-1775 "ENCFF320OTV,ENCFF197WLE" HiSeq 2500 2016-10-09T17:00:11.771349+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43fj0jv1QxJBfj5Zb2pf2 ENCSR709DRM https://www.encodeproject.org/experiments/ENCSR709DRM "recombinant protein,transcription factor" eGFP-E2F5-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF980YNA https://www.encodeproject.org/files/ENCFF980YNA/@@download/ENCFF980YNA.bam ENCFF141IWK https://www.encodeproject.org/files/ENCFF141IWK/@@download/ENCFF141IWK.bam 27.5 M 0 25.6 M 0.931 SE 50 50 native 0.0 M 21.4 M 20.1 M 0.730 0.98 0.98 55.33 155 1.08 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/c369a018-045f-4536-87b3-ef31339078dd/@@download/cross_correlation_plot/ENCFF903EIQ-ENCFF384QMY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB731CDH kevin-white:2016-164 "ENCFF903EIQ,ENCFF384QMY" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:32:45.769142+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5zGQ0jv1fXGPZpVVpjYPx ENCSR709DRM https://www.encodeproject.org/experiments/ENCSR709DRM "recombinant protein,transcription factor" eGFP-E2F5-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF564FBJ https://www.encodeproject.org/files/ENCFF564FBJ/@@download/ENCFF564FBJ.bam ENCFF597NPX https://www.encodeproject.org/files/ENCFF597NPX/@@download/ENCFF597NPX.bam 34.4 M 0 32.6 M 0.949 SE 50 50 native 0.0 M 27.2 M 25.1 M 0.731 0.98 0.98 46.00 165 1.08 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/541ac6c0-98b2-427a-bc58-d7d612afc19e/@@download/cross_correlation_plot/ENCFF395ENN-ENCFF633GWT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB512SXK kevin-white:2016-165 "ENCFF633GWT,ENCFF395ENN" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:33:14.699078+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5zP80jv1xFKXGVbpg0QF1 ENCSR975SSR https://www.encodeproject.org/experiments/ENCSR975SSR "recombinant protein,transcription factor" eGFP-ELF1-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF251EVS https://www.encodeproject.org/files/ENCFF251EVS/@@download/ENCFF251EVS.bam ENCFF994XOL https://www.encodeproject.org/files/ENCFF994XOL/@@download/ENCFF994XOL.bam 33.2 M 0 32.5 M 0.980 SE 50 50 native 0.0 M 27.2 M 26.4 M 0.796 0.98 0.99 71.55 175 1.09 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/83a99496-db60-402d-a0a0-1cb61451eac0/@@download/cross_correlation_plot/ENCFF649VGU-ENCFF253BVP_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB346TCP kevin-white:2015-1603 "ENCFF649VGU,ENCFF253BVP" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:04:33.701404+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv63XQ0jv1b6Q2yZ51Zb5Vf ENCSR975SSR https://www.encodeproject.org/experiments/ENCSR975SSR "recombinant protein,transcription factor" eGFP-ELF1-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF619SRD https://www.encodeproject.org/files/ENCFF619SRD/@@download/ENCFF619SRD.bam ENCFF245TDR https://www.encodeproject.org/files/ENCFF245TDR/@@download/ENCFF245TDR.bam 40.0 M 0 39.3 M 0.981 SE 50 50 native 0.0 M 32.8 M 31.5 M 0.786 0.98 0.98 57.24 195 1.10 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/57d8840f-6035-4442-b3b1-e38b3ce3a38c/@@download/cross_correlation_plot/ENCFF073VHT-ENCFF564LFT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB071EPQ kevin-white:2015-1604 "ENCFF564LFT,ENCFF073VHT" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:04:37.415921+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv63Zj0jv1fvz446Zf2J5qk ENCSR338QAC https://www.encodeproject.org/experiments/ENCSR338QAC "recombinant protein,transcription factor" eGFP-ELK1-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF137QTZ https://www.encodeproject.org/files/ENCFF137QTZ/@@download/ENCFF137QTZ.bam ENCFF116GRO https://www.encodeproject.org/files/ENCFF116GRO/@@download/ENCFF116GRO.bam 29.9 M 0 28.0 M 0.935 SE 50 50 native 0.0 M 23.1 M 21.5 M 0.719 0.98 0.98 41.26 170 1.07 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8a01bdb-6f6c-4290-97d1-160ed21823b9/@@download/cross_correlation_plot/ENCFF434NFA-ENCFF546UZB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB632UHH kevin-white:2016-167 "ENCFF546UZB,ENCFF434NFA" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:09:02.667792+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3f2Q0jv1zBYbxYJ5zzyp0 ENCSR338QAC https://www.encodeproject.org/experiments/ENCSR338QAC "recombinant protein,transcription factor" eGFP-ELK1-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF407GAB https://www.encodeproject.org/files/ENCFF407GAB/@@download/ENCFF407GAB.bam ENCFF637WOZ https://www.encodeproject.org/files/ENCFF637WOZ/@@download/ENCFF637WOZ.bam 31.1 M 0 28.9 M 0.929 SE 50 50 native 0.0 M 23.9 M 22.3 M 0.717 0.98 0.98 43.71 200 1.07 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f3b0447-62cd-4a52-a779-bb2298cc3bb4/@@download/cross_correlation_plot/ENCFF806XBN-ENCFF222IGM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB421HDX kevin-white:2016-168 "ENCFF806XBN,ENCFF222IGM" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:09:13.418579+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3f400jv1XYYX2Fxk3f4X2 ENCSR000DKB https://www.encodeproject.org/experiments/ENCSR000DKB "recombinant protein,transcription factor" eGFP-FOS-human K562 immortalized cell line 1 kevin-white ENCODE2 GRCh38 ENCFF063VYC https://www.encodeproject.org/files/ENCFF063VYC/@@download/ENCFF063VYC.bam ENCFF262BVH https://www.encodeproject.org/files/ENCFF262BVH/@@download/ENCFF262BVH.bam 22.1 M 0 21.3 M 0.961 SE 36 36 native 0.0 M 14.7 M 14.3 M 0.648 0.98 0.98 59.91 140 1.05 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fd16054-31b4-41e5-a0c4-e8eb15363e63/@@download/cross_correlation_plot/ENCFF000ZTY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB797MWY ENCFF000ZTY Illumina Genome Analyzer II 2016-12-11T07:51:41.138402+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Y880369KbxV61z4GFx1Z ENCSR000DKB https://www.encodeproject.org/experiments/ENCSR000DKB "recombinant protein,transcription factor" eGFP-FOS-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF011KDH https://www.encodeproject.org/files/ENCFF011KDH/@@download/ENCFF011KDH.bam ENCFF607RHS https://www.encodeproject.org/files/ENCFF607RHS/@@download/ENCFF607RHS.bam 16.9 M 0 16.6 M 0.978 SE 36 36 native 0.0 M 12.6 M 12.2 M 0.719 0.97 0.97 41.14 125 1.12 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/61a3333c-f4ec-4db9-84ce-518eba2b0dc0/@@download/cross_correlation_plot/ENCFF000ZUD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB162RTZ ENCFF000ZUD Illumina Genome Analyzer II 2016-12-11T06:16:34.939181+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166YK00369BgG8x1ygv1Xkz ENCSR000DKB https://www.encodeproject.org/experiments/ENCSR000DKB "recombinant protein,transcription factor" eGFP-FOS-human K562 immortalized cell line 3 kevin-white ENCODE2 GRCh38 ENCFF046GWZ https://www.encodeproject.org/files/ENCFF046GWZ/@@download/ENCFF046GWZ.bam ENCFF652LPW https://www.encodeproject.org/files/ENCFF652LPW/@@download/ENCFF652LPW.bam 15.2 M 0 14.9 M 0.983 SE 36 36 native 0.0 M 11.4 M 11.1 M 0.730 0.98 0.98 66.78 105 1.30 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b23ad32-6b31-46b3-8f3e-c6bf17b1c1ec/@@download/cross_correlation_plot/ENCFF000ZUE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB464XYX ENCFF000ZUE Illumina Genome Analyzer II 2016-12-11T06:22:55.781107+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166YYQ0369445BJJ915X9y3 ENCSR239ZLZ https://www.encodeproject.org/experiments/ENCSR239ZLZ "recombinant protein,transcription factor" eGFP-FOSL1-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF581AZU https://www.encodeproject.org/files/ENCFF581AZU/@@download/ENCFF581AZU.bam ENCFF924JMI https://www.encodeproject.org/files/ENCFF924JMI/@@download/ENCFF924JMI.bam 44.2 M 0 40.3 M 0.912 SE 50 50 native 0.0 M 33.8 M 31.3 M 0.708 0.96 0.96 25.02 240 1.19 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/d400a6f5-19d8-48f4-85d8-0ec1eb4eaf37/@@download/cross_correlation_plot/ENCFF429QSN-ENCFF645REX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB402PWC kevin-white:2015-3258 "ENCFF429QSN,ENCFF645REX" "HiSeq 2000,HiSeq 2500" 2016-10-09T16:59:42.479093+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46P00jv1zBYbxYJ5zzzFY ENCSR239ZLZ https://www.encodeproject.org/experiments/ENCSR239ZLZ "recombinant protein,transcription factor" eGFP-FOSL1-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF500HFO https://www.encodeproject.org/files/ENCFF500HFO/@@download/ENCFF500HFO.bam ENCFF291ZZD https://www.encodeproject.org/files/ENCFF291ZZD/@@download/ENCFF291ZZD.bam 49.2 M 0 45.2 M 0.919 SE 50 50 native 0.0 M 37.9 M 35.0 M 0.712 0.95 0.96 24.59 195 1.23 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3091539-9e86-4b4d-94d8-a9a07c210312/@@download/cross_correlation_plot/ENCFF381IRT-ENCFF253CXQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB152PAW kevin-white:2015-3259 "ENCFF253CXQ,ENCFF381IRT" "HiSeq 2000,HiSeq 2500" 2016-10-09T16:59:43.247331+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46Qj0jv1QxJBfj5Zb2pjZ ENCSR847LBF https://www.encodeproject.org/experiments/ENCSR847LBF "recombinant protein,transcription factor" eGFP-FOXJ2-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF834YLT https://www.encodeproject.org/files/ENCFF834YLT/@@download/ENCFF834YLT.bam ENCFF676CZX https://www.encodeproject.org/files/ENCFF676CZX/@@download/ENCFF676CZX.bam 26.8 M 0 25.6 M 0.957 SE 50 50 native 0.0 M 21.0 M 19.8 M 0.741 0.97 0.98 40.55 180 1.06 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/7dd38e66-58db-4f11-9ab5-8faef1b7536d/@@download/cross_correlation_plot/ENCFF218BEJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB324CQL kevin-white:2016-609 ENCFF218BEJ HiSeq 2000 2016-10-09T17:05:28.890300+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv68q00jv1b6Q2yZ51Zb5Y9 ENCSR847LBF https://www.encodeproject.org/experiments/ENCSR847LBF "recombinant protein,transcription factor" eGFP-FOXJ2-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF904PBR https://www.encodeproject.org/files/ENCFF904PBR/@@download/ENCFF904PBR.bam ENCFF281VJS https://www.encodeproject.org/files/ENCFF281VJS/@@download/ENCFF281VJS.bam 33.4 M 0 31.8 M 0.952 SE 50 50 native 0.0 M 26.2 M 24.9 M 0.746 0.97 0.98 40.93 170 1.04 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c965fb4-cc0d-4392-8bd2-2d81052fde81/@@download/cross_correlation_plot/ENCFF432PNM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB771QPO kevin-white:2016-610 ENCFF432PNM HiSeq 2500 2016-10-09T17:05:38.622106+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv68x00jv1XpBpGXQxqxYPq ENCSR290MUH https://www.encodeproject.org/experiments/ENCSR290MUH "recombinant protein,transcription factor" eGFP-GABPA-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF400MMA https://www.encodeproject.org/files/ENCFF400MMA/@@download/ENCFF400MMA.bam ENCFF919ECJ https://www.encodeproject.org/files/ENCFF919ECJ/@@download/ENCFF919ECJ.bam 36.1 M 0 30.6 M 0.848 SE 50 50 native 0.0 M 26.0 M 22.6 M 0.628 0.89 0.93 19.90 280 1.64 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/152bf92a-6378-4e0d-8d8c-c09a50a65287/@@download/cross_correlation_plot/ENCFF346WZR-ENCFF861PLD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB234YCU kevin-white:2015-3154 "ENCFF861PLD,ENCFF346WZR" HiSeq 2500 2016-10-09T17:05:50.082810+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3q580jv1zBYbxYJ5zzz0X ENCSR290MUH https://www.encodeproject.org/experiments/ENCSR290MUH "recombinant protein,transcription factor" eGFP-GABPA-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF593XTM https://www.encodeproject.org/files/ENCFF593XTM/@@download/ENCFF593XTM.bam ENCFF244TJH https://www.encodeproject.org/files/ENCFF244TJH/@@download/ENCFF244TJH.bam 27.0 M 0 22.9 M 0.849 SE 50 50 native 0.0 M 19.5 M 17.0 M 0.632 0.89 0.93 20.33 255 1.95 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/757fdfac-4920-425e-991e-22325d6ce575/@@download/cross_correlation_plot/ENCFF385UYP-ENCFF701VYF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB530CXT kevin-white:2015-3155 "ENCFF385UYP,ENCFF701VYF" HiSeq 2500 2016-10-09T17:09:45.702645+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3q6j0jv1xPyfX78Yz4gXF ENCSR000DKA https://www.encodeproject.org/experiments/ENCSR000DKA "recombinant protein,transcription factor" eGFP-GATA2-human K562 immortalized cell line 1 kevin-white ENCODE2 GRCh38 ENCFF082TOF https://www.encodeproject.org/files/ENCFF082TOF/@@download/ENCFF082TOF.bam ENCFF939IDF https://www.encodeproject.org/files/ENCFF939IDF/@@download/ENCFF939IDF.bam 26.1 M 0 25.9 M 0.994 SE 36 36 native 0.0 M 20.2 M 18.7 M 0.717 0.93 0.93 15.01 265 1.15 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/830c7934-aedb-4bbe-9e4d-d1992b887be0/@@download/cross_correlation_plot/ENCFF000ZUB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB049VVD ENCFF000ZUB Illumina Genome Analyzer II 2016-11-15T05:10:59.302058+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6vb00369FfP54JvFgv3fX ENCSR000DKA https://www.encodeproject.org/experiments/ENCSR000DKA "recombinant protein,transcription factor" eGFP-GATA2-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF880ZXO https://www.encodeproject.org/files/ENCFF880ZXO/@@download/ENCFF880ZXO.bam ENCFF925YOB https://www.encodeproject.org/files/ENCFF925YOB/@@download/ENCFF925YOB.bam 32.0 M 0 30.5 M 0.952 SE 36 36 native 0.0 M 23.1 M 21.5 M 0.671 0.93 0.93 14.39 135 1.03 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/d85a8d27-4e8c-4873-bb44-043b388307c7/@@download/cross_correlation_plot/ENCFF000ZUK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB573LZS ENCFF000ZUK Illumina Genome Analyzer II 2016-11-15T05:10:55.852464+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6vqQ036956PvgkQ1KX5gb ENCSR532KTI https://www.encodeproject.org/experiments/ENCSR532KTI "recombinant protein,transcription factor" eGFP-GTF2E2-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF106BHY https://www.encodeproject.org/files/ENCFF106BHY/@@download/ENCFF106BHY.bam ENCFF581FUF https://www.encodeproject.org/files/ENCFF581FUF/@@download/ENCFF581FUF.bam 38.6 M 0 37.3 M 0.967 SE 50 50 native 0.0 M 31.2 M 29.9 M 0.775 0.97 0.97 37.52 210 1.02 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/44d0b51b-1a51-4f78-bb8c-330f4c66428f/@@download/cross_correlation_plot/ENCFF678JFY-ENCFF428TYZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB009PDX kevin-white:2015-2356 "ENCFF678JFY,ENCFF428TYZ" HiSeq 2500 2016-10-09T17:10:35.923200+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3v500jv1f60PxyZ9JGKxP ENCSR532KTI https://www.encodeproject.org/experiments/ENCSR532KTI "recombinant protein,transcription factor" eGFP-GTF2E2-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF623YPH https://www.encodeproject.org/files/ENCFF623YPH/@@download/ENCFF623YPH.bam ENCFF518QRE https://www.encodeproject.org/files/ENCFF518QRE/@@download/ENCFF518QRE.bam 32.0 M 0 30.5 M 0.953 SE 50 50 native 0.0 M 25.6 M 24.0 M 0.751 0.95 0.95 22.08 295 1.03 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0386ac0-b59b-4a18-9ce3-c31e1cf7ec01/@@download/cross_correlation_plot/ENCFF272RDB-ENCFF164RED_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB415VWE kevin-white:2015-2357 "ENCFF272RDB,ENCFF164RED" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:10:07.094873+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3v6Q0jv1zBYbxYJ5zzz14 ENCSR000DJZ https://www.encodeproject.org/experiments/ENCSR000DJZ "recombinant protein,transcription factor" eGFP-HDAC8-human K562 immortalized cell line 1 kevin-white ENCODE2 GRCh38 ENCFF786TLS https://www.encodeproject.org/files/ENCFF786TLS/@@download/ENCFF786TLS.bam ENCFF063FBY https://www.encodeproject.org/files/ENCFF063FBY/@@download/ENCFF063FBY.bam 21.9 M 0 21.7 M 0.992 SE 36 36 native 0.0 M 16.7 M 15.7 M 0.719 0.95 0.95 19.68 275 1.03 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/ffffe951-8115-4dda-aae7-17dbbeff474f/@@download/cross_correlation_plot/ENCFF000ZUL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB936KOG ENCFF000ZUL Illumina Genome Analyzer II 2016-11-15T05:06:42.299451+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6v6j0369FZF23QQ0jZvK2 ENCSR000DJZ https://www.encodeproject.org/experiments/ENCSR000DJZ "recombinant protein,transcription factor" eGFP-HDAC8-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF659KOL https://www.encodeproject.org/files/ENCFF659KOL/@@download/ENCFF659KOL.bam ENCFF158DVM https://www.encodeproject.org/files/ENCFF158DVM/@@download/ENCFF158DVM.bam 31.5 M 0 30.0 M 0.950 SE 36 36 native 0.0 M 22.3 M 21.0 M 0.667 0.95 0.95 19.70 120 1.03 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef00981b-32f7-4523-b48c-ba6959f1ec5d/@@download/cross_correlation_plot/ENCFF000ZUS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB184KFA ENCFF000ZUS Illumina Genome Analyzer II 2016-11-15T05:11:43.569313+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6vGQ03699PK8zfkzkFxz1 ENCSR000DJY https://www.encodeproject.org/experiments/ENCSR000DJY "recombinant protein,transcription factor" eGFP-JUNB-human K562 immortalized cell line 1 kevin-white ENCODE2 GRCh38 ENCFF723OFY https://www.encodeproject.org/files/ENCFF723OFY/@@download/ENCFF723OFY.bam ENCFF870BYJ https://www.encodeproject.org/files/ENCFF870BYJ/@@download/ENCFF870BYJ.bam 22.3 M 0 21.7 M 0.976 SE 36 36 native 0.0 M 16.7 M 8.8 M 0.394 0.53 0.47 1.56 240 1.33 4.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4ee9fa6-402c-45a2-b282-90af65dade37/@@download/cross_correlation_plot/ENCFF000ZUQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB218GPE ENCFF000ZUQ Illumina Genome Analyzer II 2016-12-10T17:03:31.189060+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F161Pyj03695zJkyP3F8929y ENCSR000DJY https://www.encodeproject.org/experiments/ENCSR000DJY "recombinant protein,transcription factor" eGFP-JUNB-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF827JRA https://www.encodeproject.org/files/ENCFF827JRA/@@download/ENCFF827JRA.bam ENCFF104SNU https://www.encodeproject.org/files/ENCFF104SNU/@@download/ENCFF104SNU.bam 17.7 M 0 17.4 M 0.982 SE 36 36 native 0.0 M 13.2 M 13.0 M 0.732 0.98 0.99 81.49 110 1.21 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/d07d78ce-317f-4d40-839a-61ff746c563c/@@download/cross_correlation_plot/ENCFF000ZUR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB987PHG ENCFF000ZUR Illumina Genome Analyzer II 2016-12-10T17:18:55.081039+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F161Q3Q036904pZZ8v3bkfv6 ENCSR000DJX https://www.encodeproject.org/experiments/ENCSR000DJX "recombinant protein,transcription factor" eGFP-JUND-human K562 immortalized cell line 1 kevin-white ENCODE2 GRCh38 ENCFF387ZWT https://www.encodeproject.org/files/ENCFF387ZWT/@@download/ENCFF387ZWT.bam ENCFF789TTO https://www.encodeproject.org/files/ENCFF789TTO/@@download/ENCFF789TTO.bam 26.5 M 0 25.9 M 0.979 SE 36 36 native 0.0 M 20.0 M 18.8 M 0.709 0.95 0.95 19.18 270 1.14 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/6dad223a-5e74-4ed7-b381-6a8c3421c5bd/@@download/cross_correlation_plot/ENCFF000ZUU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB660EVC ENCFF000ZUU Illumina Genome Analyzer II 2016-11-15T05:11:38.368625+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6q1003690VBK7Zv5vZvjg ENCSR000DJX https://www.encodeproject.org/experiments/ENCSR000DJX "recombinant protein,transcription factor" eGFP-JUND-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF110QRO https://www.encodeproject.org/files/ENCFF110QRO/@@download/ENCFF110QRO.bam ENCFF319EWR https://www.encodeproject.org/files/ENCFF319EWR/@@download/ENCFF319EWR.bam 18.7 M 0 18.4 M 0.980 SE 36 36 native 0.0 M 14.0 M 13.5 M 0.720 0.97 0.97 32.67 130 1.08 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/2b678855-9c30-405a-a8e3-eaf39a7a21a2/@@download/cross_correlation_plot/ENCFF000ZVC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB205GLR ENCFF000ZVC Illumina Genome Analyzer II 2016-11-15T05:11:22.899478+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6q8Q036935XbqQ06p9f3X ENCSR000DJX https://www.encodeproject.org/experiments/ENCSR000DJX "recombinant protein,transcription factor" eGFP-JUND-human K562 immortalized cell line 3 kevin-white ENCODE2 GRCh38 ENCFF661MOG https://www.encodeproject.org/files/ENCFF661MOG/@@download/ENCFF661MOG.bam ENCFF058KXK https://www.encodeproject.org/files/ENCFF058KXK/@@download/ENCFF058KXK.bam 23.8 M 0 23.1 M 0.972 SE 36 36 native 0.0 M 18.1 M 17.1 M 0.720 0.95 0.96 27.06 105 1.83 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/2eda69d8-3e77-4745-b601-d562034ae576/@@download/cross_correlation_plot/ENCFF000ZVD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB197JDY ENCFF000ZVD Illumina Genome Analyzer II 2016-11-15T05:11:31.934893+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6qPQ03690VBK7Zv5vZvk7 ENCSR750LYM https://www.encodeproject.org/experiments/ENCSR750LYM "recombinant protein,transcription factor" eGFP-NR2C2-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF856EXS https://www.encodeproject.org/files/ENCFF856EXS/@@download/ENCFF856EXS.bam ENCFF264TNB https://www.encodeproject.org/files/ENCFF264TNB/@@download/ENCFF264TNB.bam 51.0 M 0 48.2 M 0.944 SE 50 50 native 0.0 M 40.3 M 36.8 M 0.720 0.93 0.95 23.28 290 1.17 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/faefd380-7ae3-4cba-9087-c5d7dd3df97e/@@download/cross_correlation_plot/ENCFF055TRX-ENCFF243CPL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB304GIX kevin-white:2015-1588 "ENCFF055TRX,ENCFF243CPL" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:01:07.399181+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45G00jv1zBYbxYJ5zzzBq ENCSR750LYM https://www.encodeproject.org/experiments/ENCSR750LYM "recombinant protein,transcription factor" eGFP-NR2C2-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF597WPX https://www.encodeproject.org/files/ENCFF597WPX/@@download/ENCFF597WPX.bam ENCFF504GNL https://www.encodeproject.org/files/ENCFF504GNL/@@download/ENCFF504GNL.bam 44.0 M 0 41.6 M 0.945 SE 50 50 native 0.0 M 34.7 M 30.0 M 0.682 0.89 0.91 12.54 330 1.29 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/7814e687-8024-445e-8b0c-9043d926fc08/@@download/cross_correlation_plot/ENCFF580YPG-ENCFF774QGH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB483RRD kevin-white:2015-1672 "ENCFF774QGH,ENCFF580YPG" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:00:25.655495+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45K00jv1vY92b0GYjVFvk ENCSR000DJW https://www.encodeproject.org/experiments/ENCSR000DJW "recombinant protein,transcription factor" eGFP-NR4A1-human K562 immortalized cell line 1 kevin-white ENCODE2 GRCh38 ENCFF650RFL https://www.encodeproject.org/files/ENCFF650RFL/@@download/ENCFF650RFL.bam ENCFF677UDF https://www.encodeproject.org/files/ENCFF677UDF/@@download/ENCFF677UDF.bam 22.8 M 0 22.6 M 0.990 SE 36 36 native 0.0 M 16.2 M 15.9 M 0.696 0.98 0.98 55.80 255 1.03 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/67396fe7-7ec2-4c58-8b05-623fa6a3fdeb/@@download/cross_correlation_plot/ENCFF000ZVE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB300FOY ENCFF000ZVE Illumina Genome Analyzer II 2016-11-15T05:11:10.389275+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6qjQ03691P396yvzqp9qq ENCSR000DJW https://www.encodeproject.org/experiments/ENCSR000DJW "recombinant protein,transcription factor" eGFP-NR4A1-human K562 immortalized cell line 2 kevin-white ENCODE2 GRCh38 ENCFF602UAC https://www.encodeproject.org/files/ENCFF602UAC/@@download/ENCFF602UAC.bam ENCFF727AXF https://www.encodeproject.org/files/ENCFF727AXF/@@download/ENCFF727AXF.bam 26.4 M 0 25.9 M 0.984 SE 36 36 native 0.0 M 19.8 M 19.3 M 0.731 0.98 0.98 43.85 110 1.03 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0b66620-bddc-4dec-a7e7-e478bad28392/@@download/cross_correlation_plot/ENCFF000ZVF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB796WKO ENCFF000ZVF Illumina Genome Analyzer II 2016-11-15T05:11:18.671481+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6qzQ03690XQ3x6Z1Z7vqB ENCSR017GBO https://www.encodeproject.org/experiments/ENCSR017GBO "recombinant protein,transcription factor" eGFP-TFDP1-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF795XBH https://www.encodeproject.org/files/ENCFF795XBH/@@download/ENCFF795XBH.bam ENCFF046AMS https://www.encodeproject.org/files/ENCFF046AMS/@@download/ENCFF046AMS.bam 51.1 M 0 49.5 M 0.969 SE 50 50 native 0.0 M 41.6 M 39.3 M 0.770 0.96 0.96 23.27 235 1.06 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/55cf049a-58e8-4a3b-b650-c0452a7df8cb/@@download/cross_correlation_plot/ENCFF713DPD-ENCFF697GAP_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB069CDH kevin-white:2015-1673 "ENCFF713DPD,ENCFF697GAP" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:02:09.120643+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42J00jv1vY92b0GYjVFpP ENCSR017GBO https://www.encodeproject.org/experiments/ENCSR017GBO "recombinant protein,transcription factor" eGFP-TFDP1-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF070MZX https://www.encodeproject.org/files/ENCFF070MZX/@@download/ENCFF070MZX.bam ENCFF231UMI https://www.encodeproject.org/files/ENCFF231UMI/@@download/ENCFF231UMI.bam 25.7 M 0 24.4 M 0.950 SE 50 50 native 0.0 M 20.4 M 19.8 M 0.771 0.97 0.97 39.11 225 1.05 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/89022ac8-5c7c-4056-9d8e-20920cac87b3/@@download/cross_correlation_plot/ENCFF987WCU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB120KNR kevin-white:2015-1674 ENCFF987WCU HiSeq 2500 2016-10-09T17:00:48.048512+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42KQ0jv1zBYbxYJ5zzz7Y ENCSR359NFW https://www.encodeproject.org/experiments/ENCSR359NFW "recombinant protein,transcription factor" eGFP-USF2-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF102ZOS https://www.encodeproject.org/files/ENCFF102ZOS/@@download/ENCFF102ZOS.bam ENCFF835WTF https://www.encodeproject.org/files/ENCFF835WTF/@@download/ENCFF835WTF.bam 25.1 M 0 22.0 M 0.876 SE 50 50 native 0.0 M 17.9 M 16.2 M 0.644 0.95 0.96 25.49 195 1.30 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/93acf0a6-c1a6-4ca4-9418-4fb0d6767bd0/@@download/cross_correlation_plot/ENCFF141CZI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB892MQS kevin-white:2016-529 ENCFF141CZI HiSeq 2000 2016-10-09T17:01:37.815694+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4P200jv1xPyfX78Yz4j9Z ENCSR359NFW https://www.encodeproject.org/experiments/ENCSR359NFW "recombinant protein,transcription factor" eGFP-USF2-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF979BFW https://www.encodeproject.org/files/ENCFF979BFW/@@download/ENCFF979BFW.bam ENCFF888BVK https://www.encodeproject.org/files/ENCFF888BVK/@@download/ENCFF888BVK.bam 16.3 M 0 15.0 M 0.920 SE 50 50 native 0.0 M 12.3 M 11.5 M 0.709 0.97 0.97 45.40 190 1.42 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/88901982-96ae-416f-a15f-70f5c9ac55a4/@@download/cross_correlation_plot/ENCFF038QTK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB386PFE kevin-white:2016-528 ENCFF038QTK HiSeq 2000 2016-10-09T17:01:40.027160+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4P3Q0jv1f60PxyZ9JGPJb ENCSR189YMA https://www.encodeproject.org/experiments/ENCSR189YMA "recombinant protein,transcription factor" eGFP-VEZF1-human K562 immortalized cell line kevin-white ENCODE3 pending SE 50 "HiSeq 2000,HiSeq 2500" unrunnable ENCSR706BJO https://www.encodeproject.org/experiments/ENCSR706BJO "recombinant protein,transcription factor" eGFP-ZBTB11-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF212PQL https://www.encodeproject.org/files/ENCFF212PQL/@@download/ENCFF212PQL.bam ENCFF289XDI https://www.encodeproject.org/files/ENCFF289XDI/@@download/ENCFF289XDI.bam 43.0 M 0 38.0 M 0.884 SE 50 50 native 0.0 M 32.1 M 24.9 M 0.579 0.84 0.94 20.53 260 1.27 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a893768-79c9-487e-80ca-c88223b09bce/@@download/cross_correlation_plot/ENCFF733OMC-ENCFF229EAT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB311WZV kevin-white:2016-382 "ENCFF229EAT,ENCFF733OMC" HiSeq 2500 2016-10-09T17:34:11.056530+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ZpQ0jv1XvFGkBjjfjQxx ENCSR706BJO https://www.encodeproject.org/experiments/ENCSR706BJO "recombinant protein,transcription factor" eGFP-ZBTB11-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF625AJO https://www.encodeproject.org/files/ENCFF625AJO/@@download/ENCFF625AJO.bam ENCFF532ELN https://www.encodeproject.org/files/ENCFF532ELN/@@download/ENCFF532ELN.bam 43.6 M 0 38.7 M 0.888 SE 50 50 native 0.0 M 32.8 M 24.8 M 0.568 0.82 0.93 19.65 225 1.31 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ef7206a-2641-4027-96bf-a9aaccc2cc51/@@download/cross_correlation_plot/ENCFF112KAJ-ENCFF848CPR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB262CVK kevin-white:2016-383 "ENCFF848CPR,ENCFF112KAJ" HiSeq 2500 2016-10-09T17:34:29.695974+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Zv00jv1g5yGjfvVx0PKv ENCSR158RYZ https://www.encodeproject.org/experiments/ENCSR158RYZ "recombinant protein,transcription factor" eGFP-ZBTB40-human K562 immortalized cell line kevin-white ENCODE3 pending SE 50 "HiSeq 2000,HiSeq 2500" unrunnable ENCSR920ASP https://www.encodeproject.org/experiments/ENCSR920ASP "recombinant protein,transcription factor" eGFP-ZFX-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF680KUB https://www.encodeproject.org/files/ENCFF680KUB/@@download/ENCFF680KUB.bam ENCFF172GCN https://www.encodeproject.org/files/ENCFF172GCN/@@download/ENCFF172GCN.bam 24.1 M 0 23.4 M 0.975 SE 50 50 native 0.0 M 19.4 M 18.8 M 0.781 0.98 0.98 58.74 180 1.31 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/02fa8d57-bf54-42de-a312-1db05cde5978/@@download/cross_correlation_plot/ENCFF215QBP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB287EPO kevin-white:2016-532 ENCFF215QBP HiSeq 2000 2016-10-09T17:02:01.293229+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64q80jv1v69xp00g4J2X6 ENCSR920ASP https://www.encodeproject.org/experiments/ENCSR920ASP "recombinant protein,transcription factor" eGFP-ZFX-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF757TIT https://www.encodeproject.org/files/ENCFF757TIT/@@download/ENCFF757TIT.bam ENCFF338NPG https://www.encodeproject.org/files/ENCFF338NPG/@@download/ENCFF338NPG.bam 23.1 M 0 22.5 M 0.976 SE 50 50 native 0.0 M 18.5 M 18.0 M 0.781 0.98 0.98 71.17 175 1.21 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6860220-a481-4451-8006-769994eb7b61/@@download/cross_correlation_plot/ENCFF426DFS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB658AYO kevin-white:2016-531 ENCFF426DFS HiSeq 2000 2016-10-09T17:02:02.372877+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64x80jv1XpBpGXQxqxYK7 ENCSR448UKK https://www.encodeproject.org/experiments/ENCSR448UKK "recombinant protein,transcription factor" eGFP-ZKSCAN8-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF413VAR https://www.encodeproject.org/files/ENCFF413VAR/@@download/ENCFF413VAR.bam ENCFF867NNE https://www.encodeproject.org/files/ENCFF867NNE/@@download/ENCFF867NNE.bam 47.6 M 0 44.3 M 0.930 SE 50 50 native 0.0 M 36.9 M 35.0 M 0.734 0.95 0.96 22.59 200 1.02 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca78d07d-249c-4151-8c8e-59b162f207fa/@@download/cross_correlation_plot/ENCFF369FNW-ENCFF489GQR_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB288PTN kevin-white:2015-1771 "ENCFF489GQR,ENCFF369FNW" HiSeq 2500 2016-10-09T17:03:27.062490+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6G800jv1f6Kg8jbGjKZKV ENCSR448UKK https://www.encodeproject.org/experiments/ENCSR448UKK "recombinant protein,transcription factor" eGFP-ZKSCAN8-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF811CBJ https://www.encodeproject.org/files/ENCFF811CBJ/@@download/ENCFF811CBJ.bam ENCFF298APG https://www.encodeproject.org/files/ENCFF298APG/@@download/ENCFF298APG.bam 36.5 M 0 34.8 M 0.953 SE 50 50 native 0.0 M 28.8 M 27.0 M 0.742 0.98 0.98 41.66 185 1.04 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/25b6e409-e112-4948-a4a9-1c93f24f7b51/@@download/cross_correlation_plot/ENCFF591FKI-ENCFF763BLG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB254HFU kevin-white:2015-2558 "ENCFF763BLG,ENCFF591FKI" HiSeq 2000 2016-10-09T17:02:48.298495+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6GBQ0jv1fvz446Zf2J5x8 ENCSR018MSO https://www.encodeproject.org/experiments/ENCSR018MSO "recombinant protein,transcription factor" eGFP-ZNF148-human K562 immortalized cell line kevin-white ENCODE3 pending SE 50 "HiSeq 2000,HiSeq 2500" unrunnable ENCSR011PEI https://www.encodeproject.org/experiments/ENCSR011PEI "recombinant protein,transcription factor" eGFP-ZNF175-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF503IYW https://www.encodeproject.org/files/ENCFF503IYW/@@download/ENCFF503IYW.bam ENCFF933PCZ https://www.encodeproject.org/files/ENCFF933PCZ/@@download/ENCFF933PCZ.bam 25.7 M 0 24.8 M 0.965 SE 50 50 native 0.0 M 20.8 M 19.8 M 0.768 0.96 0.96 25.18 180 1.07 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fc0ce94-a345-4ebb-ab14-c64ccbf6f3f3/@@download/cross_correlation_plot/ENCFF316FIQ-ENCFF282GDI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB477VIK kevin-white:2015-2640 "ENCFF316FIQ,ENCFF282GDI" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:00:41.689617+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42x80jv1XvFGkBjjfjQ8k ENCSR011PEI https://www.encodeproject.org/experiments/ENCSR011PEI "recombinant protein,transcription factor" eGFP-ZNF175-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF540VVE https://www.encodeproject.org/files/ENCFF540VVE/@@download/ENCFF540VVE.bam ENCFF140PKT https://www.encodeproject.org/files/ENCFF140PKT/@@download/ENCFF140PKT.bam 26.0 M 0 21.4 M 0.820 SE 50 50 native 0.0 M 17.8 M 14.5 M 0.556 0.83 0.83 5.62 185 1.08 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/d8b019f0-9a82-4876-afb8-5c7bb5ded27a/@@download/cross_correlation_plot/ENCFF740WEF-ENCFF959EDS_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB350TBY kevin-white:2015-2641 "ENCFF959EDS,ENCFF740WEF" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:00:04.276231+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42yj0jv1xPyfX78Yz4gkZ ENCSR580IAO https://www.encodeproject.org/experiments/ENCSR580IAO "recombinant protein,transcription factor" eGFP-ZNF197-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF687QLR https://www.encodeproject.org/files/ENCFF687QLR/@@download/ENCFF687QLR.bam ENCFF458OMJ https://www.encodeproject.org/files/ENCFF458OMJ/@@download/ENCFF458OMJ.bam 17.9 M 0 17.1 M 0.955 SE 50 50 native 0.0 M 14.4 M 13.7 M 0.765 0.98 0.98 53.00 175 1.07 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/e713567a-afeb-4a9e-90ca-c5851a07d702/@@download/cross_correlation_plot/ENCFF841KDB-ENCFF814FHF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB258FKG kevin-white:2016-170 "ENCFF841KDB,ENCFF814FHF" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:01:39.758903+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6JY80jv1fvz446Zf2J5yq ENCSR580IAO https://www.encodeproject.org/experiments/ENCSR580IAO "recombinant protein,transcription factor" eGFP-ZNF197-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF191EJM https://www.encodeproject.org/files/ENCFF191EJM/@@download/ENCFF191EJM.bam ENCFF212GET https://www.encodeproject.org/files/ENCFF212GET/@@download/ENCFF212GET.bam 19.1 M 0 18.3 M 0.957 SE 50 50 native 0.0 M 15.4 M 14.8 M 0.774 0.98 0.98 59.01 160 1.07 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/c27fc85e-abe2-459d-aab3-59aef55d68fd/@@download/cross_correlation_plot/ENCFF379LXN-ENCFF978YQI_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB084LAN kevin-white:2016-171 "ENCFF978YQI,ENCFF379LXN" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:01:53.117385+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6JbQ0jv1f6Kg8jbGjKZPP ENCSR462QZZ https://www.encodeproject.org/experiments/ENCSR462QZZ "recombinant protein,transcription factor" eGFP-ZNF395-human K562 immortalized cell line kevin-white ENCODE3 pending SE 50 HiSeq 2500 unrunnable ENCSR149ZBI https://www.encodeproject.org/experiments/ENCSR149ZBI "recombinant protein,transcription factor" eGFP-ZNF584-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF057CNY https://www.encodeproject.org/files/ENCFF057CNY/@@download/ENCFF057CNY.bam ENCFF130LPZ https://www.encodeproject.org/files/ENCFF130LPZ/@@download/ENCFF130LPZ.bam 23.5 M 0 22.3 M 0.950 SE 50 50 native 0.0 M 18.5 M 17.2 M 0.732 0.94 0.94 16.31 160 1.07 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee62cf5a-b79b-474b-912d-4924b6227a6a/@@download/cross_correlation_plot/ENCFF771AEO-ENCFF159GUZ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB742NAO kevin-white:2015-2663 "ENCFF771AEO,ENCFF159GUZ" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:05:22.889420+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pxQ0jv1g5yGjfvVx0KgB ENCSR149ZBI https://www.encodeproject.org/experiments/ENCSR149ZBI "recombinant protein,transcription factor" eGFP-ZNF584-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF216TEN https://www.encodeproject.org/files/ENCFF216TEN/@@download/ENCFF216TEN.bam ENCFF389BNK https://www.encodeproject.org/files/ENCFF389BNK/@@download/ENCFF389BNK.bam 30.2 M 0 26.4 M 0.873 SE 50 50 native 0.0 M 21.8 M 18.1 M 0.599 0.85 0.85 6.75 205 1.05 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/95ab2c5b-15ee-40c4-9d04-f877f580cf0f/@@download/cross_correlation_plot/ENCFF947GWY-ENCFF856FXU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB623CNB kevin-white:2015-2664 "ENCFF856FXU,ENCFF947GWY" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:05:28.768356+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pz00jv1xPyfX78Yz4gX3 ENCSR603XLW https://www.encodeproject.org/experiments/ENCSR603XLW "recombinant protein,transcription factor" eGFP-ZNF589-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF465ZZG https://www.encodeproject.org/files/ENCFF465ZZG/@@download/ENCFF465ZZG.bam ENCFF056SZG https://www.encodeproject.org/files/ENCFF056SZG/@@download/ENCFF056SZG.bam 33.5 M 0 31.7 M 0.945 SE 50 50 native 0.0 M 26.6 M 24.7 M 0.737 0.94 0.94 17.83 175 1.06 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/e531871d-822f-4ec9-9ffd-934906cffdc3/@@download/cross_correlation_plot/ENCFF588TEN-ENCFF923QSF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB461ZRH kevin-white:2015-2646 "ENCFF923QSF,ENCFF588TEN" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:10:09.670205+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qx00jv1g5yGjfvVx0Kj6 ENCSR603XLW https://www.encodeproject.org/experiments/ENCSR603XLW "recombinant protein,transcription factor" eGFP-ZNF589-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF284MLL https://www.encodeproject.org/files/ENCFF284MLL/@@download/ENCFF284MLL.bam ENCFF514JYU https://www.encodeproject.org/files/ENCFF514JYU/@@download/ENCFF514JYU.bam 24.4 M 0 21.8 M 0.894 SE 50 50 native 0.0 M 18.1 M 16.6 M 0.681 0.94 0.94 17.19 205 1.07 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ecf9581-a788-4894-86e7-a90022a71440/@@download/cross_correlation_plot/ENCFF168UBS-ENCFF971NWQ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB734AIZ kevin-white:2015-2647 "ENCFF168UBS,ENCFF971NWQ" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:09:38.751727+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qyQ0jv1g5yGjfvVx0KjK ENCSR845BCL https://www.encodeproject.org/experiments/ENCSR845BCL "recombinant protein,transcription factor" eGFP-ZNF639-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF461OAN https://www.encodeproject.org/files/ENCFF461OAN/@@download/ENCFF461OAN.bam ENCFF960OSJ https://www.encodeproject.org/files/ENCFF960OSJ/@@download/ENCFF960OSJ.bam 26.4 M 0 25.2 M 0.956 SE 50 50 native 0.0 M 21.0 M 19.8 M 0.751 0.97 0.97 34.69 195 1.12 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/d56ac0cd-f00c-4971-9eb5-b7335ee31208/@@download/cross_correlation_plot/ENCFF801EQE-ENCFF751GLM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB082BKM kevin-white:2015-3065 "ENCFF801EQE,ENCFF751GLM" HiSeq 2500 2016-10-09T17:33:27.898003+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5k500jv1pBzjzVx0B7f2v ENCSR845BCL https://www.encodeproject.org/experiments/ENCSR845BCL "recombinant protein,transcription factor" eGFP-ZNF639-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF433SUG https://www.encodeproject.org/files/ENCFF433SUG/@@download/ENCFF433SUG.bam ENCFF678YUE https://www.encodeproject.org/files/ENCFF678YUE/@@download/ENCFF678YUE.bam 30.0 M 0 25.0 M 0.834 SE 50 50 native 0.0 M 20.8 M 19.4 M 0.646 0.96 0.96 25.72 205 1.14 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5406048-92ec-4632-a749-446667ac5388/@@download/cross_correlation_plot/ENCFF157QEO-ENCFF201XOJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB751SOO kevin-white:2015-3066 "ENCFF157QEO,ENCFF201XOJ" HiSeq 2500 2016-10-09T17:32:46.167064+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5k780jv1xFKXGVbpg0Q9X ENCSR729HVR https://www.encodeproject.org/experiments/ENCSR729HVR "recombinant protein,transcription factor" eGFP-ZNF644-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF095OEN https://www.encodeproject.org/files/ENCFF095OEN/@@download/ENCFF095OEN.bam ENCFF871UOO https://www.encodeproject.org/files/ENCFF871UOO/@@download/ENCFF871UOO.bam 35.3 M 0 25.8 M 0.730 SE 50 50 native 0.0 M 21.2 M 18.1 M 0.511 0.94 0.94 16.74 165 1.05 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/06230175-b34f-4d83-b131-b81ca0731ebe/@@download/cross_correlation_plot/ENCFF863YQQ-ENCFF576YQE_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB705UIX kevin-white:2016-388 "ENCFF863YQQ,ENCFF576YQE" HiSeq 2500 2016-10-09T16:59:58.072749+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4YG80jv1XvFGkBjjfjQpz ENCSR729HVR https://www.encodeproject.org/experiments/ENCSR729HVR "recombinant protein,transcription factor" eGFP-ZNF644-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF334BPF https://www.encodeproject.org/files/ENCFF334BPF/@@download/ENCFF334BPF.bam ENCFF883WDV https://www.encodeproject.org/files/ENCFF883WDV/@@download/ENCFF883WDV.bam 47.9 M 0 45.1 M 0.942 SE 50 50 native 0.0 M 37.3 M 35.2 M 0.735 0.98 0.98 47.71 150 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/67241970-a9de-43ca-ae9d-071974d95308/@@download/cross_correlation_plot/ENCFF922XIL-ENCFF458SBM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB834BNF kevin-white:2016-389 "ENCFF458SBM,ENCFF922XIL" HiSeq 2500 2016-10-09T17:34:45.398484+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4YK00jv1QxJBfj5Zb2q5X ENCSR737UST https://www.encodeproject.org/experiments/ENCSR737UST "recombinant protein,transcription factor" eGFP-ZNF740-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF910XWG https://www.encodeproject.org/files/ENCFF910XWG/@@download/ENCFF910XWG.bam ENCFF802MSR https://www.encodeproject.org/files/ENCFF802MSR/@@download/ENCFF802MSR.bam 26.1 M 0 25.3 M 0.968 SE 50 50 native 0.0 M 21.1 M 20.7 M 0.795 0.99 0.99 93.48 170 1.03 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd6cdba2-b815-4565-b013-e35b2527906c/@@download/cross_correlation_plot/ENCFF019ZET-ENCFF748PBU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB940YUD kevin-white:2015-1883 "ENCFF748PBU,ENCFF019ZET" "HiSeq 2000,HiSeq 2500" 2016-10-09T16:59:46.320146+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XQQ0jv1XYYX2Fxk3f5YB ENCSR737UST https://www.encodeproject.org/experiments/ENCSR737UST "recombinant protein,transcription factor" eGFP-ZNF740-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF338MSY https://www.encodeproject.org/files/ENCFF338MSY/@@download/ENCFF338MSY.bam ENCFF698BAV https://www.encodeproject.org/files/ENCFF698BAV/@@download/ENCFF698BAV.bam 37.2 M 0 36.4 M 0.979 SE 50 50 native 0.0 M 30.3 M 29.8 M 0.800 0.99 0.99 91.58 150 1.02 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/71ebbf33-1a08-4906-a639-c9d6708980a9/@@download/cross_correlation_plot/ENCFF076JZZ-ENCFF717YOH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB004MQD kevin-white:2015-1884 "ENCFF717YOH,ENCFF076JZZ" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:00:25.225079+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XX00jv1zBYbxYJ5zzzZ9 ENCSR194IJN https://www.encodeproject.org/experiments/ENCSR194IJN "recombinant protein,transcription factor" eGFP-ZNF766-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF398UYF https://www.encodeproject.org/files/ENCFF398UYF/@@download/ENCFF398UYF.bam ENCFF269CMX https://www.encodeproject.org/files/ENCFF269CMX/@@download/ENCFF269CMX.bam 33.9 M 0 32.6 M 0.961 SE 50 50 native 0.0 M 27.0 M 25.4 M 0.751 0.98 0.98 55.50 165 1.10 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/0afe306f-998b-4c77-955b-407c09653435/@@download/cross_correlation_plot/ENCFF994DBJ-ENCFF962FCU_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB151ITS kevin-white:2016-173 "ENCFF962FCU,ENCFF994DBJ" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:07:35.555372+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kgQ0jv1zBYbxYJ5zzyz3 ENCSR194IJN https://www.encodeproject.org/experiments/ENCSR194IJN "recombinant protein,transcription factor" eGFP-ZNF766-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF227TEG https://www.encodeproject.org/files/ENCFF227TEG/@@download/ENCFF227TEG.bam ENCFF865KAK https://www.encodeproject.org/files/ENCFF865KAK/@@download/ENCFF865KAK.bam 32.7 M 0 31.4 M 0.960 SE 50 50 native 0.0 M 26.2 M 25.0 M 0.766 0.98 0.98 61.20 155 1.10 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc153aaf-d958-4412-932d-db7b661b256d/@@download/cross_correlation_plot/ENCFF862UUB-ENCFF734FMD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB027BBG kevin-white:2016-174 "ENCFF862UUB,ENCFF734FMD" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:07:18.549153+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kk00jv1f60PxyZ9JGKpy ENCSR257XVY https://www.encodeproject.org/experiments/ENCSR257XVY "recombinant protein,transcription factor" eGFP-ZNF83-human K562 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF180ZQP https://www.encodeproject.org/files/ENCFF180ZQP/@@download/ENCFF180ZQP.bam ENCFF768ZIJ https://www.encodeproject.org/files/ENCFF768ZIJ/@@download/ENCFF768ZIJ.bam 44.4 M 0 41.0 M 0.923 SE 50 50 native 0.0 M 33.9 M 31.3 M 0.705 0.97 0.97 34.89 165 1.04 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/26a32c8a-dfca-4296-8956-d7d9fe083913/@@download/cross_correlation_plot/ENCFF471BMT-ENCFF718QVM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB118KZH kevin-white:2016-385 "ENCFF718QVM,ENCFF471BMT" HiSeq 2500 2016-10-09T17:03:18.176510+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5xY00jv1v69xp00g4J2Qk ENCSR257XVY https://www.encodeproject.org/experiments/ENCSR257XVY "recombinant protein,transcription factor" eGFP-ZNF83-human K562 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF690YWW https://www.encodeproject.org/files/ENCFF690YWW/@@download/ENCFF690YWW.bam ENCFF223GIE https://www.encodeproject.org/files/ENCFF223GIE/@@download/ENCFF223GIE.bam 24.1 M 0 22.6 M 0.938 SE 50 50 native 0.0 M 18.8 M 18.1 M 0.749 0.98 0.98 46.98 155 1.04 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/24d20283-bc8d-4c27-9b66-ae5941da2193/@@download/cross_correlation_plot/ENCFF251YFI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB467KUL kevin-white:2016-386 ENCFF251YFI HiSeq 2500 2016-10-09T17:02:26.177393+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5xb00jv1v69xp00g4J2V1 ENCSR158PLQ https://www.encodeproject.org/experiments/ENCSR158PLQ control Control-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF163QIC https://www.encodeproject.org/files/ENCFF163QIC/@@download/ENCFF163QIC.bam ENCFF072VHG https://www.encodeproject.org/files/ENCFF072VHG/@@download/ENCFF072VHG.bam 68.3 M 0 66.9 M 0.981 SE 50 50 None 0.0 M 55.5 M 54.6 M 0.800 0.99 0.99 120.42 90 1.01 0.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/b8476f88-346d-4377-bd29-6d8e80976f66/@@download/cross_correlation_plot/ENCFF444LSU-ENCFF437ZGA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB331YDY kevin-white:2015-3425 "ENCFF444LSU,ENCFF437ZGA" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:16:14.917086+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq72j0369GbFx9y02x3zGJ ENCSR167UME https://www.encodeproject.org/experiments/ENCSR167UME control Control-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF422LHK https://www.encodeproject.org/files/ENCFF422LHK/@@download/ENCFF422LHK.bam ENCFF558JDT https://www.encodeproject.org/files/ENCFF558JDT/@@download/ENCFF558JDT.bam 39.7 M 0 38.6 M 0.974 SE 50 50 None 0.0 M 32.0 M 31.5 M 0.793 0.99 0.99 91.50 0 1.01 0.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/afde3ccf-1471-4764-8fdf-5768fef2e7ac/@@download/cross_correlation_plot/ENCFF860ICW-ENCFF406VEB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB129NGR kevin-white:2016-84 "ENCFF860ICW,ENCFF406VEB" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:15:48.724059+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq76003690KqX0q02qJpFj ENCSR646YPU https://www.encodeproject.org/experiments/ENCSR646YPU control Control-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF508CVZ https://www.encodeproject.org/files/ENCFF508CVZ/@@download/ENCFF508CVZ.bam ENCFF401AMX https://www.encodeproject.org/files/ENCFF401AMX/@@download/ENCFF401AMX.bam 22.8 M 0 22.1 M 0.972 SE 50 None 0.0 M 18.0 M 17.9 M 0.784 0.99 0.99 165.21 115 1.01 0.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6965fd8-8069-44f3-97f0-ea9ff111739e/@@download/cross_correlation_plot/ENCFF924SLY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB509LOI kevin-white:2015-3389 ENCFF924SLY HiSeq 2000 2016-05-06T18:07:15.613523+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqVZQ0369GkFPvq42zg1k6 ENCSR713NUS https://www.encodeproject.org/experiments/ENCSR713NUS control Control-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF156EDZ https://www.encodeproject.org/files/ENCFF156EDZ/@@download/ENCFF156EDZ.bam ENCFF820QYF https://www.encodeproject.org/files/ENCFF820QYF/@@download/ENCFF820QYF.bam 48.8 M 0 47.8 M 0.980 SE 50 50 None 0.0 M 39.6 M 38.9 M 0.798 0.98 0.99 71.59 90 1.01 0.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/094cdc91-4876-4010-a75b-d7eb7ad872ef/@@download/cross_correlation_plot/ENCFF053XWI-ENCFF563LBV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB400YZY kevin-white:2015-2721 "ENCFF053XWI,ENCFF563LBV" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:07:56.448963+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqXZ003692Fy2Pk02vGVYp ENCSR744FDJ https://www.encodeproject.org/experiments/ENCSR744FDJ control Control-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF362FTX https://www.encodeproject.org/files/ENCFF362FTX/@@download/ENCFF362FTX.bam ENCFF731MOG https://www.encodeproject.org/files/ENCFF731MOG/@@download/ENCFF731MOG.bam 42.1 M 0 40.5 M 0.961 SE 50 None 0.0 M 33.4 M 32.9 M 0.781 0.99 0.99 102.72 0 1.01 0.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/8cd5b20e-e885-4815-b7c4-3eed5aa25a68/@@download/cross_correlation_plot/ENCFF679NOJ-ENCFF067NSO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB780ATZ kevin-white:2016-90 "ENCFF067NSO,ENCFF679NOJ" "HiSeq 2000,HiSeq 2500" 2016-05-06T18:06:18.738373+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqYQQ03691Q4QQpZ2q8Bk3 ENCSR814KDE https://www.encodeproject.org/experiments/ENCSR814KDE control Control-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF604HFX https://www.encodeproject.org/files/ENCFF604HFX/@@download/ENCFF604HFX.bam ENCFF435XNC https://www.encodeproject.org/files/ENCFF435XNC/@@download/ENCFF435XNC.bam 23.1 M 0 22.7 M 0.982 SE 50 50 None 0.0 M 18.9 M 18.7 M 0.809 0.99 0.99 115.15 80 1.01 0.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/0403962e-2e2f-4310-ae93-ad2dbe47e45b/@@download/cross_correlation_plot/ENCFF610IKU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB342WII kevin-white:2015-3289 ENCFF610IKU HiSeq 2000 2016-05-06T18:03:06.038967+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqbk8036929FJGg42Xq27j ENCSR907JTZ https://www.encodeproject.org/experiments/ENCSR907JTZ control Control-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF754VNY https://www.encodeproject.org/files/ENCFF754VNY/@@download/ENCFF754VNY.bam ENCFF112NHD https://www.encodeproject.org/files/ENCFF112NHD/@@download/ENCFF112NHD.bam 43.2 M 0 42.6 M 0.984 SE 50 50 None 0.0 M 34.9 M 34.5 M 0.798 0.99 0.99 101.17 135 1.01 0.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/21b79627-79e6-4d2a-86e5-3a72e229424b/@@download/cross_correlation_plot/ENCFF256EJW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB593JAA kevin-white:2015-1420 ENCFF256EJW HiSeq 2500 2016-05-06T18:03:43.731421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqj9j03691Q4QQpZ2q8Byk ENCSR931XKA https://www.encodeproject.org/experiments/ENCSR931XKA control Control-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF938UEI https://www.encodeproject.org/files/ENCFF938UEI/@@download/ENCFF938UEI.bam ENCFF091CWD https://www.encodeproject.org/files/ENCFF091CWD/@@download/ENCFF091CWD.bam 22.4 M 0 22.0 M 0.983 SE 50 50 None 0.0 M 18.2 M 18.0 M 0.804 0.99 0.99 132.20 70 1.01 0.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/46de69d9-e0f1-4432-b16b-a86add5555a2/@@download/cross_correlation_plot/ENCFF608KKT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB184RSR kevin-white:2015-2102 ENCFF608KKT HiSeq 2500 2016-05-06T18:02:04.223946+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqjx8036929FJGg42Xq2B9 ENCSR965XFJ https://www.encodeproject.org/experiments/ENCSR965XFJ control Control-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF640BTE https://www.encodeproject.org/files/ENCFF640BTE/@@download/ENCFF640BTE.bam ENCFF877EAV https://www.encodeproject.org/files/ENCFF877EAV/@@download/ENCFF877EAV.bam 23.8 M 0 23.4 M 0.983 SE 50 50 None 0.0 M 19.4 M 19.2 M 0.807 0.99 0.99 137.10 0 1.01 0.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/22f19f82-1cba-40b6-b6e1-59a0f9a97b41/@@download/cross_correlation_plot/ENCFF787HQI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB572TTZ kevin-white:2015-2099 ENCFF787HQI HiSeq 2500 2016-05-06T18:02:08.109107+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqkKj036986q4kkQ2Q0Kyx ENCSR094ZCF https://www.encodeproject.org/experiments/ENCSR094ZCF "recombinant protein,transcription factor" eGFP-CEBPG-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF651NEA https://www.encodeproject.org/files/ENCFF651NEA/@@download/ENCFF651NEA.bam ENCFF629YDV https://www.encodeproject.org/files/ENCFF629YDV/@@download/ENCFF629YDV.bam 41.4 M 0 39.0 M 0.941 SE 50 50 native 0.0 M 32.2 M 31.3 M 0.757 0.97 0.97 39.52 205 1.02 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e557286-7eeb-4acf-b548-6aa6849db85f/@@download/cross_correlation_plot/ENCFF203HJN-ENCFF804ROV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB016TDO kevin-white:2015-2100 "ENCFF203HJN,ENCFF804ROV" HiSeq 2500 2016-10-09T17:02:18.610399+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6P900jv1k3ZgZP0qqvyB2 ENCSR094ZCF https://www.encodeproject.org/experiments/ENCSR094ZCF "recombinant protein,transcription factor" eGFP-CEBPG-human MCF-7 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF449ZQR https://www.encodeproject.org/files/ENCFF449ZQR/@@download/ENCFF449ZQR.bam ENCFF020HNC https://www.encodeproject.org/files/ENCFF020HNC/@@download/ENCFF020HNC.bam 36.7 M 0 34.8 M 0.949 SE 50 50 native 0.0 M 28.8 M 28.1 M 0.766 0.98 0.98 43.37 205 1.02 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ca27686-5c71-4d18-9b70-bbcebffef97c/@@download/cross_correlation_plot/ENCFF560POR-ENCFF184ZLD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB195BWC kevin-white:2015-2101 "ENCFF184ZLD,ENCFF560POR" HiSeq 2500 2016-10-09T17:01:36.311383+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6PF00jv1Y68V4KG8yz3B8 ENCSR505NMN https://www.encodeproject.org/experiments/ENCSR505NMN "recombinant protein,transcription factor" eGFP-E2F4-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF603DLZ https://www.encodeproject.org/files/ENCFF603DLZ/@@download/ENCFF603DLZ.bam ENCFF403JAH https://www.encodeproject.org/files/ENCFF403JAH/@@download/ENCFF403JAH.bam 40.0 M 0 19.2 M 0.481 SE 50 50 native 0.0 M 15.6 M 13.7 M 0.342 0.88 0.87 7.73 80 1.01 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbfc5b25-2502-42c3-afa7-5c87c7934c09/@@download/cross_correlation_plot/ENCFF401WRN-ENCFF343MJV_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB092YEJ kevin-white:2015-2722 "ENCFF343MJV,ENCFF401WRN" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:09:45.636943+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zbQ0jv1xPyfX78Yz4ggF ENCSR505NMN https://www.encodeproject.org/experiments/ENCSR505NMN "recombinant protein,transcription factor" eGFP-E2F4-human MCF-7 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF034JFG https://www.encodeproject.org/files/ENCFF034JFG/@@download/ENCFF034JFG.bam ENCFF544KGC https://www.encodeproject.org/files/ENCFF544KGC/@@download/ENCFF544KGC.bam 36.8 M 0 33.3 M 0.905 SE 50 50 native 0.0 M 27.3 M 26.4 M 0.717 0.97 0.97 30.95 70 1.01 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f18906d-ceba-4ee9-b37b-39d69f310246/@@download/cross_correlation_plot/ENCFF304WBQ-ENCFF584XMP_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB595SXQ kevin-white:2015-2723 "ENCFF304WBQ,ENCFF584XMP" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:12:19.916910+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zg00jv1vY92b0GYjVFg6 ENCSR475SOC https://www.encodeproject.org/experiments/ENCSR475SOC "recombinant protein,transcription factor" eGFP-ELF1-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF857SEI https://www.encodeproject.org/files/ENCFF857SEI/@@download/ENCFF857SEI.bam ENCFF602NEB https://www.encodeproject.org/files/ENCFF602NEB/@@download/ENCFF602NEB.bam 32.2 M 0 29.5 M 0.916 SE 50 50 native 0.0 M 24.1 M 23.6 M 0.733 0.99 0.99 76.76 180 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd053567-5d11-4ff0-b072-04f44905768d/@@download/cross_correlation_plot/ENCFF705GVK-ENCFF189KOF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB657ZQR kevin-white:2015-3426 "ENCFF189KOF,ENCFF705GVK" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:02:12.845249+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Kx80jv1q5825v91XY32y ENCSR475SOC https://www.encodeproject.org/experiments/ENCSR475SOC "recombinant protein,transcription factor" eGFP-ELF1-human MCF-7 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF229CPP https://www.encodeproject.org/files/ENCFF229CPP/@@download/ENCFF229CPP.bam ENCFF536TIM https://www.encodeproject.org/files/ENCFF536TIM/@@download/ENCFF536TIM.bam 43.9 M 0 40.9 M 0.932 SE 50 50 native 0.0 M 33.5 M 32.7 M 0.744 0.99 0.99 68.27 175 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/4123c454-5293-4afd-b059-b6d36438b7fd/@@download/cross_correlation_plot/ENCFF937AKL-ENCFF829DHH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB249MTQ kevin-white:2015-3427 "ENCFF829DHH,ENCFF937AKL" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:02:10.243292+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6KzQ0jv1yxz42848qkV8B ENCSR546KCN https://www.encodeproject.org/experiments/ENCSR546KCN "recombinant protein,transcription factor" eGFP-FOSL2-human MCF-7 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF526VWA https://www.encodeproject.org/files/ENCFF526VWA/@@download/ENCFF526VWA.bam ENCFF058DXE https://www.encodeproject.org/files/ENCFF058DXE/@@download/ENCFF058DXE.bam 42.7 M 0 41.9 M 0.982 SE 50 50 native 0.0 M 34.5 M 33.8 M 0.791 0.98 0.98 51.45 230 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/b88ab747-d1a0-437a-b847-980ade77d548/@@download/cross_correlation_plot/ENCFF463YWP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB352DLM kevin-white:2015-1422 ENCFF463YWP HiSeq 2500 2016-10-09T17:02:54.003808+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Pb80jv1XYYX2Fxk3f5Qb ENCSR546KCN https://www.encodeproject.org/experiments/ENCSR546KCN "recombinant protein,transcription factor" eGFP-FOSL2-human MCF-7 immortalized cell line 3 kevin-white ENCODE3 GRCh38 ENCFF121PXE https://www.encodeproject.org/files/ENCFF121PXE/@@download/ENCFF121PXE.bam ENCFF439TAT https://www.encodeproject.org/files/ENCFF439TAT/@@download/ENCFF439TAT.bam 23.7 M 0 23.3 M 0.981 SE 50 50 native 0.0 M 19.2 M 18.9 M 0.798 0.98 0.98 66.87 215 1.03 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/822a3356-f81b-497e-b9dc-29839bd7df1c/@@download/cross_correlation_plot/ENCFF198ANV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB030IKN kevin-white:2015-1423 ENCFF198ANV HiSeq 2500 2016-10-09T17:01:25.351773+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Pfj0jv1QxJBfj5Zb2q27 ENCSR038RXU https://www.encodeproject.org/experiments/ENCSR038RXU "recombinant protein,transcription factor" eGFP-GABPA-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF191KBY https://www.encodeproject.org/files/ENCFF191KBY/@@download/ENCFF191KBY.bam ENCFF021KDR https://www.encodeproject.org/files/ENCFF021KDR/@@download/ENCFF021KDR.bam 24.0 M 0 22.3 M 0.927 SE 50 50 native 0.0 M 18.4 M 18.1 M 0.753 0.98 0.98 57.03 205 1.01 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/bee89b0f-e4fd-499a-83f6-f8d08b2ddb03/@@download/cross_correlation_plot/ENCFF305ZJL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB207LKP kevin-white:2015-3290 ENCFF305ZJL HiSeq 2000 2016-10-09T17:02:57.366003+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv63yQ0jv1pBzjzVx0B7f54 ENCSR038RXU https://www.encodeproject.org/experiments/ENCSR038RXU "recombinant protein,transcription factor" eGFP-GABPA-human MCF-7 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF519GHQ https://www.encodeproject.org/files/ENCFF519GHQ/@@download/ENCFF519GHQ.bam ENCFF499ZDK https://www.encodeproject.org/files/ENCFF499ZDK/@@download/ENCFF499ZDK.bam 48.5 M 0 44.7 M 0.922 SE 50 50 native 0.0 M 37.0 M 35.7 M 0.736 0.97 0.97 30.28 170 1.01 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/3249212c-43b3-4c56-98f1-27a82e1cb410/@@download/cross_correlation_plot/ENCFF089FKI-ENCFF283JZA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB163THL kevin-white:2015-3291 "ENCFF283JZA,ENCFF089FKI" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:04:26.143413+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv640Q0jv1pBzjzVx0B7f5G ENCSR265WJC https://www.encodeproject.org/experiments/ENCSR265WJC "recombinant protein,transcription factor" eGFP-KLF4-human MCF-7 immortalized cell line 1 kevin-white ENCODE3 GRCh38 ENCFF043GOQ https://www.encodeproject.org/files/ENCFF043GOQ/@@download/ENCFF043GOQ.bam ENCFF315WME https://www.encodeproject.org/files/ENCFF315WME/@@download/ENCFF315WME.bam 33.5 M 0 30.5 M 0.910 SE 50 50 native 0.0 M 25.2 M 24.3 M 0.726 0.98 0.98 43.58 330 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/1898d7b6-2f82-46d6-aa53-9dfc8e3ca7fc/@@download/cross_correlation_plot/ENCFF765LUQ-ENCFF006QJD_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB509HTQ kevin-white:2016-82 "ENCFF006QJD,ENCFF765LUQ" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:32:49.176243+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5p380jv1b6Q2yZ51Zb5G1 ENCSR265WJC https://www.encodeproject.org/experiments/ENCSR265WJC "recombinant protein,transcription factor" eGFP-KLF4-human MCF-7 immortalized cell line 2 kevin-white ENCODE3 GRCh38 ENCFF790XOB https://www.encodeproject.org/files/ENCFF790XOB/@@download/ENCFF790XOB.bam ENCFF826HDR https://www.encodeproject.org/files/ENCFF826HDR/@@download/ENCFF826HDR.bam 34.1 M 0 32.0 M 0.939 SE 50 50 native 0.0 M 26.5 M 25.5 M 0.747 0.98 0.98 41.02 380 1.01 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb75386d-e034-40cd-b03d-268a0015d795/@@download/cross_correlation_plot/ENCFF277ODW-ENCFF542BMY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB135RYA kevin-white:2016-83 "ENCFF542BMY,ENCFF277ODW" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:32:59.647494+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5p5Q0jv1b6Q2yZ51Zb5G9 ENCSR125ZYC https://www.encodeproject.org/experiments/ENCSR125ZYC "recombinant protein,transcription factor" eGFP-KLF9-human MCF-7 immortalized cell line 3 kevin-white ENCODE3 GRCh38 ENCFF856JMS https://www.encodeproject.org/files/ENCFF856JMS/@@download/ENCFF856JMS.bam ENCFF899BOT https://www.encodeproject.org/files/ENCFF899BOT/@@download/ENCFF899BOT.bam 24.2 M 0 23.2 M 0.963 SE 50 50 native 0.0 M 19.3 M 18.9 M 0.782 0.98 0.98 52.65 220 1.08 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f54182d-de3e-4785-950a-d2b9f4f2e7bd/@@download/cross_correlation_plot/ENCFF611RZZ-ENCFF548OMB_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB804LOH kevin-white:2015-2971 "ENCFF548OMB,ENCFF611RZZ" "HiSeq 2000,HiSeq 2500" 2016-10-09T16:59:53.300199+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49vQ0jv1g5yGjfvVx0P4B ENCSR125ZYC https://www.encodeproject.org/experiments/ENCSR125ZYC "recombinant protein,transcription factor" eGFP-KLF9-human MCF-7 immortalized cell line 4 kevin-white ENCODE3 GRCh38 ENCFF692CNT https://www.encodeproject.org/files/ENCFF692CNT/@@download/ENCFF692CNT.bam ENCFF420ZDV https://www.encodeproject.org/files/ENCFF420ZDV/@@download/ENCFF420ZDV.bam 36.4 M 0 35.4 M 0.973 SE 50 50 native 0.0 M 29.3 M 28.6 M 0.785 0.98 0.98 44.91 210 1.06 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/5413e6ff-7bf9-4b7d-ac0f-5ff2f8136aab/@@download/cross_correlation_plot/ENCFF680CYZ-ENCFF097AUF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB215RJH kevin-white:2015-2972 "ENCFF680CYZ,ENCFF097AUF" "HiSeq 2000,HiSeq 2500" 2016-10-09T17:00:23.876443+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49y00jv1xPyfX78Yz4j4x ENCSR933UGQ https://www.encodeproject.org/experiments/ENCSR933UGQ control Control-human 22Rv1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF483ELD https://www.encodeproject.org/files/ENCFF483ELD/@@download/ENCFF483ELD.bam ENCFF083RXK https://www.encodeproject.org/files/ENCFF083RXK/@@download/ENCFF083RXK.bam 82.6 M 0 80.9 M 0.978 PE 100 100 native 33.9 M 0.0 M 33.6 M 0.813 0.99 0.99 103.03 350 1.03 3.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/e35e3f1c-895e-4245-9c39-6fc9b27bd835/@@download/cross_correlation_plot/ENCFF868MWOENCFF745ZXO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB509KOU michael-snyder:L-2748 "ENCFF868MWO,ENCFF745ZXO" HiSeq 2000 2016-11-25T03:16:24.162592+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQj0Q03692k1PXjJQV38py ENCSR933UGQ https://www.encodeproject.org/experiments/ENCSR933UGQ control Control-human 22Rv1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF769UET https://www.encodeproject.org/files/ENCFF769UET/@@download/ENCFF769UET.bam ENCFF856LCB https://www.encodeproject.org/files/ENCFF856LCB/@@download/ENCFF856LCB.bam 101.8 M 0 99.7 M 0.979 PE 100 100 native 42.2 M 0.0 M 41.9 M 0.822 0.99 0.99 132.90 250 1.02 4.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/948cbf3b-3bd2-42c1-87fd-fe937fc0289e/@@download/cross_correlation_plot/ENCFF926HWQENCFF776RZI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB527PRR michael-snyder:L-2749 "ENCFF926HWQ,ENCFF776RZI" HiSeq 2000 2016-11-25T03:19:13.386048+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQj5803693q3XFPQy0v999 ENCSR847XGE https://www.encodeproject.org/experiments/ENCSR847XGE "transcription factor,RNA binding protein" CTCF-human 22Rv1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF766RZV https://www.encodeproject.org/files/ENCFF766RZV/@@download/ENCFF766RZV.bam ENCFF864IHK https://www.encodeproject.org/files/ENCFF864IHK/@@download/ENCFF864IHK.bam 62.5 M 0 61.0 M 0.976 PE 100 100 native 25.7 M 0.0 M 24.3 M 0.777 0.94 0.94 17.49 375 1.16 2.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/943a9bde-c567-4152-8c73-da7af9fd5b77/@@download/cross_correlation_plot/ENCFF953SOHENCFF672YYT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB204YIW michael-snyder:L-2752 "ENCFF953SOH,ENCFF672YYT" HiSeq 2000 2017-03-23T18:10:13.930136+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QG5Q03690Q7X4FXKgzBXB ENCSR847XGE https://www.encodeproject.org/experiments/ENCSR847XGE "transcription factor,RNA binding protein" CTCF-human 22Rv1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF371TIX https://www.encodeproject.org/files/ENCFF371TIX/@@download/ENCFF371TIX.bam ENCFF914ZQU https://www.encodeproject.org/files/ENCFF914ZQU/@@download/ENCFF914ZQU.bam 119.1 M 0 116.7 M 0.980 PE 100 100 native 50.5 M 0.0 M 44.5 M 0.748 0.88 0.88 8.16 350 1.21 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/227ffe25-b2a0-4846-8853-30a869d57dc8/@@download/cross_correlation_plot/ENCFF780PZKENCFF581WJZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB110WLV michael-snyder:L-2753 "ENCFF581WJZ,ENCFF780PZK" HiSeq 2000 2017-03-23T18:11:28.660000+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39XV3j03693465GFX6Xz1qP ENCSR857PBV https://www.encodeproject.org/experiments/ENCSR857PBV "transcription factor,RNA binding protein" CTCF-human 22Rv1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF514UAV https://www.encodeproject.org/files/ENCFF514UAV/@@download/ENCFF514UAV.bam ENCFF825AAU https://www.encodeproject.org/files/ENCFF825AAU/@@download/ENCFF825AAU.bam 106.5 M 0 104.5 M 0.982 PE 100 100 native 45.2 M 0.0 M 42.4 M 0.797 0.94 0.94 15.87 325 1.16 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/931e6b25-d1d0-4228-a263-575090f7e7e2/@@download/cross_correlation_plot/ENCFF743IYAENCFF262QVS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB407QHY michael-snyder:L-2750 "ENCFF743IYA,ENCFF262QVS" HiSeq 2000 2017-02-22T05:31:10.105771+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Q30036926qyxPB8gvxJK ENCSR857PBV https://www.encodeproject.org/experiments/ENCSR857PBV "transcription factor,RNA binding protein" CTCF-human 22Rv1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF319QUU https://www.encodeproject.org/files/ENCFF319QUU/@@download/ENCFF319QUU.bam ENCFF646IVA https://www.encodeproject.org/files/ENCFF646IVA/@@download/ENCFF646IVA.bam 112.8 M 0 110.7 M 0.981 PE 100 100 native 48.0 M 0.0 M 40.4 M 0.716 0.84 0.84 5.92 310 1.24 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cc47001-b1c6-4d90-9b1e-5fef3691a189/@@download/cross_correlation_plot/ENCFF860SCIENCFF066XRO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB947RFP michael-snyder:L-2751 "ENCFF066XRO,ENCFF860SCI" HiSeq 2000 2017-02-22T05:29:58.979222+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5QF003699BJ8f3PbkYB0J ENCSR391NPE https://www.encodeproject.org/experiments/ENCSR391NPE "histone,histone modification,narrow histone mark" H3K27ac-human 22Rv1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF421QFK https://www.encodeproject.org/files/ENCFF421QFK/@@download/ENCFF421QFK.bam ENCFF978LWS https://www.encodeproject.org/files/ENCFF978LWS/@@download/ENCFF978LWS.bam 86.8 M 0 85.3 M 0.982 PE 100 100 native 37.6 M 0.0 M 36.6 M 0.842 0.97 0.97 35.15 340 1.27 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6af8c54-e242-4ac7-9035-7649bcd57332/@@download/cross_correlation_plot/ENCFF502OEMENCFF415BYG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB605NOX michael-snyder:L-2754 "ENCFF415BYG,ENCFF502OEM" HiSeq 2000 2017-03-01T07:28:03.839115+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pv76Q0369F38kf8bgQYYz3 ENCSR391NPE https://www.encodeproject.org/experiments/ENCSR391NPE "histone,histone modification,narrow histone mark" H3K27ac-human 22Rv1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF025ZEN https://www.encodeproject.org/files/ENCFF025ZEN/@@download/ENCFF025ZEN.bam ENCFF835RMS https://www.encodeproject.org/files/ENCFF835RMS/@@download/ENCFF835RMS.bam 51.2 M 0 50.2 M 0.980 PE 100 100 native 22.3 M 0.0 M 21.4 M 0.837 0.96 0.96 25.24 330 1.39 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/ffc86b06-df1f-4719-b2de-68e3fe25d4b6/@@download/cross_correlation_plot/ENCFF426UOTENCFF957IAM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB149SBT michael-snyder:L-2755 "ENCFF957IAM,ENCFF426UOT" HiSeq 2000 2017-03-01T04:07:43.658440+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pv7P80369069bb8ZbZv7Kq ENCSR777CQW https://www.encodeproject.org/experiments/ENCSR777CQW "histone,histone modification,narrow histone mark" H3K27ac-human 22Rv1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF728TTH https://www.encodeproject.org/files/ENCFF728TTH/@@download/ENCFF728TTH.bam ENCFF044WEA https://www.encodeproject.org/files/ENCFF044WEA/@@download/ENCFF044WEA.bam 100.9 M 0 99.1 M 0.982 PE 100 100 native 43.5 M 0.0 M 42.3 M 0.838 0.97 0.97 36.65 360 1.25 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3080d23-8d3f-4de6-a50f-7f6d88bce496/@@download/cross_correlation_plot/ENCFF289XSZENCFF121KWI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB989TCG michael-snyder:L-2756 "ENCFF289XSZ,ENCFF121KWI" HiSeq 2000 2017-03-02T04:46:49.916493+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pv6Y80369PKpFGF3GyQ5gV ENCSR777CQW https://www.encodeproject.org/experiments/ENCSR777CQW "histone,histone modification,narrow histone mark" H3K27ac-human 22Rv1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF131ZIS https://www.encodeproject.org/files/ENCFF131ZIS/@@download/ENCFF131ZIS.bam ENCFF365JXX https://www.encodeproject.org/files/ENCFF365JXX/@@download/ENCFF365JXX.bam 86.9 M 0 85.2 M 0.980 PE 100 100 native 37.7 M 0.0 M 34.8 M 0.800 0.92 0.92 12.67 370 1.35 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/4eeff213-6470-44af-88cf-4c03ae704e7a/@@download/cross_correlation_plot/ENCFF724WMYENCFF443ZYO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB707NFY michael-snyder:L-2757 "ENCFF443ZYO,ENCFF724WMY" HiSeq 2000 2017-03-01T07:15:54.927192+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pv6x80369Kqf928b53Yf4v ENCSR246MLJ https://www.encodeproject.org/experiments/ENCSR246MLJ transcription factor ZFX-human 22Rv1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF342JBG https://www.encodeproject.org/files/ENCFF342JBG/@@download/ENCFF342JBG.bam ENCFF724INS https://www.encodeproject.org/files/ENCFF724INS/@@download/ENCFF724INS.bam 93.7 M 0 91.3 M 0.974 PE 100 100 native 38.1 M 0.0 M 37.5 M 0.800 0.98 0.98 66.31 290 1.03 3.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/1149893e-135c-44b9-8a87-76e37d946a02/@@download/cross_correlation_plot/ENCFF170NRXENCFF697UGT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB133TRK michael-snyder:L-3298 "ENCFF697UGT,ENCFF170NRX" HiSeq 2000 2017-03-04T18:13:30.057689+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv37803691jGpk3j84pKZF ENCSR246MLJ https://www.encodeproject.org/experiments/ENCSR246MLJ transcription factor ZFX-human 22Rv1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF714QBW https://www.encodeproject.org/files/ENCFF714QBW/@@download/ENCFF714QBW.bam ENCFF690XDZ https://www.encodeproject.org/files/ENCFF690XDZ/@@download/ENCFF690XDZ.bam 70.4 M 0 68.5 M 0.972 PE 100 100 native 28.2 M 0.0 M 27.6 M 0.783 0.98 0.98 41.96 335 1.03 6.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/da51a064-25cc-49d4-91ea-f53965c0f1ca/@@download/cross_correlation_plot/ENCFF328CPOENCFF761YLA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB516BSK michael-snyder:L-3299 "ENCFF328CPO,ENCFF761YLA" HiSeq 2000 2017-03-04T18:09:00.072966+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv3Y803694x4vF5KZfq8VV ENCSR000DYJ https://www.encodeproject.org/experiments/ENCSR000DYJ transcription factor BHLHE40-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF848YES https://www.encodeproject.org/files/ENCFF848YES/@@download/ENCFF848YES.bam ENCFF480ECU https://www.encodeproject.org/files/ENCFF480ECU/@@download/ENCFF480ECU.bam 30.0 M 0 29.6 M 0.988 SE 36 36 native 0.0 M 22.3 M 20.7 M 0.690 0.93 0.93 14.21 130 1.03 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/565b93ff-f4a9-4977-b15e-2353d6a558c3/@@download/cross_correlation_plot/ENCFF000VOD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALW ENCFF000VOD Illumina Genome Analyzer 2016-12-12T17:19:34.362358+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1624Kj036933PVVJ7Qq013Y ENCSR000DYJ https://www.encodeproject.org/experiments/ENCSR000DYJ transcription factor BHLHE40-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF207EHB https://www.encodeproject.org/files/ENCFF207EHB/@@download/ENCFF207EHB.bam ENCFF996IYP https://www.encodeproject.org/files/ENCFF996IYP/@@download/ENCFF996IYP.bam 25.1 M 0 24.3 M 0.969 SE 36 36 native 0.0 M 18.2 M 17.7 M 0.705 0.98 0.98 41.02 90 1.03 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/02126e09-6fde-423e-9edb-84572f53ed4e/@@download/cross_correlation_plot/ENCFF000VOF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATW ENCFF000VOF Illumina Genome Analyzer 2016-12-12T17:19:00.760013+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1624Y0036933PVVJ7Qq013v ENCSR000DYI https://www.encodeproject.org/experiments/ENCSR000DYI transcription factor CEBPB-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF142OZB https://www.encodeproject.org/files/ENCFF142OZB/@@download/ENCFF142OZB.bam ENCFF526NIP https://www.encodeproject.org/files/ENCFF526NIP/@@download/ENCFF526NIP.bam 30.5 M 0 30.3 M 0.991 SE 36 36 native 0.0 M 23.1 M 21.9 M 0.716 0.95 0.95 21.82 125 1.24 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/b12741ca-996f-4534-8159-e1959c0229c2/@@download/cross_correlation_plot/ENCFF000VOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKS ENCFF000VOL Illumina Genome Analyzer 2016-12-11T04:09:53.039772+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1657pQ0369PJ8BP63qf1Fjg ENCSR000DYI https://www.encodeproject.org/experiments/ENCSR000DYI transcription factor CEBPB-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF912PMA https://www.encodeproject.org/files/ENCFF912PMA/@@download/ENCFF912PMA.bam ENCFF466UIS https://www.encodeproject.org/files/ENCFF466UIS/@@download/ENCFF466UIS.bam 23.7 M 0 23.2 M 0.979 SE 36 36 native 0.0 M 17.3 M 16.7 M 0.703 0.97 0.97 33.43 110 1.38 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f211d39-d865-47a8-99a4-0110f3b3dbbe/@@download/cross_correlation_plot/ENCFF000VON.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKT ENCFF000VON Illumina Genome Analyzer 2016-12-11T04:08:30.776610+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1657z00369BJyPz9fb9qY8b ENCSR610YRT https://www.encodeproject.org/experiments/ENCSR610YRT control Control-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF189KJV https://www.encodeproject.org/files/ENCFF189KJV/@@download/ENCFF189KJV.bam ENCFF794LPI https://www.encodeproject.org/files/ENCFF794LPI/@@download/ENCFF794LPI.bam 73.0 M 0 71.7 M 0.981 PE 100 100 None 31.9 M 0.0 M 29.6 M 0.811 0.93 0.93 14.21 200 1.06 8.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/cedfb7c7-4c67-42cd-ba85-35bbac50f5e2/@@download/cross_correlation_plot/ENCFF002EIKENCFF002EIM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB944FQY michael-snyder:790_B_TruSeq_TTAGGC "ENCFF002EIK,ENCFF002EIM" HiSeq 2000 2016-05-06T18:13:59.637001+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQgj0369PPK4xgv2b79GX ENCSR610YRT https://www.encodeproject.org/experiments/ENCSR610YRT control Control-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF419UIG https://www.encodeproject.org/files/ENCFF419UIG/@@download/ENCFF419UIG.bam ENCFF200GTH https://www.encodeproject.org/files/ENCFF200GTH/@@download/ENCFF200GTH.bam 65.8 M 0 64.4 M 0.979 PE 100 100 None 28.7 M 0.0 M 27.2 M 0.825 0.95 0.95 19.56 200 1.07 8.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f13686c-963f-44d3-8c72-8eb7553e8d9f/@@download/cross_correlation_plot/ENCFF002EILENCFF002EIP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB023YGD michael-snyder:790_B_TruSeq_TGACCA "ENCFF002EIL,ENCFF002EIP" HiSeq 2000 2016-05-06T18:13:02.660223+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQkQ0369PPK4xgv2b79Gv ENCSR949BZP https://www.encodeproject.org/experiments/ENCSR949BZP control Control-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF918AJW https://www.encodeproject.org/files/ENCFF918AJW/@@download/ENCFF918AJW.bam ENCFF563GBN https://www.encodeproject.org/files/ENCFF563GBN/@@download/ENCFF563GBN.bam 41.6 M 0 41.1 M 0.986 SE 36 36 None 0.0 M 31.9 M 30.8 M 0.740 0.97 0.98 41.55 110 1.02 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff27d9ec-7941-437b-9f83-4c3bf497c851/@@download/cross_correlation_plot/ENCFF002ECM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB504NHD michael-snyder:Input_A549_Rep1 ENCFF002ECM Illumina Genome Analyzer IIx 2016-05-06T18:03:35.803972+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqk50036961GyjjQ2QP8y7 ENCSR949BZP https://www.encodeproject.org/experiments/ENCSR949BZP control Control-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF949XNJ https://www.encodeproject.org/files/ENCFF949XNJ/@@download/ENCFF949XNJ.bam ENCFF424XCA https://www.encodeproject.org/files/ENCFF424XCA/@@download/ENCFF424XCA.bam 42.2 M 0 41.3 M 0.978 SE 36 36 None 0.0 M 31.9 M 30.5 M 0.722 0.96 0.96 28.21 130 1.01 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/f15bafe7-042a-47b7-a30f-3cde301c15b8/@@download/cross_correlation_plot/ENCFF002ECL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB404QMH michael-snyder:Input_A549_Rep2 ENCFF002ECL Illumina Genome Analyzer IIx 2016-05-06T18:02:57.887091+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqk700369PPK4xgv2b79g8 ENCSR000DYD https://www.encodeproject.org/experiments/ENCSR000DYD "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF835YDD https://www.encodeproject.org/files/ENCFF835YDD/@@download/ENCFF835YDD.bam ENCFF757DXC https://www.encodeproject.org/files/ENCFF757DXC/@@download/ENCFF757DXC.bam 31.9 M 0 31.1 M 0.974 SE 36 36 native 0.0 M 24.6 M 20.5 M 0.642 0.84 0.85 6.74 120 1.86 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/e16c7702-f38e-4ce0-b1b2-49d7aa1041ba/@@download/cross_correlation_plot/ENCFF000VPD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACF ENCFF000VPD Illumina Genome Analyzer 2016-12-10T18:07:03.888785+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1628P803697K4B1J71pxzPY ENCSR000DYD https://www.encodeproject.org/experiments/ENCSR000DYD "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF280TYK https://www.encodeproject.org/files/ENCFF280TYK/@@download/ENCFF280TYK.bam ENCFF944BLM https://www.encodeproject.org/files/ENCFF944BLM/@@download/ENCFF944BLM.bam 29.2 M 0 28.6 M 0.980 SE 36 36 native 0.0 M 22.0 M 20.3 M 0.695 0.93 0.93 15.14 120 1.24 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b823c20-2819-4d5a-9513-7dec47c1f463/@@download/cross_correlation_plot/ENCFF000VPF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACG ENCFF000VPF Illumina Genome Analyzer 2016-12-10T17:50:49.873645+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1628Z003698ZxQY8q63X7p2 ENCSR623KNM https://www.encodeproject.org/experiments/ENCSR623KNM transcription factor ELK1-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF826GGN https://www.encodeproject.org/files/ENCFF826GGN/@@download/ENCFF826GGN.bam ENCFF586LSC https://www.encodeproject.org/files/ENCFF586LSC/@@download/ENCFF586LSC.bam 27.8 M 0 27.5 M 0.987 SE 36 36 native 0.0 M 20.9 M 18.2 M 0.653 0.87 0.87 7.31 120 1.04 2.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd1b61f3-a842-450b-a446-c2c369ec808b/@@download/cross_correlation_plot/ENCFF002EAB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB266MOM michael-snyder:ELK-1_1277-1_A549_Rep1 ENCFF002EAB Illumina Genome Analyzer IIx 2016-10-09T17:09:37.609296+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40F80jv1XYYX2Fxk3f4x2 ENCSR623KNM https://www.encodeproject.org/experiments/ENCSR623KNM transcription factor ELK1-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF757GXN https://www.encodeproject.org/files/ENCFF757GXN/@@download/ENCFF757GXN.bam ENCFF522IVZ https://www.encodeproject.org/files/ENCFF522IVZ/@@download/ENCFF522IVZ.bam 20.3 M 0 19.6 M 0.962 SE 36 36 native 0.0 M 14.8 M 13.5 M 0.666 0.92 0.92 11.85 110 1.03 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/18301872-df5c-413f-8ed9-8d4e1dcabe6a/@@download/cross_correlation_plot/ENCFF002DZZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB938FQI michael-snyder:ELK-1_1277-1_Rb_A549_Rep3 ENCFF002DZZ Illumina Genome Analyzer IIx 2016-10-09T17:08:58.821117+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40GQ0jv1XYYX2Fxk3f4xB ENCSR473SUA https://www.encodeproject.org/experiments/ENCSR473SUA transcription factor ESRRA-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF549LBG https://www.encodeproject.org/files/ENCFF549LBG/@@download/ENCFF549LBG.bam ENCFF646VNO https://www.encodeproject.org/files/ENCFF646VNO/@@download/ENCFF646VNO.bam 32.3 M 0 31.7 M 0.981 SE 36 36 native 0.0 M 23.9 M 21.0 M 0.649 0.88 0.88 7.97 120 1.04 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b12951f-34ed-4154-b2c7-cafa18082882/@@download/cross_correlation_plot/ENCFF002EAE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB625NLD michael-snyder:ERRa_sc-66882_A549_Rep1 ENCFF002EAE Illumina Genome Analyzer IIx 2016-10-09T17:00:11.507046+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4X500jv1xPyfX78Yz4jFz ENCSR473SUA https://www.encodeproject.org/experiments/ENCSR473SUA transcription factor ESRRA-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF542CFD https://www.encodeproject.org/files/ENCFF542CFD/@@download/ENCFF542CFD.bam ENCFF595EKU https://www.encodeproject.org/files/ENCFF595EKU/@@download/ENCFF595EKU.bam 29.4 M 0 28.2 M 0.960 SE 36 36 native 0.0 M 21.3 M 19.5 M 0.662 0.92 0.92 12.01 115 1.03 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdafec9a-2ca7-4103-9368-72e12a7473fa/@@download/cross_correlation_plot/ENCFF002EAF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB829XDO michael-snyder:ERRa_sc-66882_Rb_A549_Rep2 ENCFF002EAF Illumina Genome Analyzer IIx 2016-10-09T16:59:52.950561+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4X6Q0jv1f60PxyZ9JGPV0 ENCSR996DUT https://www.encodeproject.org/experiments/ENCSR996DUT transcription factor JUN-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF755QDV https://www.encodeproject.org/files/ENCFF755QDV/@@download/ENCFF755QDV.bam ENCFF830WDM https://www.encodeproject.org/files/ENCFF830WDM/@@download/ENCFF830WDM.bam 30.7 M 0 30.4 M 0.989 SE 36 36 native 0.0 M 22.7 M 20.2 M 0.657 0.89 0.89 8.80 140 1.04 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b22dc42-7a77-422d-ba54-785af59b4e7d/@@download/cross_correlation_plot/ENCFF002DZV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB747WRD michael-snyder:c-Jun_sc-1694_A549_Rep1 ENCFF002DZV Illumina Genome Analyzer IIx 2016-10-29T18:02:16.038124+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B20pj0jv1ZfxGgzJ8XqbKj ENCSR996DUT https://www.encodeproject.org/experiments/ENCSR996DUT transcription factor JUN-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF853NYR https://www.encodeproject.org/files/ENCFF853NYR/@@download/ENCFF853NYR.bam ENCFF959LON https://www.encodeproject.org/files/ENCFF959LON/@@download/ENCFF959LON.bam 26.9 M 0 26.1 M 0.971 SE 36 36 native 0.0 M 19.6 M 18.9 M 0.702 0.97 0.97 33.60 90 1.03 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/766508da-05a4-49ed-87ea-ea6cfdf28483/@@download/cross_correlation_plot/ENCFF002DZU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB481CKC michael-snyder:c-Jun_sc-1694_A549_Rep2 ENCFF002DZU Illumina Genome Analyzer IIx 2016-10-29T18:02:08.668259+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B20x00jv1x3VFb9bq4F6kB ENCSR000DYG https://www.encodeproject.org/experiments/ENCSR000DYG transcription factor MAX-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF820GHI https://www.encodeproject.org/files/ENCFF820GHI/@@download/ENCFF820GHI.bam ENCFF531PPG https://www.encodeproject.org/files/ENCFF531PPG/@@download/ENCFF531PPG.bam 28.5 M 0 27.7 M 0.972 SE 36 36 native 0.0 M 20.9 M 20.2 M 0.708 0.97 0.97 31.86 95 1.06 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/0637405a-bd4e-4113-9391-6913ec75b6b4/@@download/cross_correlation_plot/ENCFF000VPU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAO ENCFF000VPU Illumina Genome Analyzer 2016-12-11T04:52:08.814629+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1661Z00369GF0YB1zjPf750 ENCSR636YLV https://www.encodeproject.org/experiments/ENCSR636YLV "RNA binding protein,transcription factor" MAZ-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF754RTV https://www.encodeproject.org/files/ENCFF754RTV/@@download/ENCFF754RTV.bam ENCFF011PQC https://www.encodeproject.org/files/ENCFF011PQC/@@download/ENCFF011PQC.bam 23.5 M 0 22.4 M 0.951 SE 36 36 native 0.0 M 16.7 M 16.1 M 0.686 0.97 0.97 34.60 90 1.03 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f20c5ee-44c8-4506-b6c2-bc8d0678f8fb/@@download/cross_correlation_plot/ENCFF002EAJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB203OIN michael-snyder:Maz_ab85725_A549_Rep2 ENCFF002EAJ Illumina Genome Analyzer IIx 2016-10-09T17:01:16.645798+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4QZQ0jv1vY92b0GYjVG6V ENCSR636YLV https://www.encodeproject.org/experiments/ENCSR636YLV "RNA binding protein,transcription factor" MAZ-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF215YFO https://www.encodeproject.org/files/ENCFF215YFO/@@download/ENCFF215YFO.bam ENCFF839GUJ https://www.encodeproject.org/files/ENCFF839GUJ/@@download/ENCFF839GUJ.bam 33.8 M 0 33.3 M 0.987 SE 36 36 native 0.0 M 25.5 M 23.7 M 0.702 0.93 0.93 14.14 130 1.02 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/588345e6-be44-4885-a5ba-059da3a30fea/@@download/cross_correlation_plot/ENCFF002EAI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB733OBS michael-snyder:Maz_ab85725_Rb_A549_Rep3 ENCFF002EAI Illumina Genome Analyzer IIx 2016-10-09T17:01:15.852182+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Qf00jv1xPyfX78Yz4jBZ ENCSR000DYC https://www.encodeproject.org/experiments/ENCSR000DYC transcription factor MYC-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF367WEI https://www.encodeproject.org/files/ENCFF367WEI/@@download/ENCFF367WEI.bam ENCFF683CHH https://www.encodeproject.org/files/ENCFF683CHH/@@download/ENCFF683CHH.bam 29.3 M 0 28.8 M 0.983 SE 36 36 native 0.0 M 22.1 M 18.8 M 0.642 0.86 0.85 6.47 115 1.07 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/68d819f0-7aef-493e-bf52-b143aa9f8cca/@@download/cross_correlation_plot/ENCFF000VOU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANT ENCFF000VOU Illumina Genome Analyzer 2016-12-11T03:09:28.890006+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164BPj03693JQ1ZJ95zxGpb ENCSR000DYC https://www.encodeproject.org/experiments/ENCSR000DYC transcription factor MYC-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF866MOR https://www.encodeproject.org/files/ENCFF866MOR/@@download/ENCFF866MOR.bam ENCFF408TPS https://www.encodeproject.org/files/ENCFF408TPS/@@download/ENCFF408TPS.bam 31.3 M 0 30.5 M 0.974 SE 36 36 native 0.0 M 23.0 M 21.8 M 0.697 0.95 0.95 21.30 115 1.03 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/41339530-09cb-485e-a44a-b181b9723ad2/@@download/cross_correlation_plot/ENCFF000VOW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANS ENCFF000VOW Illumina Genome Analyzer 2016-12-11T03:15:37.433572+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Bb003695Kj1j8qPQgkZY ENCSR584GHV https://www.encodeproject.org/experiments/ENCSR584GHV transcription factor NFE2L2-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF004JMG https://www.encodeproject.org/files/ENCFF004JMG/@@download/ENCFF004JMG.bam ENCFF190IFF https://www.encodeproject.org/files/ENCFF190IFF/@@download/ENCFF190IFF.bam 28.6 M 0 28.3 M 0.993 SE 36 36 native 0.0 M 21.5 M 20.5 M 0.718 0.96 0.96 22.80 130 1.05 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e9df18b-bb7a-46e4-a5fe-78c403a6df5b/@@download/cross_correlation_plot/ENCFF002EAK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB179UUZ michael-snyder:Nrf2_sc-13032_A549_Rep1 ENCFF002EAK Illumina Genome Analyzer IIx 2016-10-09T17:02:01.846050+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4KpQ0jv1vY92b0GYjVG41 ENCSR584GHV https://www.encodeproject.org/experiments/ENCSR584GHV transcription factor NFE2L2-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF003TGD https://www.encodeproject.org/files/ENCFF003TGD/@@download/ENCFF003TGD.bam ENCFF725VLJ https://www.encodeproject.org/files/ENCFF725VLJ/@@download/ENCFF725VLJ.bam 28.8 M 0 27.9 M 0.972 SE 36 36 native 0.0 M 21.0 M 20.2 M 0.701 0.96 0.96 27.89 100 1.05 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/34c2c046-4897-4664-81bb-79c52f53101c/@@download/cross_correlation_plot/ENCFF002EAH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB966UUM michael-snyder:Nrf2_sc-13032_A549_Rep2 ENCFF002EAH Illumina Genome Analyzer IIx 2016-10-09T17:02:03.619170+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Kv00jv1zBYbxYJ5zzzQk ENCSR000DYF https://www.encodeproject.org/experiments/ENCSR000DYF "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF131TIR https://www.encodeproject.org/files/ENCFF131TIR/@@download/ENCFF131TIR.bam ENCFF534RCN https://www.encodeproject.org/files/ENCFF534RCN/@@download/ENCFF534RCN.bam 30.4 M 0 30.1 M 0.991 SE 36 36 native 0.0 M 23.0 M 22.1 M 0.727 0.96 0.96 28.03 95 1.04 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/06c96bcd-1104-47d6-a3ce-5919cff363d6/@@download/cross_correlation_plot/ENCFF000VPZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASH ENCFF000VPZ Illumina Genome Analyzer 2016-12-10T19:15:21.450175+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162J3003697k5jKB6pJ7qbv ENCSR000DYF https://www.encodeproject.org/experiments/ENCSR000DYF "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF069MCY https://www.encodeproject.org/files/ENCFF069MCY/@@download/ENCFF069MCY.bam ENCFF277FFH https://www.encodeproject.org/files/ENCFF277FFH/@@download/ENCFF277FFH.bam 29.0 M 0 28.4 M 0.979 SE 36 36 native 0.0 M 21.5 M 20.9 M 0.721 0.97 0.97 39.29 60 1.05 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/66a2100c-3345-4d8d-a31e-87c489842ac5/@@download/cross_correlation_plot/ENCFF000VQB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASG ENCFF000VQB Illumina Genome Analyzer 2016-12-10T19:00:56.376037+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162J7j0369BJyPz9fb9qVb1 ENCSR496AXR https://www.encodeproject.org/experiments/ENCSR496AXR control rabbit-IgG-control-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF857MFM https://www.encodeproject.org/files/ENCFF857MFM/@@download/ENCFF857MFM.bam ENCFF051WWL https://www.encodeproject.org/files/ENCFF051WWL/@@download/ENCFF051WWL.bam 24.1 M 0 23.9 M 0.990 SE 36 36 native 0.0 M 18.2 M 15.2 M 0.631 0.84 0.83 5.64 130 1.04 2.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/26845ee8-ed1c-4a94-adb3-edfc3f5b7166/@@download/cross_correlation_plot/ENCFF000VPI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACN ENCFF000VPI Illumina Genome Analyzer 2016-10-26T17:36:45.614768+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082b980369Bj2bF0JP9JJxf ENCSR496AXR https://www.encodeproject.org/experiments/ENCSR496AXR control rabbit-IgG-control-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF777NWU https://www.encodeproject.org/files/ENCFF777NWU/@@download/ENCFF777NWU.bam ENCFF751VDM https://www.encodeproject.org/files/ENCFF751VDM/@@download/ENCFF751VDM.bam 28.7 M 0 27.5 M 0.956 SE 36 36 native 0.0 M 20.5 M 19.6 M 0.683 0.96 0.96 25.99 80 1.02 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d2ef3ee-fb73-4c8a-b426-cc0911f1c291/@@download/cross_correlation_plot/ENCFF000VPK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB083KQY ENCFF000VPK Illumina Genome Analyzer 2016-10-26T17:37:05.953964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082bJ80369GK9p461P313PY ENCSR871XML https://www.encodeproject.org/experiments/ENCSR871XML control rabbit-IgG-control-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF593HFQ https://www.encodeproject.org/files/ENCFF593HFQ/@@download/ENCFF593HFQ.bam ENCFF097AAA https://www.encodeproject.org/files/ENCFF097AAA/@@download/ENCFF097AAA.bam 83.4 M 0 81.8 M 0.980 PE 100 None 36.3 M 0.0 M 33.4 M 0.801 0.92 0.92 12.50 155 1.06 4.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d9b6ed7-0e8c-436b-adb6-9d998ca31b16/@@download/cross_correlation_plot/ENCFF002EJFENCFF002EJD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB355WWU michael-snyder:791_B_TruSeq_CAGATC "ENCFF002EJD,ENCFF002EJF" HiSeq 2000 2016-05-06T18:11:05.415391+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqgb003691Q4QQpZ2q8By7 ENCSR871XML https://www.encodeproject.org/experiments/ENCSR871XML control rabbit-IgG-control-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF625HWV https://www.encodeproject.org/files/ENCFF625HWV/@@download/ENCFF625HWV.bam ENCFF638XTT https://www.encodeproject.org/files/ENCFF638XTT/@@download/ENCFF638XTT.bam 79.6 M 0 78.0 M 0.980 PE 100 None 34.7 M 0.0 M 30.8 M 0.774 0.89 0.89 8.66 155 1.07 4.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2f84125-6ef9-4f2e-b526-a5aa528142b7/@@download/cross_correlation_plot/ENCFF002EJIENCFF002EJB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB640VOY michael-snyder:791_B_TruSeq_GATCAG "ENCFF002EJI,ENCFF002EJB" HiSeq 2000 2016-05-06T18:09:49.635718+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqgg00369PPK4xgv2b79b6 ENCSR000DYE https://www.encodeproject.org/experiments/ENCSR000DYE transcription factor RAD21-human A549 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF520FBS https://www.encodeproject.org/files/ENCFF520FBS/@@download/ENCFF520FBS.bam ENCFF443LIY https://www.encodeproject.org/files/ENCFF443LIY/@@download/ENCFF443LIY.bam 31.3 M 0 31.1 M 0.992 SE 36 36 native 0.0 M 23.9 M 21.7 M 0.693 0.91 0.91 11.00 120 1.13 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/00caa8fb-968b-461e-8409-b180bd00f3f3/@@download/cross_correlation_plot/ENCFF000VQI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACJ ENCFF000VQI Illumina Genome Analyzer 2016-12-11T03:24:22.734746+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Pg00369KbxV61z4GFvFg ENCSR000DYE https://www.encodeproject.org/experiments/ENCSR000DYE transcription factor RAD21-human A549 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF287VUW https://www.encodeproject.org/files/ENCFF287VUW/@@download/ENCFF287VUW.bam ENCFF670MRT https://www.encodeproject.org/files/ENCFF670MRT/@@download/ENCFF670MRT.bam 30.2 M 0 29.3 M 0.971 SE 36 36 native 0.0 M 22.1 M 21.3 M 0.705 0.97 0.97 31.56 100 1.09 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/17287cd7-9ea7-47f5-9265-18261f2c7728/@@download/cross_correlation_plot/ENCFF000VQK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFR ENCFF000VQK Illumina Genome Analyzer 2016-12-11T03:24:03.267288+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164PqQ0369PvYp91zK1PxBP ENCSR064LJN https://www.encodeproject.org/experiments/ENCSR064LJN transcription factor RFX5-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF057AUM https://www.encodeproject.org/files/ENCFF057AUM/@@download/ENCFF057AUM.bam ENCFF355XGR https://www.encodeproject.org/files/ENCFF355XGR/@@download/ENCFF355XGR.bam 71.7 M 0 70.0 M 0.976 PE 100 100 native 31.3 M 0.0 M 22.9 M 0.638 0.73 0.72 3.39 215 1.14 3.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5454820-16b2-41cd-8390-71b4749290f3/@@download/cross_correlation_plot/ENCFF002EJAENCFF002EIY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB189SWO michael-snyder:790_A_TruSeq_TTAGGC "ENCFF002EIY,ENCFF002EJA" HiSeq 2000 2016-10-29T18:05:11.055298+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B25Qj0jv1kpQzk2JB6KzXV ENCSR064LJN https://www.encodeproject.org/experiments/ENCSR064LJN transcription factor RFX5-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF850BEV https://www.encodeproject.org/files/ENCFF850BEV/@@download/ENCFF850BEV.bam ENCFF980GCQ https://www.encodeproject.org/files/ENCFF980GCQ/@@download/ENCFF980GCQ.bam 67.5 M 0 65.1 M 0.965 PE 100 100 native 29.0 M 0.0 M 25.9 M 0.768 0.89 0.89 9.28 250 1.11 4.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef0c6b7e-2a1c-4d18-8f1b-7ef174ac0fdb/@@download/cross_correlation_plot/ENCFF002EJGENCFF002EJJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB221OEV michael-snyder:790_A_TruSeq_TGACCA "ENCFF002EJJ,ENCFF002EJG" HiSeq 2000 2016-10-29T18:05:19.696357+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B25YQ0jv1xg5PX69583j4J ENCSR513XQX https://www.encodeproject.org/experiments/ENCSR513XQX transcription factor SIN3A-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF590UVB https://www.encodeproject.org/files/ENCFF590UVB/@@download/ENCFF590UVB.bam ENCFF749VOD https://www.encodeproject.org/files/ENCFF749VOD/@@download/ENCFF749VOD.bam 67.2 M 0 65.3 M 0.972 PE 100 100 native 29.2 M 0.0 M 24.1 M 0.718 0.83 0.82 5.41 215 1.14 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/f846d0bf-6522-4d81-b96e-ac912dcb8c84/@@download/cross_correlation_plot/ENCFF002EJKENCFF002EJO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB382QVT michael-snyder:790_B_TruSeq_ATCACG "ENCFF002EJK,ENCFF002EJO" HiSeq 2000 2016-10-09T17:13:02.619205+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zk80jv1zBYbxYJ5zzz3K ENCSR513XQX https://www.encodeproject.org/experiments/ENCSR513XQX transcription factor SIN3A-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF053PLI https://www.encodeproject.org/files/ENCFF053PLI/@@download/ENCFF053PLI.bam ENCFF624RPG https://www.encodeproject.org/files/ENCFF624RPG/@@download/ENCFF624RPG.bam 76.8 M 0 75.0 M 0.977 PE 100 100 native 33.5 M 0.0 M 31.3 M 0.816 0.94 0.94 15.44 175 1.11 2.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c866c2ea-fcf3-45ac-af39-bac6a2aef1b4/@@download/cross_correlation_plot/ENCFF002EJUENCFF002EJN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB354CYM michael-snyder:790_B_TruSeq_CGATGT "ENCFF002EJN,ENCFF002EJU" HiSeq 2000 2016-10-09T17:14:32.454627+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zpj0jv1XYYX2Fxk3f4vY ENCSR481YWD https://www.encodeproject.org/experiments/ENCSR481YWD transcription factor SMC3-human A549 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF677VYD https://www.encodeproject.org/files/ENCFF677VYD/@@download/ENCFF677VYD.bam ENCFF201YWK https://www.encodeproject.org/files/ENCFF201YWK/@@download/ENCFF201YWK.bam 26.2 M 0 26.0 M 0.991 SE 36 36 native 0.0 M 19.9 M 18.4 M 0.701 0.93 0.92 12.92 130 1.04 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/639d2983-d3f7-4472-8ad2-2093a430a77e/@@download/cross_correlation_plot/ENCFF160OSF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB148MTX michael-snyder:L-1251 ENCFF160OSF Illumina Genome Analyzer IIx 2016-10-09T17:08:18.457977+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fg80jv1XYYX2Fxk3f4XP ENCSR481YWD https://www.encodeproject.org/experiments/ENCSR481YWD transcription factor SMC3-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF533DRO https://www.encodeproject.org/files/ENCFF533DRO/@@download/ENCFF533DRO.bam ENCFF886RIX https://www.encodeproject.org/files/ENCFF886RIX/@@download/ENCFF886RIX.bam 29.0 M 0 28.2 M 0.971 SE 36 36 native 0.0 M 21.3 M 20.5 M 0.705 0.96 0.96 28.98 110 1.16 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d5d54db-7c31-4d37-9c45-83f563693027/@@download/cross_correlation_plot/ENCFF742IYU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB696EQC michael-snyder:L-1263 ENCFF742IYU Illumina Genome Analyzer IIx 2016-10-09T17:08:17.752077+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fjQ0jv1g5yGjfvVx0KYP ENCSR897MYK https://www.encodeproject.org/experiments/ENCSR897MYK transcription factor SREBF1-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF788IFN https://www.encodeproject.org/files/ENCFF788IFN/@@download/ENCFF788IFN.bam ENCFF751XYE https://www.encodeproject.org/files/ENCFF751XYE/@@download/ENCFF751XYE.bam 84.3 M 0 82.5 M 0.980 PE 100 100 native 36.8 M 0.0 M 34.3 M 0.813 0.93 0.93 14.58 205 1.07 6.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/03bc0262-080b-458e-9655-54fe8c1f90c0/@@download/cross_correlation_plot/ENCFF002EMEENCFF002EMH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB327ZYR michael-snyder:792_A_TruSeq_ATCACG "ENCFF002EME,ENCFF002EMH" HiSeq 2000 2016-10-09T17:16:17.467341+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bg00jv1QxJBfj5Zb2p9x ENCSR897MYK https://www.encodeproject.org/experiments/ENCSR897MYK transcription factor SREBF1-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF224BFU https://www.encodeproject.org/files/ENCFF224BFU/@@download/ENCFF224BFU.bam ENCFF979FRI https://www.encodeproject.org/files/ENCFF979FRI/@@download/ENCFF979FRI.bam 94.1 M 0 92.2 M 0.979 PE 100 100 native 40.8 M 0.0 M 38.8 M 0.824 0.95 0.95 20.35 190 1.05 5.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/df9add45-733c-4a7a-beda-0f30d34e4336/@@download/cross_correlation_plot/ENCFF002EMIENCFF002EMK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB782WCF michael-snyder:792_A_TruSeq_CGATGT "ENCFF002EMK,ENCFF002EMI" HiSeq 2000 2016-10-09T17:17:49.921556+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bjQ0jv1vY92b0GYjVFJ7 ENCSR638QYO https://www.encodeproject.org/experiments/ENCSR638QYO transcription factor SREBF2-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF151NRC https://www.encodeproject.org/files/ENCFF151NRC/@@download/ENCFF151NRC.bam ENCFF411FPM https://www.encodeproject.org/files/ENCFF411FPM/@@download/ENCFF411FPM.bam 81.5 M 0 79.7 M 0.977 PE 100 100 native 35.3 M 0.0 M 26.5 M 0.651 0.75 0.74 3.71 215 1.11 3.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/750a2535-7b1e-4f4f-9c9e-9d4a08b668e6/@@download/cross_correlation_plot/ENCFF002EMJENCFF002EML.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB771NWT michael-snyder:792_A_TruSeq_TTAGGC "ENCFF002EML,ENCFF002EMJ" HiSeq 2000 2016-10-09T17:05:10.646639+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45QQ0jv1XYYX2Fxk3f532 ENCSR638QYO https://www.encodeproject.org/experiments/ENCSR638QYO transcription factor SREBF2-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF374OTD https://www.encodeproject.org/files/ENCFF374OTD/@@download/ENCFF374OTD.bam ENCFF321QNV https://www.encodeproject.org/files/ENCFF321QNV/@@download/ENCFF321QNV.bam 88.6 M 0 85.9 M 0.970 PE 100 100 native 38.0 M 0.0 M 36.8 M 0.830 0.97 0.97 30.42 175 1.06 4.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/af78f877-2a77-44c8-901c-569f8a9db2b7/@@download/cross_correlation_plot/ENCFF002EMNENCFF002EMM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB258LYK michael-snyder:792_A_TruSeq_TGACCA "ENCFF002EMM,ENCFF002EMN" HiSeq 2000 2016-10-09T17:07:08.786546+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45X00jv1XvFGkBjjfjQFf ENCSR563FBT https://www.encodeproject.org/experiments/ENCSR563FBT transcription factor USF2-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF647MYR https://www.encodeproject.org/files/ENCFF647MYR/@@download/ENCFF647MYR.bam ENCFF585XNM https://www.encodeproject.org/files/ENCFF585XNM/@@download/ENCFF585XNM.bam 73.4 M 0 72.0 M 0.982 PE 100 100 native 32.0 M 0.0 M 30.2 M 0.824 0.95 0.95 18.35 190 1.17 2.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/44cc9672-009e-459b-b9b0-866fa4781c75/@@download/cross_correlation_plot/ENCFF002EJLENCFF002EJS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB106SWR michael-snyder:791_A_TruSeq_ATCACG "ENCFF002EJS,ENCFF002EJL" HiSeq 2000 2016-10-29T18:05:37.948013+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B271j0jv1X404175P5YZb9 ENCSR563FBT https://www.encodeproject.org/experiments/ENCSR563FBT transcription factor USF2-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF645HSB https://www.encodeproject.org/files/ENCFF645HSB/@@download/ENCFF645HSB.bam ENCFF928RQP https://www.encodeproject.org/files/ENCFF928RQP/@@download/ENCFF928RQP.bam 75.5 M 0 74.2 M 0.983 PE 100 100 native 33.0 M 0.0 M 30.1 M 0.798 0.91 0.91 11.47 205 1.17 3.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/21cef1cf-7a6f-42bd-9c08-fe268a620a71/@@download/cross_correlation_plot/ENCFF002EJQENCFF002EJT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB276VMN michael-snyder:791_A_TruSeq_CGATGT "ENCFF002EJT,ENCFF002EJQ" HiSeq 2000 2016-10-29T18:05:56.626654+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B274Q0jv1V3377YJjkvV8y ENCSR277OOQ https://www.encodeproject.org/experiments/ENCSR277OOQ "RNA binding protein,transcription factor" ZC3H11A-human A549 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF246BAG https://www.encodeproject.org/files/ENCFF246BAG/@@download/ENCFF246BAG.bam ENCFF735SGD https://www.encodeproject.org/files/ENCFF735SGD/@@download/ENCFF735SGD.bam 77.1 M 0 75.6 M 0.981 PE 100 100 native 33.4 M 0.0 M 31.2 M 0.809 0.93 0.93 14.84 200 1.07 8.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/7b74b623-fd6b-415e-8a75-ec2bcc2f43f7/@@download/cross_correlation_plot/ENCFF002EJMENCFF002EJP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB034KPQ michael-snyder:791_A_TruSeq_CAGATC "ENCFF002EJP,ENCFF002EJM" HiSeq 2000 2016-10-29T18:06:42.746026+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B23XQ0jv1b140QP5B2xKfq ENCSR277OOQ https://www.encodeproject.org/experiments/ENCSR277OOQ "RNA binding protein,transcription factor" ZC3H11A-human A549 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF281QAQ https://www.encodeproject.org/files/ENCFF281QAQ/@@download/ENCFF281QAQ.bam ENCFF594XDV https://www.encodeproject.org/files/ENCFF594XDV/@@download/ENCFF594XDV.bam 75.6 M 0 74.3 M 0.982 PE 100 100 native 32.9 M 0.0 M 29.5 M 0.781 0.90 0.90 9.52 200 1.07 11.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c20e285-0876-4eae-be7a-179719c5ab67/@@download/cross_correlation_plot/ENCFF002EJVENCFF002EJR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB070PKR michael-snyder:791_A_TruSeq_GATCAG "ENCFF002EJV,ENCFF002EJR" HiSeq 2000 2016-10-29T18:05:56.720381+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B23bQ0jv1zQyG3V5B45f1p ENCSR015WSU https://www.encodeproject.org/experiments/ENCSR015WSU control Control-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF527GPC https://www.encodeproject.org/files/ENCFF527GPC/@@download/ENCFF527GPC.bam ENCFF818UIH https://www.encodeproject.org/files/ENCFF818UIH/@@download/ENCFF818UIH.bam 84.9 M 0 83.1 M 0.978 PE 100 100 native 36.4 M 0.0 M 30.7 M 0.723 0.86 0.86 7.08 185 1.07 8.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/8aa5a029-4931-4456-9b87-4b815cd7caf0/@@download/cross_correlation_plot/ENCFF024EUMENCFF108WLC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB383FSQ michael-snyder:L-3325 "ENCFF024EUM,ENCFF108WLC" HiSeq 4000 2017-03-23T18:09:15.027440+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QFj8036921PX13ByY2PQj ENCSR091EBM https://www.encodeproject.org/experiments/ENCSR091EBM control Control-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF838GUO https://www.encodeproject.org/files/ENCFF838GUO/@@download/ENCFF838GUO.bam ENCFF925USL https://www.encodeproject.org/files/ENCFF925USL/@@download/ENCFF925USL.bam 72.7 M 0 70.6 M 0.971 PE 100 100 native 30.5 M 0.0 M 28.8 M 0.793 0.95 0.95 19.96 205 1.06 3.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a9441ad-db46-4cef-91ec-b95f67636ef4/@@download/cross_correlation_plot/ENCFF757YZFENCFF409WTS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB481DIR michael-snyder:L-2088 "ENCFF757YZF,ENCFF409WTS" HiSeq 2000 2016-10-27T22:32:48.006837+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bY9j03695140QP5B2vxqv ENCSR135FYV https://www.encodeproject.org/experiments/ENCSR135FYV control Control-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF626LKC https://www.encodeproject.org/files/ENCFF626LKC/@@download/ENCFF626LKC.bam ENCFF720SCO https://www.encodeproject.org/files/ENCFF720SCO/@@download/ENCFF720SCO.bam 151.4 M 0 145.6 M 0.961 PE 100 100 native 61.9 M 0.0 M 52.5 M 0.694 0.85 0.85 6.54 220 1.03 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/44b9fbb5-b604-4572-8cc2-2369c6f0a2cd/@@download/cross_correlation_plot/ENCFF650PTLENCFF050RJA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB255SAN michael-snyder:L-2089 "ENCFF050RJA,ENCFF650PTL" HiSeq 4000 2016-10-27T22:35:55.399181+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bYz00369BX1xqb1B80vGX ENCSR641MGI https://www.encodeproject.org/experiments/ENCSR641MGI control Control-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF556CQT https://www.encodeproject.org/files/ENCFF556CQT/@@download/ENCFF556CQT.bam ENCFF379CJB https://www.encodeproject.org/files/ENCFF379CJB/@@download/ENCFF379CJB.bam 112.2 M 0 109.7 M 0.978 PE 100 100 native 49.1 M 0.0 M 38.5 M 0.687 0.79 0.79 4.66 155 1.06 4.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/05e66d30-4197-489c-9edd-bd86db47a4c0/@@download/cross_correlation_plot/ENCFF959EYLENCFF541ZMR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB371YSN michael-snyder:L-3217 "ENCFF541ZMR,ENCFF959EYL" HiSeq 4000 2017-01-27T06:31:30.406802+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253XBQ036958ZB25bBz7zQ0 ENCSR867NUH https://www.encodeproject.org/experiments/ENCSR867NUH control Control-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF418QRN https://www.encodeproject.org/files/ENCFF418QRN/@@download/ENCFF418QRN.bam ENCFF630YHO https://www.encodeproject.org/files/ENCFF630YHO/@@download/ENCFF630YHO.bam 75.7 M 0 74.1 M 0.978 PE 100 100 native 32.6 M 0.0 M 30.3 M 0.801 0.93 0.93 14.63 170 1.07 6.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/38d2a37f-e192-4da4-9691-504a1a9b13cc/@@download/cross_correlation_plot/ENCFF194EWFENCFF203FOV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB742FWC michael-snyder:L-3164 "ENCFF194EWF,ENCFF203FOV" HiSeq 4000 2016-12-10T02:58:54.896741+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QpX00369BV55708G9qV1v ENCSR014GSQ https://www.encodeproject.org/experiments/ENCSR014GSQ "transcription factor,RNA binding protein" CTCF-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF403PJI https://www.encodeproject.org/files/ENCFF403PJI/@@download/ENCFF403PJI.bam ENCFF543QNM https://www.encodeproject.org/files/ENCFF543QNM/@@download/ENCFF543QNM.bam 70.4 M 0 67.9 M 0.966 PE 100 100 native 29.9 M 0.0 M 27.4 M 0.778 0.91 0.91 11.40 170 1.34 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc8bf881-ab25-49b2-90cb-50f418ad8fcc/@@download/cross_correlation_plot/ENCFF263EXZENCFF489JBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB590HIH michael-snyder:L-3170 "ENCFF263EXZ,ENCFF489JBV" HiSeq 4000 2016-12-10T02:30:24.023288+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qqxj03695v47P6433J98k ENCSR450BLH https://www.encodeproject.org/experiments/ENCSR450BLH "transcription factor,RNA binding protein" CTCF-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF693ANZ https://www.encodeproject.org/files/ENCFF693ANZ/@@download/ENCFF693ANZ.bam ENCFF675UXC https://www.encodeproject.org/files/ENCFF675UXC/@@download/ENCFF675UXC.bam 172.3 M 0 159.9 M 0.928 PE 100 100 native 70.0 M 0.0 M 49.6 M 0.576 0.71 0.70 3.28 220 1.46 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/e90f518a-d241-4793-bc6b-ca69e235ec04/@@download/cross_correlation_plot/ENCFF725BGJENCFF125ONW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB324GBE michael-snyder:L-2084 "ENCFF725BGJ,ENCFF125ONW" HiSeq 4000 2016-10-27T22:31:30.516600+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bk5j0369PQyG3V5B4503v ENCSR770IWO https://www.encodeproject.org/experiments/ENCSR770IWO "transcription factor,RNA binding protein" CTCF-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF490SNQ https://www.encodeproject.org/files/ENCFF490SNQ/@@download/ENCFF490SNQ.bam ENCFF662WGE https://www.encodeproject.org/files/ENCFF662WGE/@@download/ENCFF662WGE.bam 83.6 M 0 81.1 M 0.970 PE 100 100 native 36.7 M 0.0 M 29.4 M 0.703 0.80 0.80 4.84 155 2.55 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/31f6f6bf-ea35-428c-9d0e-ee873207658e/@@download/cross_correlation_plot/ENCFF857XTLENCFF530VUW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB733WTO michael-snyder:L-3216 "ENCFF857XTL,ENCFF530VUW" HiSeq 4000 2017-01-27T06:29:55.788359+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253XPj0369P8ygG5ZVzbbX5 ENCSR899JSO https://www.encodeproject.org/experiments/ENCSR899JSO "transcription factor,RNA binding protein" CTCF-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF069JAM https://www.encodeproject.org/files/ENCFF069JAM/@@download/ENCFF069JAM.bam ENCFF365NOY https://www.encodeproject.org/files/ENCFF365NOY/@@download/ENCFF365NOY.bam 58.5 M 0 55.5 M 0.949 PE 100 100 native 24.4 M 0.0 M 22.6 M 0.774 0.93 0.93 13.69 200 1.79 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/194252c4-8d6f-47e5-8694-bd94bc612ccd/@@download/cross_correlation_plot/ENCFF448IBUENCFF981LZA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB777JGU michael-snyder:L-2083 "ENCFF448IBU,ENCFF981LZA" HiSeq 2000 2016-10-27T22:22:20.271407+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bz9j03695140QP5B2vxzz ENCSR031KWR https://www.encodeproject.org/experiments/ENCSR031KWR transcription factor POLR2A-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF099SWT https://www.encodeproject.org/files/ENCFF099SWT/@@download/ENCFF099SWT.bam ENCFF066IPF https://www.encodeproject.org/files/ENCFF066IPF/@@download/ENCFF066IPF.bam 96.9 M 0 94.7 M 0.977 PE 100 100 native 42.0 M 0.0 M 35.4 M 0.731 0.85 0.84 6.34 165 1.11 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/a3df784c-d416-42ee-be3b-b4dfcee3697c/@@download/cross_correlation_plot/ENCFF411THNENCFF180UGD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB552BUI michael-snyder:L-3320 "ENCFF180UGD,ENCFF411THN" HiSeq 4000 2017-03-21T07:26:33.086912+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3814x803695yZVKPb68XQQZ ENCSR412QGD https://www.encodeproject.org/experiments/ENCSR412QGD transcription factor POLR2A-human adrenal gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF539DRE https://www.encodeproject.org/files/ENCFF539DRE/@@download/ENCFF539DRE.bam ENCFF313NFO https://www.encodeproject.org/files/ENCFF313NFO/@@download/ENCFF313NFO.bam 137.8 M 0 134.0 M 0.973 PE 100 100 native 60.1 M 0.0 M 44.6 M 0.647 0.74 0.74 3.71 180 1.63 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e41f45c-e299-4253-8886-9e1b227fcc03/@@download/cross_correlation_plot/ENCFF933ONWENCFF464OZG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB227GJR michael-snyder:L-3224 "ENCFF933ONW,ENCFF464OZG" HiSeq 4000 2017-01-27T06:28:51.491164+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253YjQ0369BzbZ3J09z0Xf7 ENCSR894EKG https://www.encodeproject.org/experiments/ENCSR894EKG control Control-human ascending aorta tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF023NJF https://www.encodeproject.org/files/ENCFF023NJF/@@download/ENCFF023NJF.bam ENCFF834ZWK https://www.encodeproject.org/files/ENCFF834ZWK/@@download/ENCFF834ZWK.bam 108.0 M 0 103.0 M 0.955 PE 100 100 native 44.8 M 0.0 M 36.9 M 0.684 0.83 0.82 5.63 175 1.05 5.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/92f1f4a2-fb74-43da-a5b1-8b0c0468f4bc/@@download/cross_correlation_plot/ENCFF321IEZENCFF479WFS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB165TOA michael-snyder:L-3190 "ENCFF321IEZ,ENCFF479WFS" HiSeq 4000 2016-12-10T04:43:13.403368+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qkzj036993F1b953B4BYf ENCSR960MDF https://www.encodeproject.org/experiments/ENCSR960MDF "transcription factor,RNA binding protein" CTCF-human ascending aorta tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF353ZVY https://www.encodeproject.org/files/ENCFF353ZVY/@@download/ENCFF353ZVY.bam ENCFF724QEU https://www.encodeproject.org/files/ENCFF724QEU/@@download/ENCFF724QEU.bam 93.9 M 0 82.3 M 0.877 PE 100 100 native 36.0 M 0.0 M 27.6 M 0.588 0.77 0.77 4.25 165 1.13 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/94fff1d0-7d5c-4a63-b555-7bbb14a95713/@@download/cross_correlation_plot/ENCFF803COBENCFF866GSF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB657XON michael-snyder:L-3197 "ENCFF866GSF,ENCFF803COB" HiSeq 4000 2016-12-10T03:09:27.778433+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QvK003695F8Bk64ff01qx ENCSR079WBX https://www.encodeproject.org/experiments/ENCSR079WBX control Control-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF308UCP https://www.encodeproject.org/files/ENCFF308UCP/@@download/ENCFF308UCP.bam ENCFF906NHW https://www.encodeproject.org/files/ENCFF906NHW/@@download/ENCFF906NHW.bam 106.5 M 0 102.4 M 0.961 PE 100 100 native 43.7 M 0.0 M 38.3 M 0.719 0.88 0.88 8.16 205 1.05 2.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb886c65-f615-424c-a0ed-bc6d60a17a62/@@download/cross_correlation_plot/ENCFF097TMNENCFF704QNQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB132YGX michael-snyder:L-2055 "ENCFF097TMN,ENCFF704QNQ" HiSeq 4000 2016-11-02T23:15:28.621265+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbFyj03691bG0YJGQg1pyz ENCSR326AHF https://www.encodeproject.org/experiments/ENCSR326AHF control Control-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF533JZM https://www.encodeproject.org/files/ENCFF533JZM/@@download/ENCFF533JZM.bam ENCFF354FTJ https://www.encodeproject.org/files/ENCFF354FTJ/@@download/ENCFF354FTJ.bam 80.1 M 0 78.5 M 0.980 PE 100 100 native 35.3 M 0.0 M 31.1 M 0.776 0.88 0.88 8.49 150 1.08 4.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/3528c43e-2e69-48e6-8239-fe54bf7088d1/@@download/cross_correlation_plot/ENCFF400DBCENCFF764QLI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB974YKX michael-snyder:L-3113 "ENCFF400DBC,ENCFF764QLI" HiSeq 4000 2016-10-27T22:28:33.436711+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bggQ03695YX1xgJBKFkY1 ENCSR462SLN https://www.encodeproject.org/experiments/ENCSR462SLN control Control-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF831EFP https://www.encodeproject.org/files/ENCFF831EFP/@@download/ENCFF831EFP.bam ENCFF073ZEZ https://www.encodeproject.org/files/ENCFF073ZEZ/@@download/ENCFF073ZEZ.bam 114.2 M 0 108.5 M 0.950 PE 100 100 native 46.6 M 0.0 M 41.5 M 0.726 0.90 0.90 10.17 200 1.05 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd9a1e21-7df6-45ea-8da2-e3a62d8704f2/@@download/cross_correlation_plot/ENCFF319YKDENCFF687OGN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB139JJM michael-snyder:L-2051 "ENCFF319YKD,ENCFF687OGN" HiSeq 4000 2016-11-02T23:19:56.889128+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbBYj03697pP8fGV9bzzK4 ENCSR676WCI https://www.encodeproject.org/experiments/ENCSR676WCI control Control-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF395VIK https://www.encodeproject.org/files/ENCFF395VIK/@@download/ENCFF395VIK.bam ENCFF248PGS https://www.encodeproject.org/files/ENCFF248PGS/@@download/ENCFF248PGS.bam 63.2 M 0 61.6 M 0.975 PE 100 100 native 26.5 M 0.0 M 25.2 M 0.796 0.95 0.95 19.91 200 1.07 4.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/6784394e-1e6a-4868-b931-73b39afcad7d/@@download/cross_correlation_plot/ENCFF355CRYENCFF860HKS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB132YGX michael-snyder:L-2055 "ENCFF355CRY,ENCFF860HKS" HiSeq 2000 2016-11-25T03:10:13.215599+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQjfj03697fgyK1xFjYq3G ENCSR853XCA https://www.encodeproject.org/experiments/ENCSR853XCA control Control-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF607WQU https://www.encodeproject.org/files/ENCFF607WQU/@@download/ENCFF607WQU.bam ENCFF538WBD https://www.encodeproject.org/files/ENCFF538WBD/@@download/ENCFF538WBD.bam 73.1 M 0 70.2 M 0.961 PE 100 100 native 30.5 M 0.0 M 26.8 M 0.733 0.88 0.88 8.14 135 1.08 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1af9493-fe3d-4ac4-bf0e-76ed211b8406/@@download/cross_correlation_plot/ENCFF878DLIENCFF568ZUY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB246XUY michael-snyder:L-3116 "ENCFF878DLI,ENCFF568ZUY" HiSeq 4000 2016-10-27T22:13:20.888646+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08by5j03694q32PPxBJ6b3B ENCSR265PFQ https://www.encodeproject.org/experiments/ENCSR265PFQ "transcription factor,RNA binding protein" CTCF-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF651ZZS https://www.encodeproject.org/files/ENCFF651ZZS/@@download/ENCFF651ZZS.bam ENCFF204VWV https://www.encodeproject.org/files/ENCFF204VWV/@@download/ENCFF204VWV.bam 74.8 M 0 71.1 M 0.951 PE 100 100 native 30.8 M 0.0 M 29.6 M 0.791 0.96 0.96 25.48 190 2.36 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/fac90cab-5147-4c3f-ac5a-7ef629e75ff3/@@download/cross_correlation_plot/ENCFF207HTTENCFF244AUG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB993ADU michael-snyder:L-1963 "ENCFF207HTT,ENCFF244AUG" HiSeq 2000 2016-11-25T03:12:17.112329+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQgbQ03692FXJff1QzKj3f ENCSR307PFP https://www.encodeproject.org/experiments/ENCSR307PFP "transcription factor,RNA binding protein" CTCF-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF260NKL https://www.encodeproject.org/files/ENCFF260NKL/@@download/ENCFF260NKL.bam ENCFF451OJW https://www.encodeproject.org/files/ENCFF451OJW/@@download/ENCFF451OJW.bam 165.6 M 0 155.2 M 0.937 PE 100 100 native 66.7 M 0.0 M 60.1 M 0.726 0.91 0.91 10.94 195 1.60 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/4fe3530c-991d-4ec4-b857-91819c2318e6/@@download/cross_correlation_plot/ENCFF031QUDENCFF794JCH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB266NHN michael-snyder:L-1943 "ENCFF031QUD,ENCFF794JCH" HiSeq 4000 2016-11-02T23:22:28.940486+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbBjQ0369GGYp0V19j80Vy ENCSR408XTO https://www.encodeproject.org/experiments/ENCSR408XTO "transcription factor,RNA binding protein" CTCF-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF124ZGE https://www.encodeproject.org/files/ENCFF124ZGE/@@download/ENCFF124ZGE.bam ENCFF044KLO https://www.encodeproject.org/files/ENCFF044KLO/@@download/ENCFF044KLO.bam 65.2 M 0 63.8 M 0.978 PE 100 100 native 28.9 M 0.0 M 26.8 M 0.823 0.93 0.93 14.19 150 3.90 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/12e2d138-508b-44d3-a71b-c16c1fad687c/@@download/cross_correlation_plot/ENCFF163EIHENCFF947LDP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB405IOP michael-snyder:L-3114 "ENCFF163EIH,ENCFF947LDP" HiSeq 4000 2016-10-27T22:26:14.492086+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bjQ80369GJ6xQfbB7F5xB ENCSR484DDO https://www.encodeproject.org/experiments/ENCSR484DDO "transcription factor,RNA binding protein" CTCF-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF221DPL https://www.encodeproject.org/files/ENCFF221DPL/@@download/ENCFF221DPL.bam ENCFF053RTX https://www.encodeproject.org/files/ENCFF053RTX/@@download/ENCFF053RTX.bam 62.6 M 0 60.0 M 0.959 PE 100 100 native 26.2 M 0.0 M 23.8 M 0.761 0.91 0.91 10.79 140 3.90 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/e543152c-5f44-4aa7-9103-942b2d9fe3ec/@@download/cross_correlation_plot/ENCFF624PVAENCFF827MSA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB024XJW michael-snyder:L-3112 "ENCFF827MSA,ENCFF624PVA" HiSeq 4000 2016-10-27T22:20:55.942810+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bkg803697KPkyX9BPQF4F ENCSR055WBT https://www.encodeproject.org/experiments/ENCSR055WBT transcription factor POLR2A-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF863KQI https://www.encodeproject.org/files/ENCFF863KQI/@@download/ENCFF863KQI.bam ENCFF672KVJ https://www.encodeproject.org/files/ENCFF672KVJ/@@download/ENCFF672KVJ.bam 176.6 M 0 162.1 M 0.918 PE 100 100 native 69.9 M 0.0 M 60.0 M 0.680 0.87 0.87 7.32 220 2.02 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/cde7261f-998f-4c8d-acc7-b306654b78c7/@@download/cross_correlation_plot/ENCFF703TVCENCFF826QIL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB639ULY michael-snyder:L-1942 "ENCFF826QIL,ENCFF703TVC" HiSeq 4000 2016-11-02T23:28:33.694499+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbBJ003693PqK5QxbZZvy2 ENCSR517FVL https://www.encodeproject.org/experiments/ENCSR517FVL transcription factor POLR2A-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF888CAT https://www.encodeproject.org/files/ENCFF888CAT/@@download/ENCFF888CAT.bam ENCFF066CQX https://www.encodeproject.org/files/ENCFF066CQX/@@download/ENCFF066CQX.bam 137.0 M 0 127.5 M 0.931 PE 100 100 native 55.1 M 0.0 M 45.1 M 0.658 0.82 0.82 5.52 220 2.29 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/cfc7d773-90eb-4bde-bbc3-a542cd361807/@@download/cross_correlation_plot/ENCFF943DRVENCFF195OVM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB604SCG michael-snyder:L-1962 "ENCFF943DRV,ENCFF195OVM" HiSeq 4000 2016-11-02T23:17:46.359811+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbBy80369GGYp0V19j80X8 ENCSR610EFT https://www.encodeproject.org/experiments/ENCSR610EFT transcription factor POLR2A-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF098GAO https://www.encodeproject.org/files/ENCFF098GAO/@@download/ENCFF098GAO.bam ENCFF063JSL https://www.encodeproject.org/files/ENCFF063JSL/@@download/ENCFF063JSL.bam 69.2 M 0 67.3 M 0.973 PE 100 100 native 30.5 M 0.0 M 24.4 M 0.704 0.80 0.79 4.69 160 2.73 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/55636c82-cce8-478a-8b60-08728d3b9086/@@download/cross_correlation_plot/ENCFF176BWHENCFF019HPW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB573AJZ michael-snyder:L-3115 "ENCFF176BWH,ENCFF019HPW" HiSeq 4000 2016-10-27T22:20:32.002773+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bpxQ0369BX1xqb1B80vY1 ENCSR979DMN https://www.encodeproject.org/experiments/ENCSR979DMN transcription factor POLR2A-human body of pancreas tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF051OIH https://www.encodeproject.org/files/ENCFF051OIH/@@download/ENCFF051OIH.bam ENCFF473YUM https://www.encodeproject.org/files/ENCFF473YUM/@@download/ENCFF473YUM.bam 100.0 M 0 95.5 M 0.954 PE 100 100 native 41.0 M 0.0 M 37.4 M 0.749 0.91 0.91 11.76 190 1.25 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/167f0fbb-5c98-49fa-bc83-d6190e4a6db9/@@download/cross_correlation_plot/ENCFF506ONUENCFF113JGC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB114OOQ michael-snyder:L-3207 "ENCFF506ONU,ENCFF113JGC" HiSeq 4000 2016-12-10T04:07:32.069100+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QxZ8036904pZZ8v3bkY4Q ENCSR046PIC https://www.encodeproject.org/experiments/ENCSR046PIC control Control-human breast epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF402JYJ https://www.encodeproject.org/files/ENCFF402JYJ/@@download/ENCFF402JYJ.bam ENCFF636HFT https://www.encodeproject.org/files/ENCFF636HFT/@@download/ENCFF636HFT.bam 50.2 M 0 48.0 M 0.956 PE 100 None 20.7 M 0.0 M 19.6 M 0.779 0.95 0.95 18.09 210 1.08 4.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d94ffbf-073a-44ba-a802-4ef48f761c1a/@@download/cross_correlation_plot/ENCFF945YNKENCFF041FWW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB988ADH michael-snyder:L-2856 "ENCFF041FWW,ENCFF945YNK" HiSeq 2000 2016-05-06T18:17:37.870978+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq5680369BV4z7qQ2qyq9X ENCSR335XPG https://www.encodeproject.org/experiments/ENCSR335XPG control Control-human breast epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF656AUU https://www.encodeproject.org/files/ENCFF656AUU/@@download/ENCFF656AUU.bam ENCFF941UFO https://www.encodeproject.org/files/ENCFF941UFO/@@download/ENCFF941UFO.bam 117.4 M 0 110.7 M 0.943 PE 100 100 native 47.4 M 0.0 M 40.5 M 0.689 0.85 0.85 6.68 210 1.04 3.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ed13f65-89fa-4e46-bfee-7e2566ad61e5/@@download/cross_correlation_plot/ENCFF233LAOENCFF812XFE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB988ADH michael-snyder:L-2856 "ENCFF812XFE,ENCFF233LAO" HiSeq 4000 2016-09-01T21:38:14.237481+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VpV0036975Gxyv5y7xk0y ENCSR366VWM https://www.encodeproject.org/experiments/ENCSR366VWM control Control-human breast epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF136XMZ https://www.encodeproject.org/files/ENCFF136XMZ/@@download/ENCFF136XMZ.bam ENCFF692MYF https://www.encodeproject.org/files/ENCFF692MYF/@@download/ENCFF692MYF.bam 147.5 M 0 140.0 M 0.949 PE 100 None 58.3 M 0.0 M 52.8 M 0.716 0.91 0.90 10.44 190 1.03 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2bed79c-e1dd-409f-b094-65a3f1d1d2cf/@@download/cross_correlation_plot/ENCFF065VOBENCFF795HIW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB433BIP michael-snyder:L-2827 "ENCFF065VOB,ENCFF795HIW" HiSeq 4000 2016-05-06T18:22:47.281663+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqFqj03690j2jgp42pQ2v6 ENCSR535KIQ https://www.encodeproject.org/experiments/ENCSR535KIQ control Control-human breast epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF474ZRE https://www.encodeproject.org/files/ENCFF474ZRE/@@download/ENCFF474ZRE.bam ENCFF856KFW https://www.encodeproject.org/files/ENCFF856KFW/@@download/ENCFF856KFW.bam 58.7 M 0 55.4 M 0.944 PE 100 None 23.8 M 0.0 M 22.8 M 0.776 0.96 0.96 23.25 210 1.07 4.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c5b8352-ccf8-4659-aa39-ebfb49cdb410/@@download/cross_correlation_plot/ENCFF187PGUENCFF984CIZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB463KYK michael-snyder:L-2854 "ENCFF187PGU,ENCFF984CIZ" HiSeq 2000 2016-05-06T18:15:31.237730+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKv8036961GyjjQ2QP8V1 ENCSR794WXG https://www.encodeproject.org/experiments/ENCSR794WXG control Control-human breast epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF842GBA https://www.encodeproject.org/files/ENCFF842GBA/@@download/ENCFF842GBA.bam ENCFF227XRC https://www.encodeproject.org/files/ENCFF227XRC/@@download/ENCFF227XRC.bam 124.8 M 0 117.8 M 0.944 PE 100 None 49.1 M 0.0 M 43.4 M 0.696 0.89 0.88 8.58 215 1.04 3.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/2099c65c-10e4-4e22-acc1-474227b6ffc0/@@download/cross_correlation_plot/ENCFF052ROOENCFF118YSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB135QCV michael-snyder:L-2830 "ENCFF118YSX,ENCFF052ROO" HiSeq 4000 2016-05-06T18:13:36.192959+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqb6Q036986q4kkQ2Q0KpK ENCSR986YXU https://www.encodeproject.org/experiments/ENCSR986YXU control Control-human breast epithelium tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF189PXK https://www.encodeproject.org/files/ENCFF189PXK/@@download/ENCFF189PXK.bam ENCFF209ONX https://www.encodeproject.org/files/ENCFF209ONX/@@download/ENCFF209ONX.bam 89.7 M 0 87.2 M 0.972 PE 100 100 native 37.2 M 0.0 M 29.3 M 0.653 0.79 0.79 4.59 175 1.06 7.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/906228c5-98c3-42e4-b496-010f8fbf2ed9/@@download/cross_correlation_plot/ENCFF768QDHENCFF408QFY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB269ZTI michael-snyder:L-3284 "ENCFF408QFY,ENCFF768QDH" HiSeq 4000 2017-02-07T19:23:53.241862+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GFgFQ03698Y174Fz56kGgG ENCSR304XUZ https://www.encodeproject.org/experiments/ENCSR304XUZ "transcription factor,RNA binding protein" CTCF-human breast epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF516KHW https://www.encodeproject.org/files/ENCFF516KHW/@@download/ENCFF516KHW.bam ENCFF044SHT https://www.encodeproject.org/files/ENCFF044SHT/@@download/ENCFF044SHT.bam 111.7 M 0 74.6 M 0.668 PE 100 100 native 31.2 M 0.0 M 22.2 M 0.398 0.71 0.71 3.37 215 1.09 3.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/cae03f54-6a66-487f-99bf-7257767d6c60/@@download/cross_correlation_plot/ENCFF271MICENCFF604MZQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB600CNQ michael-snyder:L-2825 "ENCFF604MZQ,ENCFF271MIC" HiSeq 4000 2016-09-01T21:37:24.167039+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vp9j03693J600yky6f60B ENCSR661NXJ https://www.encodeproject.org/experiments/ENCSR661NXJ "transcription factor,RNA binding protein" CTCF-human breast epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF339EOA https://www.encodeproject.org/files/ENCFF339EOA/@@download/ENCFF339EOA.bam ENCFF004SUO https://www.encodeproject.org/files/ENCFF004SUO/@@download/ENCFF004SUO.bam 113.5 M 0 78.4 M 0.691 PE 100 100 native 32.6 M 0.0 M 24.5 M 0.432 0.75 0.75 3.88 230 1.32 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/41bf6c1f-4c5b-46eb-bebc-8b239d837660/@@download/cross_correlation_plot/ENCFF643ITKENCFF324OEI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB847GOC michael-snyder:L-2828 "ENCFF324OEI,ENCFF643ITK" HiSeq 4000 2016-09-01T21:39:33.109032+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vjp8036901KGJxJy94V0F ENCSR697YIN https://www.encodeproject.org/experiments/ENCSR697YIN "transcription factor,RNA binding protein" CTCF-human breast epithelium tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF529KBB https://www.encodeproject.org/files/ENCFF529KBB/@@download/ENCFF529KBB.bam ENCFF885KNH https://www.encodeproject.org/files/ENCFF885KNH/@@download/ENCFF885KNH.bam 97.4 M 0 89.6 M 0.921 PE 100 100 native 38.6 M 0.0 M 22.5 M 0.463 0.58 0.57 2.20 185 1.28 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/68e47f9b-ba10-4867-9483-f48db10b6623/@@download/cross_correlation_plot/ENCFF221NRWENCFF916HDR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB907JEM michael-snyder:L-3280 "ENCFF916HDR,ENCFF221NRW" HiSeq 4000 2017-02-04T22:08:00.210906+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVybQ03694vx9yFzjV3934 ENCSR299CAV https://www.encodeproject.org/experiments/ENCSR299CAV transcription factor POLR2A-human breast epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF728KUF https://www.encodeproject.org/files/ENCFF728KUF/@@download/ENCFF728KUF.bam ENCFF872KVI https://www.encodeproject.org/files/ENCFF872KVI/@@download/ENCFF872KVI.bam 117.5 M 0 78.3 M 0.666 PE 100 100 native 32.5 M 0.0 M 22.8 M 0.387 0.70 0.69 3.20 225 1.08 3.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/6a8a34aa-bf02-4b8f-9cbc-06645d036927/@@download/cross_correlation_plot/ENCFF177KGHENCFF225AAI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB899SMJ michael-snyder:L-2826 "ENCFF177KGH,ENCFF225AAI" HiSeq 4000 2016-09-01T21:38:51.071234+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vp78036901KGJxJy94V3b ENCSR304IVU https://www.encodeproject.org/experiments/ENCSR304IVU transcription factor POLR2A-human breast epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF136USC https://www.encodeproject.org/files/ENCFF136USC/@@download/ENCFF136USC.bam ENCFF378CDM https://www.encodeproject.org/files/ENCFF378CDM/@@download/ENCFF378CDM.bam 98.0 M 0 57.8 M 0.590 PE 100 100 native 23.8 M 0.0 M 13.4 M 0.274 0.56 0.56 2.23 235 1.26 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/b8430523-040a-4444-9c09-44ebbe3cad33/@@download/cross_correlation_plot/ENCFF074WTDENCFF784DME.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB596FXQ michael-snyder:L-2829 "ENCFF784DME,ENCFF074WTD" HiSeq 4000 2016-09-01T21:36:23.668648+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VkXj036901KGJxJy94V1x ENCSR585FQO https://www.encodeproject.org/experiments/ENCSR585FQO control Control-human C4-2B immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF980IJT https://www.encodeproject.org/files/ENCFF980IJT/@@download/ENCFF980IJT.bam ENCFF175XXJ https://www.encodeproject.org/files/ENCFF175XXJ/@@download/ENCFF175XXJ.bam 68.5 M 0 63.4 M 0.925 PE 100 100 native 19.0 M 0.0 M 18.7 M 0.545 0.98 0.98 50.98 285 1.13 3.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/8769cb50-66a7-4c10-8147-359fdfab4383/@@download/cross_correlation_plot/ENCFF007ATPENCFF056XEJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB838PTL michael-snyder:L-2687 "ENCFF056XEJ,ENCFF007ATP" HiSeq 2000 2017-02-02T19:36:29.877029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293GV00369Pp2VxJjzyvy26 ENCSR585FQO https://www.encodeproject.org/experiments/ENCSR585FQO control Control-human C4-2B immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF244UGL https://www.encodeproject.org/files/ENCFF244UGL/@@download/ENCFF244UGL.bam ENCFF090ARS https://www.encodeproject.org/files/ENCFF090ARS/@@download/ENCFF090ARS.bam 60.8 M 0 59.2 M 0.975 PE 100 100 native 24.5 M 0.0 M 24.2 M 0.795 0.99 0.99 70.07 295 1.04 5.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/156ac441-2566-4992-9315-dd5c69961769/@@download/cross_correlation_plot/ENCFF928OBEENCFF619MWU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB695NWD michael-snyder:L-2713 "ENCFF619MWU,ENCFF928OBE" HiSeq 2000 2017-02-02T19:24:54.272479+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293J3003693jxfkJ697fv88 ENCSR460LGH https://www.encodeproject.org/experiments/ENCSR460LGH "transcription factor,RNA binding protein" CTCF-human C4-2B immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF852QTC https://www.encodeproject.org/files/ENCFF852QTC/@@download/ENCFF852QTC.bam ENCFF491ZOM https://www.encodeproject.org/files/ENCFF491ZOM/@@download/ENCFF491ZOM.bam 95.6 M 0 93.8 M 0.982 PE 100 100 native 40.7 M 0.0 M 36.6 M 0.766 0.90 0.90 9.64 415 1.97 3.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/96d756e5-6f02-4451-8c2b-6cee4af923d8/@@download/cross_correlation_plot/ENCFF643KQW-ENCFF976CAW_pooledENCFF224VKL-ENCFF130AIS_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB941BJR michael-snyder:L-3080 "ENCFF976CAW,ENCFF643KQW,ENCFF224VKL,ENCFF130AIS" HiSeq 2000 2017-07-20T04:21:45.074545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpJ20036931QGBPb2VFyf7 ENCSR460LGH https://www.encodeproject.org/experiments/ENCSR460LGH "transcription factor,RNA binding protein" CTCF-human C4-2B immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF936NPT https://www.encodeproject.org/files/ENCFF936NPT/@@download/ENCFF936NPT.bam ENCFF475DLA https://www.encodeproject.org/files/ENCFF475DLA/@@download/ENCFF475DLA.bam 102.0 M 0 100.3 M 0.983 PE 100 100 native 43.5 M 0.0 M 41.3 M 0.810 0.95 0.95 19.71 320 1.52 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0854726-b5ea-4e00-ae74-25b7bdb637ff/@@download/cross_correlation_plot/ENCFF813EGO-ENCFF071LWT_pooledENCFF232YUA-ENCFF882VBQ_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB281KTN michael-snyder:L-3081 "ENCFF071LWT,ENCFF813EGO,ENCFF232YUA,ENCFF882VBQ" HiSeq 2000 2017-07-20T05:12:35.267281+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpJ5Q0369BPQKJJ3kyg706 ENCSR279KIX https://www.encodeproject.org/experiments/ENCSR279KIX "histone,histone modification,narrow histone mark" H3K27ac-human C4-2B immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF913EZV https://www.encodeproject.org/files/ENCFF913EZV/@@download/ENCFF913EZV.bam ENCFF856EMM https://www.encodeproject.org/files/ENCFF856EMM/@@download/ENCFF856EMM.bam 55.7 M 0 54.5 M 0.977 PE 100 100 native 22.5 M 0.0 M 21.6 M 0.774 0.96 0.96 23.23 330 1.90 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/063f79c0-78b7-43be-a6b0-e68720f91324/@@download/cross_correlation_plot/ENCFF226MBWENCFF098LPP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB205HAN michael-snyder:L-3086 "ENCFF226MBW,ENCFF098LPP" HiSeq 2000 2017-03-04T00:35:26.565785+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv0Jj0369J6F6g3jKJfq3v ENCSR279KIX https://www.encodeproject.org/experiments/ENCSR279KIX "histone,histone modification,narrow histone mark" H3K27ac-human C4-2B immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF705ZOY https://www.encodeproject.org/files/ENCFF705ZOY/@@download/ENCFF705ZOY.bam ENCFF850MZN https://www.encodeproject.org/files/ENCFF850MZN/@@download/ENCFF850MZN.bam 91.9 M 0 89.5 M 0.974 PE 100 100 native 37.6 M 0.0 M 36.8 M 0.802 0.98 0.98 46.61 295 1.32 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/348a6e82-fc95-470f-8ef6-2a8a65796fb8/@@download/cross_correlation_plot/ENCFF306IVPENCFF962GKC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB151CZX michael-snyder:L-3087 "ENCFF306IVP,ENCFF962GKC" HiSeq 2000 2017-03-04T03:45:59.740610+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv0jQ03691jGpk3j84pKYg ENCSR027UFT https://www.encodeproject.org/experiments/ENCSR027UFT transcription factor ZFX-human C4-2B immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF316VFC https://www.encodeproject.org/files/ENCFF316VFC/@@download/ENCFF316VFC.bam ENCFF395QIX https://www.encodeproject.org/files/ENCFF395QIX/@@download/ENCFF395QIX.bam 106.1 M 0 103.8 M 0.978 PE 100 100 native 43.9 M 0.0 M 42.2 M 0.795 0.96 0.96 24.71 260 1.05 2.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/bde3d19d-705e-428c-b7a5-9ef1a8307b3f/@@download/cross_correlation_plot/ENCFF668JXEENCFF059FPN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB154SDC michael-snyder:L-2684 "ENCFF059FPN,ENCFF668JXE" HiSeq 2000 2017-02-02T19:37:42.402398+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293Fg803696V163FPx4zB9G ENCSR027UFT https://www.encodeproject.org/experiments/ENCSR027UFT transcription factor ZFX-human C4-2B immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF381IZD https://www.encodeproject.org/files/ENCFF381IZD/@@download/ENCFF381IZD.bam ENCFF237TDN https://www.encodeproject.org/files/ENCFF237TDN/@@download/ENCFF237TDN.bam 121.1 M 0 118.4 M 0.978 PE 100 100 native 49.9 M 0.0 M 46.7 M 0.772 0.94 0.94 15.49 285 1.14 2.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4faa9c0-212d-4f94-a685-742f6a096080/@@download/cross_correlation_plot/ENCFF026OWVENCFF454AFY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB876TKQ michael-snyder:L-3084 "ENCFF026OWV,ENCFF454AFY" HiSeq 2000 2017-02-02T19:38:46.649400+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293Fpj036988x5jFzyv4KB8 ENCSR915YUA https://www.encodeproject.org/experiments/ENCSR915YUA control Control-human coronary artery tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF628SZJ https://www.encodeproject.org/files/ENCFF628SZJ/@@download/ENCFF628SZJ.bam ENCFF825VWI https://www.encodeproject.org/files/ENCFF825VWI/@@download/ENCFF825VWI.bam 92.9 M 0 91.0 M 0.979 PE 100 100 native 40.5 M 0.0 M 32.7 M 0.703 0.81 0.81 5.06 165 1.07 7.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b325e62-f84b-4cea-8736-84d0d2b71c28/@@download/cross_correlation_plot/ENCFF957EOYENCFF893JHQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB375AJW michael-snyder:L-3219 "ENCFF957EOY,ENCFF893JHQ" HiSeq 4000 2017-01-27T06:30:24.748668+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253XZj036904kff5bQ8y30z ENCSR175FLL https://www.encodeproject.org/experiments/ENCSR175FLL "transcription factor,RNA binding protein" CTCF-human coronary artery tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF646WTU https://www.encodeproject.org/files/ENCFF646WTU/@@download/ENCFF646WTU.bam ENCFF300ZPP https://www.encodeproject.org/files/ENCFF300ZPP/@@download/ENCFF300ZPP.bam 82.6 M 0 80.1 M 0.969 PE 100 100 native 35.9 M 0.0 M 18.6 M 0.450 0.52 0.49 1.83 175 1.64 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/748fc892-4fca-4fdd-b119-0e0988fd9261/@@download/cross_correlation_plot/ENCFF024HXPENCFF480IZA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB519ZAH michael-snyder:L-3218 "ENCFF024HXP,ENCFF480IZA" HiSeq 4000 2017-01-27T06:28:45.725358+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Xkj036958ZB25bBz7zQJ ENCSR000EFA https://www.encodeproject.org/experiments/ENCSR000EFA transcription factor JUN-human endothelial cell of umbilical vein primary cell michael-snyder ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000EEZ https://www.encodeproject.org/experiments/ENCSR000EEZ transcription factor MAX-human endothelial cell of umbilical vein primary cell michael-snyder ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000EFB https://www.encodeproject.org/experiments/ENCSR000EFB transcription factor POLR2A-human endothelial cell of umbilical vein primary cell michael-snyder ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR131SEB https://www.encodeproject.org/experiments/ENCSR131SEB control Control-human epithelial cell of prostate primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF711IHQ https://www.encodeproject.org/files/ENCFF711IHQ/@@download/ENCFF711IHQ.bam ENCFF017RHY https://www.encodeproject.org/files/ENCFF017RHY/@@download/ENCFF017RHY.bam 79.2 M 0 77.8 M 0.983 PE 100 100 native 33.8 M 0.0 M 33.0 M 0.833 0.98 0.98 40.60 340 1.02 2.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/436ec385-d87d-4cd3-9a18-1c3b86cc76ce/@@download/cross_correlation_plot/ENCFF837GYPENCFF888ISZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB881YCH michael-snyder:L-2778 "ENCFF837GYP,ENCFF888ISZ" HiSeq 2000 2016-12-15T19:50:26.549082+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y6j80369KFQ14F3P0YyFg ENCSR131SEB https://www.encodeproject.org/experiments/ENCSR131SEB control Control-human epithelial cell of prostate primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF213AZI https://www.encodeproject.org/files/ENCFF213AZI/@@download/ENCFF213AZI.bam ENCFF942SDK https://www.encodeproject.org/files/ENCFF942SDK/@@download/ENCFF942SDK.bam 79.2 M 0 77.9 M 0.984 PE 100 100 native 34.0 M 0.0 M 33.3 M 0.842 0.98 0.98 53.89 285 1.02 4.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/58714176-830f-4eec-bbb5-4a5c8e8dc993/@@download/cross_correlation_plot/ENCFF842AATENCFF541WRS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB056QHH michael-snyder:L-2779 "ENCFF842AAT,ENCFF541WRS" HiSeq 2000 2016-12-15T19:49:58.025667+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y7F003691Gf0q79x2xqyq ENCSR196HOM https://www.encodeproject.org/experiments/ENCSR196HOM "transcription factor,RNA binding protein" CTCF-human epithelial cell of prostate primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF951XSM https://www.encodeproject.org/files/ENCFF951XSM/@@download/ENCFF951XSM.bam ENCFF082TAD https://www.encodeproject.org/files/ENCFF082TAD/@@download/ENCFF082TAD.bam 80.1 M 0 77.6 M 0.969 PE 100 100 native 32.5 M 0.0 M 21.2 M 0.530 0.65 0.65 2.80 295 2.17 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/869f24bc-ac59-4837-9a55-b8c661c59955/@@download/cross_correlation_plot/ENCFF525FCDENCFF862ENY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB046TKT michael-snyder:L-2768 "ENCFF525FCD,ENCFF862ENY" HiSeq 2000 2016-12-15T19:54:01.418738+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y6X003691Gf0q79x2xqx9 ENCSR196HOM https://www.encodeproject.org/experiments/ENCSR196HOM "transcription factor,RNA binding protein" CTCF-human epithelial cell of prostate primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF608KCO https://www.encodeproject.org/files/ENCFF608KCO/@@download/ENCFF608KCO.bam ENCFF084LIT https://www.encodeproject.org/files/ENCFF084LIT/@@download/ENCFF084LIT.bam 126.6 M 0 122.8 M 0.970 PE 100 100 native 52.3 M 0.0 M 29.9 M 0.472 0.57 0.55 2.15 270 1.95 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/1370dc5f-994b-4488-adc5-a130052da233/@@download/cross_correlation_plot/ENCFF212WVZENCFF322UDQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB116DCU michael-snyder:L-2769 "ENCFF322UDQ,ENCFF212WVZ" HiSeq 2000 2016-12-15T19:54:58.761174+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y7K80369F2xJYJ4yKpP84 ENCSR910PDW https://www.encodeproject.org/experiments/ENCSR910PDW "histone,histone modification,narrow histone mark" H3K27ac-human epithelial cell of prostate primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF175ANQ https://www.encodeproject.org/files/ENCFF175ANQ/@@download/ENCFF175ANQ.bam ENCFF135UGN https://www.encodeproject.org/files/ENCFF135UGN/@@download/ENCFF135UGN.bam 110.2 M 0 109.2 M 0.991 PE 100 100 native 50.5 M 0.0 M 42.7 M 0.776 0.85 0.84 6.16 305 1.73 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ce6785c-b328-4b45-9fa2-7c3bf1d96dd7/@@download/cross_correlation_plot/ENCFF851FQKENCFF317KRC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB588PFU michael-snyder:L-2773 "ENCFF851FQK,ENCFF317KRC" HiSeq 2000 2017-03-02T03:06:33.562874+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pv5J80369PKpFGF3GyQ5g1 ENCSR910PDW https://www.encodeproject.org/experiments/ENCSR910PDW "histone,histone modification,narrow histone mark" H3K27ac-human epithelial cell of prostate primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF382XYO https://www.encodeproject.org/files/ENCFF382XYO/@@download/ENCFF382XYO.bam ENCFF551OYH https://www.encodeproject.org/files/ENCFF551OYH/@@download/ENCFF551OYH.bam 82.2 M 0 81.4 M 0.989 PE 100 100 native 37.0 M 0.0 M 34.5 M 0.839 0.93 0.93 14.63 345 1.47 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5b9b543-dcda-4687-b063-4150f87900f5/@@download/cross_correlation_plot/ENCFF036JGOENCFF052SOO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB910GSC michael-snyder:L-2774 "ENCFF036JGO,ENCFF052SOO" HiSeq 2000 2017-03-01T06:33:49.644769+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pv60Q0369BqYK0F4KgbzGx ENCSR522KYV https://www.encodeproject.org/experiments/ENCSR522KYV control Control-human esophagus muscularis mucosa tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF596ZPN https://www.encodeproject.org/files/ENCFF596ZPN/@@download/ENCFF596ZPN.bam ENCFF654JJY https://www.encodeproject.org/files/ENCFF654JJY/@@download/ENCFF654JJY.bam 121.9 M 0 119.1 M 0.977 PE 100 100 native 52.2 M 0.0 M 40.3 M 0.661 0.77 0.77 4.18 170 1.05 4.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/d06818ac-77d2-482a-92bc-1ca297a619e6/@@download/cross_correlation_plot/ENCFF098IHCENCFF005SGJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB865EZR michael-snyder:L-3187 "ENCFF098IHC,ENCFF005SGJ" HiSeq 4000 2016-12-10T05:38:29.902836+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QjYj0369PJ8BP63qf17z4 ENCSR834ESZ https://www.encodeproject.org/experiments/ENCSR834ESZ control Control-human esophagus muscularis mucosa tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF015PXS https://www.encodeproject.org/files/ENCFF015PXS/@@download/ENCFF015PXS.bam ENCFF982MHW https://www.encodeproject.org/files/ENCFF982MHW/@@download/ENCFF982MHW.bam 113.7 M 0 110.1 M 0.968 PE 100 100 native 47.9 M 0.0 M 40.7 M 0.716 0.85 0.86 7.69 175 1.05 6.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/03e8d996-180b-4504-88c7-e7a9748db072/@@download/cross_correlation_plot/ENCFF011TZGENCFF539NMO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB610GCX michael-snyder:L-3344 "ENCFF011TZG,ENCFF539NMO" HiSeq 4000 2017-03-17T16:48:41.037446+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X3Gj03692Q4k4J13g2XJv ENCSR074SFL https://www.encodeproject.org/experiments/ENCSR074SFL "transcription factor,RNA binding protein" CTCF-human esophagus muscularis mucosa tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF080IVM https://www.encodeproject.org/files/ENCFF080IVM/@@download/ENCFF080IVM.bam ENCFF416LHH https://www.encodeproject.org/files/ENCFF416LHH/@@download/ENCFF416LHH.bam 64.5 M 0 60.9 M 0.943 PE 100 100 native 26.8 M 0.0 M 18.4 M 0.570 0.69 0.67 2.90 175 1.27 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/ac29b918-4a34-48ac-a922-ac19d6e6a9b4/@@download/cross_correlation_plot/ENCFF800IPMENCFF621DYS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB185XMK michael-snyder:L-3175 "ENCFF800IPM,ENCFF621DYS" HiSeq 4000 2017-03-17T16:48:23.206239+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35Vzfj0369K4p4274g6jZ08 ENCSR353DFU https://www.encodeproject.org/experiments/ENCSR353DFU "transcription factor,RNA binding protein" CTCF-human esophagus muscularis mucosa tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF827XZB https://www.encodeproject.org/files/ENCFF827XZB/@@download/ENCFF827XZB.bam ENCFF030MFB https://www.encodeproject.org/files/ENCFF030MFB/@@download/ENCFF030MFB.bam 103.7 M 0 97.4 M 0.939 PE 100 100 native 42.9 M 0.0 M 25.7 M 0.495 0.60 0.57 2.17 185 1.47 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/52909d92-e362-4506-a817-9d7d591a04e8/@@download/cross_correlation_plot/ENCFF099PGD-ENCFF724RNY_pooledENCFF404VFO-ENCFF922ULN_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB277UTE michael-snyder:L-3176 "ENCFF922ULN,ENCFF404VFO,ENCFF099PGD,ENCFF724RNY" HiSeq 4000 2017-03-21T07:28:10.914050+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3813qQ03693K3xkB5YQQzp7 ENCSR559KAB https://www.encodeproject.org/experiments/ENCSR559KAB "transcription factor,RNA binding protein" CTCF-human esophagus muscularis mucosa tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF703WUV https://www.encodeproject.org/files/ENCFF703WUV/@@download/ENCFF703WUV.bam ENCFF397TXF https://www.encodeproject.org/files/ENCFF397TXF/@@download/ENCFF397TXF.bam 68.8 M 0 64.0 M 0.931 PE 100 100 native 28.2 M 0.0 M 19.5 M 0.566 0.69 0.68 2.98 195 1.53 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e3d383e-a016-4456-bb92-90a8809a395e/@@download/cross_correlation_plot/ENCFF761XFHENCFF037XQS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB511PRO michael-snyder:L-3183 "ENCFF761XFH,ENCFF037XQS" HiSeq 4000 2016-12-10T03:16:18.772541+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15XZ980369F4yf5544b155P ENCSR922GUA https://www.encodeproject.org/experiments/ENCSR922GUA transcription factor POLR2A-human esophagus muscularis mucosa tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF165JXX https://www.encodeproject.org/files/ENCFF165JXX/@@download/ENCFF165JXX.bam ENCFF645UNK https://www.encodeproject.org/files/ENCFF645UNK/@@download/ENCFF645UNK.bam 75.8 M 0 72.3 M 0.954 PE 100 100 native 31.6 M 0.0 M 19.8 M 0.522 0.63 0.61 2.39 185 1.12 4.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd9fc1d8-a94e-4a7e-b6c5-f1c11aaab9e8/@@download/cross_correlation_plot/ENCFF438UORENCFF478FFG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB166EIB michael-snyder:L-3343 "ENCFF438UOR,ENCFF478FFG" HiSeq 4000 2017-03-13T17:26:01.832362+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30qq8003699Jfj61zZjY103 ENCSR153OQA https://www.encodeproject.org/experiments/ENCSR153OQA control Control-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF295YCD https://www.encodeproject.org/files/ENCFF295YCD/@@download/ENCFF295YCD.bam ENCFF747SQK https://www.encodeproject.org/files/ENCFF747SQK/@@download/ENCFF747SQK.bam 102.4 M 0 100.3 M 0.979 PE 100 100 native 43.9 M 0.0 M 33.6 M 0.657 0.77 0.76 4.05 165 1.05 3.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba6d23b3-03ad-40ce-b182-2e25ee6b543d/@@download/cross_correlation_plot/ENCFF673LIBENCFF488PCP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB321BLN michael-snyder:L-3186 "ENCFF673LIB,ENCFF488PCP" HiSeq 4000 2016-12-10T05:12:07.493085+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15V08Q0369445BJJ915X5gg ENCSR253FAH https://www.encodeproject.org/experiments/ENCSR253FAH control Control-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF879BET https://www.encodeproject.org/files/ENCFF879BET/@@download/ENCFF879BET.bam ENCFF265XQG https://www.encodeproject.org/files/ENCFF265XQG/@@download/ENCFF265XQG.bam 96.4 M 0 85.1 M 0.883 PE 100 100 native 36.9 M 0.0 M 34.1 M 0.708 0.93 0.92 13.23 210 1.05 5.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb3d2693-9f53-4279-85b9-7ee9742d6211/@@download/cross_correlation_plot/ENCFF190AMKENCFF164UIN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB510TZE michael-snyder:L-3296 "ENCFF164UIN,ENCFF190AMK" HiSeq 4000 2017-03-17T16:50:48.172941+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X1JQ03692642094FB96fx ENCSR311TCB https://www.encodeproject.org/experiments/ENCSR311TCB control Control-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF302FDA https://www.encodeproject.org/files/ENCFF302FDA/@@download/ENCFF302FDA.bam ENCFF689DJZ https://www.encodeproject.org/files/ENCFF689DJZ/@@download/ENCFF689DJZ.bam 101.6 M 0 98.3 M 0.967 PE 100 100 native 43.1 M 0.0 M 32.0 M 0.630 0.74 0.74 3.78 160 1.06 6.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4064b07-02f1-44e1-b4ec-9d2ba63762aa/@@download/cross_correlation_plot/ENCFF186FILENCFF176XPN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB252HMC michael-snyder:L-3179 "ENCFF186FIL,ENCFF176XPN" HiSeq 4000 2016-12-10T04:25:56.258084+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qvf80369GZq2777778XJ1 ENCSR581RPO https://www.encodeproject.org/experiments/ENCSR581RPO control Control-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF764CLL https://www.encodeproject.org/files/ENCFF764CLL/@@download/ENCFF764CLL.bam ENCFF071ZDQ https://www.encodeproject.org/files/ENCFF071ZDQ/@@download/ENCFF071ZDQ.bam 98.0 M 0 89.4 M 0.912 PE 100 100 native 38.6 M 0.0 M 33.5 M 0.684 0.87 0.87 7.39 180 1.05 5.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/84e0d0f7-a863-4deb-9931-eaed115b66f7/@@download/cross_correlation_plot/ENCFF573DUGENCFF896ECQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB236VGX michael-snyder:L-3297 "ENCFF573DUG,ENCFF896ECQ" HiSeq 4000 2017-03-17T16:50:38.151866+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X2380369K4p4274g6jZ0V ENCSR710DTC https://www.encodeproject.org/experiments/ENCSR710DTC control Control-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF572VZL https://www.encodeproject.org/files/ENCFF572VZL/@@download/ENCFF572VZL.bam ENCFF072UMU https://www.encodeproject.org/files/ENCFF072UMU/@@download/ENCFF072UMU.bam 92.6 M 0 89.7 M 0.969 PE 100 100 native 39.0 M 0.0 M 29.4 M 0.635 0.75 0.75 3.97 175 1.06 6.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1c7f659-f452-4d22-a5db-72014a39a4fe/@@download/cross_correlation_plot/ENCFF398FSPENCFF993FKF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB341IGG michael-snyder:L-3180 "ENCFF993FKF,ENCFF398FSP" HiSeq 4000 2016-12-10T03:41:41.895899+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QxvQ0369BV55708G9qV3F ENCSR746FMO https://www.encodeproject.org/experiments/ENCSR746FMO control Control-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF983NYA https://www.encodeproject.org/files/ENCFF983NYA/@@download/ENCFF983NYA.bam ENCFF878PDO https://www.encodeproject.org/files/ENCFF878PDO/@@download/ENCFF878PDO.bam 117.1 M 0 90.2 M 0.770 PE 100 100 native 38.7 M 0.0 M 34.9 M 0.596 0.90 0.90 10.11 195 1.06 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd938782-82a3-4f87-bda8-29dafa4dcf09/@@download/cross_correlation_plot/ENCFF814ZUTENCFF518CYQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB560HMJ michael-snyder:L-3334 "ENCFF814ZUT,ENCFF518CYQ" HiSeq 4000 2017-03-23T18:12:10.666404+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QF8j0369GvF4x8QFfJKB8 ENCSR783XDX https://www.encodeproject.org/experiments/ENCSR783XDX control Control-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF640XYK https://www.encodeproject.org/files/ENCFF640XYK/@@download/ENCFF640XYK.bam ENCFF435MDR https://www.encodeproject.org/files/ENCFF435MDR/@@download/ENCFF435MDR.bam 93.5 M 0 91.5 M 0.979 PE 100 100 native 39.9 M 0.0 M 29.6 M 0.634 0.74 0.74 3.65 170 1.05 5.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/20bc555a-7913-4442-b310-7d8de5f06aec/@@download/cross_correlation_plot/ENCFF564CEOENCFF496PKK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB152UUP michael-snyder:L-3185 "ENCFF496PKK,ENCFF564CEO" HiSeq 4000 2016-12-10T03:42:11.014708+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qk8j0369PvYp91zK1Pk75 ENCSR003SZZ https://www.encodeproject.org/experiments/ENCSR003SZZ "transcription factor,RNA binding protein" CTCF-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF335MCG https://www.encodeproject.org/files/ENCFF335MCG/@@download/ENCFF335MCG.bam ENCFF432KGO https://www.encodeproject.org/files/ENCFF432KGO/@@download/ENCFF432KGO.bam 106.4 M 0 102.9 M 0.968 PE 100 100 native 44.8 M 0.0 M 33.1 M 0.622 0.74 0.73 3.70 180 1.21 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d79d3d4-5beb-49e8-9406-f7f051c4f1de/@@download/cross_correlation_plot/ENCFF753KXCENCFF775HOD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB098MSN michael-snyder:L-3174 "ENCFF753KXC,ENCFF775HOD" HiSeq 4000 2016-12-10T04:27:23.861191+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QqbQ03693J2XX63yZ76qg ENCSR450FRI https://www.encodeproject.org/experiments/ENCSR450FRI "transcription factor,RNA binding protein" CTCF-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF379OME https://www.encodeproject.org/files/ENCFF379OME/@@download/ENCFF379OME.bam ENCFF437ECF https://www.encodeproject.org/files/ENCFF437ECF/@@download/ENCFF437ECF.bam 109.4 M 0 105.0 M 0.959 PE 100 100 native 46.5 M 0.0 M 37.1 M 0.678 0.80 0.79 4.78 170 2.10 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/46b43b86-aff1-4e57-8b2a-b00da2aa39b6/@@download/cross_correlation_plot/ENCFF365JJXENCFF621MLU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB304RDP michael-snyder:L-3182 "ENCFF621MLU,ENCFF365JJX" HiSeq 4000 2016-12-10T04:33:38.348266+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qy280369F4yf5544b14J4 ENCSR773JBP https://www.encodeproject.org/experiments/ENCSR773JBP "transcription factor,RNA binding protein" CTCF-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF300VIN https://www.encodeproject.org/files/ENCFF300VIN/@@download/ENCFF300VIN.bam ENCFF510UXR https://www.encodeproject.org/files/ENCFF510UXR/@@download/ENCFF510UXR.bam 107.6 M 0 103.5 M 0.962 PE 100 100 native 45.5 M 0.0 M 29.1 M 0.541 0.64 0.63 2.63 170 1.35 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ffafb7f-6bd0-442a-bfe6-3ba5bea17b71/@@download/cross_correlation_plot/ENCFF296OXRENCFF565IZM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB972TWN michael-snyder:L-3173 "ENCFF296OXR,ENCFF565IZM" HiSeq 4000 2016-12-10T04:17:36.922881+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qv5803695v47P6433J993 ENCSR838RUX https://www.encodeproject.org/experiments/ENCSR838RUX "transcription factor,RNA binding protein" CTCF-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF415FHO https://www.encodeproject.org/files/ENCFF415FHO/@@download/ENCFF415FHO.bam ENCFF165MQP https://www.encodeproject.org/files/ENCFF165MQP/@@download/ENCFF165MQP.bam 92.5 M 0 89.7 M 0.970 PE 100 100 native 39.8 M 0.0 M 26.3 M 0.568 0.66 0.65 2.66 190 1.51 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/7544cdd8-9550-49e4-9bc1-2803098b48fe/@@download/cross_correlation_plot/ENCFF248TRLENCFF543ODV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB372GNE michael-snyder:L-3181 "ENCFF543ODV,ENCFF248TRL" HiSeq 4000 2016-12-10T04:41:27.002763+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qz880369PJ8BP63qf1825 ENCSR147PYL https://www.encodeproject.org/experiments/ENCSR147PYL transcription factor POLR2A-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF572HPL https://www.encodeproject.org/files/ENCFF572HPL/@@download/ENCFF572HPL.bam ENCFF825NIT https://www.encodeproject.org/files/ENCFF825NIT/@@download/ENCFF825NIT.bam 100.3 M 0 84.5 M 0.843 PE 100 100 native 37.4 M 0.0 M 29.5 M 0.588 0.79 0.79 4.60 175 1.50 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/426ce7a2-0b13-4f6c-bcc0-c55eb424ad82/@@download/cross_correlation_plot/ENCFF356QEUENCFF759FBS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB463IEN michael-snyder:L-3330 "ENCFF356QEU,ENCFF759FBS" HiSeq 4000 2017-03-21T07:26:10.935643+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3815Jj03694jXv07YJB6X7f ENCSR156UQO https://www.encodeproject.org/experiments/ENCSR156UQO transcription factor POLR2A-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF528OBT https://www.encodeproject.org/files/ENCFF528OBT/@@download/ENCFF528OBT.bam ENCFF272QHW https://www.encodeproject.org/files/ENCFF272QHW/@@download/ENCFF272QHW.bam 91.3 M 0 82.2 M 0.900 PE 100 100 native 35.9 M 0.0 M 21.3 M 0.466 0.59 0.58 2.32 200 1.20 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/72aabb7f-f26f-4600-afb9-0faa42ba0b47/@@download/cross_correlation_plot/ENCFF547OPOENCFF996YRU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB813TAN michael-snyder:L-3290 "ENCFF996YRU,ENCFF547OPO" HiSeq 4000 2017-03-17T16:49:30.686486+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X17Q03698V6531qgb8QFp ENCSR734ZOZ https://www.encodeproject.org/experiments/ENCSR734ZOZ transcription factor POLR2A-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF480MSL https://www.encodeproject.org/files/ENCFF480MSL/@@download/ENCFF480MSL.bam ENCFF176XZK https://www.encodeproject.org/files/ENCFF176XZK/@@download/ENCFF176XZK.bam 105.4 M 0 87.6 M 0.831 PE 100 100 native 37.9 M 0.0 M 34.1 M 0.648 0.90 0.90 10.00 175 1.05 5.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6908889-1db0-436f-8751-4bd791cbd820/@@download/cross_correlation_plot/ENCFF096WFGENCFF550IEW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB204HFN michael-snyder:L-3291 "ENCFF550IEW,ENCFF096WFG" HiSeq 4000 2017-03-17T16:50:55.233202+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X1kj03694kjvKBZ39QjPk ENCSR877OYD https://www.encodeproject.org/experiments/ENCSR877OYD transcription factor POLR2A-human esophagus squamous epithelium tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF220MDN https://www.encodeproject.org/files/ENCFF220MDN/@@download/ENCFF220MDN.bam ENCFF374CBF https://www.encodeproject.org/files/ENCFF374CBF/@@download/ENCFF374CBF.bam 104.8 M 0 102.1 M 0.974 PE 100 100 native 45.0 M 0.0 M 27.8 M 0.530 0.62 0.60 2.41 180 1.08 6.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/651ae86f-044d-4c9b-a9a2-fd380e17e873/@@download/cross_correlation_plot/ENCFF813TWGENCFF141YYX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB446NVK michael-snyder:L-3225 "ENCFF813TWG,ENCFF141YYX" HiSeq 4000 2017-01-27T06:25:21.478629+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253YxQ0369G8F5yJ0KgyyY8 ENCSR126QXT https://www.encodeproject.org/experiments/ENCSR126QXT control Control-human gastrocnemius medialis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF863CTX https://www.encodeproject.org/files/ENCFF863CTX/@@download/ENCFF863CTX.bam ENCFF641IQX https://www.encodeproject.org/files/ENCFF641IQX/@@download/ENCFF641IQX.bam 114.2 M 0 109.4 M 0.959 PE 100 100 native 46.4 M 0.0 M 35.9 M 0.629 0.79 0.79 4.57 220 1.04 3.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa8d5f34-73f2-4773-a330-2c1ac968f1a0/@@download/cross_correlation_plot/ENCFF630VPVENCFF401JOM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB930GFU michael-snyder:L-2092 "ENCFF630VPV,ENCFF401JOM" HiSeq 4000 2017-02-01T18:20:35.689383+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28Pzy00369654jBFY5X75BF ENCSR139VAY https://www.encodeproject.org/experiments/ENCSR139VAY control Control-human gastrocnemius medialis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF801GEF https://www.encodeproject.org/files/ENCFF801GEF/@@download/ENCFF801GEF.bam ENCFF180TTA https://www.encodeproject.org/files/ENCFF180TTA/@@download/ENCFF180TTA.bam 96.5 M 0 93.5 M 0.969 PE 100 100 native 40.1 M 0.0 M 36.6 M 0.758 0.93 0.93 15.23 145 1.07 3.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/f59d6f4f-e7b8-4cae-9aa2-745edece666e/@@download/cross_correlation_plot/ENCFF626FRUENCFF213WYB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB729RYM michael-snyder:L-3342 "ENCFF213WYB,ENCFF626FRU" HiSeq 4000 2017-03-17T16:50:55.781816+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X0980369PkGJ0J0bfPYyx ENCSR394RPZ https://www.encodeproject.org/experiments/ENCSR394RPZ control Control-human gastrocnemius medialis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF298QEY https://www.encodeproject.org/files/ENCFF298QEY/@@download/ENCFF298QEY.bam ENCFF406AEB https://www.encodeproject.org/files/ENCFF406AEB/@@download/ENCFF406AEB.bam 108.0 M 0 104.9 M 0.972 PE 100 100 native 45.5 M 0.0 M 41.3 M 0.766 0.92 0.92 12.59 150 1.06 3.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/71f4877f-20d2-4170-912a-e0abbcf1290f/@@download/cross_correlation_plot/ENCFF823GXVENCFF247YLS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB054BAG michael-snyder:L-3341 "ENCFF247YLS,ENCFF823GXV" HiSeq 4000 2017-03-17T16:51:40.621271+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35Vzv80369Pv63qPbG3GGkq ENCSR456LAK https://www.encodeproject.org/experiments/ENCSR456LAK control Control-human gastrocnemius medialis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF719VPI https://www.encodeproject.org/files/ENCFF719VPI/@@download/ENCFF719VPI.bam ENCFF518KFT https://www.encodeproject.org/files/ENCFF518KFT/@@download/ENCFF518KFT.bam 106.4 M 0 103.8 M 0.976 PE 100 100 native 45.5 M 0.0 M 39.7 M 0.746 0.88 0.87 7.95 150 1.04 4.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d745ad4-19dd-4c18-9e83-e70f865bab66/@@download/cross_correlation_plot/ENCFF624TVLENCFF974YEI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB066GKG michael-snyder:L-3193 "ENCFF624TVL,ENCFF974YEI" HiSeq 4000 2016-12-10T04:48:33.951417+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QxG80369BV55708G9qV2y ENCSR856OVE https://www.encodeproject.org/experiments/ENCSR856OVE control Control-human gastrocnemius medialis tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF966UPW https://www.encodeproject.org/files/ENCFF966UPW/@@download/ENCFF966UPW.bam ENCFF420UJS https://www.encodeproject.org/files/ENCFF420UJS/@@download/ENCFF420UJS.bam 122.6 M 0 117.6 M 0.959 PE 100 100 native 50.3 M 0.0 M 43.4 M 0.709 0.89 0.89 9.17 210 1.04 3.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/2efbb061-1e95-418d-9b67-e70ffe941b52/@@download/cross_correlation_plot/ENCFF159FMIENCFF409EYE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB766QBO michael-snyder:L-2049 "ENCFF409EYE,ENCFF159FMI" HiSeq 4000 2016-11-25T03:12:56.645007+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQjq803695ZXZ1g5QQy0pg ENCSR903SJC https://www.encodeproject.org/experiments/ENCSR903SJC control Control-human gastrocnemius medialis tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF925ULD https://www.encodeproject.org/files/ENCFF925ULD/@@download/ENCFF925ULD.bam ENCFF378LVR https://www.encodeproject.org/files/ENCFF378LVR/@@download/ENCFF378LVR.bam 53.4 M 0 51.8 M 0.970 PE 100 100 native 22.5 M 0.0 M 21.1 M 0.789 0.96 0.96 24.66 205 1.07 4.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b008329-f26e-44a4-87ec-9d2f2a74d7fb/@@download/cross_correlation_plot/ENCFF346UUTENCFF952ZXY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB766QBO michael-snyder:L-2049 "ENCFF952ZXY,ENCFF346UUT" HiSeq 2000 2016-11-25T03:09:04.481531+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQk0803699j2bFb9QjY1j0 ENCSR915QUT https://www.encodeproject.org/experiments/ENCSR915QUT control Control-human gastrocnemius medialis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF543PTH https://www.encodeproject.org/files/ENCFF543PTH/@@download/ENCFF543PTH.bam ENCFF925TIG https://www.encodeproject.org/files/ENCFF925TIG/@@download/ENCFF925TIG.bam 105.2 M 0 102.1 M 0.971 PE 100 100 native 44.6 M 0.0 M 38.8 M 0.737 0.88 0.87 7.89 155 1.05 4.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/45467cae-692d-4fcd-ab1c-a3583ce4c7bd/@@download/cross_correlation_plot/ENCFF266WQHENCFF321ZBM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB911IJM michael-snyder:L-3194 "ENCFF266WQH,ENCFF321ZBM" HiSeq 4000 2016-12-10T04:53:00.189953+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qzkj03692f1gp513PxY9p ENCSR071XWO https://www.encodeproject.org/experiments/ENCSR071XWO "transcription factor,RNA binding protein" CTCF-human gastrocnemius medialis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF343QUJ https://www.encodeproject.org/files/ENCFF343QUJ/@@download/ENCFF343QUJ.bam ENCFF636BII https://www.encodeproject.org/files/ENCFF636BII/@@download/ENCFF636BII.bam 99.3 M 0 92.7 M 0.934 PE 100 100 native 40.3 M 0.0 M 22.7 M 0.458 0.56 0.54 1.99 235 1.38 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/70bffe4b-4d8f-4af6-b13c-c4c70dc5fa37/@@download/cross_correlation_plot/ENCFF918SCNENCFF998ZNW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB149WJD michael-snyder:L-3201 "ENCFF918SCN,ENCFF998ZNW" HiSeq 4000 2016-12-10T03:21:28.830595+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QkZ803697yz601ypVFgfK ENCSR428BKN https://www.encodeproject.org/experiments/ENCSR428BKN "transcription factor,RNA binding protein" CTCF-human gastrocnemius medialis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF436WOY https://www.encodeproject.org/files/ENCFF436WOY/@@download/ENCFF436WOY.bam ENCFF629ECZ https://www.encodeproject.org/files/ENCFF629ECZ/@@download/ENCFF629ECZ.bam 78.6 M 0 73.8 M 0.940 PE 100 100 native 32.3 M 0.0 M 25.7 M 0.655 0.80 0.80 4.87 210 1.78 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/b204bb0e-9e75-46f6-a1fb-b981842c3970/@@download/cross_correlation_plot/ENCFF296YDQENCFF255INZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB645ZVC michael-snyder:L-3200 "ENCFF255INZ,ENCFF296YDQ" HiSeq 4000 2016-12-10T02:44:33.836777+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QyPQ0369PvYp91zK1Pk8p ENCSR998NQG https://www.encodeproject.org/experiments/ENCSR998NQG "transcription factor,RNA binding protein" CTCF-human gastrocnemius medialis tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF364HTM https://www.encodeproject.org/files/ENCFF364HTM/@@download/ENCFF364HTM.bam ENCFF065PCE https://www.encodeproject.org/files/ENCFF065PCE/@@download/ENCFF065PCE.bam 84.7 M 0 82.5 M 0.975 PE 100 100 native 36.1 M 0.0 M 22.4 M 0.528 0.62 0.61 2.49 205 1.16 2.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/0686da80-0d9d-4581-abd0-f37cc3ddbc6d/@@download/cross_correlation_plot/ENCFF950ZNNENCFF121YCH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB475ZNE michael-snyder:L-3254 "ENCFF950ZNN,ENCFF121YCH" HiSeq 4000 2017-01-31T17:43:23.538543+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2802k003697q099FYYVZQQ2 ENCSR103UPR https://www.encodeproject.org/experiments/ENCSR103UPR transcription factor POLR2A-human gastrocnemius medialis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF013XSL https://www.encodeproject.org/files/ENCFF013XSL/@@download/ENCFF013XSL.bam ENCFF614QDZ https://www.encodeproject.org/files/ENCFF614QDZ/@@download/ENCFF614QDZ.bam 101.3 M 0 97.0 M 0.958 PE 100 100 native 41.5 M 0.0 M 25.5 M 0.504 0.62 0.59 2.31 220 1.94 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/b111eb64-4f6f-4682-9d85-2a0ae2a105e2/@@download/cross_correlation_plot/ENCFF570FCVENCFF713HTL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB374GLQ michael-snyder:L-3336 "ENCFF570FCV,ENCFF713HTL" HiSeq 4000 2017-03-13T17:27:31.217993+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30qvYj0369PY8fv0bkJpY3j ENCSR414SWG https://www.encodeproject.org/experiments/ENCSR414SWG transcription factor POLR2A-human gastrocnemius medialis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF007NAL https://www.encodeproject.org/files/ENCFF007NAL/@@download/ENCFF007NAL.bam ENCFF857OEH https://www.encodeproject.org/files/ENCFF857OEH/@@download/ENCFF857OEH.bam 89.1 M 0 84.6 M 0.950 PE 100 100 native 36.2 M 0.0 M 25.9 M 0.581 0.72 0.71 3.26 220 2.05 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae5ac21c-b936-494c-94df-5d5b9f6229e3/@@download/cross_correlation_plot/ENCFF956QISENCFF300RLH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB157LAI michael-snyder:L-3337 "ENCFF300RLH,ENCFF956QIS" HiSeq 4000 2017-03-13T17:26:55.131812+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30qx280369Jq9Q08P87v12F ENCSR211EXK https://www.encodeproject.org/experiments/ENCSR211EXK control Control-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF502XEU https://www.encodeproject.org/files/ENCFF502XEU/@@download/ENCFF502XEU.bam ENCFF280ABH https://www.encodeproject.org/files/ENCFF280ABH/@@download/ENCFF280ABH.bam 60.3 M 0 58.1 M 0.964 PE 100 None 25.5 M 0.0 M 23.1 M 0.766 0.91 0.91 10.86 185 1.07 3.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f11c4af-bce6-4a74-841d-497dbd7c543d/@@download/cross_correlation_plot/ENCFF432BFBENCFF231JUU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB526NQI michael-snyder:L-2902 "ENCFF432BFB,ENCFF231JUU" HiSeq 2000 2016-05-06T18:17:51.881682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq8680369GbFx9y02x3zJp ENCSR262CPH https://www.encodeproject.org/experiments/ENCSR262CPH control Control-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF206AIY https://www.encodeproject.org/files/ENCFF206AIY/@@download/ENCFF206AIY.bam ENCFF736QIO https://www.encodeproject.org/files/ENCFF736QIO/@@download/ENCFF736QIO.bam 218.0 M 0 210.2 M 0.964 PE 100 100 native 90.1 M 0.0 M 45.7 M 0.419 0.51 0.51 2.02 230 1.03 7.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/be627573-9eb1-4229-a5fd-4969a536072b/@@download/cross_correlation_plot/ENCFF819UOFENCFF036WQP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB515BXD michael-snyder:L-3074 "ENCFF819UOF,ENCFF036WQP" HiSeq 4000 2016-10-27T22:33:01.304580+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bg2Q03694q32PPxBJ6Zyx ENCSR361LSG https://www.encodeproject.org/experiments/ENCSR361LSG control Control-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF267XIT https://www.encodeproject.org/files/ENCFF267XIT/@@download/ENCFF267XIT.bam ENCFF369DRL https://www.encodeproject.org/files/ENCFF369DRL/@@download/ENCFF369DRL.bam 62.7 M 0 61.2 M 0.976 PE 100 None 27.1 M 0.0 M 24.1 M 0.768 0.90 0.89 9.32 200 1.07 3.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/05e08b6e-3bb0-4946-b3fb-bd1ceafdd1b4/@@download/cross_correlation_plot/ENCFF885SDDENCFF390IKC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB213FPP michael-snyder:L-2899 "ENCFF390IKC,ENCFF885SDD" HiSeq 2000 2016-05-06T18:17:40.027023+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqFgj0369GkFPvq42zg1Xf ENCSR372QOY https://www.encodeproject.org/experiments/ENCSR372QOY control Control-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF492TNL https://www.encodeproject.org/files/ENCFF492TNL/@@download/ENCFF492TNL.bam ENCFF698EWN https://www.encodeproject.org/files/ENCFF698EWN/@@download/ENCFF698EWN.bam 99.3 M 0 88.8 M 0.894 PE 100 100 native 38.6 M 0.0 M 34.6 M 0.697 0.90 0.90 9.49 185 1.06 4.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/00cf8f2c-d07c-4f8b-b6dd-aa1175e2268c/@@download/cross_correlation_plot/ENCFF463LCWENCFF751BIN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB993DLL michael-snyder:L-3295 "ENCFF751BIN,ENCFF463LCW" HiSeq 4000 2017-03-17T16:48:10.301126+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X2k80369B3kKqJ1PGzpf7 ENCSR483GTS https://www.encodeproject.org/experiments/ENCSR483GTS control Control-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF401WSJ https://www.encodeproject.org/files/ENCFF401WSJ/@@download/ENCFF401WSJ.bam ENCFF839JJA https://www.encodeproject.org/files/ENCFF839JJA/@@download/ENCFF839JJA.bam 87.8 M 0 80.4 M 0.916 PE 100 100 native 34.7 M 0.0 M 31.4 M 0.715 0.91 0.91 10.66 220 1.06 8.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6bf1791-051b-47bf-9788-f9d1240975ae/@@download/cross_correlation_plot/ENCFF640BFJENCFF420UMA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB748JUG michael-snyder:L-3294 "ENCFF420UMA,ENCFF640BFJ" HiSeq 4000 2017-05-16T05:37:40.580236+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4J1xK80369B0f5Q2XpVKZbX ENCSR692LIH https://www.encodeproject.org/experiments/ENCSR692LIH control Control-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF983YSS https://www.encodeproject.org/files/ENCFF983YSS/@@download/ENCFF983YSS.bam ENCFF764FNP https://www.encodeproject.org/files/ENCFF764FNP/@@download/ENCFF764FNP.bam 191.3 M 0 183.0 M 0.957 PE 100 100 native 78.6 M 0.0 M 41.1 M 0.430 0.53 0.53 2.12 230 1.04 3.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/180a8e53-3b84-404e-b5ac-4d1a25ded22b/@@download/cross_correlation_plot/ENCFF962LAJENCFF557MYB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB975WTN michael-snyder:L-3075 "ENCFF962LAJ,ENCFF557MYB" HiSeq 4000 2016-10-27T22:31:32.483969+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bqf00369PQyG3V5B4505J ENCSR146BGM https://www.encodeproject.org/experiments/ENCSR146BGM "transcription factor,RNA binding protein" CTCF-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF314JRE https://www.encodeproject.org/files/ENCFF314JRE/@@download/ENCFF314JRE.bam ENCFF954MQJ https://www.encodeproject.org/files/ENCFF954MQJ/@@download/ENCFF954MQJ.bam 152.1 M 0 148.3 M 0.975 PE 100 100 native 66.1 M 0.0 M 27.7 M 0.364 0.42 0.40 1.57 210 2.20 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/813c751f-2e7d-47a0-ad30-8d5779a91c6a/@@download/cross_correlation_plot/ENCFF014FJF-ENCFF351KDO_pooledENCFF655EPI-ENCFF467JYT_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB906XDD michael-snyder:L-2900 "ENCFF655EPI,ENCFF467JYT,ENCFF014FJF,ENCFF351KDO" HiSeq 2000 2016-11-15T23:45:11.722325+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bBV000369PqYzGJbxQ7212 ENCSR186NVR https://www.encodeproject.org/experiments/ENCSR186NVR "transcription factor,RNA binding protein" CTCF-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF444NCW https://www.encodeproject.org/files/ENCFF444NCW/@@download/ENCFF444NCW.bam ENCFF558XVQ https://www.encodeproject.org/files/ENCFF558XVQ/@@download/ENCFF558XVQ.bam 98.1 M 0 89.9 M 0.917 PE 100 100 native 39.2 M 0.0 M 27.5 M 0.562 0.70 0.70 3.29 150 1.49 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/b554521c-b791-43e5-b239-e6a211ebfeb3/@@download/cross_correlation_plot/ENCFF858MFWENCFF518YRZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB799RLX michael-snyder:L-3110 "ENCFF858MFW,ENCFF518YRZ" HiSeq 4000 2016-10-27T22:30:33.549481+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F6F0B6003694g1pYBV41B1b3 ENCSR206ETG https://www.encodeproject.org/experiments/ENCSR206ETG "transcription factor,RNA binding protein" CTCF-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF022LUZ https://www.encodeproject.org/files/ENCFF022LUZ/@@download/ENCFF022LUZ.bam ENCFF491QNR https://www.encodeproject.org/files/ENCFF491QNR/@@download/ENCFF491QNR.bam 157.8 M 0 154.0 M 0.976 PE 100 100 native 68.7 M 0.0 M 29.3 M 0.371 0.43 0.42 1.64 210 2.34 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/a85b56e8-1207-40c7-8b83-3a282e6c85ee/@@download/cross_correlation_plot/ENCFF646RMM-ENCFF396OEK_pooledENCFF991PJC-ENCFF210GUT_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB039HTE michael-snyder:L-2897 "ENCFF396OEK,ENCFF646RMM,ENCFF991PJC,ENCFF210GUT" HiSeq 2000 2016-11-15T23:45:30.872260+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bBVF80369Fbg36VZ8Kyk2z ENCSR661XNQ https://www.encodeproject.org/experiments/ENCSR661XNQ "transcription factor,RNA binding protein" CTCF-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF551QCP https://www.encodeproject.org/files/ENCFF551QCP/@@download/ENCFF551QCP.bam ENCFF034MRJ https://www.encodeproject.org/files/ENCFF034MRJ/@@download/ENCFF034MRJ.bam 81.3 M 0 75.0 M 0.922 PE 100 100 native 32.9 M 0.0 M 24.9 M 0.611 0.75 0.75 4.01 160 1.37 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/b28f748e-a48e-47a8-ac8d-b70698dc674b/@@download/cross_correlation_plot/ENCFF531WQPENCFF590HVE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB508JWP michael-snyder:L-3111 "ENCFF531WQP,ENCFF590HVE" HiSeq 4000 2016-10-27T22:25:08.763529+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F6F0B9Q03697Xx7vBQB39491 ENCSR091CSG https://www.encodeproject.org/experiments/ENCSR091CSG transcription factor POLR2A-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF645GMV https://www.encodeproject.org/files/ENCFF645GMV/@@download/ENCFF645GMV.bam ENCFF799ZUM https://www.encodeproject.org/files/ENCFF799ZUM/@@download/ENCFF799ZUM.bam 122.2 M 0 102.4 M 0.838 PE 100 100 native 45.0 M 0.0 M 24.2 M 0.395 0.54 0.52 2.01 190 1.34 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/53c8018f-6b57-4695-9a84-6435818d30bb/@@download/cross_correlation_plot/ENCFF336GMLENCFF163KIH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB333OST michael-snyder:L-3289 "ENCFF163KIH,ENCFF336GML" HiSeq 4000 2017-03-17T16:49:16.504415+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X2Y0036911fqPJjVK5bx9 ENCSR097EEA https://www.encodeproject.org/experiments/ENCSR097EEA transcription factor POLR2A-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF036WJL https://www.encodeproject.org/files/ENCFF036WJL/@@download/ENCFF036WJL.bam ENCFF517UHG https://www.encodeproject.org/files/ENCFF517UHG/@@download/ENCFF517UHG.bam 140.4 M 0 135.8 M 0.967 PE 100 100 native 60.1 M 0.0 M 25.4 M 0.362 0.42 0.42 1.65 215 1.42 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a4dbae1-d353-455c-af9f-d263fd91d085/@@download/cross_correlation_plot/ENCFF545SYX-ENCFF331BQR_pooledENCFF972WGI-ENCFF082IYB_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB548YUT michael-snyder:L-2898 "ENCFF331BQR,ENCFF972WGI,ENCFF545SYX,ENCFF082IYB" HiSeq 2000 2016-11-15T23:43:44.377712+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bBV5j03692Xq74z1ygj5Vz ENCSR367UUC https://www.encodeproject.org/experiments/ENCSR367UUC transcription factor POLR2A-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF740ULF https://www.encodeproject.org/files/ENCFF740ULF/@@download/ENCFF740ULF.bam ENCFF814GOC https://www.encodeproject.org/files/ENCFF814GOC/@@download/ENCFF814GOC.bam 43.9 M 0 42.5 M 0.970 PE 100 100 native 19.0 M 0.0 M 11.4 M 0.522 0.60 0.59 2.31 225 1.37 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/8716719b-f187-43d0-a73f-fc421b6b7ba2/@@download/cross_correlation_plot/ENCFF763EWZENCFF828DEK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB360WHB michael-snyder:L-2901 "ENCFF828DEK,ENCFF763EWZ" HiSeq 2000 2016-11-23T06:50:34.832110+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGqvj03696Xjx9z8bJbf4f ENCSR414TPL https://www.encodeproject.org/experiments/ENCSR414TPL transcription factor POLR2A-human gastroesophageal sphincter tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF962NMX https://www.encodeproject.org/files/ENCFF962NMX/@@download/ENCFF962NMX.bam ENCFF384FGC https://www.encodeproject.org/files/ENCFF384FGC/@@download/ENCFF384FGC.bam 127.2 M 0 57.6 M 0.453 PE 100 100 native 24.8 M 0.0 M 21.3 M 0.336 0.86 0.86 7.23 180 1.35 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/05982346-4aa9-40d4-83a9-46c0aed65ffe/@@download/cross_correlation_plot/ENCFF026VCAENCFF357YNX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB764FZA michael-snyder:L-3449 "ENCFF357YNX,ENCFF026VCA" HiSeq 4000 2017-05-16T17:07:40.430571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4GzfB0036949pF7BjxQ47Xf ENCSR000DYO https://www.encodeproject.org/experiments/ENCSR000DYO transcription factor POLR2A-human GM10847 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000DYL https://www.encodeproject.org/experiments/ENCSR000DYL control rabbit-IgG-control-human GM10847 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF787MRM https://www.encodeproject.org/files/ENCFF787MRM/@@download/ENCFF787MRM.bam ENCFF509WVV https://www.encodeproject.org/files/ENCFF509WVV/@@download/ENCFF509WVV.bam 7.1 M 0 6.9 M 0.967 SE 28 28 native 0.0 M 4.9 M 4.8 M 0.675 0.97 0.98 46.24 110 1.02 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/239b39fd-0d8f-4db5-a61e-d4449ce86574/@@download/cross_correlation_plot/ENCFF000VRR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASV ENCFF000VRR Illumina Genome Analyzer 2016-10-26T17:36:24.772836+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082K7Q0369KPb3j15B4p8v7 ENCSR000DYL https://www.encodeproject.org/experiments/ENCSR000DYL control rabbit-IgG-control-human GM10847 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF890OWQ https://www.encodeproject.org/files/ENCFF890OWQ/@@download/ENCFF890OWQ.bam ENCFF068YTL https://www.encodeproject.org/files/ENCFF068YTL/@@download/ENCFF068YTL.bam 5.7 M 0 5.4 M 0.956 SE 28 28 native 0.0 M 3.9 M 3.8 M 0.676 0.99 0.99 78.24 125 1.03 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8c5dd2b-3e2d-4fa8-9d3a-bb050f9d682b/@@download/cross_correlation_plot/ENCFF000VRP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGJ ENCFF000VRP Illumina Genome Analyzer 2016-10-26T17:36:24.814973+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082KG80369FFbbzvx9jvvy0 ENCSR000DYN https://www.encodeproject.org/experiments/ENCSR000DYN control rabbit-IgG-control-human GM10847 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF369ALO https://www.encodeproject.org/files/ENCFF369ALO/@@download/ENCFF369ALO.bam ENCFF750HFA https://www.encodeproject.org/files/ENCFF750HFA/@@download/ENCFF750HFA.bam 7.2 M 0 6.7 M 0.927 SE 28 28 native 0.0 M 4.7 M 4.6 M 0.633 0.98 0.98 52.28 105 1.03 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/46d825c4-3d23-4570-9d43-4719c1ca9d32/@@download/cross_correlation_plot/ENCFF000VRQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACM ENCFF000VRQ Illumina Genome Analyzer 2016-10-26T17:36:11.816207+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082VFQ0369J2Pxk91P1yF8x ENCSR000DYN https://www.encodeproject.org/experiments/ENCSR000DYN control rabbit-IgG-control-human GM10847 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF545MCH https://www.encodeproject.org/files/ENCFF545MCH/@@download/ENCFF545MCH.bam ENCFF140IDL https://www.encodeproject.org/files/ENCFF140IDL/@@download/ENCFF140IDL.bam 7.5 M 0 7.2 M 0.964 SE 28 28 native 0.0 M 5.2 M 5.0 M 0.668 0.97 0.98 43.52 90 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/7bc8f123-191c-4201-9618-165e3ab087cc/@@download/cross_correlation_plot/ENCFF000VRO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACL ENCFF000VRO Illumina Genome Analyzer 2016-10-26T17:35:40.099584+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082VV803697KPkyX9BPPq7f ENCSR000DYM https://www.encodeproject.org/experiments/ENCSR000DYM transcription factor RELA-human GM10847 immortalized cell line michael-snyder ENCODE2 pending SE "28,34" Illumina Genome Analyzer unreviewed ENCSR778UBR https://www.encodeproject.org/experiments/ENCSR778UBR transcription factor ARID3A-human GM12878 immortalized cell line 5 michael-snyder ENCODE3 GRCh38 ENCFF079ZYM https://www.encodeproject.org/files/ENCFF079ZYM/@@download/ENCFF079ZYM.bam ENCFF947KGN https://www.encodeproject.org/files/ENCFF947KGN/@@download/ENCFF947KGN.bam 78.1 M 0 54.7 M 0.700 PE 100 100 native 24.5 M 0.0 M 16.7 M 0.427 0.68 0.67 2.95 185 1.13 3.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/01431a12-7fd6-47d8-ad51-32331a75789d/@@download/cross_correlation_plot/ENCFF294EUQENCFF742VZZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB425GXU michael-snyder:L-3122 "ENCFF742VZZ,ENCFF294EUQ" HiSeq 4000 2017-01-28T04:50:45.421586+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJg803698PJpF5b3Y5q96 ENCSR778UBR https://www.encodeproject.org/experiments/ENCSR778UBR transcription factor ARID3A-human GM12878 immortalized cell line 6 michael-snyder ENCODE3 GRCh38 ENCFF576RFC https://www.encodeproject.org/files/ENCFF576RFC/@@download/ENCFF576RFC.bam ENCFF798SEF https://www.encodeproject.org/files/ENCFF798SEF/@@download/ENCFF798SEF.bam 84.6 M 0 57.4 M 0.678 PE 100 100 native 25.6 M 0.0 M 17.0 M 0.401 0.66 0.65 2.80 180 1.15 3.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/db697156-c5ba-464a-9d1b-77584829a8ad/@@download/cross_correlation_plot/ENCFF900RHAENCFF993KAU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB712YAL michael-snyder:L-3123 "ENCFF993KAU,ENCFF900RHA" HiSeq 4000 2017-01-28T04:51:28.641221+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJxQ03699PJK0J00Qzbky ENCSR961PPA https://www.encodeproject.org/experiments/ENCSR961PPA transcription factor ATF2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF504YJU https://www.encodeproject.org/files/ENCFF504YJU/@@download/ENCFF504YJU.bam ENCFF636WIZ https://www.encodeproject.org/files/ENCFF636WIZ/@@download/ENCFF636WIZ.bam 139.3 M 0 117.5 M 0.843 PE 100 100 native 50.4 M 0.0 M 37.5 M 0.538 0.74 0.74 3.74 240 1.10 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff44917c-770e-416d-9fbf-d59208f2bd17/@@download/cross_correlation_plot/ENCFF636DBMENCFF803PGO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB737BPP michael-snyder:L-1910 "ENCFF803PGO,ENCFF636DBM" HiSeq 4000 2016-09-16T03:22:51.880630+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyxp8036997y2b0k8qBk4z ENCSR961PPA https://www.encodeproject.org/experiments/ENCSR961PPA transcription factor ATF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF081WNV https://www.encodeproject.org/files/ENCFF081WNV/@@download/ENCFF081WNV.bam ENCFF743PUC https://www.encodeproject.org/files/ENCFF743PUC/@@download/ENCFF743PUC.bam 101.5 M 0 97.8 M 0.963 PE 100 100 native 43.1 M 0.0 M 16.6 M 0.328 0.39 0.40 1.75 235 1.20 2.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d337927-b242-4c45-8684-a17666258ee8/@@download/cross_correlation_plot/ENCFF812RLFENCFF599YET.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB201ZKZ michael-snyder:L-1911 "ENCFF599YET,ENCFF812RLF" HiSeq 4000 2016-09-16T03:18:13.469577+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyxy0036903vFQkJzV6Pv4 ENCSR014YCR https://www.encodeproject.org/experiments/ENCSR014YCR transcription factor ATF7-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF556ZRU https://www.encodeproject.org/files/ENCFF556ZRU/@@download/ENCFF556ZRU.bam ENCFF141CYV https://www.encodeproject.org/files/ENCFF141CYV/@@download/ENCFF141CYV.bam 45.7 M 0 44.7 M 0.979 PE 100 100 native 20.0 M 0.0 M 17.0 M 0.743 0.85 0.85 6.58 225 1.42 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/510f6204-8d1a-4f4e-887f-1c5dc35194e5/@@download/cross_correlation_plot/ENCFF044LTSENCFF531UQG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB591TTK michael-snyder:L-1738 "ENCFF531UQG,ENCFF044LTS" HiSeq 2000 2017-01-26T00:24:00.063708+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB500369JXY1K3433pQKz ENCSR014YCR https://www.encodeproject.org/experiments/ENCSR014YCR transcription factor ATF7-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF860ICZ https://www.encodeproject.org/files/ENCFF860ICZ/@@download/ENCFF860ICZ.bam ENCFF251IUU https://www.encodeproject.org/files/ENCFF251IUU/@@download/ENCFF251IUU.bam 42.3 M 0 41.6 M 0.984 PE 100 100 native 18.7 M 0.0 M 17.0 M 0.805 0.91 0.91 11.26 235 1.45 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/e09974b9-6bcd-4a97-8173-249d139549cf/@@download/cross_correlation_plot/ENCFF317NXGENCFF741BVE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB339BXX michael-snyder:L-1739 "ENCFF317NXG,ENCFF741BVE" HiSeq 2000 2017-01-26T00:23:32.796468+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBPQ03692VYPz2806PPZJ ENCSR636MKU https://www.encodeproject.org/experiments/ENCSR636MKU transcription factor BACH1-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF688OKC https://www.encodeproject.org/files/ENCFF688OKC/@@download/ENCFF688OKC.bam ENCFF792QLV https://www.encodeproject.org/files/ENCFF792QLV/@@download/ENCFF792QLV.bam 72.6 M 0 62.0 M 0.854 PE 100 100 native 27.7 M 0.0 M 23.2 M 0.639 0.84 0.84 6.10 185 1.13 3.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/31c1da62-8e9a-43e4-9518-8df0be09a24f/@@download/cross_correlation_plot/ENCFF445LTVENCFF159UKF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB496SZH michael-snyder:L-3124 "ENCFF159UKF,ENCFF445LTV" HiSeq 4000 2017-01-28T04:51:08.499771+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJFQ0369FB2f75bZ9V3fb ENCSR636MKU https://www.encodeproject.org/experiments/ENCSR636MKU transcription factor BACH1-human GM12878 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF599CQU https://www.encodeproject.org/files/ENCFF599CQU/@@download/ENCFF599CQU.bam ENCFF649NJP https://www.encodeproject.org/files/ENCFF649NJP/@@download/ENCFF649NJP.bam 58.8 M 0 51.2 M 0.871 PE 100 100 native 23.3 M 0.0 M 20.5 M 0.698 0.88 0.88 8.43 155 1.20 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/b143ba51-8ef2-4f62-a456-a17d1b737a3f/@@download/cross_correlation_plot/ENCFF540RXLENCFF907SBN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB881RGF michael-snyder:L-3125 "ENCFF540RXL,ENCFF907SBN" HiSeq 4000 2017-01-28T04:50:19.656855+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJQj0369JXx505Zb65ZQg ENCSR342THD https://www.encodeproject.org/experiments/ENCSR342THD "RNA binding protein,transcription factor" BCLAF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF427CQP https://www.encodeproject.org/files/ENCFF427CQP/@@download/ENCFF427CQP.bam ENCFF780NKT https://www.encodeproject.org/files/ENCFF780NKT/@@download/ENCFF780NKT.bam 83.4 M 0 81.5 M 0.977 PE 100 100 native 35.8 M 0.0 M 29.5 M 0.708 0.82 0.82 5.51 170 1.09 5.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/c07995db-6bf8-4b0e-9862-9ad15fd94909/@@download/cross_correlation_plot/ENCFF027BOYENCFF661STW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB851GYE michael-snyder:L-3368 "ENCFF027BOY,ENCFF661STW" HiSeq 4000 2017-04-09T00:00:23.005283+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z04j80369KyjkjJk6fbQ4P ENCSR342THD https://www.encodeproject.org/experiments/ENCSR342THD "RNA binding protein,transcription factor" BCLAF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF531RDZ https://www.encodeproject.org/files/ENCFF531RDZ/@@download/ENCFF531RDZ.bam ENCFF703ZDY https://www.encodeproject.org/files/ENCFF703ZDY/@@download/ENCFF703ZDY.bam 108.2 M 0 105.7 M 0.977 PE 100 100 native 47.3 M 0.0 M 34.9 M 0.645 0.74 0.73 3.62 180 1.07 4.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/79b143e3-a51a-4402-ab02-60be70730c0a/@@download/cross_correlation_plot/ENCFF296PDUENCFF257GIX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB747KRK michael-snyder:L-3369 "ENCFF257GIX,ENCFF296PDU" HiSeq 4000 2017-04-09T00:01:34.130758+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z04x80369Kx23g3bQybyg9 ENCSR000DZJ https://www.encodeproject.org/experiments/ENCSR000DZJ transcription factor BHLHE40-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF024QRE https://www.encodeproject.org/files/ENCFF024QRE/@@download/ENCFF024QRE.bam ENCFF093TKD https://www.encodeproject.org/files/ENCFF093TKD/@@download/ENCFF093TKD.bam 22.6 M 0 20.0 M 0.883 SE 36 28 28 0.0 M 15.0 M 13.8 M 0.612 0.93 0.93 15.38 120 1.64 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ce9ad48-f3c0-4bb6-8119-91156dc87fe1/@@download/cross_correlation_plot/ENCFF000VSD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIO ENCFF000VSD Illumina Genome Analyzer 2017-01-05T21:28:28.805811+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7g4803697J9fxG4f90kY6 ENCSR000DZJ https://www.encodeproject.org/experiments/ENCSR000DZJ transcription factor BHLHE40-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF435RCL https://www.encodeproject.org/files/ENCFF435RCL/@@download/ENCFF435RCL.bam ENCFF387NFS https://www.encodeproject.org/files/ENCFF387NFS/@@download/ENCFF387NFS.bam 26.7 M 0 25.4 M 0.949 SE 36 28 28 0.0 M 18.8 M 18.0 M 0.673 0.96 0.96 25.77 125 1.19 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/8fbf2de9-8c54-4d94-8fc7-028024b095b4/@@download/cross_correlation_plot/ENCFF000VSF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIL ENCFF000VSF Illumina Genome Analyzer 2017-01-05T21:28:40.314688+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7g9Q03697J9fxG4f90kYP ENCSR987MTA https://www.encodeproject.org/experiments/ENCSR987MTA transcription factor BHLHE40-human GM12878 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF002PPW https://www.encodeproject.org/files/ENCFF002PPW/@@download/ENCFF002PPW.bam ENCFF686AFF https://www.encodeproject.org/files/ENCFF686AFF/@@download/ENCFF686AFF.bam 73.0 M 0 52.0 M 0.713 PE 100 100 native 23.7 M 0.0 M 19.2 M 0.527 0.81 0.81 5.26 170 2.95 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2eb3fea-4a7e-4227-83de-d0ab42fbce9c/@@download/cross_correlation_plot/ENCFF216ZWYENCFF438VPJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB786PXA michael-snyder:L-3126 "ENCFF216ZWY,ENCFF438VPJ" HiSeq 4000 2017-01-28T04:50:31.144342+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJ0803699Y8JF13zFBVY9 ENCSR987MTA https://www.encodeproject.org/experiments/ENCSR987MTA transcription factor BHLHE40-human GM12878 immortalized cell line 5 michael-snyder ENCODE3 GRCh38 ENCFF451KMO https://www.encodeproject.org/files/ENCFF451KMO/@@download/ENCFF451KMO.bam ENCFF153LYV https://www.encodeproject.org/files/ENCFF153LYV/@@download/ENCFF153LYV.bam 72.7 M 0 56.4 M 0.776 PE 100 100 native 25.2 M 0.0 M 21.4 M 0.589 0.85 0.85 6.50 165 1.55 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/128b2456-5890-4727-a59d-59049724f654/@@download/cross_correlation_plot/ENCFF542AWVENCFF588AQE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB215HFO michael-snyder:L-3127 "ENCFF588AQE,ENCFF542AWV" HiSeq 4000 2017-01-28T04:50:46.291405+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kJ5j036977vb214XG2ZqQ ENCSR469WII https://www.encodeproject.org/experiments/ENCSR469WII "transcription factor,chromatin remodeller" BMI1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF023IKP https://www.encodeproject.org/files/ENCFF023IKP/@@download/ENCFF023IKP.bam ENCFF661JYJ https://www.encodeproject.org/files/ENCFF661JYJ/@@download/ENCFF661JYJ.bam 87.0 M 0 84.8 M 0.975 PE 100 100 native 37.4 M 0.0 M 30.7 M 0.706 0.82 0.82 5.29 210 1.07 3.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/0faeeabe-d18b-4fd5-b0c6-657a74417d5e/@@download/cross_correlation_plot/ENCFF422BBZENCFF580NZZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB194CMR michael-snyder:L-3042 "ENCFF422BBZ,ENCFF580NZZ" HiSeq 4000 2016-10-27T22:22:40.843512+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bk9Q0369GJ6xQfbB7F5xg ENCSR469WII https://www.encodeproject.org/experiments/ENCSR469WII "transcription factor,chromatin remodeller" BMI1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF653RTQ https://www.encodeproject.org/files/ENCFF653RTQ/@@download/ENCFF653RTQ.bam ENCFF782ZPU https://www.encodeproject.org/files/ENCFF782ZPU/@@download/ENCFF782ZPU.bam 113.7 M 0 111.1 M 0.977 PE 100 100 native 49.4 M 0.0 M 35.8 M 0.629 0.72 0.71 3.35 210 1.09 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/79d68983-a3d1-43b8-a707-7d33946c22c7/@@download/cross_correlation_plot/ENCFF304NDLENCFF340BKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB675VMV michael-snyder:L-3043 "ENCFF340BKZ,ENCFF304NDL" HiSeq 4000 2016-10-27T22:23:38.992403+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bkJ003695YX1xgJBKFkZZ ENCSR000DZS https://www.encodeproject.org/experiments/ENCSR000DZS transcription factor BRCA1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF651OUX https://www.encodeproject.org/files/ENCFF651OUX/@@download/ENCFF651OUX.bam ENCFF723BPZ https://www.encodeproject.org/files/ENCFF723BPZ/@@download/ENCFF723BPZ.bam 22.5 M 0 21.0 M 0.933 SE 36 28 28 0.0 M 14.5 M 14.3 M 0.634 0.98 0.98 55.82 90 1.06 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e738a94-b176-4a79-b352-d08f250a6e6f/@@download/cross_correlation_plot/ENCFF000VSY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASQ ENCFF000VSY Illumina Genome Analyzer 2017-01-05T21:28:43.645374+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bxQ0369PjBfKG4QzQx0b ENCSR000DZS https://www.encodeproject.org/experiments/ENCSR000DZS transcription factor BRCA1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF365KGA https://www.encodeproject.org/files/ENCFF365KGA/@@download/ENCFF365KGA.bam ENCFF290MTO https://www.encodeproject.org/files/ENCFF290MTO/@@download/ENCFF290MTO.bam 30.3 M 0 28.4 M 0.937 SE 36 28 28 0.0 M 19.5 M 18.9 M 0.623 0.97 0.97 33.03 125 1.05 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/c307e203-6a62-4ff3-a55d-a97b09536b9d/@@download/cross_correlation_plot/ENCFF000VTI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUZ ENCFF000VTI Illumina Genome Analyzer 2017-01-05T21:29:17.173099+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7f280369Pyf0JG49f333J ENCSR681NOM https://www.encodeproject.org/experiments/ENCSR681NOM transcription factor CEBPB-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF787QFQ https://www.encodeproject.org/files/ENCFF787QFQ/@@download/ENCFF787QFQ.bam ENCFF323BGI https://www.encodeproject.org/files/ENCFF323BGI/@@download/ENCFF323BGI.bam 24.5 M 0 24.2 M 0.986 SE 36 36 native 0.0 M 18.5 M 18.3 M 0.746 0.99 0.99 110.20 90 1.02 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c60ed1a-5ac2-47fd-abdd-b0b914a53320/@@download/cross_correlation_plot/ENCFF002ECY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB031VEK michael-snyder:CEBP beta_sc150_GM12878_Rep1 ENCFF002ECY Illumina Genome Analyzer IIx 2016-10-09T17:08:21.847599+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fyj0jv1XvFGkBjjfjPvk ENCSR681NOM https://www.encodeproject.org/experiments/ENCSR681NOM transcription factor CEBPB-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF462BSP https://www.encodeproject.org/files/ENCFF462BSP/@@download/ENCFF462BSP.bam ENCFF810XMW https://www.encodeproject.org/files/ENCFF810XMW/@@download/ENCFF810XMW.bam 21.4 M 0 21.0 M 0.982 SE 36 36 native 0.0 M 16.0 M 15.2 M 0.711 0.95 0.95 20.28 110 1.03 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f117322-b2d9-4d78-8235-6362474cc983/@@download/cross_correlation_plot/ENCFF002EDA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB241ASD michael-snyder:CEBP beta_sc150_GM12878_Rep2 ENCFF002EDA Illumina Genome Analyzer IIx 2016-10-09T17:08:12.813280+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3g080jv1xPyfX78Yz4gKp ENCSR347NOB https://www.encodeproject.org/experiments/ENCSR347NOB "RNA binding protein,transcription factor" CEBPZ-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF917WPY https://www.encodeproject.org/files/ENCFF917WPY/@@download/ENCFF917WPY.bam ENCFF878WNM https://www.encodeproject.org/files/ENCFF878WNM/@@download/ENCFF878WNM.bam 24.9 M 0 22.2 M 0.892 SE 36 36 native 0.0 M 16.9 M 15.8 M 0.635 0.94 0.94 15.97 110 1.04 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/d90764eb-46e5-42d8-9e3b-c7d686473a7f/@@download/cross_correlation_plot/ENCFF818LOF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB978QCG michael-snyder:L-603 ENCFF818LOF Illumina Genome Analyzer IIx 2016-10-09T17:33:38.830957+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4b5Q0jv1QxJBfj5Zb2q6J ENCSR347NOB https://www.encodeproject.org/experiments/ENCSR347NOB "RNA binding protein,transcription factor" CEBPZ-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF923TDM https://www.encodeproject.org/files/ENCFF923TDM/@@download/ENCFF923TDM.bam ENCFF267KMU https://www.encodeproject.org/files/ENCFF267KMU/@@download/ENCFF267KMU.bam 34.1 M 0 32.6 M 0.956 SE 36 36 native 0.0 M 25.8 M 24.3 M 0.713 0.95 0.95 18.72 135 1.03 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/2434cdb8-f90a-48e3-aa65-fff828a814a6/@@download/cross_correlation_plot/ENCFF079VLS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB860FVB michael-snyder:L-606 ENCFF079VLS Illumina Genome Analyzer IIx 2016-10-09T17:34:15.377811+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4b6j0jv1XYYX2Fxk3f5bG ENCSR000DZE https://www.encodeproject.org/experiments/ENCSR000DZE "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF933NBT https://www.encodeproject.org/files/ENCFF933NBT/@@download/ENCFF933NBT.bam ENCFF701YQE https://www.encodeproject.org/files/ENCFF701YQE/@@download/ENCFF701YQE.bam 25.4 M 0 23.4 M 0.923 SE 36 28 28 0.0 M 16.8 M 15.9 M 0.626 0.95 0.95 19.75 110 1.10 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6070bf0-8387-445c-bfa6-2ba52463d908/@@download/cross_correlation_plot/ENCFF000VTK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIP ENCFF000VTK Illumina Genome Analyzer 2017-01-05T21:29:10.458294+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bj80369Kbx0VG4x7400p ENCSR000DZE https://www.encodeproject.org/experiments/ENCSR000DZE "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF065BQF https://www.encodeproject.org/files/ENCFF065BQF/@@download/ENCFF065BQF.bam ENCFF698OEZ https://www.encodeproject.org/files/ENCFF698OEZ/@@download/ENCFF698OEZ.bam 22.6 M 0 22.1 M 0.977 SE 36 28 28 0.0 M 15.7 M 15.3 M 0.678 0.98 0.98 40.33 105 1.04 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed4667b1-029e-445c-ba8c-0c8233a216c6/@@download/cross_correlation_plot/ENCFF000VTM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIQ ENCFF000VTM Illumina Genome Analyzer 2017-01-05T21:29:01.826538+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bpQ03697FPkPG58gbpZ9 ENCSR000DZR https://www.encodeproject.org/experiments/ENCSR000DZR "RNA binding protein,transcription factor" CHD2-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF055UMJ https://www.encodeproject.org/files/ENCFF055UMJ/@@download/ENCFF055UMJ.bam ENCFF201PVR https://www.encodeproject.org/files/ENCFF201PVR/@@download/ENCFF201PVR.bam 25.1 M 0 24.0 M 0.954 SE 36 28 28 0.0 M 17.4 M 16.7 M 0.667 0.96 0.97 36.43 150 1.25 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/12dd3366-fe04-4b94-97dc-2ad3d15867c2/@@download/cross_correlation_plot/ENCFF000VUP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAS ENCFF000VUP Illumina Genome Analyzer 2017-01-05T21:31:11.664222+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7VX003697FPkPG58gbpV4 ENCSR000DZR https://www.encodeproject.org/experiments/ENCSR000DZR "RNA binding protein,transcription factor" CHD2-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF188RRJ https://www.encodeproject.org/files/ENCFF188RRJ/@@download/ENCFF188RRJ.bam ENCFF354UXE https://www.encodeproject.org/files/ENCFF354UXE/@@download/ENCFF354UXE.bam 19.9 M 0 18.7 M 0.939 SE 36 28 28 0.0 M 13.2 M 12.9 M 0.647 0.98 0.98 71.13 115 1.30 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ba41bfd-ad2e-4a5c-a0c7-0b098bf8b799/@@download/cross_correlation_plot/ENCFF000VUO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAR ENCFF000VUO Illumina Genome Analyzer 2017-01-05T21:31:07.630492+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Vg803699GG65G542pjV2 ENCSR398JTO https://www.encodeproject.org/experiments/ENCSR398JTO control Control-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF879YMO https://www.encodeproject.org/files/ENCFF879YMO/@@download/ENCFF879YMO.bam ENCFF479AQE https://www.encodeproject.org/files/ENCFF479AQE/@@download/ENCFF479AQE.bam 90.8 M 0 89.2 M 0.982 PE 100 100 None 39.9 M 0.0 M 35.8 M 0.788 0.90 0.90 10.69 220 1.06 7.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d35f24f-d653-4457-8dbe-9ab88c109483/@@download/cross_correlation_plot/ENCFF002EFTENCFF002EFQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB522JER "michael-snyder:723_B_TruSeq_TTAGGC,michael-snyder:L-480" "ENCFF002EFT,ENCFF002EFQ" HiSeq 2000 2016-05-06T18:21:41.852486+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGX003691Q4QQpZ2q8BQy ENCSR398JTO https://www.encodeproject.org/experiments/ENCSR398JTO control Control-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF574BGV https://www.encodeproject.org/files/ENCFF574BGV/@@download/ENCFF574BGV.bam ENCFF263UJA https://www.encodeproject.org/files/ENCFF263UJA/@@download/ENCFF263UJA.bam 86.8 M 0 85.2 M 0.981 PE 100 100 None 38.1 M 0.0 M 34.0 M 0.783 0.89 0.89 9.28 210 1.07 7.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/164867b8-effb-47f9-a36b-7860d1489f04/@@download/cross_correlation_plot/ENCFF002EFUENCFF002EFS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB793DEG "michael-snyder:723_B_TruSeq_TGACCA,michael-snyder:L-481" "ENCFF002EFS,ENCFF002EFU" HiSeq 2000 2016-05-06T18:22:07.850156+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGb003690j2jgp42pQ2xG ENCSR553NUG https://www.encodeproject.org/experiments/ENCSR553NUG control Control-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF872ERZ https://www.encodeproject.org/files/ENCFF872ERZ/@@download/ENCFF872ERZ.bam ENCFF188SXC https://www.encodeproject.org/files/ENCFF188SXC/@@download/ENCFF188SXC.bam 36.1 M 0 35.7 M 0.988 SE 36 36 None 0.0 M 26.7 M 25.5 M 0.707 0.96 0.96 27.97 120 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e5d9ae8-075a-4cfb-b01c-ac3f68ade82b/@@download/cross_correlation_plot/ENCFF002ECR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB321YWO michael-snyder:Input_GM12878_Rep1 ENCFF002ECR Illumina Genome Analyzer IIx 2016-05-06T18:11:50.579157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqP3j036929FJGg42Xq1zv ENCSR553NUG https://www.encodeproject.org/experiments/ENCSR553NUG control Control-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF272DEZ https://www.encodeproject.org/files/ENCFF272DEZ/@@download/ENCFF272DEZ.bam ENCFF117MXN https://www.encodeproject.org/files/ENCFF117MXN/@@download/ENCFF117MXN.bam 40.0 M 0 39.8 M 0.993 SE 36 36 None 0.0 M 31.8 M 29.4 M 0.735 0.93 0.93 15.11 150 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ae6fd2a-a0bf-43c0-a260-93b131485d3b/@@download/cross_correlation_plot/ENCFF002ECP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB428BHK michael-snyder:Input_GM12878_Rep2 ENCFF002ECP Illumina Genome Analyzer IIx 2016-05-06T18:11:21.885592+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqP7j036986q4kkQ2Q0KY5 ENCSR956WYO https://www.encodeproject.org/experiments/ENCSR956WYO control Control-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF666ATR https://www.encodeproject.org/files/ENCFF666ATR/@@download/ENCFF666ATR.bam ENCFF518ORR https://www.encodeproject.org/files/ENCFF518ORR/@@download/ENCFF518ORR.bam 127.8 M 0 121.4 M 0.950 PE 100 100 native 54.0 M 0.0 M 34.5 M 0.540 0.64 0.64 2.74 220 1.05 4.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/0b9618a8-a30d-408f-8010-01dc73abe0de/@@download/cross_correlation_plot/ENCFF202OMWENCFF349FFX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB159NTM michael-snyder:L-3062 "ENCFF349FFX,ENCFF202OMW" HiSeq 4000 2016-09-16T03:20:51.673388+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGygk003696x9VJV48y49z9 ENCSR956WYO https://www.encodeproject.org/experiments/ENCSR956WYO control Control-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF322NTO https://www.encodeproject.org/files/ENCFF322NTO/@@download/ENCFF322NTO.bam ENCFF046KKT https://www.encodeproject.org/files/ENCFF046KKT/@@download/ENCFF046KKT.bam 151.8 M 0 148.9 M 0.981 PE 100 100 native 66.6 M 0.0 M 35.6 M 0.469 0.54 0.54 2.16 225 1.05 3.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/879a41fe-0162-4a99-8475-dfedc07b83c9/@@download/cross_correlation_plot/ENCFF829GAKENCFF647DBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB054PCI michael-snyder:L-3063 "ENCFF647DBV,ENCFF829GAK" HiSeq 4000 2016-09-16T03:22:08.135355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGygvj0369JzPBF2JXk4PQv ENCSR000DZN https://www.encodeproject.org/experiments/ENCSR000DZN "transcription factor,RNA binding protein" CTCF-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF162QXM https://www.encodeproject.org/files/ENCFF162QXM/@@download/ENCFF162QXM.bam ENCFF869TVW https://www.encodeproject.org/files/ENCFF869TVW/@@download/ENCFF869TVW.bam 29.5 M 0 27.7 M 0.940 SE 36 28 28 0.0 M 22.2 M 16.6 M 0.562 0.75 0.84 9.91 95 4.93 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/a59e9ea2-b685-4531-9d7d-02f6961f3689/@@download/cross_correlation_plot/ENCFF000VUW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABM ENCFF000VUW Illumina Genome Analyzer 2017-01-05T21:18:39.057197+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7yFQ0369P4Vg0G4JKxZb6 ENCSR000DZN https://www.encodeproject.org/experiments/ENCSR000DZN "transcription factor,RNA binding protein" CTCF-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF033WII https://www.encodeproject.org/files/ENCFF033WII/@@download/ENCFF033WII.bam ENCFF037QRA https://www.encodeproject.org/files/ENCFF037QRA/@@download/ENCFF037QRA.bam 16.4 M 0 14.8 M 0.903 SE 36 28 28 0.0 M 10.8 M 9.7 M 0.592 0.91 0.93 15.83 110 3.74 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e8048b3-f7b3-4eed-b348-29a366bd480f/@@download/cross_correlation_plot/ENCFF000VUU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABS ENCFF000VUU Illumina Genome Analyzer 2017-01-05T21:18:25.807299+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7yV00369J2YG2G5JGYVk4 ENCSR000DYR https://www.encodeproject.org/experiments/ENCSR000DYR transcription factor CUX1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF313RZR https://www.encodeproject.org/files/ENCFF313RZR/@@download/ENCFF313RZR.bam ENCFF111WAU https://www.encodeproject.org/files/ENCFF111WAU/@@download/ENCFF111WAU.bam 25.0 M 0 21.5 M 0.859 SE 36 28 28 0.0 M 15.4 M 14.2 M 0.567 0.92 0.92 12.38 120 1.06 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1fc8e0b-f7df-4130-8c50-fa7acb69e423/@@download/cross_correlation_plot/ENCFF000VSS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGM ENCFF000VSS Illumina Genome Analyzer 2017-01-05T21:29:34.436266+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7b6Q0369Kbx0VG4x7400G ENCSR000DYR https://www.encodeproject.org/experiments/ENCSR000DYR transcription factor CUX1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF649NFF https://www.encodeproject.org/files/ENCFF649NFF/@@download/ENCFF649NFF.bam ENCFF876YXO https://www.encodeproject.org/files/ENCFF876YXO/@@download/ENCFF876YXO.bam 37.5 M 0 35.3 M 0.941 SE 36 28 28 0.0 M 26.2 M 24.4 M 0.650 0.93 0.93 14.79 130 1.04 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/495d8a3c-cdae-45c0-8070-67aa28ee4f16/@@download/cross_correlation_plot/ENCFF000VSV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADX ENCFF000VSV Illumina Genome Analyzer 2017-01-05T21:29:48.844665+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7b8j0369P4Vg0G4JKxZV8 ENCSR509FWH https://www.encodeproject.org/experiments/ENCSR509FWH transcription factor DPF2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF768YUH https://www.encodeproject.org/files/ENCFF768YUH/@@download/ENCFF768YUH.bam ENCFF658QNN https://www.encodeproject.org/files/ENCFF658QNN/@@download/ENCFF658QNN.bam 96.7 M 0 66.0 M 0.682 PE 100 100 native 28.4 M 0.0 M 25.7 M 0.532 0.90 0.90 10.42 200 1.15 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/77f15b34-68ad-4d6c-8838-3c3340704d7c/@@download/cross_correlation_plot/ENCFF845GWEENCFF442RZV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB100PSH michael-snyder:L-3416 "ENCFF845GWE,ENCFF442RZV" HiSeq 4000 2017-04-19T10:55:32.540545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q84q003696BK1qBYG12KYp ENCSR509FWH https://www.encodeproject.org/experiments/ENCSR509FWH transcription factor DPF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF022YLX https://www.encodeproject.org/files/ENCFF022YLX/@@download/ENCFF022YLX.bam ENCFF370FGY https://www.encodeproject.org/files/ENCFF370FGY/@@download/ENCFF370FGY.bam 86.8 M 0 64.0 M 0.737 PE 100 100 native 27.6 M 0.0 M 22.4 M 0.517 0.81 0.81 5.18 205 1.18 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/22df790a-680d-412e-b4b5-82d516a0ce69/@@download/cross_correlation_plot/ENCFF305XXHENCFF433QIM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB141ZDM michael-snyder:L-3417 "ENCFF433QIM,ENCFF305XXH" HiSeq 4000 2017-04-19T10:54:54.551885+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q854803697B34KBY6268zz ENCSR000DYY https://www.encodeproject.org/experiments/ENCSR000DYY transcription factor E2F4-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF926BIU https://www.encodeproject.org/files/ENCFF926BIU/@@download/ENCFF926BIU.bam ENCFF781WSB https://www.encodeproject.org/files/ENCFF781WSB/@@download/ENCFF781WSB.bam 25.4 M 0 24.8 M 0.977 SE 36 28 28 0.0 M 17.9 M 17.2 M 0.676 0.96 0.96 25.78 120 1.08 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/1992ded3-72ba-46d3-ac70-b34b88fab66d/@@download/cross_correlation_plot/ENCFF000VUJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGW ENCFF000VUJ Illumina Genome Analyzer 2017-01-05T21:30:44.825885+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Zk80369J2YG2G5JGYVb3 ENCSR000DYY https://www.encodeproject.org/experiments/ENCSR000DYY transcription factor E2F4-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF189DMF https://www.encodeproject.org/files/ENCFF189DMF/@@download/ENCFF189DMF.bam ENCFF804JMX https://www.encodeproject.org/files/ENCFF804JMX/@@download/ENCFF804JMX.bam 29.4 M 0 29.1 M 0.990 SE 36 28 28 0.0 M 20.9 M 20.3 M 0.688 0.97 0.97 32.45 120 1.05 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/dcfc1399-0029-4d08-9f0c-3eff4627f5e2/@@download/cross_correlation_plot/ENCFF000VUL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABC ENCFF000VUL Illumina Genome Analyzer 2017-01-05T21:30:35.723595+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Zqj03697FPkPG58gbpYp ENCSR000DZQ https://www.encodeproject.org/experiments/ENCSR000DZQ transcription factor EBF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF746KYL https://www.encodeproject.org/files/ENCFF746KYL/@@download/ENCFF746KYL.bam ENCFF891JOR https://www.encodeproject.org/files/ENCFF891JOR/@@download/ENCFF891JOR.bam 42.3 M 0 36.5 M 0.862 SE 36 28 28 0.0 M 26.0 M 23.6 M 0.558 0.91 0.92 13.61 135 1.40 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ad5e08d-5708-4952-b8a9-892cfc6a44f9/@@download/cross_correlation_plot/ENCFF000VVP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APR ENCFF000VVP Illumina Genome Analyzer 2017-01-05T21:21:46.313637+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7vZQ0369J2YG2G5JGYVjG ENCSR000DZQ https://www.encodeproject.org/experiments/ENCSR000DZQ transcription factor EBF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF340SPK https://www.encodeproject.org/files/ENCFF340SPK/@@download/ENCFF340SPK.bam ENCFF891SOM https://www.encodeproject.org/files/ENCFF891SOM/@@download/ENCFF891SOM.bam 30.2 M 0 27.6 M 0.915 SE 36 28 28 0.0 M 21.1 M 18.2 M 0.604 0.87 0.92 15.75 110 2.24 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/5df94b45-a989-46a3-8f22-81cb2354c140/@@download/cross_correlation_plot/ENCFF000VVQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APS ENCFF000VVQ Illumina Genome Analyzer 2017-01-05T21:21:08.780779+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7vkQ03697J9fxG4f90kbQ ENCSR841NDX https://www.encodeproject.org/experiments/ENCSR841NDX transcription factor ELF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF028TNY https://www.encodeproject.org/files/ENCFF028TNY/@@download/ENCFF028TNY.bam ENCFF555KDG https://www.encodeproject.org/files/ENCFF555KDG/@@download/ENCFF555KDG.bam 97.4 M 0 94.1 M 0.965 PE 100 100 native 41.8 M 0.0 M 36.2 M 0.742 0.87 0.86 7.32 155 1.38 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9504b5e-9a66-4640-b25f-a849ad62820f/@@download/cross_correlation_plot/ENCFF164VNMENCFF825EGN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB597RSH michael-snyder:L-3507 "ENCFF164VNM,ENCFF825EGN" HiSeq 4000 2017-06-23T03:14:01.714922+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Zp80369FxjJB131Zqf5p ENCSR841NDX https://www.encodeproject.org/experiments/ENCSR841NDX transcription factor ELF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF444PPF https://www.encodeproject.org/files/ENCFF444PPF/@@download/ENCFF444PPF.bam ENCFF816AFX https://www.encodeproject.org/files/ENCFF816AFX/@@download/ENCFF816AFX.bam 116.1 M 0 112.0 M 0.965 PE 100 100 native 50.0 M 0.0 M 40.1 M 0.691 0.80 0.80 4.89 175 1.34 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/83ff0a91-6f7b-4237-a4c5-c4f880a57f84/@@download/cross_correlation_plot/ENCFF862VDDENCFF814SDG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB081NDC michael-snyder:L-3508 "ENCFF814SDG,ENCFF862VDD" HiSeq 4000 2017-06-23T04:28:57.426731+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Zxj0369841Zz13XjfZvJ ENCSR000DZB https://www.encodeproject.org/experiments/ENCSR000DZB transcription factor ELK1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF211VKF https://www.encodeproject.org/files/ENCFF211VKF/@@download/ENCFF211VKF.bam ENCFF766YFE https://www.encodeproject.org/files/ENCFF766YFE/@@download/ENCFF766YFE.bam 30.1 M 0 29.4 M 0.978 SE 36 28 28 0.0 M 21.3 M 20.2 M 0.670 0.95 0.96 30.56 115 1.04 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/44b5649a-b5e0-459b-8925-b85852a93c9e/@@download/cross_correlation_plot/ENCFF000VUY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFT ENCFF000VUY Illumina Genome Analyzer 2017-01-05T21:30:42.543618+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7b1j0369Pyf0JG49f332g ENCSR000DZB https://www.encodeproject.org/experiments/ENCSR000DZB transcription factor ELK1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF784XUE https://www.encodeproject.org/files/ENCFF784XUE/@@download/ENCFF784XUE.bam ENCFF156QYK https://www.encodeproject.org/files/ENCFF156QYK/@@download/ENCFF156QYK.bam 29.2 M 0 27.8 M 0.953 SE 36 28 28 0.0 M 19.8 M 18.6 M 0.639 0.94 0.94 17.61 110 1.05 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/a21fa6f3-3456-4182-b54a-de5958952334/@@download/cross_correlation_plot/ENCFF000VVA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFU ENCFF000VVA Illumina Genome Analyzer 2017-01-05T21:29:59.715409+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7b400369Pyf0JG49f332z ENCSR000DZD https://www.encodeproject.org/experiments/ENCSR000DZD transcription factor EP300-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF036AJQ https://www.encodeproject.org/files/ENCFF036AJQ/@@download/ENCFF036AJQ.bam ENCFF497KQT https://www.encodeproject.org/files/ENCFF497KQT/@@download/ENCFF497KQT.bam 28.7 M 0 27.6 M 0.959 SE 36 28 28 0.0 M 20.3 M 18.5 M 0.642 0.91 0.91 10.81 130 1.18 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/55136491-3eec-491d-97ef-a56517f83b88/@@download/cross_correlation_plot/ENCFF000WAM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB838QPB michael-snyder:P300_sc585_GM12878_Rep1 ENCFF000WAM Illumina Genome Analyzer IIx 2017-01-05T21:25:56.928459+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7k500369J2YG2G5JGYVg1 ENCSR000DZD https://www.encodeproject.org/experiments/ENCSR000DZD transcription factor EP300-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF881THF https://www.encodeproject.org/files/ENCFF881THF/@@download/ENCFF881THF.bam ENCFF273YVM https://www.encodeproject.org/files/ENCFF273YVM/@@download/ENCFF273YVM.bam 25.1 M 0 24.2 M 0.965 SE 36 28 28 0.0 M 17.6 M 16.3 M 0.651 0.93 0.93 14.32 130 1.08 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/79bdae8c-5c6e-4406-ba6f-9b0da71efcd8/@@download/cross_correlation_plot/ENCFF000WAO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB644STJ michael-snyder:P300_sc585_GM12878_Rep2 ENCFF000WAO Illumina Genome Analyzer IIx 2017-01-05T21:25:48.828487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7kK803699GG65G542pjZ2 ENCSR000DZG https://www.encodeproject.org/experiments/ENCSR000DZG transcription factor EP300-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF120MJN https://www.encodeproject.org/files/ENCFF120MJN/@@download/ENCFF120MJN.bam ENCFF084NIJ https://www.encodeproject.org/files/ENCFF084NIJ/@@download/ENCFF084NIJ.bam 19.2 M 0 18.9 M 0.988 SE 36 28 28 0.0 M 13.7 M 13.5 M 0.703 0.98 0.98 66.67 120 1.28 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec75d210-a84c-4562-8a0a-366a4895dfe4/@@download/cross_correlation_plot/ENCFF000WAV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATY ENCFF000WAV Illumina Genome Analyzer 2017-01-05T21:21:25.303015+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7vzQ0369Kbx0VG4x7403q ENCSR000DZG https://www.encodeproject.org/experiments/ENCSR000DZG transcription factor EP300-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF832UST https://www.encodeproject.org/files/ENCFF832UST/@@download/ENCFF832UST.bam ENCFF241IKD https://www.encodeproject.org/files/ENCFF241IKD/@@download/ENCFF241IKD.bam 20.6 M 0 20.2 M 0.981 SE 36 28 28 0.0 M 14.7 M 14.2 M 0.688 0.97 0.97 31.24 110 1.10 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0a249c6-55e5-4fcd-9c49-caa1ef962bfd/@@download/cross_correlation_plot/ENCFF000WAX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEJ ENCFF000WAX Illumina Genome Analyzer 2017-01-05T21:18:30.108780+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7x500369Kbx0VG4x74044 ENCSR000DYQ https://www.encodeproject.org/experiments/ENCSR000DYQ transcription factor ESRRA-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF403OML https://www.encodeproject.org/files/ENCFF403OML/@@download/ENCFF403OML.bam ENCFF180DFG https://www.encodeproject.org/files/ENCFF180DFG/@@download/ENCFF180DFG.bam 27.4 M 0 27.1 M 0.987 SE 36 36 native 0.0 M 21.5 M 19.3 M 0.704 0.90 0.90 9.43 140 1.04 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6cf6740-2e12-4c66-bdfc-668bb39814ae/@@download/cross_correlation_plot/ENCFF000VVG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFO ENCFF000VVG Illumina Genome Analyzer 2016-12-11T04:05:51.085790+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1653Qj03692f1gp513PxgQ8 ENCSR000DYQ https://www.encodeproject.org/experiments/ENCSR000DYQ transcription factor ESRRA-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF361YDK https://www.encodeproject.org/files/ENCFF361YDK/@@download/ENCFF361YDK.bam ENCFF166EOU https://www.encodeproject.org/files/ENCFF166EOU/@@download/ENCFF166EOU.bam 32.1 M 0 30.8 M 0.960 SE 36 36 native 0.0 M 23.2 M 21.0 M 0.656 0.91 0.91 11.05 120 1.04 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/e51f7c78-7e2d-4deb-a542-9f4770ef9ee5/@@download/cross_correlation_plot/ENCFF000VVI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFS ENCFF000VVI Illumina Genome Analyzer 2016-12-11T04:06:46.613771+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1653f80369PvYp91zK1PxPF ENCSR597VGC https://www.encodeproject.org/experiments/ENCSR597VGC transcription factor ETV6-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF235FDS https://www.encodeproject.org/files/ENCFF235FDS/@@download/ENCFF235FDS.bam ENCFF865MRA https://www.encodeproject.org/files/ENCFF865MRA/@@download/ENCFF865MRA.bam 57.0 M 0 55.8 M 0.979 PE 100 100 native 25.1 M 0.0 M 15.3 M 0.537 0.61 0.58 2.18 220 1.10 16.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/e799c872-92f9-4ae6-9385-f0c7f505bed7/@@download/cross_correlation_plot/ENCFF002EKBENCFF002EKC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB417CPA michael-snyder:795_A_TruSeq_ATCACG "ENCFF002EKC,ENCFF002EKB" HiSeq 2000 2016-10-09T17:06:02.797990+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6FQ00jv1vY92b0GYjVGJ1 ENCSR597VGC https://www.encodeproject.org/experiments/ENCSR597VGC transcription factor ETV6-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF714EVJ https://www.encodeproject.org/files/ENCFF714EVJ/@@download/ENCFF714EVJ.bam ENCFF642CBH https://www.encodeproject.org/files/ENCFF642CBH/@@download/ENCFF642CBH.bam 61.2 M 0 59.9 M 0.978 PE 100 100 native 26.9 M 0.0 M 16.8 M 0.548 0.62 0.60 2.26 210 1.09 14.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/01467262-48ce-4126-a864-3a43bbb1793c/@@download/cross_correlation_plot/ENCFF002EJZENCFF002EKA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB748PSO michael-snyder:795_A_TruSeq_CGATGT "ENCFF002EJZ,ENCFF002EKA" HiSeq 2000 2016-10-09T17:06:17.886358+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6FX00jv1XvFGkBjjfjV0J ENCSR861JUQ https://www.encodeproject.org/experiments/ENCSR861JUQ transcription factor FOXK2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF754BHC https://www.encodeproject.org/files/ENCFF754BHC/@@download/ENCFF754BHC.bam ENCFF906XQL https://www.encodeproject.org/files/ENCFF906XQL/@@download/ENCFF906XQL.bam 172.4 M 0 155.2 M 0.900 PE 100 100 native 65.9 M 0.0 M 55.0 M 0.638 0.84 0.83 5.93 230 1.07 3.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5e18903-fddf-410c-8dc8-3c1d96543a6a/@@download/cross_correlation_plot/ENCFF108FHIENCFF863MQV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB344OMN michael-snyder:L-1940 "ENCFF863MQV,ENCFF108FHI" HiSeq 4000 2017-01-24T19:08:49.988360+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23881Q0369JF4QP8xxppGqg ENCSR861JUQ https://www.encodeproject.org/experiments/ENCSR861JUQ transcription factor FOXK2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF469MPJ https://www.encodeproject.org/files/ENCFF469MPJ/@@download/ENCFF469MPJ.bam ENCFF006TBL https://www.encodeproject.org/files/ENCFF006TBL/@@download/ENCFF006TBL.bam 181.7 M 0 167.0 M 0.919 PE 100 100 native 70.9 M 0.0 M 55.6 M 0.612 0.79 0.78 4.48 230 1.08 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bfc33e6-4112-4e40-a5a6-f08e58b7c0a9/@@download/cross_correlation_plot/ENCFF783FYLENCFF923XLP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB000IIU michael-snyder:L-1941 "ENCFF783FYL,ENCFF923XLP" HiSeq 4000 2017-01-24T21:21:44.512208+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F23887j0369BQ3qg2vYVYbb2 ENCSR828NCB https://www.encodeproject.org/experiments/ENCSR828NCB transcription factor GATAD2B-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF831ANK https://www.encodeproject.org/files/ENCFF831ANK/@@download/ENCFF831ANK.bam ENCFF258PBX https://www.encodeproject.org/files/ENCFF258PBX/@@download/ENCFF258PBX.bam 114.2 M 0 55.8 M 0.489 PE 100 100 native 24.1 M 0.0 M 19.5 M 0.341 0.81 0.81 5.14 205 1.15 2.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/2166cd1d-25ea-4807-bd80-f1655d1a92c6/@@download/cross_correlation_plot/ENCFF785LRFENCFF023QAR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB122YZP michael-snyder:L-3418 "ENCFF785LRF,ENCFF023QAR" HiSeq 4000 2017-04-19T10:54:58.156447+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q82QQ0369B30JzPPqz8xVf ENCSR828NCB https://www.encodeproject.org/experiments/ENCSR828NCB transcription factor GATAD2B-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF159BQG https://www.encodeproject.org/files/ENCFF159BQG/@@download/ENCFF159BQG.bam ENCFF115DER https://www.encodeproject.org/files/ENCFF115DER/@@download/ENCFF115DER.bam 67.6 M 0 51.4 M 0.760 PE 100 100 native 21.7 M 0.0 M 16.3 M 0.482 0.75 0.75 3.90 225 1.15 2.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/1604cbb3-e4f3-434f-b8b5-68868e14889c/@@download/cross_correlation_plot/ENCFF263DDPENCFF861XUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB501GUQ michael-snyder:L-3419 "ENCFF263DDP,ENCFF861XUI" HiSeq 4000 2017-04-19T17:29:19.903490+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q84VQ0369B068GBZ3fGqP2 ENCSR514VAY https://www.encodeproject.org/experiments/ENCSR514VAY transcription factor HCFC1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF019MMH https://www.encodeproject.org/files/ENCFF019MMH/@@download/ENCFF019MMH.bam ENCFF209LCU https://www.encodeproject.org/files/ENCFF209LCU/@@download/ENCFF209LCU.bam 33.2 M 0 32.3 M 0.972 SE 36 36 native 0.0 M 24.5 M 23.4 M 0.706 0.96 0.96 25.13 110 1.13 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/784141bb-0616-45f3-96e5-5f249e6419f9/@@download/cross_correlation_plot/ENCFF002EAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB339IXL michael-snyder:HCFC1_NB100-68209_GM12878_Rep1 ENCFF002EAN Illumina Genome Analyzer IIx 2016-10-09T17:09:41.347254+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40400jv1zBYbxYJ5zzz41 ENCSR514VAY https://www.encodeproject.org/experiments/ENCSR514VAY transcription factor HCFC1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF057WQP https://www.encodeproject.org/files/ENCFF057WQP/@@download/ENCFF057WQP.bam ENCFF601BPA https://www.encodeproject.org/files/ENCFF601BPA/@@download/ENCFF601BPA.bam 32.9 M 0 31.8 M 0.966 SE 36 36 native 0.0 M 24.4 M 22.9 M 0.697 0.94 0.95 20.36 115 1.19 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a73214a-bb08-4353-be78-259c89ba69dc/@@download/cross_correlation_plot/ENCFF002EAO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB211NAT michael-snyder:HCFC1_NB100-68209_GM12878_Rep2 ENCFF002EAO Illumina Genome Analyzer IIx 2016-10-09T17:09:47.679314+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40580jv1zBYbxYJ5zzz4B ENCSR145XQO https://www.encodeproject.org/experiments/ENCSR145XQO "RNA binding protein,transcription factor" HDGF-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF121WPI https://www.encodeproject.org/files/ENCFF121WPI/@@download/ENCFF121WPI.bam ENCFF186XNP https://www.encodeproject.org/files/ENCFF186XNP/@@download/ENCFF186XNP.bam 83.8 M 0 81.9 M 0.978 PE 100 100 native 36.5 M 0.0 M 36.4 M 0.868 1.00 1.00 299.02 205 1.06 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/387d55c8-6344-4b4d-9e6a-71ca580f057b/@@download/cross_correlation_plot/ENCFF088UFAENCFF918XGV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB722AKA michael-snyder:L-1950 "ENCFF918XGV,ENCFF088UFA" HiSeq 2000 2016-10-09T17:19:44.369620+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fF00jv1XvFGkBjjfjPv0 ENCSR145XQO https://www.encodeproject.org/experiments/ENCSR145XQO "RNA binding protein,transcription factor" HDGF-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF773BVT https://www.encodeproject.org/files/ENCFF773BVT/@@download/ENCFF773BVT.bam ENCFF189AGH https://www.encodeproject.org/files/ENCFF189AGH/@@download/ENCFF189AGH.bam 80.2 M 0 78.5 M 0.979 PE 100 100 native 34.9 M 0.0 M 34.7 M 0.866 1.00 1.00 234.01 205 1.06 2.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/a151a292-86bc-4625-8a1d-1c03e7f9b6b7/@@download/cross_correlation_plot/ENCFF690LCGENCFF019KRR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB434KMC michael-snyder:L-1951 "ENCFF690LCG,ENCFF019KRR" HiSeq 2000 2016-10-09T17:15:21.523182+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fGj0jv1vY92b0GYjVFJv ENCSR009MBP https://www.encodeproject.org/experiments/ENCSR009MBP transcription factor HSF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF139IMF https://www.encodeproject.org/files/ENCFF139IMF/@@download/ENCFF139IMF.bam ENCFF175IME https://www.encodeproject.org/files/ENCFF175IME/@@download/ENCFF175IME.bam 27.7 M 0 27.4 M 0.988 SE 36 36 native 0.0 M 21.9 M 18.1 M 0.652 0.83 0.82 5.41 130 1.04 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/23d21941-e617-4fec-aa5a-bc58e759be1f/@@download/cross_correlation_plot/ENCFF002EAM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555LFM michael-snyder:HSF1_sc-9144_GM12878_Rep1 ENCFF002EAM Illumina Genome Analyzer IIx 2016-10-29T18:00:31.731752+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B24XQ0jv1ZfxGgzJ8XqbPZ ENCSR009MBP https://www.encodeproject.org/experiments/ENCSR009MBP transcription factor HSF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF778CYP https://www.encodeproject.org/files/ENCFF778CYP/@@download/ENCFF778CYP.bam ENCFF547IRX https://www.encodeproject.org/files/ENCFF547IRX/@@download/ENCFF547IRX.bam 30.8 M 0 30.0 M 0.975 SE 36 36 native 0.0 M 23.6 M 20.3 M 0.659 0.86 0.86 7.02 140 1.03 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/792cb20f-cb2d-4f69-a29f-63d375900fc2/@@download/cross_correlation_plot/ENCFF002EAU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB261BJG michael-snyder:HSF1_sc-9144_GM12878_Rep2 ENCFF002EAU Illumina Genome Analyzer IIx 2016-10-29T18:00:39.912442+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B24b80jv1X404175P5YZYP ENCSR441VHN https://www.encodeproject.org/experiments/ENCSR441VHN transcription factor IKZF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF723MRH https://www.encodeproject.org/files/ENCFF723MRH/@@download/ENCFF723MRH.bam ENCFF862UTF https://www.encodeproject.org/files/ENCFF862UTF/@@download/ENCFF862UTF.bam 115.0 M 0 83.8 M 0.729 PE 100 100 native 36.4 M 0.0 M 30.3 M 0.527 0.83 0.83 5.95 215 1.23 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/a34de96d-498f-4847-b4a5-304a640e9684/@@download/cross_correlation_plot/ENCFF455PUNENCFF788SAX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB437BZH michael-snyder:L-3420 "ENCFF788SAX,ENCFF455PUN" HiSeq 4000 2017-05-05T23:21:39.834675+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vbj03698bkBg707zYXq8 ENCSR441VHN https://www.encodeproject.org/experiments/ENCSR441VHN transcription factor IKZF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF106ICW https://www.encodeproject.org/files/ENCFF106ICW/@@download/ENCFF106ICW.bam ENCFF503JBL https://www.encodeproject.org/files/ENCFF503JBL/@@download/ENCFF503JBL.bam 122.1 M 0 104.9 M 0.859 PE 100 100 native 46.5 M 0.0 M 39.6 M 0.649 0.85 0.85 6.61 195 1.27 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/7025143f-edb6-49ea-a73e-a8d5e8779b4e/@@download/cross_correlation_plot/ENCFF249RTDENCFF801ZZV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB230GVY michael-snyder:L-3421 "ENCFF249RTD,ENCFF801ZZV" HiSeq 4000 2017-05-06T01:08:21.984807+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vkj03699xk39703jJy6z ENCSR874AFU https://www.encodeproject.org/experiments/ENCSR874AFU transcription factor IKZF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF625RFM https://www.encodeproject.org/files/ENCFF625RFM/@@download/ENCFF625RFM.bam ENCFF426ILM https://www.encodeproject.org/files/ENCFF426ILM/@@download/ENCFF426ILM.bam 126.9 M 0 112.0 M 0.883 PE 100 100 native 49.4 M 0.0 M 40.2 M 0.633 0.81 0.81 5.26 225 1.48 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e57d9c9-a68f-4ef2-9160-6ef47b2e1f8e/@@download/cross_correlation_plot/ENCFF202EJBENCFF914KKF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB743MHF michael-snyder:L-1954 "ENCFF202EJB,ENCFF914KKF" HiSeq 4000 2016-09-16T03:20:36.320001+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyxXj03692xk39gZV14K9Q ENCSR874AFU https://www.encodeproject.org/experiments/ENCSR874AFU transcription factor IKZF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF580EVG https://www.encodeproject.org/files/ENCFF580EVG/@@download/ENCFF580EVG.bam ENCFF491QSR https://www.encodeproject.org/files/ENCFF491QSR/@@download/ENCFF491QSR.bam 113.1 M 0 98.1 M 0.868 PE 100 100 native 42.9 M 0.0 M 35.3 M 0.625 0.82 0.82 5.54 230 1.13 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e26e574-a859-4048-8870-6edd393090a9/@@download/cross_correlation_plot/ENCFF970GQFENCFF592CBD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB190HWI michael-snyder:L-1955 "ENCFF592CBD,ENCFF970GQF" HiSeq 4000 2016-09-16T03:19:58.084772+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyxf8036945x1X1GjJQQ1G ENCSR680UQE https://www.encodeproject.org/experiments/ENCSR680UQE transcription factor IKZF2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF870YQK https://www.encodeproject.org/files/ENCFF870YQK/@@download/ENCFF870YQK.bam ENCFF263GBY https://www.encodeproject.org/files/ENCFF263GBY/@@download/ENCFF263GBY.bam 68.6 M 0 66.3 M 0.965 PE 100 100 native 29.0 M 0.0 M 24.2 M 0.706 0.84 0.83 5.91 215 1.29 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9624cb6-0071-4b43-ac4c-63f9c40aa500/@@download/cross_correlation_plot/ENCFF952VLJENCFF230ILN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB053EPL michael-snyder:L-2793 "ENCFF952VLJ,ENCFF230ILN" HiSeq 4000 2016-09-16T03:21:06.768458+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyPZ00369Bp4j9gvg75j2f ENCSR680UQE https://www.encodeproject.org/experiments/ENCSR680UQE transcription factor IKZF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF338NXC https://www.encodeproject.org/files/ENCFF338NXC/@@download/ENCFF338NXC.bam ENCFF253RNG https://www.encodeproject.org/files/ENCFF253RNG/@@download/ENCFF253RNG.bam 139.7 M 0 132.7 M 0.950 PE 100 100 native 57.8 M 0.0 M 41.6 M 0.596 0.72 0.71 3.36 220 1.09 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/beb4a2f8-927f-495b-8331-dceb0c8f6438/@@download/cross_correlation_plot/ENCFF697JWXENCFF367BMZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB439BRH michael-snyder:L-2794 "ENCFF697JWX,ENCFF367BMZ" HiSeq 4000 2016-09-16T03:23:58.231281+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyPgQ0369G2Yz4yQjpqfBQ ENCSR822AHX https://www.encodeproject.org/experiments/ENCSR822AHX transcription factor IKZF2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF125XMV https://www.encodeproject.org/files/ENCFF125XMV/@@download/ENCFF125XMV.bam ENCFF669BBE https://www.encodeproject.org/files/ENCFF669BBE/@@download/ENCFF669BBE.bam 90.7 M 0 88.0 M 0.970 PE 100 100 native 38.9 M 0.0 M 36.1 M 0.795 0.93 0.93 13.54 205 1.25 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6c715d1-eb7b-43f6-b0e4-d7ccf80e6826/@@download/cross_correlation_plot/ENCFF997CNGENCFF574HXK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB077FFN michael-snyder:L-2795 "ENCFF574HXK,ENCFF997CNG" HiSeq 4000 2016-09-16T03:19:22.742932+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyvjQ0369BP06Yb0qGVZP5 ENCSR822AHX https://www.encodeproject.org/experiments/ENCSR822AHX transcription factor IKZF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF673WGB https://www.encodeproject.org/files/ENCFF673WGB/@@download/ENCFF673WGB.bam ENCFF843IFG https://www.encodeproject.org/files/ENCFF843IFG/@@download/ENCFF843IFG.bam 300.7 M 0 286.6 M 0.953 PE 100 100 native 124.0 M 0.0 M 81.9 M 0.545 0.66 0.65 2.69 210 1.06 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/37a04f73-0146-44c0-9683-6e08074074f5/@@download/cross_correlation_plot/ENCFF364TACENCFF393WEP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB824DJX michael-snyder:L-2796 "ENCFF393WEP,ENCFF364TAC" HiSeq 4000 2016-09-16T03:33:44.224357+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyvv003696Pxzk584jfj73 ENCSR000DZX https://www.encodeproject.org/experiments/ENCSR000DZX transcription factor IRF3-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF519GVE https://www.encodeproject.org/files/ENCFF519GVE/@@download/ENCFF519GVE.bam ENCFF489KNC https://www.encodeproject.org/files/ENCFF489KNC/@@download/ENCFF489KNC.bam 24.4 M 0 21.6 M 0.884 SE 36 28 28 0.0 M 15.1 M 13.3 M 0.544 0.88 0.88 8.13 150 1.07 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b0d2e74-bfb2-4053-90e0-7ff312c39924/@@download/cross_correlation_plot/ENCFF000VXD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEU ENCFF000VXD Illumina Genome Analyzer 2017-01-05T21:29:16.841393+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bK00369J2YG2G5JGYVbP ENCSR000DZX https://www.encodeproject.org/experiments/ENCSR000DZX transcription factor IRF3-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF935OOR https://www.encodeproject.org/files/ENCFF935OOR/@@download/ENCFF935OOR.bam ENCFF465UKD https://www.encodeproject.org/files/ENCFF465UKD/@@download/ENCFF465UKD.bam 30.7 M 0 28.3 M 0.924 SE 36 28 28 0.0 M 19.6 M 18.7 M 0.609 0.95 0.95 20.70 90 1.02 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/583e9280-2355-4f59-8db3-a59c604f4600/@@download/cross_correlation_plot/ENCFF000VXI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHR ENCFF000VXI Illumina Genome Analyzer 2017-01-05T21:29:14.932832+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7bY003697J9fxG4f90kX9 ENCSR408JQO https://www.encodeproject.org/experiments/ENCSR408JQO transcription factor IRF3-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF844CVM https://www.encodeproject.org/files/ENCFF844CVM/@@download/ENCFF844CVM.bam ENCFF897PRV https://www.encodeproject.org/files/ENCFF897PRV/@@download/ENCFF897PRV.bam 66.6 M 0 65.2 M 0.979 PE 100 100 native 29.1 M 0.0 M 24.8 M 0.744 0.85 0.85 6.52 175 1.09 10.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0fa365d-aa3e-490a-9497-fef513b5e59c/@@download/cross_correlation_plot/ENCFF002EKKENCFF002EKO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB482QLA michael-snyder:831_B_truseq_CAGATC "ENCFF002EKO,ENCFF002EKK" HiSeq 2000 2016-10-09T17:08:18.548331+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6BxQ0jv1f60PxyZ9JGPfB ENCSR408JQO https://www.encodeproject.org/experiments/ENCSR408JQO transcription factor IRF3-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF541BNH https://www.encodeproject.org/files/ENCFF541BNH/@@download/ENCFF541BNH.bam ENCFF345DIP https://www.encodeproject.org/files/ENCFF345DIP/@@download/ENCFF345DIP.bam 66.6 M 0 65.2 M 0.979 PE 100 100 native 29.1 M 0.0 M 25.0 M 0.751 0.86 0.86 6.89 170 1.09 8.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/07ecd5a6-7177-4df5-9d79-c741ba6dac43/@@download/cross_correlation_plot/ENCFF002EKLENCFF002EKR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB745AQU michael-snyder:831_B_truseq_GATCAG "ENCFF002EKR,ENCFF002EKL" HiSeq 2000 2016-10-09T17:11:30.651419+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6BzQ0jv1QxJBfj5Zb2q8G ENCSR976TBC https://www.encodeproject.org/experiments/ENCSR976TBC transcription factor IRF5-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF988CYS https://www.encodeproject.org/files/ENCFF988CYS/@@download/ENCFF988CYS.bam ENCFF465OFG https://www.encodeproject.org/files/ENCFF465OFG/@@download/ENCFF465OFG.bam 50.9 M 0 49.5 M 0.973 PE 100 100 native 21.4 M 0.0 M 20.6 M 0.811 0.96 0.96 27.16 200 1.08 4.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/61be4edf-e198-4076-99cf-4e767f8ff6d4/@@download/cross_correlation_plot/ENCFF086HHPENCFF490CJS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB063FHW michael-snyder:L-2137 "ENCFF086HHP,ENCFF490CJS" HiSeq 2000 2016-10-09T17:03:14.439132+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BpQ0jv1QxJBfj5Zb2px5 ENCSR976TBC https://www.encodeproject.org/experiments/ENCSR976TBC transcription factor IRF5-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF345FES https://www.encodeproject.org/files/ENCFF345FES/@@download/ENCFF345FES.bam ENCFF380LIA https://www.encodeproject.org/files/ENCFF380LIA/@@download/ENCFF380LIA.bam 54.6 M 0 53.4 M 0.977 PE 100 100 native 23.3 M 0.0 M 22.4 M 0.821 0.96 0.96 26.61 190 1.10 3.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/94605e7b-b224-4576-b3f9-afe27bbe081d/@@download/cross_correlation_plot/ENCFF668ZNCENCFF365NAQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB265VHJ michael-snyder:L-2138 "ENCFF668ZNC,ENCFF365NAQ" HiSeq 2000 2016-10-09T17:03:04.818448+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Bv00jv1XvFGkBjjfjQXY ENCSR000DYS https://www.encodeproject.org/experiments/ENCSR000DYS transcription factor JUND-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF764KYI https://www.encodeproject.org/files/ENCFF764KYI/@@download/ENCFF764KYI.bam ENCFF491RPU https://www.encodeproject.org/files/ENCFF491RPU/@@download/ENCFF491RPU.bam 26.5 M 0 25.1 M 0.950 SE 36 36 native 0.0 M 18.8 M 18.3 M 0.690 0.97 0.97 35.82 90 1.05 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/a24f0233-dcaf-46be-a8a5-a8271a405ee6/@@download/cross_correlation_plot/ENCFF000VXA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADT ENCFF000VXA Illumina Genome Analyzer 2016-11-30T18:15:13.077728+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4Qjj0369PJ2Y31JVKQ8YF ENCSR000DYS https://www.encodeproject.org/experiments/ENCSR000DYS transcription factor JUND-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF411KDZ https://www.encodeproject.org/files/ENCFF411KDZ/@@download/ENCFF411KDZ.bam ENCFF055FUM https://www.encodeproject.org/files/ENCFF055FUM/@@download/ENCFF055FUM.bam 20.1 M 0 19.1 M 0.948 SE 36 36 native 0.0 M 14.7 M 11.6 M 0.574 0.79 0.78 4.21 120 1.15 2.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/46d0bd9e-cfdf-47b7-811b-6ea77d1c989a/@@download/cross_correlation_plot/ENCFF000VXC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADU ENCFF000VXC Illumina Genome Analyzer 2016-11-30T18:14:21.024478+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4Qpj0369052Y839VPkv9J ENCSR657PEW https://www.encodeproject.org/experiments/ENCSR657PEW RNA binding protein LARP7-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF961JEB https://www.encodeproject.org/files/ENCFF961JEB/@@download/ENCFF961JEB.bam ENCFF389EQM https://www.encodeproject.org/files/ENCFF389EQM/@@download/ENCFF389EQM.bam 119.4 M 0 94.6 M 0.792 PE 100 100 native 41.3 M 0.0 M 36.2 M 0.606 0.88 0.88 8.03 185 1.08 3.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/af0f6a5f-45df-429c-a6d3-ef88b89a53a3/@@download/cross_correlation_plot/ENCFF704JSZENCFF266USZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB247TJX michael-snyder:L-3422 "ENCFF266USZ,ENCFF704JSZ" HiSeq 4000 2017-05-05T12:23:14.198536+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvk803698bZvg2JGkJ6QQ ENCSR657PEW https://www.encodeproject.org/experiments/ENCSR657PEW RNA binding protein LARP7-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF611ELI https://www.encodeproject.org/files/ENCFF611ELI/@@download/ENCFF611ELI.bam ENCFF862GLL https://www.encodeproject.org/files/ENCFF862GLL/@@download/ENCFF862GLL.bam 101.3 M 0 84.8 M 0.837 PE 100 100 native 36.9 M 0.0 M 32.2 M 0.635 0.87 0.87 7.61 210 1.07 3.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/98ab0e6d-ca5b-4ce8-8a0b-9ff42eecbd3d/@@download/cross_correlation_plot/ENCFF897TLHENCFF352LST.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB258SZT michael-snyder:L-3423 "ENCFF352LST,ENCFF897TLH" HiSeq 4000 2017-05-05T11:02:38.392081+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvvQ0369KY6Jp7Gj1pfQ6 ENCSR000DYV https://www.encodeproject.org/experiments/ENCSR000DYV transcription factor MAFK-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF363SJZ https://www.encodeproject.org/files/ENCFF363SJZ/@@download/ENCFF363SJZ.bam ENCFF095XPE https://www.encodeproject.org/files/ENCFF095XPE/@@download/ENCFF095XPE.bam 30.3 M 0 29.7 M 0.982 SE 36 28 28 0.0 M 21.4 M 19.8 M 0.654 0.92 0.95 28.02 100 1.05 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/8581d822-7f3c-438e-a3b9-03a6d55d9934/@@download/cross_correlation_plot/ENCFF000VXQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASE ENCFF000VXQ Illumina Genome Analyzer 2016-10-28T23:03:04.921239+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042Py80jv1p2P23PQ3PgPj0 ENCSR000DYV https://www.encodeproject.org/experiments/ENCSR000DYV transcription factor MAFK-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF902JQQ https://www.encodeproject.org/files/ENCFF902JQQ/@@download/ENCFF902JQQ.bam ENCFF095XPE https://www.encodeproject.org/files/ENCFF095XPE/@@download/ENCFF095XPE.bam 30.3 M 0 29.6 M 0.979 SE 36 36 native 0.0 M 22.9 M 21.2 M 0.699 0.93 0.96 28.23 105 1.04 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/e89604a0-c347-4419-b34b-759822e58004/@@download/cross_correlation_plot/ENCFF000VXQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASE ENCFF000VXQ Illumina Genome Analyzer 2016-10-09T17:31:25.853528+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62480jv1z38xVGv104v5v ENCSR000DYV https://www.encodeproject.org/experiments/ENCSR000DYV transcription factor MAFK-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF116MDP https://www.encodeproject.org/files/ENCFF116MDP/@@download/ENCFF116MDP.bam ENCFF294YYR https://www.encodeproject.org/files/ENCFF294YYR/@@download/ENCFF294YYR.bam 27.9 M 0 27.2 M 0.974 SE 36 28 28 0.0 M 19.5 M 18.9 M 0.677 0.97 0.97 31.39 110 1.08 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7e57f0b-f74a-433c-9e41-697b002b4df0/@@download/cross_correlation_plot/ENCFF000VXS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQD ENCFF000VXS Illumina Genome Analyzer 2016-10-28T23:09:45.039334+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042Q000jv1XzXjp9j3FpKP9 ENCSR000DYV https://www.encodeproject.org/experiments/ENCSR000DYV transcription factor MAFK-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF528OSH https://www.encodeproject.org/files/ENCFF528OSH/@@download/ENCFF528OSH.bam ENCFF294YYR https://www.encodeproject.org/files/ENCFF294YYR/@@download/ENCFF294YYR.bam 27.9 M 0 27.0 M 0.969 SE 36 36 native 0.0 M 20.9 M 20.2 M 0.724 0.97 0.97 31.63 110 1.07 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a48178c-5511-4c54-81bb-c04d4243d4b9/@@download/cross_correlation_plot/ENCFF000VXS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQD ENCFF000VXS Illumina Genome Analyzer 2016-10-09T17:31:31.487375+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62600jv1q5825v91XY30V ENCSR000DZF https://www.encodeproject.org/experiments/ENCSR000DZF transcription factor MAX-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF158TTY https://www.encodeproject.org/files/ENCFF158TTY/@@download/ENCFF158TTY.bam ENCFF746EMY https://www.encodeproject.org/files/ENCFF746EMY/@@download/ENCFF746EMY.bam 25.7 M 0 25.1 M 0.975 SE 36 28 28 0.0 M 18.2 M 17.6 M 0.682 0.97 0.97 31.10 110 1.09 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c40bd01-aef4-45c4-bd2f-ef968320c754/@@download/cross_correlation_plot/ENCFF000VXY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALR ENCFF000VXY Illumina Genome Analyzer 2017-01-05T21:31:22.205787+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Xp00369PjBfKG4QzQvz0 ENCSR000DZF https://www.encodeproject.org/experiments/ENCSR000DZF transcription factor MAX-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF577KAH https://www.encodeproject.org/files/ENCFF577KAH/@@download/ENCFF577KAH.bam ENCFF076XQH https://www.encodeproject.org/files/ENCFF076XQH/@@download/ENCFF076XQH.bam 27.9 M 0 27.4 M 0.982 SE 36 28 28 0.0 M 19.6 M 18.7 M 0.670 0.96 0.98 58.50 95 1.06 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5104324-79d1-42be-8e7a-b379966889c6/@@download/cross_correlation_plot/ENCFF000VYA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AED ENCFF000VYA Illumina Genome Analyzer 2017-01-05T21:31:13.113580+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Xz803697FPkPG58gbpXg ENCSR000DZA https://www.encodeproject.org/experiments/ENCSR000DZA "RNA binding protein,transcription factor" MAZ-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF406RXQ https://www.encodeproject.org/files/ENCFF406RXQ/@@download/ENCFF406RXQ.bam ENCFF387JUO https://www.encodeproject.org/files/ENCFF387JUO/@@download/ENCFF387JUO.bam 30.9 M 0 28.8 M 0.934 SE 36 28 28 0.0 M 20.9 M 19.7 M 0.639 0.94 0.94 17.94 110 1.16 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9eafcdf-1211-4f92-8c5d-c83c066cb2ad/@@download/cross_correlation_plot/ENCFF000VYM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGC ENCFF000VYM Illumina Genome Analyzer 2017-01-05T21:26:08.299275+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7j300369J2YG2G5JGYVfj ENCSR000DZA https://www.encodeproject.org/experiments/ENCSR000DZA "RNA binding protein,transcription factor" MAZ-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF352KKZ https://www.encodeproject.org/files/ENCFF352KKZ/@@download/ENCFF352KKZ.bam ENCFF122OAU https://www.encodeproject.org/files/ENCFF122OAU/@@download/ENCFF122OAU.bam 30.4 M 0 30.0 M 0.986 SE 36 28 28 0.0 M 22.2 M 20.5 M 0.674 0.92 0.93 15.21 115 1.07 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d97ede8-58a7-40da-88e5-ccb8b2d3c968/@@download/cross_correlation_plot/ENCFF000VYO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGB ENCFF000VYO Illumina Genome Analyzer 2017-01-05T21:26:10.105386+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7j8Q03699GG65G542pjYG ENCSR552XSN https://www.encodeproject.org/experiments/ENCSR552XSN transcription factor MLLT1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF665BYT https://www.encodeproject.org/files/ENCFF665BYT/@@download/ENCFF665BYT.bam ENCFF204VIF https://www.encodeproject.org/files/ENCFF204VIF/@@download/ENCFF204VIF.bam 74.9 M 0 68.3 M 0.912 PE 100 100 native 30.2 M 0.0 M 27.6 M 0.736 0.92 0.92 11.72 210 1.17 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf554a68-6e24-441e-bfe7-10a195d89798/@@download/cross_correlation_plot/ENCFF021DVVENCFF804QYW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB448LQS michael-snyder:L-1956 "ENCFF804QYW,ENCFF021DVV" HiSeq 2000 2016-10-09T17:05:26.223487+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42kQ0jv1XYYX2Fxk3f4zZ ENCSR552XSN https://www.encodeproject.org/experiments/ENCSR552XSN transcription factor MLLT1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF982QKE https://www.encodeproject.org/files/ENCFF982QKE/@@download/ENCFF982QKE.bam ENCFF639QMC https://www.encodeproject.org/files/ENCFF639QMC/@@download/ENCFF639QMC.bam 67.5 M 0 61.8 M 0.915 PE 100 100 native 27.3 M 0.0 M 24.3 M 0.719 0.89 0.89 8.88 225 1.19 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ba23f0a-13c1-4f46-8100-57b3c4e30a9d/@@download/cross_correlation_plot/ENCFF203MXCENCFF454FRC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB783GOT michael-snyder:L-1957 "ENCFF454FRC,ENCFF203MXC" HiSeq 2000 2016-10-09T17:05:14.619388+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42q00jv1vY92b0GYjVFpk ENCSR000EAF https://www.encodeproject.org/experiments/ENCSR000EAF control mouse-IgG-control-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF710SMS https://www.encodeproject.org/files/ENCFF710SMS/@@download/ENCFF710SMS.bam ENCFF487SIK https://www.encodeproject.org/files/ENCFF487SIK/@@download/ENCFF487SIK.bam 6.2 M 0 5.9 M 0.948 SE 28 28 native 0.0 M 4.1 M 4.0 M 0.639 0.97 0.97 38.68 110 1.03 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/803026f8-4e28-4f10-a4d0-9f79f5266b11/@@download/cross_correlation_plot/ENCFF000VWD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APX ENCFF000VWD Illumina Genome Analyzer 2016-10-29T18:04:22.405822+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xy9j0jv1XYjZG215p2f77 ENCSR000EAF https://www.encodeproject.org/experiments/ENCSR000EAF control mouse-IgG-control-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF477ZKJ https://www.encodeproject.org/files/ENCFF477ZKJ/@@download/ENCFF477ZKJ.bam ENCFF364HXC https://www.encodeproject.org/files/ENCFF364HXC/@@download/ENCFF364HXC.bam 5.5 M 0 5.1 M 0.921 SE 28 28 native 0.0 M 3.6 M 3.5 M 0.625 0.97 0.97 36.48 90 1.03 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/6137e285-cff0-4efb-9d38-12c1cd3e900c/@@download/cross_correlation_plot/ENCFF000VWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOZ ENCFF000VWK Illumina Genome Analyzer 2016-10-29T18:02:38.289498+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xyG00jv1jJBzYyJKPbJGZ ENCSR293QAR https://www.encodeproject.org/experiments/ENCSR293QAR transcription factor MTA2-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF178EBR https://www.encodeproject.org/files/ENCFF178EBR/@@download/ENCFF178EBR.bam ENCFF029UNK https://www.encodeproject.org/files/ENCFF029UNK/@@download/ENCFF029UNK.bam 216.9 M 0 195.7 M 0.902 PE 100 100 native 86.2 M 0.0 M 58.6 M 0.541 0.68 0.68 3.02 220 1.16 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/b107df20-4491-4a37-894a-30d3362b7b64/@@download/cross_correlation_plot/ENCFF079AYEENCFF649MUT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB130QBB michael-snyder:L-1958 "ENCFF079AYE,ENCFF649MUT" HiSeq 4000 2016-09-16T03:27:57.992344+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyYGQ0369JP9931xpgPYz6 ENCSR293QAR https://www.encodeproject.org/experiments/ENCSR293QAR transcription factor MTA2-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF888AIA https://www.encodeproject.org/files/ENCFF888AIA/@@download/ENCFF888AIA.bam ENCFF652NWL https://www.encodeproject.org/files/ENCFF652NWL/@@download/ENCFF652NWL.bam 42.7 M 0 36.0 M 0.842 PE 100 100 native 15.7 M 0.0 M 13.2 M 0.619 0.84 0.84 6.29 220 1.35 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/8c913e23-28fc-4ac8-844e-c5a7e0bd632b/@@download/cross_correlation_plot/ENCFF271TDTENCFF973RUL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB796OOU michael-snyder:L-1959 "ENCFF271TDT,ENCFF973RUL" HiSeq 4000 2016-09-16T03:18:03.481990+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyYP80369GZQjPPJb6P0b8 ENCSR000DZI https://www.encodeproject.org/experiments/ENCSR000DZI transcription factor MXI1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF377YXP https://www.encodeproject.org/files/ENCFF377YXP/@@download/ENCFF377YXP.bam ENCFF056TXR https://www.encodeproject.org/files/ENCFF056TXR/@@download/ENCFF056TXR.bam 23.2 M 0 22.9 M 0.985 SE 36 28 28 0.0 M 16.3 M 15.9 M 0.685 0.97 0.97 39.43 120 1.11 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/d81b47b2-0ac6-43e8-a1e4-06276bfe01e4/@@download/cross_correlation_plot/ENCFF000VYT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB186MSV michael-snyder:Mxi1_AF4185_GM12878_Rep1 ENCFF000VYT Illumina Genome Analyzer IIx 2017-01-05T21:31:21.402857+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Z9j0369PjBfKG4QzQx03 ENCSR000DZI https://www.encodeproject.org/experiments/ENCSR000DZI transcription factor MXI1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF169JOK https://www.encodeproject.org/files/ENCFF169JOK/@@download/ENCFF169JOK.bam ENCFF707VJV https://www.encodeproject.org/files/ENCFF707VJV/@@download/ENCFF707VJV.bam 39.4 M 0 36.5 M 0.925 SE 36 28 28 0.0 M 27.1 M 23.3 M 0.592 0.86 0.86 6.90 115 1.11 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/0df9e245-8be8-45ec-aad9-29d43088db62/@@download/cross_correlation_plot/ENCFF000VYV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB004FDC michael-snyder:Mxi1_AF4185_GM12878_Rep3-MORE READS ENCFF000VYV Illumina Genome Analyzer IIx 2017-01-05T21:31:38.105336+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7ZP003697FPkPG58gbpY8 ENCSR819ATC https://www.encodeproject.org/experiments/ENCSR819ATC transcription factor MYB-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF110LOM https://www.encodeproject.org/files/ENCFF110LOM/@@download/ENCFF110LOM.bam ENCFF136YJS https://www.encodeproject.org/files/ENCFF136YJS/@@download/ENCFF136YJS.bam 24.9 M 0 24.1 M 0.969 SE 36 36 native 0.0 M 18.5 M 17.7 M 0.708 0.96 0.96 22.57 120 1.03 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/9faea89f-7997-4b2c-ba3c-ac490d227b34/@@download/cross_correlation_plot/ENCFF002ECX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB346YYW michael-snyder:c-Myb_sc7874_GM12878_Rep1 ENCFF002ECX Illumina Genome Analyzer IIx 2016-10-09T17:00:02.032374+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Xj80jv1g5yGjfvVx0PJ4 ENCSR819ATC https://www.encodeproject.org/experiments/ENCSR819ATC transcription factor MYB-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF809AHN https://www.encodeproject.org/files/ENCFF809AHN/@@download/ENCFF809AHN.bam ENCFF295HEG https://www.encodeproject.org/files/ENCFF295HEG/@@download/ENCFF295HEG.bam 22.7 M 0 19.3 M 0.851 SE 36 36 native 0.0 M 15.1 M 13.2 M 0.584 0.88 0.88 7.79 125 1.05 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/2dcf28d7-b1e5-4826-b423-0b296ece0ffa/@@download/cross_correlation_plot/ENCFF002EBS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB891MQA michael-snyder:c-Myb_sc7874_GM12878_Rep3 ENCFF002EBS Illumina Genome Analyzer IIx 2016-10-09T16:59:42.919080+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XkQ0jv1f60PxyZ9JGPVz ENCSR278SQL https://www.encodeproject.org/experiments/ENCSR278SQL transcription factor NBN-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF722EAP https://www.encodeproject.org/files/ENCFF722EAP/@@download/ENCFF722EAP.bam ENCFF727ATN https://www.encodeproject.org/files/ENCFF727ATN/@@download/ENCFF727ATN.bam 80.9 M 0 75.6 M 0.934 PE 100 100 native 32.9 M 0.0 M 31.4 M 0.775 0.96 0.96 22.57 200 1.09 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f632a06-b795-48ab-9b4e-cc23c686f975/@@download/cross_correlation_plot/ENCFF485UKVENCFF881QTR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB654DNL michael-snyder:L-1960 "ENCFF485UKV,ENCFF881QTR" HiSeq 2000 2016-10-09T17:30:49.777589+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66z80jv1QZp37BGvK2BP2 ENCSR278SQL https://www.encodeproject.org/experiments/ENCSR278SQL transcription factor NBN-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF382USC https://www.encodeproject.org/files/ENCFF382USC/@@download/ENCFF382USC.bam ENCFF384CXB https://www.encodeproject.org/files/ENCFF384CXB/@@download/ENCFF384CXB.bam 65.1 M 0 59.5 M 0.914 PE 100 100 native 25.9 M 0.0 M 24.4 M 0.749 0.94 0.94 17.21 210 1.11 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4711c4b-582f-4d9a-bd2b-08828ebfe460/@@download/cross_correlation_plot/ENCFF724KPMENCFF863GNT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB355YET michael-snyder:L-1961 "ENCFF863GNT,ENCFF724KPM" HiSeq 2000 2016-10-09T17:30:25.244199+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67380jv1xFKXGVbpg0QG4 ENCSR000DZY https://www.encodeproject.org/experiments/ENCSR000DZY transcription factor NFE2-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF952AWV https://www.encodeproject.org/files/ENCFF952AWV/@@download/ENCFF952AWV.bam ENCFF851SSC https://www.encodeproject.org/files/ENCFF851SSC/@@download/ENCFF851SSC.bam 21.3 M 0 18.4 M 0.863 SE 36 28 28 0.0 M 12.8 M 12.6 M 0.592 0.99 0.99 147.49 115 1.04 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/75e14e6e-9d24-40cd-9ee4-81665568dd9a/@@download/cross_correlation_plot/ENCFF000VZL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUE ENCFF000VZL Illumina Genome Analyzer 2017-01-05T21:18:37.003683+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g817003697J9fxG4f90kgg ENCSR000DZY https://www.encodeproject.org/experiments/ENCSR000DZY transcription factor NFE2-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF254WNB https://www.encodeproject.org/files/ENCFF254WNB/@@download/ENCFF254WNB.bam ENCFF553YRB https://www.encodeproject.org/files/ENCFF553YRB/@@download/ENCFF553YRB.bam 24.7 M 0 17.9 M 0.723 SE 36 28 28 0.0 M 12.5 M 11.3 M 0.455 0.90 0.90 10.12 110 1.07 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/d163ae4c-a160-4b4d-be6b-e5cb4b2b3d5d/@@download/cross_correlation_plot/ENCFF000VZK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGV ENCFF000VZK Illumina Genome Analyzer 2017-01-05T21:18:35.839677+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g81Fj0369Pyf0JG49f337q ENCSR746XEG https://www.encodeproject.org/experiments/ENCSR746XEG transcription factor NFXL1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF622GDZ https://www.encodeproject.org/files/ENCFF622GDZ/@@download/ENCFF622GDZ.bam ENCFF906JCA https://www.encodeproject.org/files/ENCFF906JCA/@@download/ENCFF906JCA.bam 88.8 M 0 87.0 M 0.980 PE 100 100 native 38.4 M 0.0 M 33.4 M 0.752 0.87 0.87 7.45 155 1.06 5.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f8bcde4-f191-4dc9-9535-18fd042562ad/@@download/cross_correlation_plot/ENCFF377QZDENCFF639NST.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB303WOX michael-snyder:L-3428 "ENCFF639NST,ENCFF377QZD" HiSeq 4000 2017-05-05T11:29:18.452050+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yv9j03699xk39703jJkfP ENCSR746XEG https://www.encodeproject.org/experiments/ENCSR746XEG transcription factor NFXL1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF673BXM https://www.encodeproject.org/files/ENCFF673BXM/@@download/ENCFF673BXM.bam ENCFF283EIU https://www.encodeproject.org/files/ENCFF283EIU/@@download/ENCFF283EIU.bam 84.5 M 0 83.2 M 0.984 PE 100 100 native 36.6 M 0.0 M 30.9 M 0.731 0.84 0.84 6.20 170 1.07 7.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/477bbaee-c551-46f6-ad44-65423fa6a3e9/@@download/cross_correlation_plot/ENCFF571OVIENCFF370YRD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB085BBJ michael-snyder:L-3429 "ENCFF571OVI,ENCFF370YRD" HiSeq 4000 2017-05-05T10:45:53.258690+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvJ803692Z7YP70b61zxX ENCSR732PJX https://www.encodeproject.org/experiments/ENCSR732PJX RNA binding protein NKRF-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF422FDA https://www.encodeproject.org/files/ENCFF422FDA/@@download/ENCFF422FDA.bam ENCFF122KEM https://www.encodeproject.org/files/ENCFF122KEM/@@download/ENCFF122KEM.bam 84.6 M 0 66.5 M 0.786 PE 100 100 native 29.6 M 0.0 M 25.9 M 0.613 0.88 0.87 7.87 170 1.10 3.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/101f26c9-ae5a-4385-915b-531e9013f10f/@@download/cross_correlation_plot/ENCFF877IEWENCFF188COD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB535PNP michael-snyder:L-3468 "ENCFF877IEW,ENCFF188COD" HiSeq 4000 2017-05-05T22:08:33.757069+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vy8036911Q6zKVv508zz ENCSR732PJX https://www.encodeproject.org/experiments/ENCSR732PJX RNA binding protein NKRF-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF244EFU https://www.encodeproject.org/files/ENCFF244EFU/@@download/ENCFF244EFU.bam ENCFF202RJK https://www.encodeproject.org/files/ENCFF202RJK/@@download/ENCFF202RJK.bam 90.5 M 0 74.0 M 0.818 PE 100 100 native 32.9 M 0.0 M 26.3 M 0.582 0.80 0.79 4.72 170 1.10 2.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c295e92-0671-4ec7-91da-50844460609c/@@download/cross_correlation_plot/ENCFF369GUTENCFF530QYJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB533DWH michael-snyder:L-3469 "ENCFF530QYJ,ENCFF369GUT" HiSeq 4000 2017-05-05T22:21:08.947102+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469x1j03699xk39703jJy78 ENCSR784VIQ https://www.encodeproject.org/experiments/ENCSR784VIQ transcription factor NR2C1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF785FLS https://www.encodeproject.org/files/ENCFF785FLS/@@download/ENCFF785FLS.bam ENCFF537UPI https://www.encodeproject.org/files/ENCFF537UPI/@@download/ENCFF537UPI.bam 99.1 M 0 96.5 M 0.973 PE 100 100 native 43.4 M 0.0 M 25.5 M 0.515 0.59 0.56 2.12 165 1.30 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/6547c463-d518-4646-aa42-afa6330f1021/@@download/cross_correlation_plot/ENCFF017QRMENCFF805JBH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB171USF michael-snyder:L-3452 "ENCFF805JBH,ENCFF017QRM" HiSeq 4000 2017-06-06T18:28:30.476834+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3PYQ036903BzqG23ZKYf6 ENCSR784VIQ https://www.encodeproject.org/experiments/ENCSR784VIQ transcription factor NR2C1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF236GOA https://www.encodeproject.org/files/ENCFF236GOA/@@download/ENCFF236GOA.bam ENCFF812WOT https://www.encodeproject.org/files/ENCFF812WOT/@@download/ENCFF812WOT.bam 99.9 M 0 95.6 M 0.957 PE 100 100 native 43.0 M 0.0 M 26.4 M 0.529 0.61 0.59 2.30 170 1.23 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/814b1138-21b1-4e41-817e-2069f06d6de2/@@download/cross_correlation_plot/ENCFF194BDTENCFF209IJT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB353KNE michael-snyder:L-3453 "ENCFF194BDT,ENCFF209IJT" HiSeq 4000 2017-06-06T18:24:17.076752+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Pf803691fF9gG2bvby7f ENCSR514VYD https://www.encodeproject.org/experiments/ENCSR514VYD transcription factor NR2F1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF320FKI https://www.encodeproject.org/files/ENCFF320FKI/@@download/ENCFF320FKI.bam ENCFF145YKB https://www.encodeproject.org/files/ENCFF145YKB/@@download/ENCFF145YKB.bam 98.3 M 0 79.3 M 0.807 PE 100 100 native 35.3 M 0.0 M 28.3 M 0.575 0.80 0.80 4.85 185 1.20 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e48714c-8467-49dd-8e7a-5902e9a2573e/@@download/cross_correlation_plot/ENCFF340SQPENCFF587OVW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB684CZX michael-snyder:L-3362 "ENCFF340SQP,ENCFF587OVW" HiSeq 4000 2017-04-09T00:00:47.923684+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05x8036975Q0F07J1K9z2 ENCSR514VYD https://www.encodeproject.org/experiments/ENCSR514VYD transcription factor NR2F1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF282GMA https://www.encodeproject.org/files/ENCFF282GMA/@@download/ENCFF282GMA.bam ENCFF790VVG https://www.encodeproject.org/files/ENCFF790VVG/@@download/ENCFF790VVG.bam 63.8 M 0 56.5 M 0.886 PE 100 100 native 24.7 M 0.0 M 21.3 M 0.667 0.86 0.86 7.06 185 1.24 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/43d41354-db9f-4235-a7ad-b5fcc7e73e9b/@@download/cross_correlation_plot/ENCFF264WMAENCFF155GMC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB066TOE michael-snyder:L-3363 "ENCFF264WMA,ENCFF155GMC" HiSeq 4000 2017-04-08T23:58:55.464825+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z061Q0369GKX6y4xkVB5vp ENCSR000DZO https://www.encodeproject.org/experiments/ENCSR000DZO transcription factor NRF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF910PTH https://www.encodeproject.org/files/ENCFF910PTH/@@download/ENCFF910PTH.bam ENCFF752ACP https://www.encodeproject.org/files/ENCFF752ACP/@@download/ENCFF752ACP.bam 19.9 M 0 16.7 M 0.840 SE 36 28 28 0.0 M 11.9 M 10.6 M 0.535 0.89 0.90 9.67 80 1.32 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5bf3505-3acb-41c2-a98d-74f4b7e3e91c/@@download/cross_correlation_plot/ENCFF000WAZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOX ENCFF000WAZ Illumina Genome Analyzer 2017-01-05T21:30:57.879265+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7YgQ0369Kbx0VG4x73zzp ENCSR000DZO https://www.encodeproject.org/experiments/ENCSR000DZO transcription factor NRF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF486EWS https://www.encodeproject.org/files/ENCFF486EWS/@@download/ENCFF486EWS.bam ENCFF072DOQ https://www.encodeproject.org/files/ENCFF072DOQ/@@download/ENCFF072DOQ.bam 43.1 M 0 37.2 M 0.862 SE 36 28 28 0.0 M 25.7 M 24.2 M 0.561 0.94 0.94 17.97 100 1.10 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/6918b3f6-81c6-440f-9b0a-1cccb9aa01ec/@@download/cross_correlation_plot/ENCFF000WBG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVR ENCFF000WBG Illumina Genome Analyzer 2017-01-05T21:31:44.612829+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Yvj0369PjBfKG4QzQvzQ ENCSR711XNY https://www.encodeproject.org/experiments/ENCSR711XNY transcription factor PKNOX1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF603RWK https://www.encodeproject.org/files/ENCFF603RWK/@@download/ENCFF603RWK.bam ENCFF558VPD https://www.encodeproject.org/files/ENCFF558VPD/@@download/ENCFF558VPD.bam 73.1 M 0 71.1 M 0.973 PE 100 100 native 30.6 M 0.0 M 27.3 M 0.747 0.89 0.89 9.41 215 2.02 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b3c16eb-a9e2-4270-9860-7c4765f4c415/@@download/cross_correlation_plot/ENCFF258XJKENCFF172ORI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB176NNI michael-snyder:L-3020 "ENCFF258XJK,ENCFF172ORI" HiSeq 2000 2016-10-27T22:27:30.351568+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bv100369BX1xqb1B80vYb ENCSR711XNY https://www.encodeproject.org/experiments/ENCSR711XNY transcription factor PKNOX1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF700PHB https://www.encodeproject.org/files/ENCFF700PHB/@@download/ENCFF700PHB.bam ENCFF479JEE https://www.encodeproject.org/files/ENCFF479JEE/@@download/ENCFF479JEE.bam 55.5 M 0 53.3 M 0.961 PE 100 100 native 22.9 M 0.0 M 20.9 M 0.753 0.91 0.91 11.32 210 1.68 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/14e36fcb-ec69-4809-b5bf-dab61a24971f/@@download/cross_correlation_plot/ENCFF914JSKENCFF394TEH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB866WMT michael-snyder:L-3021 "ENCFF914JSK,ENCFF394TEH" HiSeq 2000 2016-10-27T22:26:51.960139+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bv48036923z1QYVBPp84B ENCSR000EAD https://www.encodeproject.org/experiments/ENCSR000EAD transcription factor POLR2A-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF470BUO https://www.encodeproject.org/files/ENCFF470BUO/@@download/ENCFF470BUO.bam ENCFF642HWN https://www.encodeproject.org/files/ENCFF642HWN/@@download/ENCFF642HWN.bam 6.0 M 0 5.8 M 0.967 SE 28 28 28 0.0 M 4.3 M 4.2 M 0.696 0.96 0.97 35.64 80 2.59 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/f25baaf1-5338-4897-ae0b-1005b2e89011/@@download/cross_correlation_plot/ENCFF000WBQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABY ENCFF000WBQ Illumina Genome Analyzer 2017-01-05T21:31:03.739190+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7PvQ03697FPkPG58gbpPj ENCSR000EAD https://www.encodeproject.org/experiments/ENCSR000EAD transcription factor POLR2A-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF371KKF https://www.encodeproject.org/files/ENCFF371KKF/@@download/ENCFF371KKF.bam ENCFF356JRA https://www.encodeproject.org/files/ENCFF356JRA/@@download/ENCFF356JRA.bam 6.3 M 0 6.1 M 0.967 SE 28 28 28 0.0 M 4.4 M 4.4 M 0.689 0.98 0.98 61.31 80 1.94 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/69455c86-15ba-4a57-b857-3450fd474724/@@download/cross_correlation_plot/ENCFF000WBS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABW ENCFF000WBS Illumina Genome Analyzer 2017-01-05T21:31:09.379800+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Q5803697FPkPG58gbpQ0 ENCSR000EAD https://www.encodeproject.org/experiments/ENCSR000EAD transcription factor POLR2A-human GM12878 immortalized cell line 3 michael-snyder ENCODE2 GRCh38 ENCFF010ZDG https://www.encodeproject.org/files/ENCFF010ZDG/@@download/ENCFF010ZDG.bam ENCFF065JMN https://www.encodeproject.org/files/ENCFF065JMN/@@download/ENCFF065JMN.bam 5.7 M 0 5.5 M 0.964 SE 28 28 28 0.0 M 4.0 M 3.9 M 0.694 0.98 0.98 60.91 85 1.99 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe4372dd-5495-4339-a0ef-597c04878465/@@download/cross_correlation_plot/ENCFF000WBT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABX ENCFF000WBT Illumina Genome Analyzer 2017-01-05T21:31:09.094311+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7QK00369J2YG2G5JGYVXk ENCSR000EAD https://www.encodeproject.org/experiments/ENCSR000EAD transcription factor POLR2A-human GM12878 immortalized cell line 4 michael-snyder ENCODE2 GRCh38 ENCFF006BFG https://www.encodeproject.org/files/ENCFF006BFG/@@download/ENCFF006BFG.bam ENCFF709IJX https://www.encodeproject.org/files/ENCFF709IJX/@@download/ENCFF709IJX.bam 7.3 M 0 7.1 M 0.973 SE 28 28 28 0.0 M 5.3 M 5.2 M 0.712 0.97 0.98 47.22 95 1.83 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/2682439b-b582-42fc-ac6f-a5ba5ec00055/@@download/cross_correlation_plot/ENCFF000WBV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACB ENCFF000WBV Illumina Genome Analyzer 2017-01-05T21:31:13.403448+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Qbj0369Kbx0VG4x73zv6 ENCSR000EAD https://www.encodeproject.org/experiments/ENCSR000EAD transcription factor POLR2A-human GM12878 immortalized cell line 5 michael-snyder ENCODE2 GRCh38 ENCFF794PVC https://www.encodeproject.org/files/ENCFF794PVC/@@download/ENCFF794PVC.bam ENCFF094FXI https://www.encodeproject.org/files/ENCFF094FXI/@@download/ENCFF094FXI.bam 20.0 M 0 15.8 M 0.792 SE 34 28 28 0.0 M 10.8 M 10.2 M 0.511 0.94 0.96 26.72 110 1.83 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef494877-dd98-47ad-a327-ce69390655de/@@download/cross_correlation_plot/ENCFF000WCC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADI ENCFF000WCC Illumina Genome Analyzer 2017-01-05T21:31:34.614955+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Qyj03697J9fxG4f90kFP ENCSR000DZK https://www.encodeproject.org/experiments/ENCSR000DZK "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF634VSH https://www.encodeproject.org/files/ENCFF634VSH/@@download/ENCFF634VSH.bam ENCFF486RNZ https://www.encodeproject.org/files/ENCFF486RNZ/@@download/ENCFF486RNZ.bam 20.0 M 0 19.0 M 0.948 SE 36 28 28 0.0 M 13.4 M 13.1 M 0.653 0.98 0.98 47.69 90 1.19 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c6bd615-84e5-4f98-a5b8-129a65f8d1c7/@@download/cross_correlation_plot/ENCFF000WCS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APC ENCFF000WCS Illumina Genome Analyzer 2017-01-05T21:28:31.588721+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7fkj0369J2YG2G5JGYVfB ENCSR000DZK https://www.encodeproject.org/experiments/ENCSR000DZK "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF048NRD https://www.encodeproject.org/files/ENCFF048NRD/@@download/ENCFF048NRD.bam ENCFF546LAR https://www.encodeproject.org/files/ENCFF546LAR/@@download/ENCFF546LAR.bam 25.5 M 0 22.0 M 0.860 SE 36 28 28 0.0 M 15.6 M 11.1 M 0.436 0.71 0.70 3.10 125 1.15 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fa49356-99f3-4a23-a3b7-2976153b162a/@@download/cross_correlation_plot/ENCFF000WCR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APF ENCFF000WCR Illumina Genome Analyzer 2017-01-05T21:28:36.266608+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7fyj03697J9fxG4f90kXx ENCSR000DZH https://www.encodeproject.org/experiments/ENCSR000DZH control rabbit-IgG-control-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF334OIC https://www.encodeproject.org/files/ENCFF334OIC/@@download/ENCFF334OIC.bam ENCFF072AVQ https://www.encodeproject.org/files/ENCFF072AVQ/@@download/ENCFF072AVQ.bam 27.4 M 0 22.3 M 0.812 SE 27 27 native 0.0 M 14.6 M 14.3 M 0.521 0.98 0.98 46.27 120 1.02 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b87a0f5-4bc3-4feb-8954-ae3af11b5436/@@download/cross_correlation_plot/ENCFF000VXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHA ENCFF000VXH Illumina Genome Analyzer 2016-10-26T17:38:35.462931+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Bfj03692g2Q4k5K0j8zK ENCSR000DZH https://www.encodeproject.org/experiments/ENCSR000DZH control rabbit-IgG-control-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF499CGA https://www.encodeproject.org/files/ENCFF499CGA/@@download/ENCFF499CGA.bam ENCFF730TWO https://www.encodeproject.org/files/ENCFF730TWO/@@download/ENCFF730TWO.bam 18.3 M 0 13.7 M 0.748 SE 27 27 native 0.0 M 9.4 M 8.8 M 0.479 0.94 0.94 17.64 145 1.03 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/71ef6d7b-a8ca-4855-b138-9f51aafb2efc/@@download/cross_correlation_plot/ENCFF000VXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGZ ENCFF000VXG Illumina Genome Analyzer 2016-10-26T17:37:34.956766+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Bqj0369JgG4ppJK6p71V ENCSR000EAB https://www.encodeproject.org/experiments/ENCSR000EAB control rabbit-IgG-control-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF813LMQ https://www.encodeproject.org/files/ENCFF813LMQ/@@download/ENCFF813LMQ.bam ENCFF590RJM https://www.encodeproject.org/files/ENCFF590RJM/@@download/ENCFF590RJM.bam 17.8 M 0 17.4 M 0.980 SE 36 28 28 0.0 M 12.4 M 12.1 M 0.682 0.98 0.98 54.70 125 1.02 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/959291e1-1cc2-47e4-8de8-537995ab25db/@@download/cross_correlation_plot/ENCFF000VWF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHM ENCFF000VWF Illumina Genome Analyzer 2017-07-12T17:00:32.800808+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5Y44gj03691Gq2X2ZyB1PBY ENCSR000EAB https://www.encodeproject.org/experiments/ENCSR000EAB control rabbit-IgG-control-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF579QDW https://www.encodeproject.org/files/ENCFF579QDW/@@download/ENCFF579QDW.bam ENCFF590RJM https://www.encodeproject.org/files/ENCFF590RJM/@@download/ENCFF590RJM.bam 17.8 M 0 17.3 M 0.972 SE 36 36 native 0.0 M 13.1 M 12.9 M 0.725 0.98 0.98 54.98 130 1.02 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/a674de4c-17be-4241-8f27-4aed58f690a3/@@download/cross_correlation_plot/ENCFF000VWF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHM ENCFF000VWF Illumina Genome Analyzer 2016-10-26T17:36:44.305079+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082fB003692404175P5Q720 ENCSR000EAB https://www.encodeproject.org/experiments/ENCSR000EAB control rabbit-IgG-control-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF824NQO https://www.encodeproject.org/files/ENCFF824NQO/@@download/ENCFF824NQO.bam ENCFF180OXX https://www.encodeproject.org/files/ENCFF180OXX/@@download/ENCFF180OXX.bam 11.0 M 0 10.4 M 0.940 SE 36 28 28 0.0 M 7.7 M 7.3 M 0.661 0.95 0.95 21.29 155 1.03 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/433548da-4d4f-4d53-907b-d5a895f48b88/@@download/cross_correlation_plot/ENCFF000VWH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB596MBK ENCFF000VWH Illumina Genome Analyzer 2017-07-12T16:45:31.135738+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5Y44q003691Gq2X2ZyB1PBq ENCSR000EAB https://www.encodeproject.org/experiments/ENCSR000EAB control rabbit-IgG-control-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF450WED https://www.encodeproject.org/files/ENCFF450WED/@@download/ENCFF450WED.bam ENCFF180OXX https://www.encodeproject.org/files/ENCFF180OXX/@@download/ENCFF180OXX.bam 11.0 M 0 10.3 M 0.934 SE 36 36 native 0.0 M 8.1 M 7.7 M 0.701 0.95 0.95 21.45 150 1.03 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d6aa01c-3fe7-43a6-a026-2128f634f95b/@@download/cross_correlation_plot/ENCFF000VWH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB596MBK ENCFF000VWH Illumina Genome Analyzer 2016-10-26T17:36:28.302263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082fKQ0369BgF5f15PFF2bb ENCSR000EAC https://www.encodeproject.org/experiments/ENCSR000EAC transcription factor RAD21-human GM12878 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR482TWQ https://www.encodeproject.org/experiments/ENCSR482TWQ transcription factor RAD51-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF855SJQ https://www.encodeproject.org/files/ENCFF855SJQ/@@download/ENCFF855SJQ.bam ENCFF295PNK https://www.encodeproject.org/files/ENCFF295PNK/@@download/ENCFF295PNK.bam 94.0 M 0 84.8 M 0.902 PE 100 100 native 38.2 M 0.0 M 20.4 M 0.435 0.54 0.55 2.24 220 1.19 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/fafde037-120c-4b7d-b5de-9d3c99aace92/@@download/cross_correlation_plot/ENCFF758PBWENCFF393JDU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB500DUK michael-snyder:L-1972 "ENCFF758PBW,ENCFF393JDU" HiSeq 4000 2016-10-27T22:21:29.516553+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bkQQ03697KPkyX9BPQF41 ENCSR482TWQ https://www.encodeproject.org/experiments/ENCSR482TWQ transcription factor RAD51-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF550TMJ https://www.encodeproject.org/files/ENCFF550TMJ/@@download/ENCFF550TMJ.bam ENCFF685SRU https://www.encodeproject.org/files/ENCFF685SRU/@@download/ENCFF685SRU.bam 163.4 M 0 152.3 M 0.932 PE 100 100 native 68.6 M 0.0 M 41.6 M 0.509 0.61 0.60 2.41 220 1.18 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fe2cb2d-0c06-41ac-a23b-59359e32196f/@@download/cross_correlation_plot/ENCFF219PKKENCFF522PJZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB269SHK michael-snyder:L-1977 "ENCFF522PJZ,ENCFF219PKK" HiSeq 4000 2016-10-27T22:26:19.531026+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bkZ00369GJ6xQfbB7F5y2 ENCSR785OKZ https://www.encodeproject.org/experiments/ENCSR785OKZ transcription factor RB1-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF948HZE https://www.encodeproject.org/files/ENCFF948HZE/@@download/ENCFF948HZE.bam ENCFF783MVK https://www.encodeproject.org/files/ENCFF783MVK/@@download/ENCFF783MVK.bam 69.3 M 0 65.7 M 0.949 PE 100 100 native 29.7 M 0.0 M 26.1 M 0.754 0.88 0.88 8.11 220 1.08 11.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/3fc94e24-0ce8-4f50-b15d-886490e0515b/@@download/cross_correlation_plot/ENCFF002ELCENCFF002EKY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB524SVT michael-snyder:795_A_TruSeq_TGACCA "ENCFF002ELC,ENCFF002EKY" HiSeq 2000 2017-03-03T17:55:55.638795+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKjx8036937jVXBbKyY3qP ENCSR785OKZ https://www.encodeproject.org/experiments/ENCSR785OKZ transcription factor RB1-human GM12878 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF888KPM https://www.encodeproject.org/files/ENCFF888KPM/@@download/ENCFF888KPM.bam ENCFF264CPI https://www.encodeproject.org/files/ENCFF264CPI/@@download/ENCFF264CPI.bam 97.2 M 0 95.5 M 0.982 PE 101 101 native 43.6 M 0.0 M 36.7 M 0.755 0.84 0.84 6.09 180 1.09 3.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/66f47929-f88b-4553-b29f-8155d0550e16/@@download/cross_correlation_plot/ENCFF212KHQENCFF441MWI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB369DMO "ENCFF212KHQ,ENCFF441MWI" HiSeq 2000 2017-03-03T17:59:25.511821+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKk2Q0369G4KF414JkBvYZ ENCSR000DZC https://www.encodeproject.org/experiments/ENCSR000DZC transcription factor RCOR1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF065YOX https://www.encodeproject.org/files/ENCFF065YOX/@@download/ENCFF065YOX.bam ENCFF415AGV https://www.encodeproject.org/files/ENCFF415AGV/@@download/ENCFF415AGV.bam 26.7 M 0 25.2 M 0.943 SE 36 28 28 0.0 M 18.0 M 17.2 M 0.643 0.96 0.96 23.52 120 1.05 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/13c760d9-3a93-4bc3-8de6-d6517fdb34e6/@@download/cross_correlation_plot/ENCFF000VTW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVQ ENCFF000VTW Illumina Genome Analyzer 2017-01-05T21:26:15.827330+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7jK00369Pyf0JG49f3344 ENCSR000DZC https://www.encodeproject.org/experiments/ENCSR000DZC transcription factor RCOR1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF803YAB https://www.encodeproject.org/files/ENCFF803YAB/@@download/ENCFF803YAB.bam ENCFF347CFP https://www.encodeproject.org/files/ENCFF347CFP/@@download/ENCFF347CFP.bam 18.8 M 0 17.9 M 0.951 SE 36 28 28 0.0 M 12.9 M 12.6 M 0.669 0.98 0.98 49.80 100 1.05 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e8a401d-4d39-4dc9-8862-f76d4c08ef0e/@@download/cross_correlation_plot/ENCFF000VTY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVW ENCFF000VTY Illumina Genome Analyzer 2017-01-05T21:25:46.087327+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7jY803699GG65G542pjYk ENCSR000EAG https://www.encodeproject.org/experiments/ENCSR000EAG transcription factor RELA-human GM12878 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR387QUV https://www.encodeproject.org/experiments/ENCSR387QUV transcription factor RELB-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF869PJB https://www.encodeproject.org/files/ENCFF869PJB/@@download/ENCFF869PJB.bam ENCFF673ZOT https://www.encodeproject.org/files/ENCFF673ZOT/@@download/ENCFF673ZOT.bam 52.3 M 0 50.6 M 0.969 PE 100 100 native 22.7 M 0.0 M 18.8 M 0.719 0.83 0.83 5.64 240 1.15 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/8980d56f-d5dc-4083-a9bd-3be898d7d859/@@download/cross_correlation_plot/ENCFF009PBBENCFF713GZG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB876UEE michael-snyder:L-1872 "ENCFF009PBB,ENCFF713GZG" HiSeq 2000 2016-10-09T17:05:07.776738+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6KV80jv1XYYX2Fxk3f6FV ENCSR387QUV https://www.encodeproject.org/experiments/ENCSR387QUV transcription factor RELB-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF476WPJ https://www.encodeproject.org/files/ENCFF476WPJ/@@download/ENCFF476WPJ.bam ENCFF071AWI https://www.encodeproject.org/files/ENCFF071AWI/@@download/ENCFF071AWI.bam 53.1 M 0 51.3 M 0.967 PE 100 100 native 23.2 M 0.0 M 18.3 M 0.688 0.79 0.78 4.50 255 1.25 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b5ff629-60e4-4d60-bf4a-87ec8a8d8524/@@download/cross_correlation_plot/ENCFF385BNNENCFF156KWQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB639QEJ michael-snyder:L-1873 "ENCFF156KWQ,ENCFF385BNN" HiSeq 2000 2016-10-09T17:05:04.097851+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6KYQ0jv1g5yGjfvVx0PVy ENCSR000DZW https://www.encodeproject.org/experiments/ENCSR000DZW transcription factor RFX5-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF707BSC https://www.encodeproject.org/files/ENCFF707BSC/@@download/ENCFF707BSC.bam ENCFF887QJG https://www.encodeproject.org/files/ENCFF887QJG/@@download/ENCFF887QJG.bam 33.6 M 0 30.4 M 0.907 SE 36 28 28 0.0 M 21.1 M 20.1 M 0.599 0.95 0.96 23.04 110 1.07 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/709c86df-693e-4f24-a384-9d69bd51fea3/@@download/cross_correlation_plot/ENCFF000WDO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVU ENCFF000WDO Illumina Genome Analyzer 2017-01-05T21:31:41.784571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7VvQ0369Pyf0JG49f330v ENCSR000DZW https://www.encodeproject.org/experiments/ENCSR000DZW transcription factor RFX5-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF086GHN https://www.encodeproject.org/files/ENCFF086GHN/@@download/ENCFF086GHN.bam ENCFF150IXN https://www.encodeproject.org/files/ENCFF150IXN/@@download/ENCFF150IXN.bam 24.2 M 0 23.1 M 0.952 SE 36 28 28 0.0 M 16.3 M 15.8 M 0.653 0.97 0.98 52.15 125 1.13 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee75e0e7-1b14-48b1-9e09-3f606cfd6f8c/@@download/cross_correlation_plot/ENCFF000WDK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABR ENCFF000WDK Illumina Genome Analyzer 2017-01-05T21:31:37.195902+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7X180369Kbx0VG4x73zxj ENCSR000DYX https://www.encodeproject.org/experiments/ENCSR000DYX transcription factor SIN3A-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF952XKW https://www.encodeproject.org/files/ENCFF952XKW/@@download/ENCFF952XKW.bam ENCFF260YKP https://www.encodeproject.org/files/ENCFF260YKP/@@download/ENCFF260YKP.bam 23.6 M 0 23.3 M 0.989 SE 36 28 28 0.0 M 16.9 M 16.2 M 0.688 0.96 0.96 27.26 120 1.05 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/654164c0-9c85-4b31-9707-a78d6b9cb0c2/@@download/cross_correlation_plot/ENCFF000WDC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOB ENCFF000WDC Illumina Genome Analyzer 2017-01-05T21:31:04.538341+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Z200369PjBfKG4QzQvzj ENCSR000DYX https://www.encodeproject.org/experiments/ENCSR000DYX transcription factor SIN3A-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF884HCB https://www.encodeproject.org/files/ENCFF884HCB/@@download/ENCFF884HCB.bam ENCFF760XFV https://www.encodeproject.org/files/ENCFF760XFV/@@download/ENCFF760XFV.bam 29.9 M 0 29.1 M 0.975 SE 36 28 28 0.0 M 21.0 M 19.9 M 0.668 0.95 0.95 20.72 110 1.08 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/ffa759c1-cd6e-4c04-81b3-d63c90b6f92b/@@download/cross_correlation_plot/ENCFF000WDE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AER ENCFF000WDE Illumina Genome Analyzer 2017-01-05T21:31:17.695458+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Z480369J2YG2G5JGYVZj ENCSR212YKD https://www.encodeproject.org/experiments/ENCSR212YKD transcription factor SKIL-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF807RLO https://www.encodeproject.org/files/ENCFF807RLO/@@download/ENCFF807RLO.bam ENCFF587ZOR https://www.encodeproject.org/files/ENCFF587ZOR/@@download/ENCFF587ZOR.bam 106.5 M 0 97.6 M 0.917 PE 100 100 native 42.9 M 0.0 M 19.3 M 0.363 0.45 0.46 1.88 230 1.15 2.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b6d16e9-ca5a-41f0-a4b9-7026b037c4ed/@@download/cross_correlation_plot/ENCFF066RUQENCFF964VCI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB319THK michael-snyder:L-1973 "ENCFF066RUQ,ENCFF964VCI" HiSeq 4000 2016-09-01T21:31:10.975730+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VzGQ03690qpJxvQPPjp3j ENCSR212YKD https://www.encodeproject.org/experiments/ENCSR212YKD transcription factor SKIL-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF065CIX https://www.encodeproject.org/files/ENCFF065CIX/@@download/ENCFF065CIX.bam ENCFF250HJQ https://www.encodeproject.org/files/ENCFF250HJQ/@@download/ENCFF250HJQ.bam 165.0 M 0 151.5 M 0.918 PE 100 100 native 66.5 M 0.0 M 31.4 M 0.380 0.48 0.47 1.84 210 1.09 2.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d084866-2086-4545-8393-659a623d550a/@@download/cross_correlation_plot/ENCFF156SNYENCFF487QUS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB934BCL michael-snyder:L-1978 "ENCFF156SNY,ENCFF487QUS" HiSeq 4000 2016-09-01T21:34:56.511023+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VzKj0369268Zz3vPkfG5Q ENCSR706YUH https://www.encodeproject.org/experiments/ENCSR706YUH transcription factor SMARCA5-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF506OTR https://www.encodeproject.org/files/ENCFF506OTR/@@download/ENCFF506OTR.bam ENCFF276HHB https://www.encodeproject.org/files/ENCFF276HHB/@@download/ENCFF276HHB.bam 80.9 M 0 78.3 M 0.968 PE 100 100 native 34.9 M 0.0 M 32.2 M 0.797 0.92 0.92 12.72 150 1.11 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/8114b9a7-c734-4e59-8cd1-a330122d3f43/@@download/cross_correlation_plot/ENCFF659OJSENCFF017DPB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB813QNG michael-snyder:L-3492 "ENCFF659OJS,ENCFF017DPB" HiSeq 4000 2017-06-06T18:18:08.393401+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Vvj0369Pgf4XGbPvkX3x ENCSR706YUH https://www.encodeproject.org/experiments/ENCSR706YUH transcription factor SMARCA5-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF339LDW https://www.encodeproject.org/files/ENCFF339LDW/@@download/ENCFF339LDW.bam ENCFF568JKN https://www.encodeproject.org/files/ENCFF568JKN/@@download/ENCFF568JKN.bam 97.6 M 0 93.7 M 0.961 PE 100 100 native 41.7 M 0.0 M 36.7 M 0.753 0.88 0.88 8.34 160 1.07 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bd680f3-12c3-41b4-ac63-b97ed862ee22/@@download/cross_correlation_plot/ENCFF416SAWENCFF058YFW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB262OBN michael-snyder:L-3493 "ENCFF058YFW,ENCFF416SAW" HiSeq 4000 2017-06-06T18:18:51.298611+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Vyj0369Pgf4XGbPvkX46 ENCSR000DZP https://www.encodeproject.org/experiments/ENCSR000DZP transcription factor SMC3-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF375OQR https://www.encodeproject.org/files/ENCFF375OQR/@@download/ENCFF375OQR.bam ENCFF759YVV https://www.encodeproject.org/files/ENCFF759YVV/@@download/ENCFF759YVV.bam 31.3 M 0 29.4 M 0.938 SE 36 28 28 0.0 M 22.1 M 20.8 M 0.664 0.94 0.95 21.09 115 1.59 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c60b609-83ad-4cf9-95d6-ab6d35d82226/@@download/cross_correlation_plot/ENCFF000WEB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMQ ENCFF000WEB Illumina Genome Analyzer 2017-01-05T21:26:18.351790+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7jjj0369P4Vg0G4JKxZXk ENCSR000DZP https://www.encodeproject.org/experiments/ENCSR000DZP transcription factor SMC3-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF253RTD https://www.encodeproject.org/files/ENCFF253RTD/@@download/ENCFF253RTD.bam ENCFF170WOC https://www.encodeproject.org/files/ENCFF170WOC/@@download/ENCFF170WOC.bam 42.5 M 0 38.9 M 0.916 SE 36 28 28 0.0 M 27.2 M 26.1 M 0.613 0.96 0.96 23.07 115 1.05 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/0aa62d93-07f9-43ef-9d33-caabb370dd2a/@@download/cross_correlation_plot/ENCFF000WEC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADW ENCFF000WEC Illumina Genome Analyzer 2017-01-05T21:26:27.740508+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7jy80369PjBfKG4QzQx1k ENCSR000DYU https://www.encodeproject.org/experiments/ENCSR000DYU transcription factor SREBF1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF269VOK https://www.encodeproject.org/files/ENCFF269VOK/@@download/ENCFF269VOK.bam ENCFF941NIT https://www.encodeproject.org/files/ENCFF941NIT/@@download/ENCFF941NIT.bam 30.7 M 0 30.3 M 0.986 SE 36 36 native 0.0 M 23.9 M 20.2 M 0.657 0.85 0.84 6.14 150 1.04 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/d497f864-3875-488b-bed8-897b068de47d/@@download/cross_correlation_plot/ENCFF000WDW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANY ENCFF000WDW Illumina Genome Analyzer 2016-12-11T07:46:54.336354+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Vjj0369KbxV61z4GFx13 ENCSR000DYU https://www.encodeproject.org/experiments/ENCSR000DYU transcription factor SREBF1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF177QCA https://www.encodeproject.org/files/ENCFF177QCA/@@download/ENCFF177QCA.bam ENCFF650PKJ https://www.encodeproject.org/files/ENCFF650PKJ/@@download/ENCFF650PKJ.bam 33.6 M 0 32.9 M 0.978 SE 36 36 native 0.0 M 25.7 M 21.9 M 0.652 0.86 0.85 6.68 130 1.03 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/79e3aa91-856c-45d2-bf4d-7a433497f7bf/@@download/cross_correlation_plot/ENCFF000WDY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANZ ENCFF000WDY Illumina Genome Analyzer 2016-12-11T09:29:51.017632+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Vy803697k5jKB6pJ7v3V ENCSR000DYT https://www.encodeproject.org/experiments/ENCSR000DYT transcription factor SREBF2-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF154GZC https://www.encodeproject.org/files/ENCFF154GZC/@@download/ENCFF154GZC.bam ENCFF764ZSP https://www.encodeproject.org/files/ENCFF764ZSP/@@download/ENCFF764ZSP.bam 31.0 M 0 30.6 M 0.987 SE 36 36 native 0.0 M 24.0 M 20.9 M 0.674 0.87 0.87 7.65 165 1.05 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/66db6bfd-3034-42b6-955c-bfa8ffb0dbb0/@@download/cross_correlation_plot/ENCFF000WEF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJO ENCFF000WEF Illumina Genome Analyzer 2016-12-11T07:46:43.269002+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166QGj03692yykb1zBpz869 ENCSR000DYT https://www.encodeproject.org/experiments/ENCSR000DYT transcription factor SREBF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF637TAF https://www.encodeproject.org/files/ENCFF637TAF/@@download/ENCFF637TAF.bam ENCFF593LWQ https://www.encodeproject.org/files/ENCFF593LWQ/@@download/ENCFF593LWQ.bam 32.7 M 0 31.6 M 0.967 SE 36 36 native 0.0 M 24.7 M 21.5 M 0.660 0.88 0.87 7.79 150 1.05 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/f18f7699-1cce-43e5-b9ca-28826c832e53/@@download/cross_correlation_plot/ENCFF000WEH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJP ENCFF000WEH Illumina Genome Analyzer 2016-12-11T08:33:34.851791+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166QX003692yykb1zBpz86Y ENCSR000DZM https://www.encodeproject.org/experiments/ENCSR000DZM transcription factor STAT1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF111ILW https://www.encodeproject.org/files/ENCFF111ILW/@@download/ENCFF111ILW.bam ENCFF126REB https://www.encodeproject.org/files/ENCFF126REB/@@download/ENCFF126REB.bam 27.3 M 0 25.6 M 0.937 SE 36 28 28 0.0 M 18.1 M 17.6 M 0.646 0.97 0.97 36.83 90 1.03 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d57fd84-e841-482d-976a-2a34e8280dd6/@@download/cross_correlation_plot/ENCFF000WFE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMP ENCFF000WFE Illumina Genome Analyzer 2017-01-05T21:15:13.457192+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g81Vj0369P4Vg0G4JKxZfB ENCSR000DZM https://www.encodeproject.org/experiments/ENCSR000DZM transcription factor STAT1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF885KSI https://www.encodeproject.org/files/ENCFF885KSI/@@download/ENCFF885KSI.bam ENCFF479OSP https://www.encodeproject.org/files/ENCFF479OSP/@@download/ENCFF479OSP.bam 25.5 M 0 23.6 M 0.925 SE 36 28 28 0.0 M 16.1 M 15.6 M 0.610 0.97 0.97 38.99 115 1.04 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/ace03317-d169-4354-83e9-21a2961b500b/@@download/cross_correlation_plot/ENCFF000WFD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJK ENCFF000WFD Illumina Genome Analyzer 2017-01-05T21:15:25.188553+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g81fj0369PjBfKG4QzQx4j ENCSR332EYT https://www.encodeproject.org/experiments/ENCSR332EYT transcription factor STAT1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF735CSF https://www.encodeproject.org/files/ENCFF735CSF/@@download/ENCFF735CSF.bam ENCFF432SGY https://www.encodeproject.org/files/ENCFF432SGY/@@download/ENCFF432SGY.bam 59.6 M 0 58.6 M 0.983 PE 100 100 native 26.4 M 0.0 M 24.9 M 0.834 0.94 0.94 17.51 220 1.08 8.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e3a61a2-691e-4fd0-802a-a0bc4a5a4f7e/@@download/cross_correlation_plot/ENCFF002ELAENCFF002EKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB726PMJ michael-snyder:819_A_truseq_CAGATC "ENCFF002ELA,ENCFF002EKZ" HiSeq 2000 2016-10-29T18:06:31.538472+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B23zj0jv1b140QP5B2xKgJ ENCSR332EYT https://www.encodeproject.org/experiments/ENCSR332EYT transcription factor STAT1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF494QGK https://www.encodeproject.org/files/ENCFF494QGK/@@download/ENCFF494QGK.bam ENCFF166UJI https://www.encodeproject.org/files/ENCFF166UJI/@@download/ENCFF166UJI.bam 59.7 M 0 58.5 M 0.980 PE 100 100 native 26.5 M 0.0 M 22.8 M 0.765 0.86 0.86 6.93 225 1.09 7.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5eb70d4-d13a-4915-89ce-2ad45521b84f/@@download/cross_correlation_plot/ENCFF002ELBENCFF002ELE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB608UML michael-snyder:819_A_truseq_GATCAG "ENCFF002ELB,ENCFF002ELE" HiSeq 2000 2016-10-29T18:05:52.806687+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B242Q0jv1vJ6xQfbB7FXb3 ENCSR000DZV https://www.encodeproject.org/experiments/ENCSR000DZV transcription factor STAT3-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF453OOT https://www.encodeproject.org/files/ENCFF453OOT/@@download/ENCFF453OOT.bam ENCFF575BMM https://www.encodeproject.org/files/ENCFF575BMM/@@download/ENCFF575BMM.bam 29.4 M 0 23.9 M 0.812 SE 36 28 28 0.0 M 16.2 M 15.7 M 0.533 0.97 0.97 29.42 150 1.04 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/946cb6ad-1ae4-482c-8eac-ef4999082ac0/@@download/cross_correlation_plot/ENCFF000WFK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOQ ENCFF000WFK Illumina Genome Analyzer 2017-01-05T21:31:17.681355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Y680369Kbx0VG4x73zz6 ENCSR000DZV https://www.encodeproject.org/experiments/ENCSR000DZV transcription factor STAT3-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF145QDZ https://www.encodeproject.org/files/ENCFF145QDZ/@@download/ENCFF145QDZ.bam ENCFF548FQS https://www.encodeproject.org/files/ENCFF548FQS/@@download/ENCFF548FQS.bam 26.2 M 0 22.2 M 0.847 SE 36 28 28 0.0 M 15.3 M 15.0 M 0.574 0.98 0.98 51.36 120 1.05 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/4dd17521-7acc-44d9-b987-adc6a55badc9/@@download/cross_correlation_plot/ENCFF000WFJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHL ENCFF000WFJ Illumina Genome Analyzer 2017-01-05T21:31:21.596889+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7YFQ03697J9fxG4f90kK1 ENCSR412QBS https://www.encodeproject.org/experiments/ENCSR412QBS "RNA binding protein,transcription factor" TARDBP-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF902XGC https://www.encodeproject.org/files/ENCFF902XGC/@@download/ENCFF902XGC.bam ENCFF959CLS https://www.encodeproject.org/files/ENCFF959CLS/@@download/ENCFF959CLS.bam 59.3 M 0 56.8 M 0.957 PE 100 100 native 25.3 M 0.0 M 24.1 M 0.814 0.96 0.96 22.49 210 1.10 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/4684f709-c60e-468a-8d51-69d6236d55c2/@@download/cross_correlation_plot/ENCFF481LLTENCFF887YKT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB993ETM michael-snyder:L-1996 "ENCFF887YKT,ENCFF481LLT" HiSeq 2000 2016-10-09T17:04:22.030705+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49580jv1QxJBfj5Zb2ppj ENCSR412QBS https://www.encodeproject.org/experiments/ENCSR412QBS "RNA binding protein,transcription factor" TARDBP-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF141RIS https://www.encodeproject.org/files/ENCFF141RIS/@@download/ENCFF141RIS.bam ENCFF376FCT https://www.encodeproject.org/files/ENCFF376FCT/@@download/ENCFF376FCT.bam 66.3 M 0 64.2 M 0.969 PE 100 100 native 28.5 M 0.0 M 27.4 M 0.827 0.96 0.96 25.15 195 1.09 2.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/18a27374-884b-4e56-a075-284ef3c7f3da/@@download/cross_correlation_plot/ENCFF176ERKENCFF178JHO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB603ZYH michael-snyder:L-1997 "ENCFF178JHO,ENCFF176ERK" HiSeq 2000 2016-10-09T17:04:49.621447+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv496j0jv1vY92b0GYjVG02 ENCSR000DYZ https://www.encodeproject.org/experiments/ENCSR000DYZ transcription factor TBL1XR1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF600WBJ https://www.encodeproject.org/files/ENCFF600WBJ/@@download/ENCFF600WBJ.bam ENCFF780BCV https://www.encodeproject.org/files/ENCFF780BCV/@@download/ENCFF780BCV.bam 23.2 M 0 22.4 M 0.966 SE 36 28 28 0.0 M 16.3 M 15.6 M 0.674 0.96 0.96 28.96 105 1.10 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c06cce8b-febc-4ace-aa35-83d5ac779ccc/@@download/cross_correlation_plot/ENCFF000WEY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHQ ENCFF000WEY Illumina Genome Analyzer 2017-01-05T21:31:25.788535+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7X700369P4Vg0G4JKxZPp ENCSR000DYZ https://www.encodeproject.org/experiments/ENCSR000DYZ transcription factor TBL1XR1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF261NIN https://www.encodeproject.org/files/ENCFF261NIN/@@download/ENCFF261NIN.bam ENCFF650KNR https://www.encodeproject.org/files/ENCFF650KNR/@@download/ENCFF650KNR.bam 28.0 M 0 27.7 M 0.988 SE 36 28 28 0.0 M 20.3 M 18.9 M 0.674 0.93 0.95 22.81 120 1.05 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d520897-d175-491c-ba8a-5d6f425a227f/@@download/cross_correlation_plot/ENCFF000WFA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADP ENCFF000WFA Illumina Genome Analyzer 2017-01-05T21:31:30.603841+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7XFj0369Pyf0JG49f3315 ENCSR000DZZ https://www.encodeproject.org/experiments/ENCSR000DZZ transcription factor TBP-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF987AWV https://www.encodeproject.org/files/ENCFF987AWV/@@download/ENCFF987AWV.bam ENCFF620DDS https://www.encodeproject.org/files/ENCFF620DDS/@@download/ENCFF620DDS.bam 28.1 M 0 23.8 M 0.845 SE 36 28 28 0.0 M 16.4 M 15.3 M 0.545 0.94 0.96 29.85 145 1.30 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ce7ec75-6a58-4b81-ac15-2cde3caf4dc1/@@download/cross_correlation_plot/ENCFF000WFQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEW ENCFF000WFQ Illumina Genome Analyzer 2017-01-05T21:29:07.988100+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7f7Q0369PjBfKG4QzQx0y ENCSR000DZZ https://www.encodeproject.org/experiments/ENCSR000DZZ transcription factor TBP-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF910NHM https://www.encodeproject.org/files/ENCFF910NHM/@@download/ENCFF910NHM.bam ENCFF336RFB https://www.encodeproject.org/files/ENCFF336RFB/@@download/ENCFF336RFB.bam 31.2 M 0 23.2 M 0.744 SE 36 28 28 0.0 M 16.2 M 15.1 M 0.484 0.94 0.95 22.13 140 1.18 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/3344b73d-f858-4ce1-801a-e575cdfde3f1/@@download/cross_correlation_plot/ENCFF000WFP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEV ENCFF000WFP Illumina Genome Analyzer 2017-01-05T21:29:21.756161+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7fB80369J2YG2G5JGYVf0 ENCSR739IHN https://www.encodeproject.org/experiments/ENCSR739IHN transcription factor TBX21-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF548STS https://www.encodeproject.org/files/ENCFF548STS/@@download/ENCFF548STS.bam ENCFF300OJT https://www.encodeproject.org/files/ENCFF300OJT/@@download/ENCFF300OJT.bam 34.8 M 0 33.2 M 0.952 PE 100 100 native 14.9 M 0.0 M 11.7 M 0.670 0.78 0.78 4.45 220 1.26 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/d76dd12e-c6e7-4d23-bdb8-a79c78965b02/@@download/cross_correlation_plot/ENCFF849OLWENCFF315WXD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB890RUD michael-snyder:L-1794 "ENCFF849OLW,ENCFF315WXD" HiSeq 2000 2016-10-09T17:01:29.785470+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43xj0jv1XYYX2Fxk3f51Z ENCSR739IHN https://www.encodeproject.org/experiments/ENCSR739IHN transcription factor TBX21-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF360EFO https://www.encodeproject.org/files/ENCFF360EFO/@@download/ENCFF360EFO.bam ENCFF822WHM https://www.encodeproject.org/files/ENCFF822WHM/@@download/ENCFF822WHM.bam 48.2 M 0 46.6 M 0.967 PE 100 100 native 21.2 M 0.0 M 18.0 M 0.748 0.85 0.85 6.42 215 1.48 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec214f24-35bf-4086-a133-13e19f978bd0/@@download/cross_correlation_plot/ENCFF551RMTENCFF881YFO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB106PKX michael-snyder:L-1795 "ENCFF881YFO,ENCFF551RMT" HiSeq 2000 2016-10-09T17:04:44.759371+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43z80jv1xPyfX78Yz4j04 ENCSR725VFL https://www.encodeproject.org/experiments/ENCSR725VFL transcription factor TCF12-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF112UBX https://www.encodeproject.org/files/ENCFF112UBX/@@download/ENCFF112UBX.bam ENCFF744FOT https://www.encodeproject.org/files/ENCFF744FOT/@@download/ENCFF744FOT.bam 81.3 M 0 79.4 M 0.977 PE 100 100 native 36.1 M 0.0 M 20.5 M 0.505 0.57 0.54 1.96 170 1.13 3.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/b61126f6-1adf-4eef-8fc8-0800f60c3c22/@@download/cross_correlation_plot/ENCFF238XIHENCFF183QAJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB984OVA michael-snyder:L-3450 "ENCFF238XIH,ENCFF183QAJ" HiSeq 4000 2017-06-06T18:22:37.085505+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Q2j036990P6v90pyg340 ENCSR725VFL https://www.encodeproject.org/experiments/ENCSR725VFL transcription factor TCF12-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF116EPL https://www.encodeproject.org/files/ENCFF116EPL/@@download/ENCFF116EPL.bam ENCFF239NLE https://www.encodeproject.org/files/ENCFF239NLE/@@download/ENCFF239NLE.bam 103.7 M 0 98.1 M 0.946 PE 100 100 native 44.0 M 0.0 M 27.8 M 0.536 0.63 0.61 2.45 170 1.09 2.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/0623ba71-0217-44d3-9de6-f009c47a8d71/@@download/cross_correlation_plot/ENCFF530OLZENCFF431UPR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB797QGH michael-snyder:L-3451 "ENCFF530OLZ,ENCFF431UPR" HiSeq 4000 2017-06-06T18:24:08.562123+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Q4j0369Pgf4XGbPvkX1V ENCSR637QAM https://www.encodeproject.org/experiments/ENCSR637QAM transcription factor TRIM22-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF083LQR https://www.encodeproject.org/files/ENCFF083LQR/@@download/ENCFF083LQR.bam ENCFF670VGQ https://www.encodeproject.org/files/ENCFF670VGQ/@@download/ENCFF670VGQ.bam 101.9 M 0 99.5 M 0.976 PE 100 100 native 44.8 M 0.0 M 37.0 M 0.727 0.83 0.82 5.50 235 1.06 5.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c17e1c2-46a3-4528-bab3-c1be8e7f6b19/@@download/cross_correlation_plot/ENCFF002DOLENCFF002EHS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB635OIQ michael-snyder:709_B_TruSeq_ATCACG "ENCFF002DOL,ENCFF002EHS" HiSeq 2000 2016-10-09T17:43:37.602738+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5v9j0jv1XpBpGXQxqxY9Y ENCSR637QAM https://www.encodeproject.org/experiments/ENCSR637QAM transcription factor TRIM22-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF559OOA https://www.encodeproject.org/files/ENCFF559OOA/@@download/ENCFF559OOA.bam ENCFF369CTE https://www.encodeproject.org/files/ENCFF369CTE/@@download/ENCFF369CTE.bam 91.4 M 0 88.6 M 0.969 PE 100 100 native 40.3 M 0.0 M 28.7 M 0.628 0.71 0.70 3.16 240 1.07 4.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf9e8070-b6fc-495a-b480-e2375c163552/@@download/cross_correlation_plot/ENCFF002EHQENCFF002DON.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB183GRG michael-snyder:709_B_TruSeq_TTAGGC "ENCFF002EHQ,ENCFF002DON" HiSeq 2000 2016-10-09T17:41:29.556346+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5vG00jv1Y68V4KG8yz37V ENCSR835XKS https://www.encodeproject.org/experiments/ENCSR835XKS transcription factor TRIM22-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF366RSX https://www.encodeproject.org/files/ENCFF366RSX/@@download/ENCFF366RSX.bam ENCFF861ZPY https://www.encodeproject.org/files/ENCFF861ZPY/@@download/ENCFF861ZPY.bam 42.0 M 0 40.2 M 0.957 PE 100 100 native 18.0 M 0.0 M 16.6 M 0.789 0.92 0.92 12.60 220 1.14 2.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3f9a103-c5eb-45e8-bb6f-017113ce1390/@@download/cross_correlation_plot/ENCFF050IAWENCFF243YFW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB589XPX michael-snyder:L-1994 "ENCFF243YFW,ENCFF050IAW" HiSeq 2000 2016-10-08T07:50:06.510590+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbK1j0jv1ZZ7QvzQX049k7 ENCSR835XKS https://www.encodeproject.org/experiments/ENCSR835XKS transcription factor TRIM22-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF465CEB https://www.encodeproject.org/files/ENCFF465CEB/@@download/ENCFF465CEB.bam ENCFF692TYF https://www.encodeproject.org/files/ENCFF692TYF/@@download/ENCFF692TYF.bam 53.9 M 0 51.0 M 0.947 PE 100 100 native 22.8 M 0.0 M 20.9 M 0.778 0.92 0.92 12.30 205 1.12 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/06f5aee3-2a4f-4ae5-978a-080ddd61f842/@@download/cross_correlation_plot/ENCFF177PDIENCFF061MAR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB375YYG michael-snyder:L-1995 "ENCFF177PDI,ENCFF061MAR" HiSeq 2000 2016-10-08T07:50:34.307686+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbK400jv1xPyfX78Yz4Y7X ENCSR459FTB https://www.encodeproject.org/experiments/ENCSR459FTB transcription factor UBTF-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF898VJT https://www.encodeproject.org/files/ENCFF898VJT/@@download/ENCFF898VJT.bam ENCFF033TCK https://www.encodeproject.org/files/ENCFF033TCK/@@download/ENCFF033TCK.bam 28.6 M 0 28.1 M 0.983 SE 36 36 native 0.0 M 20.3 M 19.4 M 0.679 0.96 0.96 22.28 105 1.02 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/95decfb3-b4a3-493c-a14e-29515e71090c/@@download/cross_correlation_plot/ENCFF002EDC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB684SXP michael-snyder:UBTF_SAB1404509_GM12878_Rep1 ENCFF002EDC Illumina Genome Analyzer IIx 2016-10-09T17:00:11.644688+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49Zj0jv1QxJBfj5Zb2pqv ENCSR459FTB https://www.encodeproject.org/experiments/ENCSR459FTB transcription factor UBTF-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF396GSL https://www.encodeproject.org/files/ENCFF396GSL/@@download/ENCFF396GSL.bam ENCFF390GUF https://www.encodeproject.org/files/ENCFF390GUF/@@download/ENCFF390GUF.bam 22.1 M 0 20.9 M 0.947 SE 36 36 native 0.0 M 14.8 M 13.0 M 0.589 0.88 0.87 7.71 110 1.05 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e309c13-6cf4-4d23-b33f-b1ca4f03a1ff/@@download/cross_correlation_plot/ENCFF002EDB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB465JXC michael-snyder:UBTF_SAB1404509_GM12878_Rep2 ENCFF002EDB Illumina Genome Analyzer IIx 2016-10-09T16:59:42.551974+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49f80jv1QxJBfj5Zb2pv4 ENCSR000DZU https://www.encodeproject.org/experiments/ENCSR000DZU transcription factor USF2-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF713SUL https://www.encodeproject.org/files/ENCFF713SUL/@@download/ENCFF713SUL.bam ENCFF379OHG https://www.encodeproject.org/files/ENCFF379OHG/@@download/ENCFF379OHG.bam 27.0 M 0 23.4 M 0.866 SE 36 28 28 0.0 M 16.1 M 15.7 M 0.582 0.98 0.98 65.61 125 1.21 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/26fa7000-6723-4eb4-9718-2873abd321bf/@@download/cross_correlation_plot/ENCFF000WGB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVC ENCFF000WGB Illumina Genome Analyzer 2017-01-05T21:31:26.648872+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7XQj0369Pyf0JG49f331K ENCSR000DZU https://www.encodeproject.org/experiments/ENCSR000DZU transcription factor USF2-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF341YTC https://www.encodeproject.org/files/ENCFF341YTC/@@download/ENCFF341YTC.bam ENCFF496UYU https://www.encodeproject.org/files/ENCFF496UYU/@@download/ENCFF496UYU.bam 20.7 M 0 19.3 M 0.934 SE 36 28 28 0.0 M 13.3 M 13.0 M 0.630 0.98 0.99 76.29 105 1.17 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/3afc600a-0e66-4676-a54e-fbb2017cb3e0/@@download/cross_correlation_plot/ENCFF000WGC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVD ENCFF000WGC Illumina Genome Analyzer 2017-01-05T21:31:13.963571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Xg003697J9fxG4f90kJB ENCSR000EAA https://www.encodeproject.org/experiments/ENCSR000EAA transcription factor WRNIP1-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF473BSK https://www.encodeproject.org/files/ENCFF473BSK/@@download/ENCFF473BSK.bam ENCFF042NGB https://www.encodeproject.org/files/ENCFF042NGB/@@download/ENCFF042NGB.bam 27.7 M 0 22.2 M 0.800 SE 36 28 28 0.0 M 14.6 M 14.2 M 0.511 0.97 0.97 37.57 140 1.05 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/5452d30a-5049-4ffc-927c-08f425cc2456/@@download/cross_correlation_plot/ENCFF000WGD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGH ENCFF000WGD Illumina Genome Analyzer 2017-01-05T21:29:12.218957+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7fPQ0369Kbx0VG4x74017 ENCSR000EAA https://www.encodeproject.org/experiments/ENCSR000EAA transcription factor WRNIP1-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF070YVD https://www.encodeproject.org/files/ENCFF070YVD/@@download/ENCFF070YVD.bam ENCFF616FGG https://www.encodeproject.org/files/ENCFF616FGG/@@download/ENCFF616FGG.bam 27.9 M 0 22.4 M 0.803 SE 36 28 28 0.0 M 14.7 M 14.3 M 0.513 0.97 0.97 35.61 150 1.06 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ca02b50-089a-47e4-af43-45bd1cf3eba5/@@download/cross_correlation_plot/ENCFF000WGE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUO ENCFF000WGE Illumina Genome Analyzer 2017-01-05T21:28:39.201495+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7fZQ03699GG65G542pjXj ENCSR205SKQ https://www.encodeproject.org/experiments/ENCSR205SKQ "RNA binding protein,transcription factor" YBX1-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF053VFZ https://www.encodeproject.org/files/ENCFF053VFZ/@@download/ENCFF053VFZ.bam ENCFF675OUX https://www.encodeproject.org/files/ENCFF675OUX/@@download/ENCFF675OUX.bam 57.8 M 0 55.6 M 0.963 PE 100 100 native 24.6 M 0.0 M 23.5 M 0.814 0.96 0.96 22.15 200 1.07 5.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/df58d6ac-de59-4e04-b558-d63e9fdbd311/@@download/cross_correlation_plot/ENCFF379KSRENCFF441WIT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB159YJL michael-snyder:L-2000 "ENCFF441WIT,ENCFF379KSR" HiSeq 2000 2016-10-09T17:03:50.310743+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44j80jv1f60PxyZ9JGP54 ENCSR205SKQ https://www.encodeproject.org/experiments/ENCSR205SKQ "RNA binding protein,transcription factor" YBX1-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF629WCK https://www.encodeproject.org/files/ENCFF629WCK/@@download/ENCFF629WCK.bam ENCFF922RKY https://www.encodeproject.org/files/ENCFF922RKY/@@download/ENCFF922RKY.bam 62.0 M 0 59.7 M 0.962 PE 100 100 native 26.5 M 0.0 M 25.5 M 0.823 0.97 0.97 28.92 205 1.06 5.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9a73db3-3645-48af-b471-e0523c2c2542/@@download/cross_correlation_plot/ENCFF708BOTENCFF025TUY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB927CUY michael-snyder:L-2001 "ENCFF025TUY,ENCFF708BOT" HiSeq 2000 2016-10-09T17:04:13.954502+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44kj0jv1xPyfX78Yz4j16 ENCSR189YYK https://www.encodeproject.org/experiments/ENCSR189YYK transcription factor ZBTB40-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF241ICI https://www.encodeproject.org/files/ENCFF241ICI/@@download/ENCFF241ICI.bam ENCFF475YMR https://www.encodeproject.org/files/ENCFF475YMR/@@download/ENCFF475YMR.bam 107.5 M 0 97.3 M 0.905 PE 100 100 native 41.1 M 0.0 M 35.8 M 0.665 0.87 0.87 7.63 230 1.12 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/617d6dbd-b297-48d1-876e-e7bff945f9dd/@@download/cross_correlation_plot/ENCFF868YNQENCFF471LIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB317MFR michael-snyder:L-1898 "ENCFF471LIQ,ENCFF868YNQ" HiSeq 4000 2016-09-16T03:21:50.570084+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyv48036994Jx4PVBXKY0B ENCSR189YYK https://www.encodeproject.org/experiments/ENCSR189YYK transcription factor ZBTB40-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF585ZIJ https://www.encodeproject.org/files/ENCFF585ZIJ/@@download/ENCFF585ZIJ.bam ENCFF549EZJ https://www.encodeproject.org/files/ENCFF549EZJ/@@download/ENCFF549EZJ.bam 89.0 M 0 85.5 M 0.961 PE 100 100 native 37.4 M 0.0 M 20.2 M 0.455 0.54 0.55 2.27 255 1.93 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/991cdf23-7581-4064-acda-1f1b301e9013/@@download/cross_correlation_plot/ENCFF199JYMENCFF699UWV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB373YZX michael-snyder:L-1899 "ENCFF699UWV,ENCFF199JYM" HiSeq 4000 2016-09-16T03:17:45.559850+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyv780369PzXj14kJK8P45 ENCSR000DZL https://www.encodeproject.org/experiments/ENCSR000DZL transcription factor ZNF143-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF515QUC https://www.encodeproject.org/files/ENCFF515QUC/@@download/ENCFF515QUC.bam ENCFF557VJE https://www.encodeproject.org/files/ENCFF557VJE/@@download/ENCFF557VJE.bam 30.0 M 0 27.9 M 0.929 SE 36 28 28 0.0 M 20.8 M 17.9 M 0.595 0.86 0.93 18.77 90 2.03 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/355fea65-d0aa-4a50-9a27-b740d8e819d2/@@download/cross_correlation_plot/ENCFF000WGX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACW ENCFF000WGX Illumina Genome Analyzer 2017-01-05T21:18:44.084836+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g809j0369Pyf0JG49f3370 ENCSR000DZL https://www.encodeproject.org/experiments/ENCSR000DZL transcription factor ZNF143-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF803OPC https://www.encodeproject.org/files/ENCFF803OPC/@@download/ENCFF803OPC.bam ENCFF418QOL https://www.encodeproject.org/files/ENCFF418QOL/@@download/ENCFF418QOL.bam 25.5 M 0 23.2 M 0.908 SE 36 28 28 0.0 M 16.4 M 14.6 M 0.572 0.89 0.94 23.40 110 1.79 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/a3efc216-15cc-49a4-82aa-6f4d84f2a390/@@download/cross_correlation_plot/ENCFF000WGW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACX ENCFF000WGW Illumina Genome Analyzer 2017-01-05T21:18:39.952608+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g80Kj0369P4Vg0G4JKxZby ENCSR936XTK https://www.encodeproject.org/experiments/ENCSR936XTK transcription factor ZNF143-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF640XZS https://www.encodeproject.org/files/ENCFF640XZS/@@download/ENCFF640XZS.bam ENCFF701IVE https://www.encodeproject.org/files/ENCFF701IVE/@@download/ENCFF701IVE.bam 69.1 M 0 68.1 M 0.985 PE 100 100 native 30.3 M 0.0 M 26.6 M 0.770 0.88 0.88 8.04 215 1.72 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/fde73b6a-c951-421a-87c1-8898df3a6952/@@download/cross_correlation_plot/ENCFF960TNPENCFF640CBP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB842ZPU michael-snyder:L-97 "ENCFF640CBP,ENCFF960TNP" HiSeq 2000 2016-10-09T17:06:50.566374+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Gb00jv1b6Q2yZ51Zb5Z9 ENCSR936XTK https://www.encodeproject.org/experiments/ENCSR936XTK transcription factor ZNF143-human GM12878 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF943EGP https://www.encodeproject.org/files/ENCFF943EGP/@@download/ENCFF943EGP.bam ENCFF285XVW https://www.encodeproject.org/files/ENCFF285XVW/@@download/ENCFF285XVW.bam 86.6 M 0 83.7 M 0.966 PE 100 100 native 37.1 M 0.0 M 34.2 M 0.791 0.92 0.92 12.94 210 1.42 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/083b8fa4-8758-4948-a2f2-ca78fdf789ac/@@download/cross_correlation_plot/ENCFF246DIPENCFF616WSS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB901VQJ michael-snyder:L-152 "ENCFF246DIP,ENCFF616WSS" HiSeq 2000 2016-10-09T17:08:12.973193+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6GgQ0jv1fvz446Zf2J5y0 ENCSR117KWH https://www.encodeproject.org/experiments/ENCSR117KWH transcription factor ZNF207-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF856SJL https://www.encodeproject.org/files/ENCFF856SJL/@@download/ENCFF856SJL.bam ENCFF530LAJ https://www.encodeproject.org/files/ENCFF530LAJ/@@download/ENCFF530LAJ.bam 89.3 M 0 87.6 M 0.981 PE 100 100 native 39.4 M 0.0 M 35.0 M 0.784 0.89 0.89 8.70 245 1.06 6.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/54218a77-9a58-45f2-a48f-f62df80d0e99/@@download/cross_correlation_plot/ENCFF002DOMENCFF002EHO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB260JAG michael-snyder:709_B_TruSeq_CGATGT "ENCFF002EHO,ENCFF002DOM" HiSeq 2000 2016-10-09T17:43:05.707780+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qFQ0jv1QZp37BGvK2BGv ENCSR117KWH https://www.encodeproject.org/experiments/ENCSR117KWH transcription factor ZNF207-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF360OZT https://www.encodeproject.org/files/ENCFF360OZT/@@download/ENCFF360OZT.bam ENCFF856PTQ https://www.encodeproject.org/files/ENCFF856PTQ/@@download/ENCFF856PTQ.bam 92.5 M 0 90.4 M 0.978 PE 100 100 native 41.1 M 0.0 M 34.6 M 0.748 0.84 0.84 6.01 230 1.06 4.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/6145300c-6d73-41ec-864a-f2de6fea84b3/@@download/cross_correlation_plot/ENCFF002EHPENCFF002DOQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB779CDZ michael-snyder:709_B_TruSeq_TGACCA "ENCFF002EHP,ENCFF002DOQ" HiSeq 2000 2016-10-09T17:42:43.926804+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qJQ0jv1fXGPZpVVpjYP7 ENCSR764CZW https://www.encodeproject.org/experiments/ENCSR764CZW transcription factor ZNF217-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF252GCC https://www.encodeproject.org/files/ENCFF252GCC/@@download/ENCFF252GCC.bam ENCFF635MJX https://www.encodeproject.org/files/ENCFF635MJX/@@download/ENCFF635MJX.bam 84.1 M 0 82.4 M 0.980 PE 100 100 native 37.2 M 0.0 M 30.1 M 0.715 0.81 0.80 4.98 200 1.08 3.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/0837c630-b52e-4806-9e56-12e521e95252/@@download/cross_correlation_plot/ENCFF608RBJENCFF870NUU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB197KOI michael-snyder:L-3478 "ENCFF870NUU,ENCFF608RBJ" HiSeq 4000 2017-06-06T18:20:47.703917+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3QpQ0369BkKBG9095vxzg ENCSR764CZW https://www.encodeproject.org/experiments/ENCSR764CZW transcription factor ZNF217-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF577SKC https://www.encodeproject.org/files/ENCFF577SKC/@@download/ENCFF577SKC.bam ENCFF157MZW https://www.encodeproject.org/files/ENCFF157MZW/@@download/ENCFF157MZW.bam 98.7 M 0 96.9 M 0.982 PE 100 100 native 43.4 M 0.0 M 36.5 M 0.740 0.84 0.84 6.12 200 1.07 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/ac51d4b9-db85-4a91-9703-1609ece90f5c/@@download/cross_correlation_plot/ENCFF907HHYENCFF237EAI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB144PGC michael-snyder:L-3479 "ENCFF907HHY,ENCFF237EAI" HiSeq 4000 2017-06-06T18:21:17.688329+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3QvQ0369Gx2gb917Q1j0f ENCSR072PWP https://www.encodeproject.org/experiments/ENCSR072PWP transcription factor ZNF24-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF678GYV https://www.encodeproject.org/files/ENCFF678GYV/@@download/ENCFF678GYV.bam ENCFF473YEO https://www.encodeproject.org/files/ENCFF473YEO/@@download/ENCFF473YEO.bam 90.5 M 0 88.2 M 0.974 PE 100 100 native 39.3 M 0.0 M 32.7 M 0.723 0.83 0.83 5.82 155 1.14 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b565940-f3e6-4ef7-af87-4d75044e1d2a/@@download/cross_correlation_plot/ENCFF659EDDENCFF899BUS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB570CVM michael-snyder:L-3505 "ENCFF899BUS,ENCFF659EDD" HiSeq 4000 2017-06-23T02:24:21.139175+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560b1j036926gYv12YX8qbx ENCSR072PWP https://www.encodeproject.org/experiments/ENCSR072PWP transcription factor ZNF24-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF826HNS https://www.encodeproject.org/files/ENCFF826HNS/@@download/ENCFF826HNS.bam ENCFF842CRE https://www.encodeproject.org/files/ENCFF842CRE/@@download/ENCFF842CRE.bam 94.1 M 0 90.3 M 0.960 PE 100 100 native 39.6 M 0.0 M 32.4 M 0.688 0.82 0.82 5.32 150 1.15 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/78f14d04-a0c4-4139-8a7f-13ab74faf6f8/@@download/cross_correlation_plot/ENCFF133HXAENCFF791JGC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB422RYD michael-snyder:L-3506 "ENCFF133HXA,ENCFF791JGC" HiSeq 4000 2017-06-23T02:12:57.998301+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560b580369Gvz2p13gb1zV7 ENCSR000DYP https://www.encodeproject.org/experiments/ENCSR000DYP transcription factor ZNF384-human GM12878 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF055QMP https://www.encodeproject.org/files/ENCFF055QMP/@@download/ENCFF055QMP.bam ENCFF752WMS https://www.encodeproject.org/files/ENCFF752WMS/@@download/ENCFF752WMS.bam 29.1 M 0 27.9 M 0.959 SE 36 28 28 0.0 M 19.7 M 18.7 M 0.643 0.95 0.95 21.35 110 1.15 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/149705b4-caa5-402a-a818-644daa56fedc/@@download/cross_correlation_plot/ENCFF000WGZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUM ENCFF000WGZ Illumina Genome Analyzer 2017-01-05T21:31:13.539019+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7ZZQ03697FPkPG58gbpYV ENCSR000DYP https://www.encodeproject.org/experiments/ENCSR000DYP transcription factor ZNF384-human GM12878 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF230KKA https://www.encodeproject.org/files/ENCFF230KKA/@@download/ENCFF230KKA.bam ENCFF067MJG https://www.encodeproject.org/files/ENCFF067MJG/@@download/ENCFF067MJG.bam 29.5 M 0 27.5 M 0.932 SE 36 28 28 0.0 M 19.5 M 17.3 M 0.588 0.89 0.89 8.67 100 1.07 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/93fa2097-9bd4-4acc-827d-bb6c23632ba7/@@download/cross_correlation_plot/ENCFF000WHB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFV ENCFF000WHB Illumina Genome Analyzer 2017-01-05T21:30:58.398215+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7Zfj03697J9fxG4f90kVp ENCSR173ZVL https://www.encodeproject.org/experiments/ENCSR173ZVL transcription factor ZNF592-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF122LWT https://www.encodeproject.org/files/ENCFF122LWT/@@download/ENCFF122LWT.bam ENCFF719YXO https://www.encodeproject.org/files/ENCFF719YXO/@@download/ENCFF719YXO.bam 87.0 M 0 85.1 M 0.979 PE 100 100 native 38.4 M 0.0 M 26.7 M 0.614 0.69 0.68 3.01 170 1.09 4.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/5eea0a19-a3fe-454d-af14-3e3931ca3851/@@download/cross_correlation_plot/ENCFF773RRJENCFF864GSN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285VWF michael-snyder:L-3501 "ENCFF864GSN,ENCFF773RRJ" HiSeq 4000 2017-06-23T01:58:20.286166+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560ZY803698Vy1z0YXK79jQ ENCSR173ZVL https://www.encodeproject.org/experiments/ENCSR173ZVL transcription factor ZNF592-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF676MWP https://www.encodeproject.org/files/ENCFF676MWP/@@download/ENCFF676MWP.bam ENCFF754PAD https://www.encodeproject.org/files/ENCFF754PAD/@@download/ENCFF754PAD.bam 108.1 M 0 105.9 M 0.980 PE 100 100 native 47.4 M 0.0 M 29.7 M 0.549 0.63 0.61 2.40 160 1.09 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ffb95a8-379f-4e30-8725-2ee22e806af8/@@download/cross_correlation_plot/ENCFF011RRDENCFF460XZT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB853FPR michael-snyder:L-3502 "ENCFF011RRD,ENCFF460XZT" HiSeq 4000 2017-06-23T03:35:22.113588+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Zfj03698Vy1z0YXK79jv ENCSR859FDL https://www.encodeproject.org/experiments/ENCSR859FDL transcription factor ZNF687-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF529JDU https://www.encodeproject.org/files/ENCFF529JDU/@@download/ENCFF529JDU.bam ENCFF078RWZ https://www.encodeproject.org/files/ENCFF078RWZ/@@download/ENCFF078RWZ.bam 94.2 M 0 91.9 M 0.976 PE 100 100 native 41.2 M 0.0 M 34.5 M 0.733 0.84 0.84 5.99 165 1.09 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/191e331f-9711-4783-af8e-dd5fd164fa2d/@@download/cross_correlation_plot/ENCFF814CFQENCFF253VDT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB875SAF michael-snyder:L-3503 "ENCFF814CFQ,ENCFF253VDT" HiSeq 4000 2017-06-23T02:53:12.730008+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560ZG803695by0292QV24VZ ENCSR859FDL https://www.encodeproject.org/experiments/ENCSR859FDL transcription factor ZNF687-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF257XYL https://www.encodeproject.org/files/ENCFF257XYL/@@download/ENCFF257XYL.bam ENCFF197RPF https://www.encodeproject.org/files/ENCFF197RPF/@@download/ENCFF197RPF.bam 92.4 M 0 89.9 M 0.973 PE 100 100 native 40.2 M 0.0 M 31.8 M 0.687 0.79 0.79 4.55 160 1.10 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbc97515-64f0-48a2-acd1-f5da18278fbb/@@download/cross_correlation_plot/ENCFF452DGQENCFF271IUJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB830XBR michael-snyder:L-3504 "ENCFF452DGQ,ENCFF271IUJ" HiSeq 4000 2017-06-23T02:13:33.681002+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560ZPQ0369Ffkvy0Zf6p5kx ENCSR412YGM https://www.encodeproject.org/experiments/ENCSR412YGM transcription factor ZSCAN29-human GM12878 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF806TCI https://www.encodeproject.org/files/ENCFF806TCI/@@download/ENCFF806TCI.bam ENCFF104CQY https://www.encodeproject.org/files/ENCFF104CQY/@@download/ENCFF104CQY.bam 86.8 M 0 82.8 M 0.953 PE 100 100 native 36.8 M 0.0 M 21.1 M 0.486 0.57 0.56 2.14 170 1.13 3.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b1300d3-53cf-4f18-beb2-39ca08370d92/@@download/cross_correlation_plot/ENCFF410XYUENCFF509XFH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB847QUV michael-snyder:L-3432 "ENCFF410XYU,ENCFF509XFH" HiSeq 4000 2017-05-05T10:43:58.783054+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yqpQ03699xk39703jJkbV ENCSR412YGM https://www.encodeproject.org/experiments/ENCSR412YGM transcription factor ZSCAN29-human GM12878 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF350ULX https://www.encodeproject.org/files/ENCFF350ULX/@@download/ENCFF350ULX.bam ENCFF828HRI https://www.encodeproject.org/files/ENCFF828HRI/@@download/ENCFF828HRI.bam 79.6 M 0 77.6 M 0.975 PE 100 100 native 34.3 M 0.0 M 21.3 M 0.534 0.62 0.60 2.36 170 1.10 4.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ff2347b-c4fa-4e35-a53d-22a25181b138/@@download/cross_correlation_plot/ENCFF294ZQWENCFF110RBD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB132WIX michael-snyder:L-3433 "ENCFF110RBD,ENCFF294ZQW" HiSeq 4000 2017-05-05T09:55:40.585984+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yqy00369JxZVj70Jj06B8 ENCSR000EAK https://www.encodeproject.org/experiments/ENCSR000EAK control mouse-IgG-control-human GM12891 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF629OTM https://www.encodeproject.org/files/ENCFF629OTM/@@download/ENCFF629OTM.bam ENCFF253BRM https://www.encodeproject.org/files/ENCFF253BRM/@@download/ENCFF253BRM.bam 18.9 M 0 9.2 M 0.485 SE 28 28 native 0.0 M 4.8 M 4.7 M 0.247 0.98 0.98 59.13 110 1.03 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/088321a1-7624-43aa-a861-7d385fccb7e0/@@download/cross_correlation_plot/ENCFF000WHY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAB ENCFF000WHY Illumina Genome Analyzer 2016-10-26T17:36:23.500908+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082bV80369GK9p461P313Pq ENCSR000EAK https://www.encodeproject.org/experiments/ENCSR000EAK control mouse-IgG-control-human GM12891 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF459PNQ https://www.encodeproject.org/files/ENCFF459PNQ/@@download/ENCFF459PNQ.bam ENCFF912UTQ https://www.encodeproject.org/files/ENCFF912UTQ/@@download/ENCFF912UTQ.bam 17.4 M 0 9.4 M 0.539 SE 28 28 native 0.0 M 5.2 M 5.0 M 0.287 0.97 0.97 31.28 110 1.03 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/9471110b-6d8e-4e5e-b365-74e2d64ae200/@@download/cross_correlation_plot/ENCFF000WHZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAX ENCFF000WHZ Illumina Genome Analyzer 2016-10-26T17:36:22.797552+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082bb00369PQyG3V5B44QB9 ENCSR000EAJ https://www.encodeproject.org/experiments/ENCSR000EAJ transcription factor POLR2A-human GM12891 immortalized cell line michael-snyder ENCODE2 pending SE "28,34" Illumina Genome Analyzer unreviewed ENCSR000EAH https://www.encodeproject.org/experiments/ENCSR000EAH control rabbit-IgG-control-human GM12891 immortalized cell line michael-snyder ENCODE2 pending SE "28,34" Illumina Genome Analyzer requires lab review ENCSR000EAI https://www.encodeproject.org/experiments/ENCSR000EAI transcription factor RELA-human GM12891 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer no available pipeline ENCSR000EAO https://www.encodeproject.org/experiments/ENCSR000EAO control mouse-IgG-control-human GM12892 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF065KDD https://www.encodeproject.org/files/ENCFF065KDD/@@download/ENCFF065KDD.bam ENCFF822OPC https://www.encodeproject.org/files/ENCFF822OPC/@@download/ENCFF822OPC.bam 6.4 M 0 6.1 M 0.941 SE 28 28 native 0.0 M 4.4 M 4.3 M 0.662 0.98 0.98 51.99 100 1.03 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bf8279b-70cb-49c6-8b4c-c4bbde26b650/@@download/cross_correlation_plot/ENCFF000WIQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARI ENCFF000WIQ Illumina Genome Analyzer 2016-10-26T17:36:32.147974+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082KVQ0369KxbFbzV9pvvjQ ENCSR000EAO https://www.encodeproject.org/experiments/ENCSR000EAO control mouse-IgG-control-human GM12892 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF419ZAO https://www.encodeproject.org/files/ENCFF419ZAO/@@download/ENCFF419ZAO.bam ENCFF799TFW https://www.encodeproject.org/files/ENCFF799TFW/@@download/ENCFF799TFW.bam 10.8 M 0 6.0 M 0.555 SE 28 28 native 0.0 M 3.5 M 3.1 M 0.288 0.90 0.90 9.83 120 1.10 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c56cc85-e467-429e-989e-19dff4c90f1e/@@download/cross_correlation_plot/ENCFF000WIX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANL ENCFF000WIX Illumina Genome Analyzer 2016-10-26T17:36:39.214191+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Kg00369KPb3j15B4p8vY ENCSR000EAM https://www.encodeproject.org/experiments/ENCSR000EAM transcription factor POLR2A-human GM12892 immortalized cell line michael-snyder ENCODE2 pending SE "27,28" Illumina Genome Analyzer unreviewed ENCSR000EAL https://www.encodeproject.org/experiments/ENCSR000EAL control rabbit-IgG-control-human GM12892 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF602HED https://www.encodeproject.org/files/ENCFF602HED/@@download/ENCFF602HED.bam ENCFF800XXL https://www.encodeproject.org/files/ENCFF800XXL/@@download/ENCFF800XXL.bam 5.0 M 0 4.8 M 0.958 SE 28 28 native 0.0 M 3.4 M 3.3 M 0.660 0.98 0.98 48.49 90 1.02 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/de54b109-3a7b-45db-8b26-285095effa9a/@@download/cross_correlation_plot/ENCFF000WIZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQO ENCFF000WIZ Illumina Genome Analyzer 2016-10-26T17:37:05.741042+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Gz00369F7fQjy59kFj1q ENCSR000EAL https://www.encodeproject.org/experiments/ENCSR000EAL control rabbit-IgG-control-human GM12892 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF580BOV https://www.encodeproject.org/files/ENCFF580BOV/@@download/ENCFF580BOV.bam ENCFF930GWD https://www.encodeproject.org/files/ENCFF930GWD/@@download/ENCFF930GWD.bam 8.2 M 0 7.7 M 0.937 SE 28 28 native 0.0 M 5.6 M 5.4 M 0.656 0.97 0.97 29.87 105 1.04 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd94c4fb-00bf-4354-b74f-3501da01c589/@@download/cross_correlation_plot/ENCFF000WJL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACO ENCFF000WJL Illumina Genome Analyzer 2016-10-26T17:36:51.918628+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082J3Q03695YX1xgJBKFF78 ENCSR000EAN https://www.encodeproject.org/experiments/ENCSR000EAN transcription factor RELA-human GM12892 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EAS https://www.encodeproject.org/experiments/ENCSR000EAS control mouse-IgG-control-human GM15510 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF842AKP https://www.encodeproject.org/files/ENCFF842AKP/@@download/ENCFF842AKP.bam ENCFF307THL https://www.encodeproject.org/files/ENCFF307THL/@@download/ENCFF307THL.bam 29.2 M 0 16.4 M 0.562 SE 28 28 native 0.0 M 9.8 M 9.4 M 0.321 0.96 0.96 25.77 105 1.03 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcedd48d-795d-4cad-8d54-e7c1bf2bc156/@@download/cross_correlation_plot/ENCFF000WKI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALP ENCFF000WKI Illumina Genome Analyzer 2016-10-26T17:35:36.444321+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Q6j0369KPb3j15B4p8xx ENCSR000EAS https://www.encodeproject.org/experiments/ENCSR000EAS control mouse-IgG-control-human GM15510 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF034BYM https://www.encodeproject.org/files/ENCFF034BYM/@@download/ENCFF034BYM.bam ENCFF601IYE https://www.encodeproject.org/files/ENCFF601IYE/@@download/ENCFF601IYE.bam 6.1 M 0 5.7 M 0.931 SE 28 28 native 0.0 M 4.0 M 3.9 M 0.637 0.98 0.98 60.67 85 1.02 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ab610cc-6049-4d3e-b2b1-550cbad75d90/@@download/cross_correlation_plot/ENCFF000WJW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUU ENCFF000WJW Illumina Genome Analyzer 2016-10-26T17:34:49.536507+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082QFQ0369F7fQjy59kFj2x ENCSR000EAR https://www.encodeproject.org/experiments/ENCSR000EAR transcription factor POLR2A-human GM15510 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EAP https://www.encodeproject.org/experiments/ENCSR000EAP control rabbit-IgG-control-human GM15510 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF084HQJ https://www.encodeproject.org/files/ENCFF084HQJ/@@download/ENCFF084HQJ.bam ENCFF401QOO https://www.encodeproject.org/files/ENCFF401QOO/@@download/ENCFF401QOO.bam 6.0 M 0 5.8 M 0.959 SE 28 28 native 0.0 M 4.1 M 4.0 M 0.665 0.99 0.99 81.98 115 1.03 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/d04c3c78-8401-47ee-8335-f21edb248cee/@@download/cross_correlation_plot/ENCFF000WKG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACH ENCFF000WKG Illumina Genome Analyzer 2016-10-26T17:36:10.554823+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082ZkQ036923z1QYVBPkqBj ENCSR000EAP https://www.encodeproject.org/experiments/ENCSR000EAP control rabbit-IgG-control-human GM15510 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF661MPU https://www.encodeproject.org/files/ENCFF661MPU/@@download/ENCFF661MPU.bam ENCFF363ORB https://www.encodeproject.org/files/ENCFF363ORB/@@download/ENCFF363ORB.bam 6.9 M 0 6.7 M 0.962 SE 28 28 native 0.0 M 4.7 M 4.6 M 0.664 0.98 0.98 52.52 100 1.02 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a54cfee-c340-4e88-9e6a-20ab9121afdd/@@download/cross_correlation_plot/ENCFF000WKH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAG ENCFF000WKH Illumina Genome Analyzer 2016-10-26T17:36:24.299612+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Zx003695YX1xgJBKFFB1 ENCSR000EAQ https://www.encodeproject.org/experiments/ENCSR000EAQ transcription factor RELA-human GM15510 immortalized cell line michael-snyder ENCODE2 pending SE "28,34" Illumina Genome Analyzer unreviewed ENCSR000EAV https://www.encodeproject.org/experiments/ENCSR000EAV control mouse-IgG-control-human GM18505 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF890LJE https://www.encodeproject.org/files/ENCFF890LJE/@@download/ENCFF890LJE.bam ENCFF737DSB https://www.encodeproject.org/files/ENCFF737DSB/@@download/ENCFF737DSB.bam 5.1 M 0 2.9 M 0.572 SE 28 28 native 0.0 M 1.9 M 1.8 M 0.356 0.96 0.98 43.34 95 1.05 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/008a4c8d-3612-4e37-b16d-817498a95664/@@download/cross_correlation_plot/ENCFF000WLF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUC ENCFF000WLF Illumina Genome Analyzer 2016-10-26T17:36:12.042518+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082f28036923z1QYVBPkqFx ENCSR000EAV https://www.encodeproject.org/experiments/ENCSR000EAV control mouse-IgG-control-human GM18505 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF581JNH https://www.encodeproject.org/files/ENCFF581JNH/@@download/ENCFF581JNH.bam ENCFF786RCZ https://www.encodeproject.org/files/ENCFF786RCZ/@@download/ENCFF786RCZ.bam 7.0 M 0 6.7 M 0.961 SE 28 28 native 0.0 M 4.8 M 4.7 M 0.670 0.97 0.97 37.98 90 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/afd7a4ab-fa12-4883-add9-00ef036ccd46/@@download/cross_correlation_plot/ENCFF000WLC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEF ENCFF000WLC Illumina Genome Analyzer 2016-10-26T17:36:04.779953+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082f600369J2Pxk91P1yFFF ENCSR000EAU https://www.encodeproject.org/experiments/ENCSR000EAU transcription factor POLR2A-human GM18505 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EAT https://www.encodeproject.org/experiments/ENCSR000EAT control rabbit-IgG-control-human GM18505 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF489ZZO https://www.encodeproject.org/files/ENCFF489ZZO/@@download/ENCFF489ZZO.bam ENCFF257PUQ https://www.encodeproject.org/files/ENCFF257PUQ/@@download/ENCFF257PUQ.bam 6.7 M 0 6.4 M 0.966 SE 28 28 native 0.0 M 4.6 M 4.5 M 0.682 0.99 0.99 106.10 85 1.03 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/20e036eb-e727-4afb-a5ce-e019acabd659/@@download/cross_correlation_plot/ENCFF000WLG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHU ENCFF000WLG Illumina Genome Analyzer 2016-10-26T17:37:32.318702+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082F0Q03692g2Q4k5K0j901 ENCSR000EAT https://www.encodeproject.org/experiments/ENCSR000EAT control rabbit-IgG-control-human GM18505 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF460OMS https://www.encodeproject.org/files/ENCFF460OMS/@@download/ENCFF460OMS.bam ENCFF733AQK https://www.encodeproject.org/files/ENCFF733AQK/@@download/ENCFF733AQK.bam 7.8 M 0 7.5 M 0.969 SE 28 28 native 0.0 M 5.4 M 5.3 M 0.686 0.98 0.98 61.27 100 1.02 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/b688066f-61cf-474f-961a-33226f62cc34/@@download/cross_correlation_plot/ENCFF000WLM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHV ENCFF000WLM Illumina Genome Analyzer 2016-10-26T17:37:10.822929+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082F4Q0369GJ6xQfbB7BkVb ENCSR000EAW https://www.encodeproject.org/experiments/ENCSR000EAW transcription factor RELA-human GM18505 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EAZ https://www.encodeproject.org/experiments/ENCSR000EAZ control mouse-IgG-control-human GM18526 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF456DLN https://www.encodeproject.org/files/ENCFF456DLN/@@download/ENCFF456DLN.bam ENCFF496PRM https://www.encodeproject.org/files/ENCFF496PRM/@@download/ENCFF496PRM.bam 5.4 M 0 5.1 M 0.950 SE 28 28 native 0.0 M 3.6 M 3.6 M 0.660 0.99 0.99 72.66 90 1.04 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/31ebbdfa-f4c9-4465-90f1-92e25d3fabc4/@@download/cross_correlation_plot/ENCFF000WMA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAE ENCFF000WMA Illumina Genome Analyzer 2016-10-26T17:37:02.501408+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082JJ003695YX1xgJBKFF81 ENCSR000EAZ https://www.encodeproject.org/experiments/ENCSR000EAZ control mouse-IgG-control-human GM18526 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF229HVL https://www.encodeproject.org/files/ENCFF229HVL/@@download/ENCFF229HVL.bam ENCFF720SQZ https://www.encodeproject.org/files/ENCFF720SQZ/@@download/ENCFF720SQZ.bam 6.7 M 0 6.5 M 0.974 SE 28 28 native 0.0 M 4.6 M 4.6 M 0.681 0.99 0.99 78.80 105 1.04 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/ac83548a-f9c8-4617-9b81-3165e5f9408f/@@download/cross_correlation_plot/ENCFF000WMH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAC ENCFF000WMH Illumina Genome Analyzer 2016-10-26T17:37:11.306191+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082JVj0369FvKVQXxFJj297 ENCSR000EAZ https://www.encodeproject.org/experiments/ENCSR000EAZ control mouse-IgG-control-human GM18526 immortalized cell line 3 michael-snyder ENCODE2 GRCh38 ENCFF184PLT https://www.encodeproject.org/files/ENCFF184PLT/@@download/ENCFF184PLT.bam ENCFF457LVV https://www.encodeproject.org/files/ENCFF457LVV/@@download/ENCFF457LVV.bam 21.0 M 0 20.1 M 0.958 SE 28 28 native 0.0 M 13.7 M 13.4 M 0.639 0.98 0.98 47.35 90 1.04 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/3cd2d3d6-4d43-4d68-b311-64cc0b44e2c7/@@download/cross_correlation_plot/ENCFF000WMM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAD ENCFF000WMM Illumina Genome Analyzer 2016-10-26T17:37:15.977966+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Jf80369PK6yVbxF59b05 ENCSR000EAY https://www.encodeproject.org/experiments/ENCSR000EAY transcription factor POLR2A-human GM18526 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EAX https://www.encodeproject.org/experiments/ENCSR000EAX control rabbit-IgG-control-human GM18526 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF590UNB https://www.encodeproject.org/files/ENCFF590UNB/@@download/ENCFF590UNB.bam ENCFF336EQJ https://www.encodeproject.org/files/ENCFF336EQJ/@@download/ENCFF336EQJ.bam 5.4 M 0 5.2 M 0.956 SE 28 28 native 0.0 M 3.6 M 3.6 M 0.664 0.99 0.99 173.93 110 1.03 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/17f1bd17-4df7-4b45-85c2-0e274bbc467f/@@download/cross_correlation_plot/ENCFF000WMS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEA ENCFF000WMS Illumina Genome Analyzer 2016-10-26T17:37:02.024881+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082F8j0369GJ6xQfbB7BkVy ENCSR000EAX https://www.encodeproject.org/experiments/ENCSR000EAX control rabbit-IgG-control-human GM18526 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF436ULT https://www.encodeproject.org/files/ENCFF436ULT/@@download/ENCFF436ULT.bam ENCFF504LPO https://www.encodeproject.org/files/ENCFF504LPO/@@download/ENCFF504LPO.bam 4.1 M 0 3.6 M 0.874 SE 28 28 native 0.0 M 2.5 M 2.5 M 0.600 0.99 0.99 174.51 110 1.03 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/73a67c64-91a5-4739-b581-f9597f7035b0/@@download/cross_correlation_plot/ENCFF000WMR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARC ENCFF000WMR Illumina Genome Analyzer 2016-10-26T17:37:01.591244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082FKQ03694q32PPxBJ67Q2 ENCSR000EBA https://www.encodeproject.org/experiments/ENCSR000EBA transcription factor RELA-human GM18526 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer no available pipeline ENCSR000EBE https://www.encodeproject.org/experiments/ENCSR000EBE control mouse-IgG-control-human GM18951 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF332PHW https://www.encodeproject.org/files/ENCFF332PHW/@@download/ENCFF332PHW.bam ENCFF283LWS https://www.encodeproject.org/files/ENCFF283LWS/@@download/ENCFF283LWS.bam 22.7 M 0 21.6 M 0.951 SE 28 28 native 0.0 M 15.3 M 14.7 M 0.649 0.96 0.96 28.63 95 1.03 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/946d8851-15bd-4c50-b19b-a1532334aa8b/@@download/cross_correlation_plot/ENCFF000WNP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATH ENCFF000WNP Illumina Genome Analyzer 2016-10-26T17:35:37.924362+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082V680369668063VP6b2kK ENCSR000EBC https://www.encodeproject.org/experiments/ENCSR000EBC transcription factor POLR2A-human GM18951 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EBB https://www.encodeproject.org/experiments/ENCSR000EBB control rabbit-IgG-control-human GM18951 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF300BIT https://www.encodeproject.org/files/ENCFF300BIT/@@download/ENCFF300BIT.bam ENCFF335OIH https://www.encodeproject.org/files/ENCFF335OIH/@@download/ENCFF335OIH.bam 5.7 M 0 5.4 M 0.959 SE 28 28 native 0.0 M 3.9 M 3.8 M 0.678 0.99 0.99 145.51 110 1.03 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/0cc9a012-f9b4-498c-8b4e-7b0d9c5e7604/@@download/cross_correlation_plot/ENCFF000WNS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADG ENCFF000WNS Illumina Genome Analyzer 2016-10-26T17:36:17.977190+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082b1803695YX1xgJBKFFBF ENCSR000EBB https://www.encodeproject.org/experiments/ENCSR000EBB control rabbit-IgG-control-human GM18951 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF644QUM https://www.encodeproject.org/files/ENCFF644QUM/@@download/ENCFF644QUM.bam ENCFF577WKE https://www.encodeproject.org/files/ENCFF577WKE/@@download/ENCFF577WKE.bam 5.2 M 0 4.9 M 0.950 SE 28 28 native 0.0 M 3.5 M 3.5 M 0.672 0.99 0.99 73.05 85 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/6336cb08-8fbc-4be0-af4c-ccaf2f9cb283/@@download/cross_correlation_plot/ENCFF000WNQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJN ENCFF000WNQ Illumina Genome Analyzer 2016-10-26T17:36:16.400504+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082b500369J2Pxk91P1yFBp ENCSR000EBD https://www.encodeproject.org/experiments/ENCSR000EBD transcription factor RELA-human GM18951 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EBH https://www.encodeproject.org/experiments/ENCSR000EBH control mouse-IgG-control-human GM19099 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF845RSV https://www.encodeproject.org/files/ENCFF845RSV/@@download/ENCFF845RSV.bam ENCFF760JDY https://www.encodeproject.org/files/ENCFF760JDY/@@download/ENCFF760JDY.bam 7.6 M 0 7.2 M 0.949 SE 28 28 native 0.0 M 5.1 M 4.8 M 0.626 0.93 0.93 15.10 90 1.05 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/04ca261c-7e99-4af2-a4f9-fbb5a92fbbec/@@download/cross_correlation_plot/ENCFF000WON.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209API ENCFF000WON Illumina Genome Analyzer 2016-10-26T17:34:47.081255+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082QQ00369GJ6xQfbB7BkYF ENCSR000EBH https://www.encodeproject.org/experiments/ENCSR000EBH control mouse-IgG-control-human GM19099 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF632GGK https://www.encodeproject.org/files/ENCFF632GGK/@@download/ENCFF632GGK.bam ENCFF481XFA https://www.encodeproject.org/files/ENCFF481XFA/@@download/ENCFF481XFA.bam 12.9 M 0 12.4 M 0.965 SE 28 28 native 0.0 M 8.8 M 8.6 M 0.664 0.97 0.97 36.83 105 1.03 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/00e2d981-aba9-4cc7-848d-207272764f68/@@download/cross_correlation_plot/ENCFF000WOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABF ENCFF000WOO Illumina Genome Analyzer 2016-10-26T17:34:53.502733+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082QYQ0369BX1xqb1B808q9 ENCSR000EBG https://www.encodeproject.org/experiments/ENCSR000EBG transcription factor POLR2A-human GM19099 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EBF https://www.encodeproject.org/experiments/ENCSR000EBF control rabbit-IgG-control-human GM19099 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF060FBZ https://www.encodeproject.org/files/ENCFF060FBZ/@@download/ENCFF060FBZ.bam ENCFF950YKO https://www.encodeproject.org/files/ENCFF950YKO/@@download/ENCFF950YKO.bam 6.0 M 0 5.7 M 0.959 SE 28 28 native 0.0 M 4.0 M 4.0 M 0.671 0.99 0.99 142.47 110 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/88141767-0e97-47ac-acfe-ce8552c01244/@@download/cross_correlation_plot/ENCFF000WOQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATP ENCFF000WOQ Illumina Genome Analyzer 2016-10-26T17:35:59.767502+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082bk0036923z1QYVBPkqFG ENCSR000EBF https://www.encodeproject.org/experiments/ENCSR000EBF control rabbit-IgG-control-human GM19099 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF475QAG https://www.encodeproject.org/files/ENCFF475QAG/@@download/ENCFF475QAG.bam ENCFF707CXU https://www.encodeproject.org/files/ENCFF707CXU/@@download/ENCFF707CXU.bam 4.6 M 0 4.3 M 0.942 SE 28 28 native 0.0 M 3.0 M 3.0 M 0.649 0.99 0.99 171.96 110 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c707245-ab06-43c1-bc2b-bea6076d6176/@@download/cross_correlation_plot/ENCFF000WOT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANJ ENCFF000WOT Illumina Genome Analyzer 2016-10-26T17:36:19.614621+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082by0036923z1QYVBPkqFZ ENCSR000EBI https://www.encodeproject.org/experiments/ENCSR000EBI transcription factor RELA-human GM19099 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer no available pipeline ENCSR000EBL https://www.encodeproject.org/experiments/ENCSR000EBL control mouse-IgG-control-human GM19193 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF100CXY https://www.encodeproject.org/files/ENCFF100CXY/@@download/ENCFF100CXY.bam ENCFF519AXQ https://www.encodeproject.org/files/ENCFF519AXQ/@@download/ENCFF519AXQ.bam 10.0 M 0 9.4 M 0.939 SE 28 28 native 0.0 M 6.7 M 6.3 M 0.631 0.94 0.94 17.73 90 1.04 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/58d07cf0-83e7-4076-8502-e075a4ab0d73/@@download/cross_correlation_plot/ENCFF000WPQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACR ENCFF000WPQ Illumina Genome Analyzer 2016-10-26T17:36:39.564792+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082JvQ03691jJ0BZ9F19V8Y ENCSR000EBL https://www.encodeproject.org/experiments/ENCSR000EBL control mouse-IgG-control-human GM19193 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF367XZL https://www.encodeproject.org/files/ENCFF367XZL/@@download/ENCFF367XZL.bam ENCFF650JUF https://www.encodeproject.org/files/ENCFF650JUF/@@download/ENCFF650JUF.bam 6.8 M 0 6.5 M 0.952 SE 28 28 native 0.0 M 4.7 M 4.6 M 0.672 0.97 0.97 37.51 85 1.04 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c64b3e0-ee8c-4183-9532-fee03a0d1615/@@download/cross_correlation_plot/ENCFF000WPN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACQ ENCFF000WPN Illumina Genome Analyzer 2016-10-26T17:36:40.481710+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082K2Q0369KPb3j15B4p8qb ENCSR000EBK https://www.encodeproject.org/experiments/ENCSR000EBK transcription factor POLR2A-human GM19193 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EBJ https://www.encodeproject.org/experiments/ENCSR000EBJ control rabbit-IgG-control-human GM19193 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF870ZOV https://www.encodeproject.org/files/ENCFF870ZOV/@@download/ENCFF870ZOV.bam ENCFF646REM https://www.encodeproject.org/files/ENCFF646REM/@@download/ENCFF646REM.bam 5.3 M 0 5.0 M 0.949 SE 28 28 native 0.0 M 3.6 M 3.5 M 0.670 0.99 0.99 111.01 120 1.03 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/11ca91b5-e05a-4d9e-a09b-416b51476929/@@download/cross_correlation_plot/ENCFF000WPT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAV ENCFF000WPT Illumina Genome Analyzer 2016-10-26T17:36:14.525470+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082fv803694VvqYvxK22vG1 ENCSR000EBJ https://www.encodeproject.org/experiments/ENCSR000EBJ control rabbit-IgG-control-human GM19193 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF815ZGR https://www.encodeproject.org/files/ENCFF815ZGR/@@download/ENCFF815ZGR.bam ENCFF021IAB https://www.encodeproject.org/files/ENCFF021IAB/@@download/ENCFF021IAB.bam 6.6 M 0 6.2 M 0.944 SE 28 28 native 0.0 M 4.5 M 4.3 M 0.655 0.97 0.97 29.00 105 1.04 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9af49bf-c5c2-4638-a085-9622b35e3bc6/@@download/cross_correlation_plot/ENCFF000WPV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADJ ENCFF000WPV Illumina Genome Analyzer 2016-10-26T17:36:17.705517+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082g1803691b327zxKB7x6p ENCSR000EBM https://www.encodeproject.org/experiments/ENCSR000EBM transcription factor RELA-human GM19193 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EBQ https://www.encodeproject.org/experiments/ENCSR000EBQ transcription factor BACH1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF517LYO https://www.encodeproject.org/files/ENCFF517LYO/@@download/ENCFF517LYO.bam ENCFF757ZWI https://www.encodeproject.org/files/ENCFF757ZWI/@@download/ENCFF757ZWI.bam 32.0 M 0 30.5 M 0.952 SE 36 36 native 0.0 M 23.8 M 22.4 M 0.699 0.95 0.95 19.33 115 1.07 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/67a74299-03e0-4225-b218-e19aee16870a/@@download/cross_correlation_plot/ENCFF000WQI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQA ENCFF000WQI Illumina Genome Analyzer 2016-12-11T03:05:41.402829+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1642J80369Bxb30J6x5bZBb ENCSR000EBQ https://www.encodeproject.org/experiments/ENCSR000EBQ transcription factor BACH1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF223DHM https://www.encodeproject.org/files/ENCFF223DHM/@@download/ENCFF223DHM.bam ENCFF413XOW https://www.encodeproject.org/files/ENCFF413XOW/@@download/ENCFF413XOW.bam 32.0 M 0 29.6 M 0.927 SE 36 36 native 0.0 M 22.5 M 20.5 M 0.641 0.92 0.92 12.01 120 1.07 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/925f8d3f-fcfa-4008-9901-51fa984c8fb9/@@download/cross_correlation_plot/ENCFF000WQL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQC ENCFF000WQL Illumina Genome Analyzer 2016-12-11T02:56:43.169046+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1642Vj036969X0jJ6p3ffkb ENCSR000EBX https://www.encodeproject.org/experiments/ENCSR000EBX transcription factor BRCA1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF850FEF https://www.encodeproject.org/files/ENCFF850FEF/@@download/ENCFF850FEF.bam ENCFF882HGZ https://www.encodeproject.org/files/ENCFF882HGZ/@@download/ENCFF882HGZ.bam 31.4 M 0 30.4 M 0.968 SE 36 36 native 0.0 M 23.5 M 22.4 M 0.713 0.96 0.96 22.99 125 1.03 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3810334-0b4e-4102-939c-1872525d61e6/@@download/cross_correlation_plot/ENCFF000WQT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHS ENCFF000WQT Illumina Genome Analyzer 2016-12-11T04:04:30.700126+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164yXQ0369KbxV61z4GFvPz ENCSR000EBX https://www.encodeproject.org/experiments/ENCSR000EBX transcription factor BRCA1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF398CZS https://www.encodeproject.org/files/ENCFF398CZS/@@download/ENCFF398CZS.bam ENCFF106HFQ https://www.encodeproject.org/files/ENCFF106HFQ/@@download/ENCFF106HFQ.bam 26.8 M 0 25.7 M 0.959 SE 36 36 native 0.0 M 19.4 M 18.3 M 0.685 0.95 0.95 18.96 110 1.06 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/e43a27f5-7247-4e69-8559-d1947d883ae0/@@download/cross_correlation_plot/ENCFF000WQV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABJ ENCFF000WQV Illumina Genome Analyzer 2016-12-11T04:01:08.973808+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164yg80369BgG8x1ygv1X8z ENCSR000EBV https://www.encodeproject.org/experiments/ENCSR000EBV transcription factor CEBPB-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF212PJG https://www.encodeproject.org/files/ENCFF212PJG/@@download/ENCFF212PJG.bam ENCFF702PMJ https://www.encodeproject.org/files/ENCFF702PMJ/@@download/ENCFF702PMJ.bam 27.2 M 0 26.7 M 0.984 SE 36 36 native 0.0 M 20.4 M 19.2 M 0.707 0.94 0.94 17.29 110 1.13 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/288e7475-4bf5-447b-8cab-587d0f8f26e7/@@download/cross_correlation_plot/ENCFF000WRB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACK ENCFF000WRB Illumina Genome Analyzer 2016-12-11T04:55:46.816946+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16671j03692yykb1zBpz83Y ENCSR000EBV https://www.encodeproject.org/experiments/ENCSR000EBV transcription factor CEBPB-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF506VMG https://www.encodeproject.org/files/ENCFF506VMG/@@download/ENCFF506VMG.bam ENCFF144SYZ https://www.encodeproject.org/files/ENCFF144SYZ/@@download/ENCFF144SYZ.bam 25.4 M 0 24.6 M 0.969 SE 36 36 native 0.0 M 18.5 M 17.9 M 0.704 0.97 0.97 34.69 120 1.08 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/17767eff-58e5-457a-b177-23c41ac04071/@@download/cross_correlation_plot/ENCFF000WRD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALD ENCFF000WRD Illumina Genome Analyzer 2016-12-11T04:55:26.897011+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667780369KbxV61z4GFvx0 ENCSR000EBU https://www.encodeproject.org/experiments/ENCSR000EBU "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF962DWV https://www.encodeproject.org/files/ENCFF962DWV/@@download/ENCFF962DWV.bam ENCFF051TPA https://www.encodeproject.org/files/ENCFF051TPA/@@download/ENCFF051TPA.bam 30.7 M 0 30.1 M 0.980 SE 36 36 native 0.0 M 23.2 M 21.8 M 0.710 0.94 0.94 15.63 110 1.03 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/654563bb-9ec1-4025-bfac-fb51dca5d974/@@download/cross_correlation_plot/ENCFF000WRJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEE ENCFF000WRJ Illumina Genome Analyzer 2016-12-10T21:02:30.715357+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16306003699Z3Y8493qbp56 ENCSR000EBU https://www.encodeproject.org/experiments/ENCSR000EBU "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF607NRH https://www.encodeproject.org/files/ENCFF607NRH/@@download/ENCFF607NRH.bam ENCFF228RNE https://www.encodeproject.org/files/ENCFF228RNE/@@download/ENCFF228RNE.bam 25.6 M 0 24.9 M 0.973 SE 36 36 native 0.0 M 18.2 M 17.8 M 0.694 0.98 0.98 40.24 120 1.03 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/46d2750e-af6d-4fb7-8252-be94b31c3649/@@download/cross_correlation_plot/ENCFF000WRL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADQ ENCFF000WRL Illumina Genome Analyzer 2016-12-10T21:00:31.971487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1630Bj03699Z3Y8493qbp5P ENCSR000EBT https://www.encodeproject.org/experiments/ENCSR000EBT "RNA binding protein,transcription factor" CHD2-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF598TAE https://www.encodeproject.org/files/ENCFF598TAE/@@download/ENCFF598TAE.bam ENCFF603TTS https://www.encodeproject.org/files/ENCFF603TTS/@@download/ENCFF603TTS.bam 31.7 M 0 31.1 M 0.982 SE 36 36 native 0.0 M 23.9 M 23.3 M 0.736 0.98 0.98 59.00 110 1.09 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/324471ac-602a-46c0-97b1-4c8512ade8d0/@@download/cross_correlation_plot/ENCFF000WRQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANW ENCFF000WRQ Illumina Genome Analyzer 2016-12-10T20:26:52.604209+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Xj00369K8k6p8qBf9pvF ENCSR000EBT https://www.encodeproject.org/experiments/ENCSR000EBT "RNA binding protein,transcription factor" CHD2-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF492JIH https://www.encodeproject.org/files/ENCFF492JIH/@@download/ENCFF492JIH.bam ENCFF993BPP https://www.encodeproject.org/files/ENCFF993BPP/@@download/ENCFF993BPP.bam 25.4 M 0 25.1 M 0.990 SE 36 36 native 0.0 M 19.4 M 18.8 M 0.741 0.97 0.97 38.90 125 1.09 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf89287e-a991-478a-a611-0d28dfbd4776/@@download/cross_correlation_plot/ENCFF000WRS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGN ENCFF000WRS Illumina Genome Analyzer 2016-12-10T20:22:48.571334+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Xvj03693JQ1ZJ95zxG3j ENCSR633XNG https://www.encodeproject.org/experiments/ENCSR633XNG control Control-human H1-hESC stem cell 1 michael-snyder ENCODE3 GRCh38 ENCFF828HXP https://www.encodeproject.org/files/ENCFF828HXP/@@download/ENCFF828HXP.bam ENCFF914PQG https://www.encodeproject.org/files/ENCFF914PQG/@@download/ENCFF914PQG.bam 42.5 M 0 41.7 M 0.983 SE 36 None 0.0 M 32.9 M 31.5 M 0.742 0.96 0.96 27.51 95 1.01 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee605c69-8790-4b67-b7d2-ea1dda6aa9b1/@@download/cross_correlation_plot/ENCFF002ECT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB527MZB michael-snyder:Input_H1-hES_Rep1 ENCFF002ECT Illumina Genome Analyzer IIx 2016-05-06T18:08:56.267664+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqVGQ0369GkFPvq42zg1jx ENCSR633XNG https://www.encodeproject.org/experiments/ENCSR633XNG control Control-human H1-hESC stem cell 2 michael-snyder ENCODE3 GRCh38 ENCFF372IUC https://www.encodeproject.org/files/ENCFF372IUC/@@download/ENCFF372IUC.bam ENCFF155SHG https://www.encodeproject.org/files/ENCFF155SHG/@@download/ENCFF155SHG.bam 42.6 M 0 42.1 M 0.986 SE 36 None 0.0 M 33.1 M 32.0 M 0.750 0.97 0.97 35.29 110 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/d358dd6d-36ff-4656-88f3-f401aa60de20/@@download/cross_correlation_plot/ENCFF002ECV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB548QER michael-snyder:Input_H1-hES_Rep2 ENCFF002ECV Illumina Genome Analyzer IIx 2016-05-06T18:08:25.962260+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqVK0036961GyjjQ2QP8f7 ENCSR000EBP https://www.encodeproject.org/experiments/ENCSR000EBP "RNA binding protein,transcription factor" GTF2F1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF358UEX https://www.encodeproject.org/files/ENCFF358UEX/@@download/ENCFF358UEX.bam ENCFF995YFW https://www.encodeproject.org/files/ENCFF995YFW/@@download/ENCFF995YFW.bam 31.2 M 0 30.0 M 0.961 SE 36 36 native 0.0 M 22.5 M 22.1 M 0.706 0.98 0.98 49.94 90 1.03 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/716f7f41-dc64-4de3-9ff6-b984a88cfa93/@@download/cross_correlation_plot/ENCFF000WSQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOO ENCFF000WSQ Illumina Genome Analyzer 2016-12-11T04:30:02.826257+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165VV803697yz601ypVJ3fb ENCSR000EBP https://www.encodeproject.org/experiments/ENCSR000EBP "RNA binding protein,transcription factor" GTF2F1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF484ZQH https://www.encodeproject.org/files/ENCFF484ZQH/@@download/ENCFF484ZQH.bam ENCFF760ZDJ https://www.encodeproject.org/files/ENCFF760ZDJ/@@download/ENCFF760ZDJ.bam 23.7 M 0 22.7 M 0.961 SE 36 36 native 0.0 M 17.5 M 16.3 M 0.691 0.93 0.93 14.72 110 1.04 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/09aa43e6-934a-4b0d-9e8a-ab12ba460614/@@download/cross_correlation_plot/ENCFF000WSS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AON ENCFF000WSS Illumina Genome Analyzer 2016-12-11T04:24:43.772200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Vf00369BJyPz9fb9qYG1 ENCSR000ECA https://www.encodeproject.org/experiments/ENCSR000ECA transcription factor JUN-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF864PHP https://www.encodeproject.org/files/ENCFF864PHP/@@download/ENCFF864PHP.bam ENCFF233HJU https://www.encodeproject.org/files/ENCFF233HJU/@@download/ENCFF233HJU.bam 31.4 M 0 27.1 M 0.863 SE 36 36 native 0.0 M 20.6 M 17.0 M 0.540 0.82 0.82 5.16 120 1.05 2.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/e865819f-187e-484f-9ba3-c7a6662963b8/@@download/cross_correlation_plot/ENCFF000WSW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQH ENCFF000WSW Illumina Genome Analyzer 2016-12-11T02:32:57.776282+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163qgj03697vfpg2qKbyZJk ENCSR000ECA https://www.encodeproject.org/experiments/ENCSR000ECA transcription factor JUN-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF050VGU https://www.encodeproject.org/files/ENCFF050VGU/@@download/ENCFF050VGU.bam ENCFF700FWX https://www.encodeproject.org/files/ENCFF700FWX/@@download/ENCFF700FWX.bam 32.8 M 0 28.4 M 0.866 SE 36 36 native 0.0 M 21.7 M 19.0 M 0.582 0.88 0.88 7.85 110 1.04 2.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/55cf4001-4aa2-4b47-90e6-b7f5d9ade233/@@download/cross_correlation_plot/ENCFF000WSV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKZ ENCFF000WSV Illumina Genome Analyzer 2016-12-11T02:30:20.602942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163qvQ03692pJ09J76g5g2b ENCSR000EBZ https://www.encodeproject.org/experiments/ENCSR000EBZ transcription factor JUND-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF460PKZ https://www.encodeproject.org/files/ENCFF460PKZ/@@download/ENCFF460PKZ.bam ENCFF168FJY https://www.encodeproject.org/files/ENCFF168FJY/@@download/ENCFF168FJY.bam 31.0 M 0 30.2 M 0.973 SE 36 36 native 0.0 M 22.9 M 21.6 M 0.697 0.95 0.95 20.72 120 1.09 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/c617a89e-6f3e-4e2a-a62c-9cbff0f6ff50/@@download/cross_correlation_plot/ENCFF000WTF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKA ENCFF000WTF Illumina Genome Analyzer 2016-12-10T18:59:50.124452+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162JjQ03697yz601ypVJ363 ENCSR000EBZ https://www.encodeproject.org/experiments/ENCSR000EBZ transcription factor JUND-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF963DAM https://www.encodeproject.org/files/ENCFF963DAM/@@download/ENCFF963DAM.bam ENCFF568WZX https://www.encodeproject.org/files/ENCFF568WZX/@@download/ENCFF568WZX.bam 30.7 M 0 29.2 M 0.952 SE 36 36 native 0.0 M 22.7 M 19.9 M 0.650 0.88 0.88 8.15 120 1.06 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/c527c496-981c-4f59-a725-787e91985744/@@download/cross_correlation_plot/ENCFF000WTH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUY ENCFF000WTH Illumina Genome Analyzer 2016-12-10T18:57:01.376416+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162JxQ036933PVVJ7Qq015f ENCSR000EBS https://www.encodeproject.org/experiments/ENCSR000EBS transcription factor MAFK-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF552FKA https://www.encodeproject.org/files/ENCFF552FKA/@@download/ENCFF552FKA.bam ENCFF702RBI https://www.encodeproject.org/files/ENCFF702RBI/@@download/ENCFF702RBI.bam 30.1 M 0 29.1 M 0.968 SE 36 36 native 0.0 M 23.0 M 19.2 M 0.638 0.83 0.83 5.80 150 1.09 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe228886-5c45-47e6-9d5b-02968fcd6a59/@@download/cross_correlation_plot/ENCFF000WTN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUH ENCFF000WTN Illumina Genome Analyzer 2016-10-09T17:02:02.354390+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Pk80jv1vY92b0GYjVG4z ENCSR000EBS https://www.encodeproject.org/experiments/ENCSR000EBS transcription factor MAFK-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF641ONS https://www.encodeproject.org/files/ENCFF641ONS/@@download/ENCFF641ONS.bam ENCFF592QNK https://www.encodeproject.org/files/ENCFF592QNK/@@download/ENCFF592QNK.bam 26.2 M 0 25.3 M 0.966 SE 36 36 native 0.0 M 19.3 M 18.1 M 0.689 0.94 0.94 15.93 100 1.12 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/448d92bc-df67-4e63-9095-0a7813cdbe26/@@download/cross_correlation_plot/ENCFF000WTQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUG ENCFF000WTQ Illumina Genome Analyzer 2016-10-09T17:01:56.247476+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Ppj0jv1vY92b0GYjVG57 ENCSR000EBR https://www.encodeproject.org/experiments/ENCSR000EBR transcription factor MXI1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF995WDJ https://www.encodeproject.org/files/ENCFF995WDJ/@@download/ENCFF995WDJ.bam ENCFF938AXA https://www.encodeproject.org/files/ENCFF938AXA/@@download/ENCFF938AXA.bam 33.8 M 0 32.5 M 0.959 SE 36 36 native 0.0 M 24.7 M 24.0 M 0.709 0.97 0.97 36.51 90 1.03 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f9ae6f6-5036-4ca7-99b6-af37862be2d5/@@download/cross_correlation_plot/ENCFF000WUC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMY ENCFF000WUC Illumina Genome Analyzer 2016-12-11T04:47:39.443204+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165xQ00369BgG8x1ygv1XXj ENCSR000EBR https://www.encodeproject.org/experiments/ENCSR000EBR transcription factor MXI1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF177BJF https://www.encodeproject.org/files/ENCFF177BJF/@@download/ENCFF177BJF.bam ENCFF355DJV https://www.encodeproject.org/files/ENCFF355DJV/@@download/ENCFF355DJV.bam 28.0 M 0 27.2 M 0.973 SE 36 36 native 0.0 M 20.8 M 19.5 M 0.698 0.94 0.94 15.79 110 1.05 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/a231e545-9e28-4f01-9e71-7f143b94e1aa/@@download/cross_correlation_plot/ENCFF000WUE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMZ ENCFF000WUE Illumina Genome Analyzer 2016-12-11T04:44:18.958560+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165xZj0369BgG8x1ygv1XY2 ENCSR000EBY https://www.encodeproject.org/experiments/ENCSR000EBY transcription factor MYC-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF503VEU https://www.encodeproject.org/files/ENCFF503VEU/@@download/ENCFF503VEU.bam ENCFF704ENS https://www.encodeproject.org/files/ENCFF704ENS/@@download/ENCFF704ENS.bam 30.2 M 0 28.2 M 0.934 SE 36 36 native 0.0 M 21.6 M 17.4 M 0.576 0.81 0.80 4.81 110 1.06 2.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/344140ad-3446-4a64-8fbd-cb9e709a37f3/@@download/cross_correlation_plot/ENCFF000WSD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEO ENCFF000WSD Illumina Genome Analyzer 2016-12-11T02:30:14.065255+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163vbj03692BKq0F3V3jFYQ ENCSR000EBY https://www.encodeproject.org/experiments/ENCSR000EBY transcription factor MYC-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF705LAV https://www.encodeproject.org/files/ENCFF705LAV/@@download/ENCFF705LAV.bam ENCFF522IHE https://www.encodeproject.org/files/ENCFF522IHE/@@download/ENCFF522IHE.bam 33.3 M 0 31.4 M 0.942 SE 36 36 native 0.0 M 24.3 M 21.6 M 0.648 0.90 0.89 9.21 110 1.04 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/98e9089c-a434-4b53-8bb1-defe6c902e57/@@download/cross_correlation_plot/ENCFF000WSF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEM ENCFF000WSF Illumina Genome Analyzer 2016-12-11T02:40:38.604390+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163vq803699Z3Y8493qbpz0 ENCSR000ECC https://www.encodeproject.org/experiments/ENCSR000ECC transcription factor NRF1-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF060DJH https://www.encodeproject.org/files/ENCFF060DJH/@@download/ENCFF060DJH.bam ENCFF744FCP https://www.encodeproject.org/files/ENCFF744FCP/@@download/ENCFF744FCP.bam 32.1 M 0 27.3 M 0.850 SE 36 36 native 0.0 M 20.9 M 18.3 M 0.571 0.88 0.88 7.91 110 1.07 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d47f5e93-fdd2-4532-8350-af9c1f5f4c6f/@@download/cross_correlation_plot/ENCFF000WUR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAP ENCFF000WUR Illumina Genome Analyzer 2016-12-12T17:21:09.109362+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1623v0036933PVVJ7Qq0138 ENCSR000ECC https://www.encodeproject.org/experiments/ENCSR000ECC transcription factor NRF1-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF100HXA https://www.encodeproject.org/files/ENCFF100HXA/@@download/ENCFF100HXA.bam ENCFF649EVF https://www.encodeproject.org/files/ENCFF649EVF/@@download/ENCFF649EVF.bam 37.1 M 0 32.6 M 0.879 SE 36 36 native 0.0 M 24.4 M 22.1 M 0.596 0.91 0.91 10.45 110 1.08 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/cbdaa37f-ba89-4ba4-8ec3-1796aeb547af/@@download/cross_correlation_plot/ENCFF000WUS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAI ENCFF000WUS Illumina Genome Analyzer 2016-12-12T17:21:22.895221+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16240803690xXYVJ7Fj2bkQ ENCSR000ECG https://www.encodeproject.org/experiments/ENCSR000ECG control rabbit-IgG-control-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF513EWK https://www.encodeproject.org/files/ENCFF513EWK/@@download/ENCFF513EWK.bam ENCFF722SGB https://www.encodeproject.org/files/ENCFF722SGB/@@download/ENCFF722SGB.bam 56.9 M 0 49.2 M 0.865 SE 36 36 native 0.0 M 36.6 M 31.6 M 0.556 0.87 0.87 7.97 90 1.02 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b65e7eb-96d3-470c-a678-315e1004037b/@@download/cross_correlation_plot/ENCFF000WUI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB674MWE ENCFF000WUI Illumina Genome Analyzer 2016-10-29T18:04:18.315513+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xyKj0jv1Xg2Q4k5K0k5YJ ENCSR000ECE https://www.encodeproject.org/experiments/ENCSR000ECE transcription factor RAD21-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF664OEO https://www.encodeproject.org/files/ENCFF664OEO/@@download/ENCFF664OEO.bam ENCFF471VXI https://www.encodeproject.org/files/ENCFF471VXI/@@download/ENCFF471VXI.bam 24.9 M 0 21.5 M 0.862 SE 36 36 native 0.0 M 16.4 M 15.7 M 0.629 0.95 0.96 25.58 115 1.82 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/11fd647e-da62-4596-ba68-b15382cc4ad3/@@download/cross_correlation_plot/ENCFF000WUT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATF ENCFF000WUT Illumina Genome Analyzer 2016-12-11T02:28:24.732772+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163xg803697K4B1J71pxzvy ENCSR000ECE https://www.encodeproject.org/experiments/ENCSR000ECE transcription factor RAD21-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF025KWT https://www.encodeproject.org/files/ENCFF025KWT/@@download/ENCFF025KWT.bam ENCFF350SMK https://www.encodeproject.org/files/ENCFF350SMK/@@download/ENCFF350SMK.bam 29.9 M 0 27.8 M 0.932 SE 36 36 native 0.0 M 22.0 M 19.9 M 0.665 0.90 0.92 15.26 120 2.44 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbba1f48-db35-498d-bec7-18f56c96367f/@@download/cross_correlation_plot/ENCFF000WUU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATG ENCFF000WUU Illumina Genome Analyzer 2016-12-11T02:35:48.844902+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163xvQ03695yqvv8q311QK9 ENCSR000ECF https://www.encodeproject.org/experiments/ENCSR000ECF transcription factor RFX5-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF471WJE https://www.encodeproject.org/files/ENCFF471WJE/@@download/ENCFF471WJE.bam ENCFF539UVI https://www.encodeproject.org/files/ENCFF539UVI/@@download/ENCFF539UVI.bam 28.1 M 0 23.3 M 0.829 SE 36 36 native 0.0 M 17.5 M 16.4 M 0.582 0.94 0.94 16.59 120 1.05 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5080bc6-b364-4257-8b12-ae596a1f2ba7/@@download/cross_correlation_plot/ENCFF000WVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFJ ENCFF000WVQ Illumina Genome Analyzer 2016-12-10T20:39:59.844577+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162bxj03699Z3Y8493qbp2p ENCSR000ECF https://www.encodeproject.org/experiments/ENCSR000ECF transcription factor RFX5-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF259GVS https://www.encodeproject.org/files/ENCFF259GVS/@@download/ENCFF259GVS.bam ENCFF518KLK https://www.encodeproject.org/files/ENCFF518KLK/@@download/ENCFF518KLK.bam 41.8 M 0 37.7 M 0.901 SE 36 36 native 0.0 M 28.3 M 26.5 M 0.632 0.94 0.94 18.37 135 1.06 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d364656-6cf3-4f15-88f3-1103fdea7aca/@@download/cross_correlation_plot/ENCFF000WVR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADR ENCFF000WVR Illumina Genome Analyzer 2016-12-10T20:49:12.024797+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162f3003697K4B1J71pxzXj ENCSR000EBO https://www.encodeproject.org/experiments/ENCSR000EBO transcription factor SIN3A-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF842TOK https://www.encodeproject.org/files/ENCFF842TOK/@@download/ENCFF842TOK.bam ENCFF145JNZ https://www.encodeproject.org/files/ENCFF145JNZ/@@download/ENCFF145JNZ.bam 31.8 M 0 31.0 M 0.973 SE 36 36 native 0.0 M 24.2 M 23.5 M 0.737 0.97 0.97 34.79 110 1.10 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/6472dc55-ece1-4dbb-a70a-df701761904a/@@download/cross_correlation_plot/ENCFF000WVE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIK ENCFF000WVE Illumina Genome Analyzer 2016-12-11T03:57:15.892247+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164kG003697yz601ypVJ3P3 ENCSR000EBO https://www.encodeproject.org/experiments/ENCSR000EBO transcription factor SIN3A-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF018COR https://www.encodeproject.org/files/ENCFF018COR/@@download/ENCFF018COR.bam ENCFF217OHF https://www.encodeproject.org/files/ENCFF217OHF/@@download/ENCFF217OHF.bam 32.2 M 0 31.2 M 0.969 SE 36 36 native 0.0 M 24.0 M 22.9 M 0.712 0.96 0.96 22.56 90 1.10 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/959eda8e-760c-452a-84e0-cb2e8dde7cf9/@@download/cross_correlation_plot/ENCFF000WVG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABB ENCFF000WVG Illumina Genome Analyzer 2016-12-11T03:56:28.314381+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164kQj0369GF0YB1zjPf6g6 ENCSR000ECB https://www.encodeproject.org/experiments/ENCSR000ECB transcription factor TBP-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF814NIM https://www.encodeproject.org/files/ENCFF814NIM/@@download/ENCFF814NIM.bam ENCFF904SVM https://www.encodeproject.org/files/ENCFF904SVM/@@download/ENCFF904SVM.bam 33.0 M 0 29.9 M 0.906 SE 36 36 native 0.0 M 21.9 M 20.1 M 0.610 0.93 0.96 25.69 130 1.30 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f78db6f-e4dc-4729-a5b6-481f85751736/@@download/cross_correlation_plot/ENCFF000WWI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGQ ENCFF000WWI Illumina Genome Analyzer 2016-12-11T03:59:07.020746+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164x8003692pJ09J76g5g6B ENCSR000ECB https://www.encodeproject.org/experiments/ENCSR000ECB transcription factor TBP-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF111DMT https://www.encodeproject.org/files/ENCFF111DMT/@@download/ENCFF111DMT.bam ENCFF906DLE https://www.encodeproject.org/files/ENCFF906DLE/@@download/ENCFF906DLE.bam 30.1 M 0 24.9 M 0.829 SE 36 36 native 0.0 M 18.6 M 16.7 M 0.555 0.91 0.92 12.89 155 1.20 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/617bfd93-673a-417a-940e-a9698ece1038/@@download/cross_correlation_plot/ENCFF000WWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVE ENCFF000WWK Illumina Genome Analyzer 2016-12-11T03:56:44.110611+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164xGQ0369GF0YB1zjPf6jP ENCSR000ECD https://www.encodeproject.org/experiments/ENCSR000ECD transcription factor USF2-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF992YZZ https://www.encodeproject.org/files/ENCFF992YZZ/@@download/ENCFF992YZZ.bam ENCFF231PNQ https://www.encodeproject.org/files/ENCFF231PNQ/@@download/ENCFF231PNQ.bam 33.3 M 0 30.5 M 0.914 SE 36 36 native 0.0 M 22.8 M 22.4 M 0.671 0.98 0.98 58.51 110 1.06 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/c69046e1-2252-4208-a0ae-76ce2625380d/@@download/cross_correlation_plot/ENCFF000WWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHB ENCFF000WWJ Illumina Genome Analyzer 2016-12-11T04:17:58.686427+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165FV8036993F1b953B4Q59 ENCSR000ECD https://www.encodeproject.org/experiments/ENCSR000ECD transcription factor USF2-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF420VTB https://www.encodeproject.org/files/ENCFF420VTB/@@download/ENCFF420VTB.bam ENCFF911KLJ https://www.encodeproject.org/files/ENCFF911KLJ/@@download/ENCFF911KLJ.bam 42.7 M 0 38.5 M 0.901 SE 36 36 native 0.0 M 28.4 M 27.1 M 0.636 0.96 0.96 24.87 120 1.07 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/e75c1252-3065-4e4f-b89b-2888545e8fab/@@download/cross_correlation_plot/ENCFF000WWS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGP ENCFF000WWS Illumina Genome Analyzer 2016-12-11T04:30:46.024417+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Fbj0369BJyPz9fb9qYB5 ENCSR000EBW https://www.encodeproject.org/experiments/ENCSR000EBW transcription factor ZNF143-human H1-hESC stem cell 1 michael-snyder ENCODE2 GRCh38 ENCFF016NAV https://www.encodeproject.org/files/ENCFF016NAV/@@download/ENCFF016NAV.bam ENCFF311VXK https://www.encodeproject.org/files/ENCFF311VXK/@@download/ENCFF311VXK.bam 32.1 M 0 31.1 M 0.969 SE 36 36 native 0.0 M 23.4 M 22.4 M 0.699 0.96 0.97 40.41 110 1.24 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/72ed4843-a454-4362-8429-ea93e8c8f1da/@@download/cross_correlation_plot/ENCFF000WWC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIM ENCFF000WWC Illumina Genome Analyzer 2016-12-11T03:38:01.194712+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164bqQ036933PVVJ7Qq01Zg ENCSR000EBW https://www.encodeproject.org/experiments/ENCSR000EBW transcription factor ZNF143-human H1-hESC stem cell 2 michael-snyder ENCODE2 GRCh38 ENCFF732IVC https://www.encodeproject.org/files/ENCFF732IVC/@@download/ENCFF732IVC.bam ENCFF537OYL https://www.encodeproject.org/files/ENCFF537OYL/@@download/ENCFF537OYL.bam 30.3 M 0 29.4 M 0.969 SE 36 36 native 0.0 M 21.8 M 20.7 M 0.685 0.95 0.96 27.72 110 1.23 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0d1d9e5-e16f-4861-96a8-2b2b3fccde12/@@download/cross_correlation_plot/ENCFF000WWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABL ENCFF000WWE Illumina Genome Analyzer 2016-12-11T03:36:23.532158+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164f0003692yykb1zBpz7g3 ENCSR035ELI https://www.encodeproject.org/experiments/ENCSR035ELI control Control-human heart left ventricle tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF925AMH https://www.encodeproject.org/files/ENCFF925AMH/@@download/ENCFF925AMH.bam ENCFF791BFN https://www.encodeproject.org/files/ENCFF791BFN/@@download/ENCFF791BFN.bam 110.3 M 0 108.3 M 0.981 PE 100 100 native 47.7 M 0.0 M 32.5 M 0.589 0.73 0.73 3.69 170 1.07 9.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/759b21b6-009e-471a-8066-36a32508ebb0/@@download/cross_correlation_plot/ENCFF315PYUENCFF528TFO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285OQA michael-snyder:L-3221 "ENCFF528TFO,ENCFF315PYU" HiSeq 4000 2017-01-27T06:30:36.455223+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Xyj0369P8ygG5ZVzbbXP ENCSR689CZH https://www.encodeproject.org/experiments/ENCSR689CZH control Control-human heart left ventricle tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF405SDZ https://www.encodeproject.org/files/ENCFF405SDZ/@@download/ENCFF405SDZ.bam ENCFF101KNE https://www.encodeproject.org/files/ENCFF101KNE/@@download/ENCFF101KNE.bam 74.6 M 0 73.0 M 0.978 PE 100 100 native 32.1 M 0.0 M 26.0 M 0.697 0.82 0.82 5.35 170 1.08 13.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/5beb1fb2-744f-47d1-b7ac-65c9b3383f63/@@download/cross_correlation_plot/ENCFF633HXGENCFF886BMC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB481FWK michael-snyder:L-3223 "ENCFF886BMC,ENCFF633HXG" HiSeq 4000 2017-01-27T06:24:36.215356+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Y900369FB2f75bZ9Qz8y ENCSR544APK https://www.encodeproject.org/experiments/ENCSR544APK "transcription factor,RNA binding protein" CTCF-human heart left ventricle tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF775TBT https://www.encodeproject.org/files/ENCFF775TBT/@@download/ENCFF775TBT.bam ENCFF894PNA https://www.encodeproject.org/files/ENCFF894PNA/@@download/ENCFF894PNA.bam 91.7 M 0 89.8 M 0.979 PE 100 100 native 40.3 M 0.0 M 21.0 M 0.457 0.52 0.50 1.86 200 2.27 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/50991f3c-3885-46e3-aaa1-088e02e21ec2/@@download/cross_correlation_plot/ENCFF184WLGENCFF205RPZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB249FEE michael-snyder:L-3220 "ENCFF205RPZ,ENCFF184WLG" HiSeq 4000 2017-01-27T06:28:38.927438+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Y4003690Y3fv13Vv45v9 ENCSR791AYW https://www.encodeproject.org/experiments/ENCSR791AYW "transcription factor,RNA binding protein" CTCF-human heart left ventricle tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF496WKU https://www.encodeproject.org/files/ENCFF496WKU/@@download/ENCFF496WKU.bam ENCFF200MZP https://www.encodeproject.org/files/ENCFF200MZP/@@download/ENCFF200MZP.bam 96.8 M 0 93.4 M 0.965 PE 100 100 native 42.0 M 0.0 M 20.5 M 0.423 0.49 0.46 1.71 180 2.00 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/dde05195-714c-46dd-9f0d-ad2113ba3c04/@@download/cross_correlation_plot/ENCFF032PDBENCFF632WAT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB303UFA michael-snyder:L-3222 "ENCFF632WAT,ENCFF032PDB" HiSeq 4000 2017-01-27T06:24:35.331134+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253YK80369FYfK85ZjQ3zkz ENCSR336YRS https://www.encodeproject.org/experiments/ENCSR336YRS transcription factor POLR2A-human heart left ventricle tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF457YWN https://www.encodeproject.org/files/ENCFF457YWN/@@download/ENCFF457YWN.bam ENCFF157JAN https://www.encodeproject.org/files/ENCFF157JAN/@@download/ENCFF157JAN.bam 90.5 M 0 81.3 M 0.899 PE 100 100 native 36.3 M 0.0 M 20.5 M 0.452 0.57 0.55 2.11 195 1.34 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee5c747f-4141-40e4-a610-150ae8e6940b/@@download/cross_correlation_plot/ENCFF999VOHENCFF435KUB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB656NON michael-snyder:L-3292 "ENCFF435KUB,ENCFF999VOH" HiSeq 4000 2017-03-13T17:26:13.868624+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30qv900369206696YqV15Gq ENCSR699ZGH https://www.encodeproject.org/experiments/ENCSR699ZGH transcription factor POLR2A-human heart left ventricle tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF269UFJ https://www.encodeproject.org/files/ENCFF269UFJ/@@download/ENCFF269UFJ.bam ENCFF043IWY https://www.encodeproject.org/files/ENCFF043IWY/@@download/ENCFF043IWY.bam 101.5 M 0 95.9 M 0.944 PE 100 100 native 40.1 M 0.0 M 29.5 M 0.582 0.74 0.73 3.54 170 1.09 12.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/c86ac86f-299a-401e-a089-4107ed8c7c9a/@@download/cross_correlation_plot/ENCFF791UGBENCFF254TVF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB264SZU michael-snyder:L-3338 "ENCFF254TVF,ENCFF791UGB" HiSeq 4000 2017-03-13T17:27:38.537352+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30qq0j03699Jfj61zZjY0zk ENCSR007GUS https://www.encodeproject.org/experiments/ENCSR007GUS control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF307JRV https://www.encodeproject.org/files/ENCFF307JRV/@@download/ENCFF307JRV.bam ENCFF645TSL https://www.encodeproject.org/files/ENCFF645TSL/@@download/ENCFF645TSL.bam 53.7 M 0 52.3 M 0.975 PE 101 101 native 22.7 M 0.0 M 22.3 M 0.831 0.99 0.99 75.04 200 1.07 3.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/b2d0d7a6-6f35-4cbb-99b4-92aec3a99366/@@download/cross_correlation_plot/ENCFF873ZZUENCFF611URR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB581JXH michael-snyder:HEK_eGFP-CTCF_FRT_ChIP_LC "ENCFF611URR,ENCFF873ZZU" HiSeq 2000 2016-08-13T23:46:32.338403+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5X1j03696k6PjpZ95F7PP ENCSR049NDP https://www.encodeproject.org/experiments/ENCSR049NDP control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF349AUS https://www.encodeproject.org/files/ENCFF349AUS/@@download/ENCFF349AUS.bam ENCFF297IVV https://www.encodeproject.org/files/ENCFF297IVV/@@download/ENCFF297IVV.bam 72.2 M 0 70.2 M 0.973 PE 101 101 native 30.3 M 0.0 M 29.8 M 0.826 0.99 0.99 68.24 205 1.06 3.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/7dbef9e3-c061-49cf-86a5-42dac21e3d22/@@download/cross_correlation_plot/ENCFF055BVMENCFF502LCH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB278GJK michael-snyder:HEK_eGFP-ZNF572_FRT_ChIP_LC1 "ENCFF502LCH,ENCFF055BVM" HiSeq 2000 2016-09-11T03:19:06.770462+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q21003698GBQPfZ4kg8j9 ENCSR110ZVM https://www.encodeproject.org/experiments/ENCSR110ZVM control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF912ENJ https://www.encodeproject.org/files/ENCFF912ENJ/@@download/ENCFF912ENJ.bam ENCFF619JNV https://www.encodeproject.org/files/ENCFF619JNV/@@download/ENCFF619JNV.bam 64.0 M 0 62.6 M 0.978 PE 101 101 native 27.4 M 0.0 M 26.0 M 0.814 0.96 0.96 26.35 210 1.06 4.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/80daaf15-7448-4919-acce-c36526573dee/@@download/cross_correlation_plot/ENCFF643PJMENCFF089HUB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB240IEM michael-snyder:HEK_eGFP-ZNF264_FRT_ChIP_LC1 "ENCFF089HUB,ENCFF643PJM" HiSeq 2000 2016-09-11T03:18:14.012954+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q2V0036990pj4q988fbb4 ENCSR123TVS https://www.encodeproject.org/experiments/ENCSR123TVS control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF541HQC https://www.encodeproject.org/files/ENCFF541HQC/@@download/ENCFF541HQC.bam ENCFF528VJN https://www.encodeproject.org/files/ENCFF528VJN/@@download/ENCFF528VJN.bam 60.1 M 0 58.7 M 0.978 PE 101 101 native 25.5 M 0.0 M 24.8 M 0.824 0.98 0.98 45.58 205 1.07 4.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd5f2dd2-a4ec-43fc-ad9d-7c82ee0823bd/@@download/cross_correlation_plot/ENCFF643OCIENCFF010LOC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB453PDK michael-snyder:HEK_eGFP-ZFP62_FRT_ChIP_LC "ENCFF643OCI,ENCFF010LOC" HiSeq 2000 2016-08-13T23:47:40.620539+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5VzQ0369P08VgfZ96gVpP ENCSR157LMX https://www.encodeproject.org/experiments/ENCSR157LMX control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF370HPX https://www.encodeproject.org/files/ENCFF370HPX/@@download/ENCFF370HPX.bam ENCFF045OVA https://www.encodeproject.org/files/ENCFF045OVA/@@download/ENCFF045OVA.bam 88.9 M 0 86.0 M 0.967 PE 101 101 native 37.0 M 0.0 M 34.9 M 0.785 0.96 0.96 26.74 205 1.05 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/85a0dccc-093d-42c8-9b5c-a213aacfe847/@@download/cross_correlation_plot/ENCFF557HNGENCFF453HUS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB234VXS michael-snyder:HEK_eGFP-ZEB2_FRT_ChIP_LC "ENCFF557HNG,ENCFF453HUS" HiSeq 4000 2016-08-13T23:41:35.523968+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5XVQ0369BXgbKbj97Jv77 ENCSR236FPN https://www.encodeproject.org/experiments/ENCSR236FPN control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF720PHL https://www.encodeproject.org/files/ENCFF720PHL/@@download/ENCFF720PHL.bam ENCFF936VJO https://www.encodeproject.org/files/ENCFF936VJO/@@download/ENCFF936VJO.bam 68.2 M 0 66.9 M 0.981 PE 101 101 native 29.2 M 0.0 M 27.8 M 0.816 0.97 0.97 35.94 205 1.07 4.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/4db2d1ee-d10c-42e6-91a3-636d4aabb065/@@download/cross_correlation_plot/ENCFF612YLDENCFF212MYS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB234VXS michael-snyder:HEK_eGFP-ZEB2_FRT_ChIP_LC "ENCFF212MYS,ENCFF612YLD" HiSeq 2000 2016-08-13T23:49:41.454326+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5Vk00369Gyv30jj89kqJb ENCSR260MAS https://www.encodeproject.org/experiments/ENCSR260MAS control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF015LOP https://www.encodeproject.org/files/ENCFF015LOP/@@download/ENCFF015LOP.bam ENCFF995GXI https://www.encodeproject.org/files/ENCFF995GXI/@@download/ENCFF995GXI.bam 70.4 M 0 68.7 M 0.975 PE 101 101 native 29.8 M 0.0 M 29.1 M 0.826 0.98 0.98 55.40 210 1.06 3.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/c43eb5ab-b4d2-489d-87e4-8ff03c61b6ed/@@download/cross_correlation_plot/ENCFF794JULENCFF674OUR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB045CDZ michael-snyder:HEK_eGFP-ZBTB1_FRT_ChIP_LC1 "ENCFF794JUL,ENCFF674OUR" HiSeq 2000 2016-09-11T03:18:17.135826+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q28Q03698GBQPfZ4kg8jY ENCSR274OGE https://www.encodeproject.org/experiments/ENCSR274OGE control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF058AVH https://www.encodeproject.org/files/ENCFF058AVH/@@download/ENCFF058AVH.bam ENCFF348IEF https://www.encodeproject.org/files/ENCFF348IEF/@@download/ENCFF348IEF.bam 83.0 M 0 79.5 M 0.959 PE 101 101 native 34.2 M 0.0 M 33.2 M 0.801 0.98 0.98 41.68 205 1.05 3.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/96d31dcd-1487-4374-853e-3364d75b8a0c/@@download/cross_correlation_plot/ENCFF196VCRENCFF173EDE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB581JXH michael-snyder:HEK_eGFP-CTCF_FRT_ChIP_LC "ENCFF173EDE,ENCFF196VCR" HiSeq 4000 2016-08-13T23:47:50.360940+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5Vq80369G3fy7kZ93J1G7 ENCSR278MZO https://www.encodeproject.org/experiments/ENCSR278MZO control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF780ZXF https://www.encodeproject.org/files/ENCFF780ZXF/@@download/ENCFF780ZXF.bam ENCFF453LJV https://www.encodeproject.org/files/ENCFF453LJV/@@download/ENCFF453LJV.bam 60.5 M 0 59.3 M 0.980 PE 101 101 native 26.0 M 0.0 M 25.3 M 0.836 0.98 0.98 50.36 210 1.07 4.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/3bc1d5bb-bd6e-407b-8000-6a60d64ef29c/@@download/cross_correlation_plot/ENCFF881MQWENCFF231MWC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB710TMH michael-snyder:HEK_eGFP-SALL4_FRT_ChIP_LC1 "ENCFF881MQW,ENCFF231MWC" HiSeq 2000 2016-09-11T03:17:45.070792+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q35Q0369F1Xf4jx84YbkZ ENCSR311DYU https://www.encodeproject.org/experiments/ENCSR311DYU control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF581EMT https://www.encodeproject.org/files/ENCFF581EMT/@@download/ENCFF581EMT.bam ENCFF648FLA https://www.encodeproject.org/files/ENCFF648FLA/@@download/ENCFF648FLA.bam 62.1 M 0 60.3 M 0.972 PE 101 101 native 26.0 M 0.0 M 25.4 M 0.818 0.98 0.98 53.66 205 1.07 4.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/97038192-78a3-48f9-9aa6-23543348d45e/@@download/cross_correlation_plot/ENCFF050IAVENCFF570XLQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB839WDB michael-snyder:HEK_eGFP-ZNF800_FRT_ChIP_LC1 "ENCFF050IAV,ENCFF570XLQ" HiSeq 2000 2016-09-11T03:17:34.184608+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q2500369691p8yQ4j15j9 ENCSR316OQD https://www.encodeproject.org/experiments/ENCSR316OQD control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF335LND https://www.encodeproject.org/files/ENCFF335LND/@@download/ENCFF335LND.bam ENCFF461NWN https://www.encodeproject.org/files/ENCFF461NWN/@@download/ENCFF461NWN.bam 62.1 M 0 61.1 M 0.983 PE 101 101 native 27.0 M 0.0 M 25.8 M 0.831 0.97 0.97 38.75 215 1.06 4.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/54582ecc-94c1-4afb-916a-3ef07d72117c/@@download/cross_correlation_plot/ENCFF660NKLENCFF485UTC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB587FUA michael-snyder:HEK_eGFP-ZNF655_FRT_ChIP_LC1 "ENCFF485UTC,ENCFF660NKL" HiSeq 2000 2016-09-11T03:17:21.367298+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q3280369313z5p18P2G95 ENCSR342AGU https://www.encodeproject.org/experiments/ENCSR342AGU control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF712WCF https://www.encodeproject.org/files/ENCFF712WCF/@@download/ENCFF712WCF.bam ENCFF719PXX https://www.encodeproject.org/files/ENCFF719PXX/@@download/ENCFF719PXX.bam 121.6 M 0 117.4 M 0.965 PE 101 101 native 50.3 M 0.0 M 48.7 M 0.800 0.97 0.97 34.20 215 1.04 3.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/2aa7f969-74e3-426b-83e0-55dd0b02dfb3/@@download/cross_correlation_plot/ENCFF154SYWENCFF172JDP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB760OCM michael-snyder:HEK_eGFP-ZSCAN5A_FRT_ChIP_LC "ENCFF154SYW,ENCFF172JDP" HiSeq 4000 2016-08-13T23:50:56.344755+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5X680369BXgbKbj97Jv6Y ENCSR354FNX https://www.encodeproject.org/experiments/ENCSR354FNX control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF470DTH https://www.encodeproject.org/files/ENCFF470DTH/@@download/ENCFF470DTH.bam ENCFF771QFT https://www.encodeproject.org/files/ENCFF771QFT/@@download/ENCFF771QFT.bam 98.5 M 0 94.5 M 0.959 PE 101 101 native 41.0 M 0.0 M 38.8 M 0.788 0.95 0.95 21.14 215 1.04 4.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3158aaa-606f-47ca-8fbe-36736b637816/@@download/cross_correlation_plot/ENCFF085HHBENCFF467VIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB529UQM michael-snyder:HEK_eGFP-ZNF18_FRT_ChIP_LC "ENCFF467VIQ,ENCFF085HHB" HiSeq 4000 2016-08-13T23:42:55.035194+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5XJ80369JjVqXgZ9JpB6P ENCSR361UQO https://www.encodeproject.org/experiments/ENCSR361UQO control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF329ZGY https://www.encodeproject.org/files/ENCFF329ZGY/@@download/ENCFF329ZGY.bam ENCFF243IQR https://www.encodeproject.org/files/ENCFF243IQR/@@download/ENCFF243IQR.bam 63.7 M 0 62.1 M 0.975 PE 101 101 native 26.9 M 0.0 M 26.5 M 0.833 0.99 0.99 70.54 210 1.06 3.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/66b05868-c606-409c-a135-710031d21f33/@@download/cross_correlation_plot/ENCFF069TUAENCFF886JJC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB883NEN michael-snyder:HEK_eGFP-ZNF707_FRT_ChIP_LC1 "ENCFF886JJC,ENCFF069TUA" HiSeq 2000 2016-09-11T03:16:54.782031+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q3V003696gGz8k04XPBY9 ENCSR398UVH https://www.encodeproject.org/experiments/ENCSR398UVH control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF722UID https://www.encodeproject.org/files/ENCFF722UID/@@download/ENCFF722UID.bam ENCFF633HYG https://www.encodeproject.org/files/ENCFF633HYG/@@download/ENCFF633HYG.bam 78.7 M 0 76.8 M 0.976 PE 101 101 native 33.2 M 0.0 M 32.6 M 0.829 0.99 0.99 68.37 200 1.06 3.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/51aedb8b-f9ec-4d5c-8730-26c5da50b4e5/@@download/cross_correlation_plot/ENCFF370DYUENCFF793FGU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB760OCM michael-snyder:HEK_eGFP-ZSCAN5A_FRT_ChIP_LC "ENCFF793FGU,ENCFF370DYU" HiSeq 2000 2016-08-13T23:49:59.813998+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5Vx80369P08VgfZ96gVp6 ENCSR429LAP https://www.encodeproject.org/experiments/ENCSR429LAP control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF945YPE https://www.encodeproject.org/files/ENCFF945YPE/@@download/ENCFF945YPE.bam ENCFF084JUL https://www.encodeproject.org/files/ENCFF084JUL/@@download/ENCFF084JUL.bam 97.6 M 0 94.7 M 0.970 PE 101 101 native 40.9 M 0.0 M 38.7 M 0.792 0.96 0.96 25.95 210 1.05 4.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/785592f6-c5a2-433a-aeb2-9223496e9a50/@@download/cross_correlation_plot/ENCFF736BPAENCFF595HTZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB100XVY michael-snyder:HEK_eGFP-SP7_FRT_ChIP_LC "ENCFF595HTZ,ENCFF736BPA" HiSeq 4000 2016-08-13T23:48:32.973038+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5X400369P08VgfZ96gVpp ENCSR468NLK https://www.encodeproject.org/experiments/ENCSR468NLK control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF624LCZ https://www.encodeproject.org/files/ENCFF624LCZ/@@download/ENCFF624LCZ.bam ENCFF862XLE https://www.encodeproject.org/files/ENCFF862XLE/@@download/ENCFF862XLE.bam 52.0 M 0 50.8 M 0.976 PE 101 101 native 22.1 M 0.0 M 21.7 M 0.834 0.98 0.98 66.48 200 1.07 4.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e61fac0-d8e6-42e8-ad5c-31a677971f30/@@download/cross_correlation_plot/ENCFF534SCDENCFF184SBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB794UMJ michael-snyder:HEK_eGFP-ZNF165_FRT_ChIP_LC1 "ENCFF184SBV,ENCFF534SCD" HiSeq 2000 2016-09-11T03:16:57.254618+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q2JQ03690qG5Zzk8499f3 ENCSR499OOH https://www.encodeproject.org/experiments/ENCSR499OOH control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF699FIT https://www.encodeproject.org/files/ENCFF699FIT/@@download/ENCFF699FIT.bam ENCFF086LLR https://www.encodeproject.org/files/ENCFF086LLR/@@download/ENCFF086LLR.bam 68.5 M 0 67.1 M 0.980 PE 101 101 native 29.3 M 0.0 M 28.2 M 0.823 0.97 0.97 30.99 205 1.06 4.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/70441fcf-6106-455e-bd59-46b42cb24837/@@download/cross_correlation_plot/ENCFF342YBRENCFF247VVB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB529UQM michael-snyder:HEK_eGFP-ZNF18_FRT_ChIP_LC "ENCFF247VVB,ENCFF342YBR" HiSeq 2000 2016-08-13T23:42:56.867648+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5XP803693GY6YjZ976YF8 ENCSR499QIO https://www.encodeproject.org/experiments/ENCSR499QIO control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF004ZOO https://www.encodeproject.org/files/ENCFF004ZOO/@@download/ENCFF004ZOO.bam ENCFF120BDS https://www.encodeproject.org/files/ENCFF120BDS/@@download/ENCFF120BDS.bam 66.4 M 0 65.0 M 0.978 PE 101 101 native 28.4 M 0.0 M 27.6 M 0.831 0.98 0.98 53.80 215 1.07 4.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/fef97eb9-c913-4a6d-94c0-74c4f70fca44/@@download/cross_correlation_plot/ENCFF547QSEENCFF804THN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB315SEM michael-snyder:HEK_eGFP-ZSCAN4_FRT_ChIP_LC1 "ENCFF547QSE,ENCFF804THN" HiSeq 2000 2016-09-11T03:17:51.875391+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q3G00369B1pgXbv4QF0Gx ENCSR523KUQ https://www.encodeproject.org/experiments/ENCSR523KUQ control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF937VTB https://www.encodeproject.org/files/ENCFF937VTB/@@download/ENCFF937VTB.bam ENCFF977WFN https://www.encodeproject.org/files/ENCFF977WFN/@@download/ENCFF977WFN.bam 75.0 M 0 73.4 M 0.979 PE 101 101 native 32.2 M 0.0 M 31.4 M 0.838 0.98 0.98 48.04 200 1.06 3.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/174a035d-da0a-482b-a5a6-128a15899c00/@@download/cross_correlation_plot/ENCFF878ZVKENCFF256KTI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB084DHR michael-snyder:HEK_eGFP-ATF2_FRT_ChIP_LC1 "ENCFF878ZVK,ENCFF256KTI" HiSeq 2000 2016-09-11T03:18:27.829070+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q2k803694XqQYgk81BPb6 ENCSR537CWQ https://www.encodeproject.org/experiments/ENCSR537CWQ control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF031FZB https://www.encodeproject.org/files/ENCFF031FZB/@@download/ENCFF031FZB.bam ENCFF350KQI https://www.encodeproject.org/files/ENCFF350KQI/@@download/ENCFF350KQI.bam 65.7 M 0 64.5 M 0.982 PE 101 101 native 28.2 M 0.0 M 27.1 M 0.825 0.98 0.98 42.01 210 1.06 4.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/ebab0807-2ae4-41bf-a7c2-2c5a3d36bbbb/@@download/cross_correlation_plot/ENCFF153HYBENCFF374JTH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB100XVY michael-snyder:HEK_eGFP-SP7_FRT_ChIP_LC "ENCFF153HYB,ENCFF374JTH" HiSeq 2000 2016-08-13T23:46:46.324347+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5XBj0369BXgbKbj97Jv6v ENCSR603CJM https://www.encodeproject.org/experiments/ENCSR603CJM control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF743WAA https://www.encodeproject.org/files/ENCFF743WAA/@@download/ENCFF743WAA.bam ENCFF841LDY https://www.encodeproject.org/files/ENCFF841LDY/@@download/ENCFF841LDY.bam 63.4 M 0 61.6 M 0.972 PE 101 101 native 26.7 M 0.0 M 26.3 M 0.829 0.99 0.99 78.69 195 1.06 3.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/075daa9f-631a-48c5-9e1b-4081c4b0b834/@@download/cross_correlation_plot/ENCFF427XVXENCFF327UHP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB494OAW michael-snyder:HEK_eGFP-ZNF423_FRT_ChIP_LC2 "ENCFF327UHP,ENCFF427XVX" HiSeq 2000 2016-09-11T03:17:35.707827+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q3bQ0369PBkYfgj4Z2f8Q ENCSR679WSJ https://www.encodeproject.org/experiments/ENCSR679WSJ control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF323SCL https://www.encodeproject.org/files/ENCFF323SCL/@@download/ENCFF323SCL.bam ENCFF705FKI https://www.encodeproject.org/files/ENCFF705FKI/@@download/ENCFF705FKI.bam 63.9 M 0 62.2 M 0.973 PE 101 101 native 26.8 M 0.0 M 26.4 M 0.826 0.99 0.99 74.16 205 1.06 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/0211bcdd-86b5-4ffc-acc2-603c7720e014/@@download/cross_correlation_plot/ENCFF458QHCENCFF696JSC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB725JKA michael-snyder:HEK_eGFP-ZNF32_FRT_ChIP_LC1 "ENCFF458QHC,ENCFF696JSC" HiSeq 2000 2016-09-11T03:18:12.204654+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q2z80369Kkk1Yvk89JFqy ENCSR688NWK https://www.encodeproject.org/experiments/ENCSR688NWK control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF145UQB https://www.encodeproject.org/files/ENCFF145UQB/@@download/ENCFF145UQB.bam ENCFF424ATY https://www.encodeproject.org/files/ENCFF424ATY/@@download/ENCFF424ATY.bam 92.2 M 0 88.7 M 0.963 PE 101 101 native 38.1 M 0.0 M 36.4 M 0.791 0.96 0.96 27.63 215 1.05 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6817021-75cd-4c9d-a75e-1359d214cbd6/@@download/cross_correlation_plot/ENCFF952FAGENCFF956RLS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB453PDK michael-snyder:HEK_eGFP-ZFP62_FRT_ChIP_LC "ENCFF956RLS,ENCFF952FAG" HiSeq 4000 2016-08-13T23:48:18.409512+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg5X8j03693GY6YjZ976YBy ENCSR736BTL https://www.encodeproject.org/experiments/ENCSR736BTL control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF910MJF https://www.encodeproject.org/files/ENCFF910MJF/@@download/ENCFF910MJF.bam ENCFF989PGT https://www.encodeproject.org/files/ENCFF989PGT/@@download/ENCFF989PGT.bam 59.1 M 0 57.6 M 0.975 PE 101 101 native 25.1 M 0.0 M 24.8 M 0.839 0.99 0.99 87.15 205 1.07 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/bff9f83a-5a41-4ad2-acfe-b31644567780/@@download/cross_correlation_plot/ENCFF259QKUENCFF437BSD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB817WJN michael-snyder:HEK_eGFP-SP2_FRT_ChIP_LC1 "ENCFF259QKU,ENCFF437BSD" HiSeq 2000 2016-09-11T03:19:44.745878+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q38Q0369F1Xf4jx84Ybky ENCSR782QKO https://www.encodeproject.org/experiments/ENCSR782QKO control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF035DJR https://www.encodeproject.org/files/ENCFF035DJR/@@download/ENCFF035DJR.bam ENCFF747VRU https://www.encodeproject.org/files/ENCFF747VRU/@@download/ENCFF747VRU.bam 66.0 M 0 64.9 M 0.983 PE 101 101 native 28.6 M 0.0 M 26.9 M 0.815 0.96 0.96 26.64 215 1.07 4.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/ccb06b71-9cd0-4407-8725-c93a491c4eb2/@@download/cross_correlation_plot/ENCFF696OLXENCFF825GYY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB182EFD michael-snyder:HEK_eGFP-MAZ_FRT_ChIP_LC3 "ENCFF696OLX,ENCFF825GYY" HiSeq 2000 2016-09-11T03:18:39.956363+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q1vQ0369BZpfvvj4jQxJK ENCSR840JVQ https://www.encodeproject.org/experiments/ENCSR840JVQ control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF558XTN https://www.encodeproject.org/files/ENCFF558XTN/@@download/ENCFF558XTN.bam ENCFF477HPX https://www.encodeproject.org/files/ENCFF477HPX/@@download/ENCFF477HPX.bam 67.2 M 0 65.2 M 0.971 PE 101 101 native 28.0 M 0.0 M 27.6 M 0.822 0.99 0.99 81.17 205 1.06 4.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/017061ed-5f8f-4de0-a4c6-24da1c8d0dca/@@download/cross_correlation_plot/ENCFF668LQFENCFF169WOT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB543WFM michael-snyder:HEK_eGFP-ZFP41_FRT_ChIP_LC1 "ENCFF169WOT,ENCFF668LQF" HiSeq 2000 2016-09-11T03:18:53.045574+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q1jj0369GYv1KkxpKX4PP ENCSR851FFP https://www.encodeproject.org/experiments/ENCSR851FFP control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF437APX https://www.encodeproject.org/files/ENCFF437APX/@@download/ENCFF437APX.bam ENCFF856SYG https://www.encodeproject.org/files/ENCFF856SYG/@@download/ENCFF856SYG.bam 63.6 M 0 62.1 M 0.978 PE 101 101 native 27.3 M 0.0 M 26.7 M 0.841 0.98 0.98 61.64 205 1.06 3.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5da8b5e-64a4-4f3a-afd8-5780d68dd414/@@download/cross_correlation_plot/ENCFF769KWFENCFF967IDB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB794OJY michael-snyder:HEK_eGFP-AEBP2_FRT_ChIP_LC1 "ENCFF967IDB,ENCFF769KWF" HiSeq 2000 2016-09-11T03:17:07.627262+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q2vQ03690qG5Zzk8499fX ENCSR860UAT https://www.encodeproject.org/experiments/ENCSR860UAT control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF129QRT https://www.encodeproject.org/files/ENCFF129QRT/@@download/ENCFF129QRT.bam ENCFF245VNC https://www.encodeproject.org/files/ENCFF245VNC/@@download/ENCFF245VNC.bam 72.9 M 0 71.0 M 0.975 PE 101 101 native 30.8 M 0.0 M 30.3 M 0.830 0.98 0.98 63.02 205 1.06 3.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/bfdd0ef4-5e3a-4063-8fa4-bd91e4aeeafd/@@download/cross_correlation_plot/ENCFF642NHFENCFF446ZHN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB599HDQ michael-snyder:HEK_eGFP-PRDM12_FRT_ChIP_LC1 "ENCFF446ZHN,ENCFF642NHF" HiSeq 2000 2016-09-11T03:19:21.950200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q1bQ03693JZG3y9p8v5Yb ENCSR873PPH https://www.encodeproject.org/experiments/ENCSR873PPH control Control-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF375TFT https://www.encodeproject.org/files/ENCFF375TFT/@@download/ENCFF375TFT.bam ENCFF045PXK https://www.encodeproject.org/files/ENCFF045PXK/@@download/ENCFF045PXK.bam 68.3 M 0 66.3 M 0.971 PE 101 101 native 28.4 M 0.0 M 27.9 M 0.816 0.98 0.98 63.65 205 1.06 4.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/07ffa54d-631f-4181-950b-e7258974ba8e/@@download/cross_correlation_plot/ENCFF354EZUENCFF806BJB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB504PSD michael-snyder:HEK_eGFP-ZFP64_FRT_ChIP_LC1 "ENCFF806BJB,ENCFF354EZU" HiSeq 2000 2016-09-11T03:17:56.127559+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz9Q2b803695XjQpy58BQX60 ENCSR769JRS https://www.encodeproject.org/experiments/ENCSR769JRS "recombinant protein,transcription factor" eGFP-AEBP2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF131NUZ https://www.encodeproject.org/files/ENCFF131NUZ/@@download/ENCFF131NUZ.bam ENCFF607JFD https://www.encodeproject.org/files/ENCFF607JFD/@@download/ENCFF607JFD.bam 86.6 M 0 83.4 M 0.963 PE 101 101 native 36.7 M 0.0 M 36.5 M 0.843 0.99 0.99 144.68 175 1.06 2.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9acc55f-3b5c-46cb-b3b0-7196f682d280/@@download/cross_correlation_plot/ENCFF151IBJENCFF113SKG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB885RXU michael-snyder:HEK_eGFP-AEBP2_FRT_ChIP_L1 "ENCFF113SKG,ENCFF151IBJ" HiSeq 2000 2016-09-14T19:23:30.868210+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9J1j036994Jx4PVBXKB1V ENCSR769JRS https://www.encodeproject.org/experiments/ENCSR769JRS "recombinant protein,transcription factor" eGFP-AEBP2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF250NHK https://www.encodeproject.org/files/ENCFF250NHK/@@download/ENCFF250NHK.bam ENCFF911TNQ https://www.encodeproject.org/files/ENCFF911TNQ/@@download/ENCFF911TNQ.bam 64.9 M 0 63.1 M 0.972 PE 101 101 native 27.8 M 0.0 M 27.7 M 0.854 1.00 1.00 260.90 190 1.06 3.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb4c6a23-65dd-48e3-abb6-98a37b527c7a/@@download/cross_correlation_plot/ENCFF588QLYENCFF305TCY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB930DBM michael-snyder:HEK_eGFP-AEBP2_FRT_ChIP_L2 "ENCFF588QLY,ENCFF305TCY" HiSeq 2000 2016-09-14T19:18:31.380070+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9J6003698GBQPfZ4kj0V0 ENCSR217HTK https://www.encodeproject.org/experiments/ENCSR217HTK "recombinant protein,transcription factor" eGFP-ATF2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF739NWN https://www.encodeproject.org/files/ENCFF739NWN/@@download/ENCFF739NWN.bam ENCFF385ZTG https://www.encodeproject.org/files/ENCFF385ZTG/@@download/ENCFF385ZTG.bam 38.2 M 0 37.5 M 0.982 PE 101 101 native 16.7 M 0.0 M 16.6 M 0.872 1.00 1.00 218.90 215 1.22 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/f79a25b5-e7ed-44ae-be5d-e8434367c51d/@@download/cross_correlation_plot/ENCFF841UXTENCFF354SEG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB876EXL michael-snyder:HEK_eGFP-ATF2_FRT_ChIP_L1 "ENCFF841UXT,ENCFF354SEG" HiSeq 2000 2016-09-14T19:17:58.737481+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG92Zj0369PzXj14kJK85p6 ENCSR217HTK https://www.encodeproject.org/experiments/ENCSR217HTK "recombinant protein,transcription factor" eGFP-ATF2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF705QJT https://www.encodeproject.org/files/ENCFF705QJT/@@download/ENCFF705QJT.bam ENCFF474GKS https://www.encodeproject.org/files/ENCFF474GKS/@@download/ENCFF474GKS.bam 35.4 M 0 34.8 M 0.982 PE 101 101 native 15.5 M 0.0 M 15.4 M 0.871 1.00 1.00 232.58 200 1.22 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/d8c10e46-3154-40f9-8351-cf1d215f0ac2/@@download/cross_correlation_plot/ENCFF693QBSENCFF226SDV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB364PGJ michael-snyder:HEK_eGFP-ATF2_FRT_ChIP_L2 "ENCFF693QBS,ENCFF226SDV" HiSeq 2000 2016-09-14T19:17:43.898278+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG92jj0369BvpJbQkBjP9bk ENCSR021DJC https://www.encodeproject.org/experiments/ENCSR021DJC "transcription factor,recombinant protein" eGFP-BCL11A-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF111JJX https://www.encodeproject.org/files/ENCFF111JJX/@@download/ENCFF111JJX.bam ENCFF146PZG https://www.encodeproject.org/files/ENCFF146PZG/@@download/ENCFF146PZG.bam 53.4 M 0 51.9 M 0.972 PE 101 101 native 22.9 M 0.0 M 22.7 M 0.849 0.99 0.99 125.18 200 1.08 2.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c25d758-aa06-41e4-aa46-6d8f826b236b/@@download/cross_correlation_plot/ENCFF332WPEENCFF818OPZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB817TDH michael-snyder:HEK_eGFP-BCL11A_FRT_ChIP_L1 "ENCFF332WPE,ENCFF818OPZ" HiSeq 2000 2016-09-14T19:18:29.527434+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9zJj03693JZG3y9p8x003 ENCSR021DJC https://www.encodeproject.org/experiments/ENCSR021DJC "transcription factor,recombinant protein" eGFP-BCL11A-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF239VPD https://www.encodeproject.org/files/ENCFF239VPD/@@download/ENCFF239VPD.bam ENCFF650UUD https://www.encodeproject.org/files/ENCFF650UUD/@@download/ENCFF650UUD.bam 37.8 M 0 37.0 M 0.979 PE 101 101 native 16.4 M 0.0 M 16.2 M 0.857 0.99 0.99 111.18 210 1.10 4.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/f46eec67-161e-4fdf-8088-60403129d126/@@download/cross_correlation_plot/ENCFF961HCTENCFF571HFF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB212HQB michael-snyder:HEK_eGFP-BCL11A_FRT_ChIP_L2 "ENCFF961HCT,ENCFF571HFF" HiSeq 2000 2016-09-14T19:10:26.275279+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9zX803690q324KVG1qQ7G ENCSR770PQN https://www.encodeproject.org/experiments/ENCSR770PQN "transcription factor,recombinant protein" eGFP-BCL11B-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF424CSY https://www.encodeproject.org/files/ENCFF424CSY/@@download/ENCFF424CSY.bam ENCFF953PHK https://www.encodeproject.org/files/ENCFF953PHK/@@download/ENCFF953PHK.bam 68.3 M 0 66.5 M 0.974 PE 101 101 native 29.1 M 0.0 M 28.9 M 0.848 0.99 0.99 161.38 210 1.06 2.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/69cde63c-68cf-444c-bb8a-73e784690f2e/@@download/cross_correlation_plot/ENCFF899JOKENCFF878ZEU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB175NHV michael-snyder:HEK_eGFP-BCL11B_FRT_ChIP_L1 "ENCFF878ZEU,ENCFF899JOK" HiSeq 2000 2016-09-14T19:30:05.843921+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9P9803692xk39gZV1444Q ENCSR770PQN https://www.encodeproject.org/experiments/ENCSR770PQN "transcription factor,recombinant protein" eGFP-BCL11B-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF700AOV https://www.encodeproject.org/files/ENCFF700AOV/@@download/ENCFF700AOV.bam ENCFF014OEH https://www.encodeproject.org/files/ENCFF014OEH/@@download/ENCFF014OEH.bam 41.0 M 0 40.2 M 0.979 PE 101 101 native 17.8 M 0.0 M 17.6 M 0.858 0.99 0.99 85.05 210 1.09 4.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/425d7ac0-e411-424c-b9f8-d46993a65957/@@download/cross_correlation_plot/ENCFF220MRDENCFF498UTM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB369RII michael-snyder:HEK_eGFP-BCL11B_FRT_ChIP_L2 "ENCFF220MRD,ENCFF498UTM" HiSeq 2000 2016-09-14T19:25:35.837661+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9PGj0369GX4Qp1Gv13gJ7 ENCSR673SGK https://www.encodeproject.org/experiments/ENCSR673SGK "recombinant protein,transcription factor" eGFP-BCL6B-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF904MWX https://www.encodeproject.org/files/ENCFF904MWX/@@download/ENCFF904MWX.bam ENCFF050KIG https://www.encodeproject.org/files/ENCFF050KIG/@@download/ENCFF050KIG.bam 77.3 M 0 75.0 M 0.970 PE 101 101 native 32.2 M 0.0 M 30.6 M 0.792 0.95 0.95 20.18 200 1.06 3.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/225ba847-5aed-4f31-923f-3e57ac1584a2/@@download/cross_correlation_plot/ENCFF793GUDENCFF577UHT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB651YKZ michael-snyder:HEK_eGFP-BCL6B_FRT_ChIP_L1 "ENCFF577UHT,ENCFF793GUD" HiSeq 4000 2017-05-05T10:45:20.328044+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yqy80369JxZVj70Jj06BQ ENCSR673SGK https://www.encodeproject.org/experiments/ENCSR673SGK "recombinant protein,transcription factor" eGFP-BCL6B-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF313PRG https://www.encodeproject.org/files/ENCFF313PRG/@@download/ENCFF313PRG.bam ENCFF025BHY https://www.encodeproject.org/files/ENCFF025BHY/@@download/ENCFF025BHY.bam 94.1 M 0 91.4 M 0.972 PE 101 101 native 39.1 M 0.0 M 36.3 M 0.772 0.93 0.93 13.78 205 1.06 3.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4bfb995-ca5a-48c0-8e54-f0df6c5f6ee3/@@download/cross_correlation_plot/ENCFF683HBTENCFF213ENW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB027ABB michael-snyder:HEK_eGFP-BCL6B_FRT_ChIP_L2 "ENCFF683HBT,ENCFF213ENW" HiSeq 4000 2017-05-05T11:39:45.031031+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yv1j03699Yp667114bv46 ENCSR617IFZ https://www.encodeproject.org/experiments/ENCSR617IFZ "recombinant protein,transcription factor" eGFP-CTCF-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF354GWS https://www.encodeproject.org/files/ENCFF354GWS/@@download/ENCFF354GWS.bam ENCFF978EPB https://www.encodeproject.org/files/ENCFF978EPB/@@download/ENCFF978EPB.bam 82.3 M 0 80.1 M 0.973 PE 101 101 native 34.7 M 0.0 M 34.6 M 0.840 1.00 1.00 228.83 215 1.07 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ad9eb00-9497-4056-9f06-8036f91a0ec6/@@download/cross_correlation_plot/ENCFF631JSVENCFF715KYL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB048DBS michael-snyder:HEK_eGFP-CTCF_FRT_ChIP_L1 "ENCFF715KYL,ENCFF631JSV" HiSeq 2000 2016-09-14T19:27:27.085767+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8bj003693JZG3y9p8vzXG ENCSR617IFZ https://www.encodeproject.org/experiments/ENCSR617IFZ "recombinant protein,transcription factor" eGFP-CTCF-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF864ELR https://www.encodeproject.org/files/ENCFF864ELR/@@download/ENCFF864ELR.bam ENCFF198YKO https://www.encodeproject.org/files/ENCFF198YKO/@@download/ENCFF198YKO.bam 78.4 M 0 76.7 M 0.979 PE 101 101 native 33.7 M 0.0 M 33.5 M 0.855 1.00 1.00 207.37 205 1.10 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ffb2fa0-ce49-4047-9e43-6398243c9b54/@@download/cross_correlation_plot/ENCFF002OWAENCFF833BQT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB541OLX michael-snyder:HEK_eGFP-CTCF_FRT_ChIP_L2 "ENCFF002OWA,ENCFF833BQT" HiSeq 2000 2016-09-14T19:25:36.208923+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8bv80369GYv1KkxpKXv5k ENCSR919CZU https://www.encodeproject.org/experiments/ENCSR919CZU "transcription factor,recombinant protein" eGFP-EGR2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF888DOH https://www.encodeproject.org/files/ENCFF888DOH/@@download/ENCFF888DOH.bam ENCFF014JSO https://www.encodeproject.org/files/ENCFF014JSO/@@download/ENCFF014JSO.bam 28.9 M 0 28.0 M 0.969 PE 101 101 native 12.4 M 0.0 M 12.3 M 0.851 0.99 0.99 126.30 195 1.79 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3f7c991-7120-4730-84bf-3e5f9e183e05/@@download/cross_correlation_plot/ENCFF208PYPENCFF947KVR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB453XUU michael-snyder:HEK_eGFP-EGR2_FRT_ChIP_L1 "ENCFF208PYP,ENCFF947KVR" HiSeq 2000 2016-09-14T19:24:09.717677+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9X680369B1pgXbv4QFgVY ENCSR919CZU https://www.encodeproject.org/experiments/ENCSR919CZU "transcription factor,recombinant protein" eGFP-EGR2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF234ALA https://www.encodeproject.org/files/ENCFF234ALA/@@download/ENCFF234ALA.bam ENCFF808VPA https://www.encodeproject.org/files/ENCFF808VPA/@@download/ENCFF808VPA.bam 23.8 M 0 23.3 M 0.978 PE 101 101 native 10.4 M 0.0 M 10.3 M 0.867 1.00 1.00 243.18 215 1.48 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/3339d7ec-c96b-4099-a0d1-3de1d3a02f1b/@@download/cross_correlation_plot/ENCFF855HOAENCFF079AVI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB527NCI michael-snyder:HEK_eGFP-EGR2_FRT_ChIP_L2 "ENCFF079AVI,ENCFF855HOA" HiSeq 2000 2016-09-14T19:24:18.329009+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9XB8036973J1BzVpJ4jGz ENCSR827NWO https://www.encodeproject.org/experiments/ENCSR827NWO "recombinant protein,transcription factor" eGFP-FEZF1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF356TOS https://www.encodeproject.org/files/ENCFF356TOS/@@download/ENCFF356TOS.bam ENCFF863MDM https://www.encodeproject.org/files/ENCFF863MDM/@@download/ENCFF863MDM.bam 63.8 M 0 61.6 M 0.965 PE 101 101 native 26.6 M 0.0 M 26.4 M 0.827 0.99 0.99 129.86 205 1.33 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/c23c344d-a9be-4090-a396-321d972a213a/@@download/cross_correlation_plot/ENCFF548NUZENCFF800BVA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB400STV michael-snyder:HEK_eGFP-FEZF1_FRT_ChIP_L1 "ENCFF548NUZ,ENCFF800BVA" HiSeq 2000 2016-09-14T19:21:18.304353+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG99x803695gqq4YJBj8k7z ENCSR827NWO https://www.encodeproject.org/experiments/ENCSR827NWO "recombinant protein,transcription factor" eGFP-FEZF1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF379UQD https://www.encodeproject.org/files/ENCFF379UQD/@@download/ENCFF379UQD.bam ENCFF903IHH https://www.encodeproject.org/files/ENCFF903IHH/@@download/ENCFF903IHH.bam 55.8 M 0 54.7 M 0.980 PE 101 101 native 24.3 M 0.0 M 24.0 M 0.861 0.99 0.99 116.80 220 1.19 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1325cbd-67d5-4fd4-bdbd-6062d9a8b766/@@download/cross_correlation_plot/ENCFF485SUNENCFF292BLL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB732RHF michael-snyder:HEK_eGFP-FEZF1_FRT_ChIP_L2 "ENCFF292BLL,ENCFF485SUN" HiSeq 2000 2016-09-14T19:22:33.502533+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9B1j03691jV3BQb6PVp52 ENCSR445PDR https://www.encodeproject.org/experiments/ENCSR445PDR "recombinant protein,transcription factor" eGFP-GFI1B-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF112YSB https://www.encodeproject.org/files/ENCFF112YSB/@@download/ENCFF112YSB.bam ENCFF394GPQ https://www.encodeproject.org/files/ENCFF394GPQ/@@download/ENCFF394GPQ.bam 65.5 M 0 64.0 M 0.977 PE 101 101 native 28.1 M 0.0 M 27.9 M 0.852 0.99 0.99 113.56 190 1.07 3.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/b00b1826-bd1a-4d22-8702-2e875df330b5/@@download/cross_correlation_plot/ENCFF429EZNENCFF767SIE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB967ZOP michael-snyder:HEK_eGFP-GFI1B_FRT_ChIP_L1 "ENCFF429EZN,ENCFF767SIE" HiSeq 2000 2016-09-14T19:21:52.518671+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG98Zj03692xk39gZV1441Z ENCSR445PDR https://www.encodeproject.org/experiments/ENCSR445PDR "recombinant protein,transcription factor" eGFP-GFI1B-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF861MLP https://www.encodeproject.org/files/ENCFF861MLP/@@download/ENCFF861MLP.bam ENCFF564JVM https://www.encodeproject.org/files/ENCFF564JVM/@@download/ENCFF564JVM.bam 63.8 M 0 62.5 M 0.979 PE 101 101 native 27.6 M 0.0 M 27.5 M 0.862 0.99 0.99 197.79 190 1.07 2.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/50c88124-fb4b-48eb-ba6d-488d147390f8/@@download/cross_correlation_plot/ENCFF752NOEENCFF856HJS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB702VIC michael-snyder:HEK_eGFP-GFI1B_FRT_ChIP_L2 "ENCFF856HJS,ENCFF752NOE" HiSeq 2000 2016-09-14T19:20:44.337190+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG98jj03698Xg7B7xb4pbzZ ENCSR978EQY https://www.encodeproject.org/experiments/ENCSR978EQY "transcription factor,recombinant protein" eGFP-GLI2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF538HJQ https://www.encodeproject.org/files/ENCFF538HJQ/@@download/ENCFF538HJQ.bam ENCFF017NOP https://www.encodeproject.org/files/ENCFF017NOP/@@download/ENCFF017NOP.bam 45.2 M 0 42.6 M 0.942 PE 101 101 native 18.6 M 0.0 M 18.0 M 0.795 0.97 0.97 29.81 200 1.10 3.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/0da19b35-a929-48cc-95a8-a36c6f5cad51/@@download/cross_correlation_plot/ENCFF594EJQENCFF541JAR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB932FGA michael-snyder:HEK_eGFP-GLI2_FRT_ChIP_L1 "ENCFF594EJQ,ENCFF541JAR" HiSeq 2000 2017-03-04T18:17:50.712146+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv8F80369BJ6Pk3jp4J5BV ENCSR978EQY https://www.encodeproject.org/experiments/ENCSR978EQY "transcription factor,recombinant protein" eGFP-GLI2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF695FUY https://www.encodeproject.org/files/ENCFF695FUY/@@download/ENCFF695FUY.bam ENCFF322BXF https://www.encodeproject.org/files/ENCFF322BXF/@@download/ENCFF322BXF.bam 84.8 M 0 83.0 M 0.979 PE 101 101 native 35.6 M 0.0 M 33.8 M 0.797 0.95 0.95 19.35 170 1.06 6.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/2979b023-32cf-4e2b-ab43-3578e84d0265/@@download/cross_correlation_plot/ENCFF677MGTENCFF020ZLF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB535VQW michael-snyder:HEK_eGFP-GLI2_FRT_ChIP_L2 "ENCFF020ZLF,ENCFF677MGT" HiSeq 2000 2017-03-04T18:24:05.459248+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv8fQ03691jGpk3j84pKf2 ENCSR211PZO https://www.encodeproject.org/experiments/ENCSR211PZO "recombinant protein,transcription factor" eGFP-GLI4-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF829UMN https://www.encodeproject.org/files/ENCFF829UMN/@@download/ENCFF829UMN.bam ENCFF398WCS https://www.encodeproject.org/files/ENCFF398WCS/@@download/ENCFF398WCS.bam 62.1 M 0 58.7 M 0.945 PE 101 101 native 25.6 M 0.0 M 25.5 M 0.822 1.00 1.00 383.24 210 1.06 2.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9572324-c3f9-4fd8-8aa8-60d7fcf779bf/@@download/cross_correlation_plot/ENCFF173JBWENCFF902JCN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB295BKB michael-snyder:HEK_eGFP-GLI4_FRT_ChIP_L1 "ENCFF173JBW,ENCFF902JCN" HiSeq 2000 2016-09-14T19:30:22.390234+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Vx00369PBkYfgj4Z3b14 ENCSR211PZO https://www.encodeproject.org/experiments/ENCSR211PZO "recombinant protein,transcription factor" eGFP-GLI4-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF737QWX https://www.encodeproject.org/files/ENCFF737QWX/@@download/ENCFF737QWX.bam ENCFF120AQL https://www.encodeproject.org/files/ENCFF120AQL/@@download/ENCFF120AQL.bam 67.6 M 0 64.2 M 0.949 PE 101 101 native 28.2 M 0.0 M 28.0 M 0.830 1.00 1.00 263.17 200 1.06 2.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c02fe48-efa1-4d89-856b-1431ecf27209/@@download/cross_correlation_plot/ENCFF662MFLENCFF611UQT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB307YFV michael-snyder:HEK_eGFP-GLI4_FRT_ChIP_L2 "ENCFF611UQT,ENCFF662MFL" HiSeq 2000 2016-09-14T19:27:39.495339+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9X1Q0369PBkYfgj4Z3b1G ENCSR482BBZ https://www.encodeproject.org/experiments/ENCSR482BBZ "transcription factor,recombinant protein" eGFP-GLIS1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF127DUL https://www.encodeproject.org/files/ENCFF127DUL/@@download/ENCFF127DUL.bam ENCFF884QPU https://www.encodeproject.org/files/ENCFF884QPU/@@download/ENCFF884QPU.bam 53.8 M 0 52.8 M 0.980 PE 101 101 native 23.4 M 0.0 M 23.2 M 0.863 0.99 0.99 126.24 200 1.66 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/105eb803-b279-4bc1-9393-66f05c310897/@@download/cross_correlation_plot/ENCFF548XKAENCFF420BRV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB498HLU michael-snyder:HEK_eGFP-GLIS1_FRT_ChIP_L1 "ENCFF548XKA,ENCFF420BRV" HiSeq 2000 2016-09-14T19:21:24.446910+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8z880369G2Yz4yQjpq81y ENCSR482BBZ https://www.encodeproject.org/experiments/ENCSR482BBZ "transcription factor,recombinant protein" eGFP-GLIS1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF759RDL https://www.encodeproject.org/files/ENCFF759RDL/@@download/ENCFF759RDL.bam ENCFF481TIW https://www.encodeproject.org/files/ENCFF481TIW/@@download/ENCFF481TIW.bam 49.6 M 0 48.4 M 0.975 PE 101 101 native 21.5 M 0.0 M 21.3 M 0.857 0.99 0.99 105.37 190 1.35 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/463af9f3-f993-4099-944e-adb49db09140/@@download/cross_correlation_plot/ENCFF307HHEENCFF946JCU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB334XGU michael-snyder:HEK_eGFP-GLIS1_FRT_ChIP_L2 "ENCFF946JCU,ENCFF307HHE" HiSeq 2000 2016-09-14T19:23:12.755280+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8zK0036973J1BzVpJ4j77 ENCSR535DIA https://www.encodeproject.org/experiments/ENCSR535DIA "recombinant protein,transcription factor" eGFP-GLIS2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF120RXG https://www.encodeproject.org/files/ENCFF120RXG/@@download/ENCFF120RXG.bam ENCFF294FJN https://www.encodeproject.org/files/ENCFF294FJN/@@download/ENCFF294FJN.bam 69.8 M 0 67.6 M 0.968 PE 101 101 native 29.6 M 0.0 M 29.5 M 0.844 0.99 0.99 197.27 225 1.16 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/69bb5985-fb5f-4f39-9c06-9e65be2fcf1a/@@download/cross_correlation_plot/ENCFF641THNENCFF616ZBL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB092HSE michael-snyder:HEK_eGFP-GLIS2_FRT_ChIP_L1 "ENCFF616ZBL,ENCFF641THN" HiSeq 2000 2016-09-14T19:26:33.693568+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8yXj0369J6bkz8ZJ7qbxV ENCSR535DIA https://www.encodeproject.org/experiments/ENCSR535DIA "recombinant protein,transcription factor" eGFP-GLIS2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF128DGJ https://www.encodeproject.org/files/ENCFF128DGJ/@@download/ENCFF128DGJ.bam ENCFF121INF https://www.encodeproject.org/files/ENCFF121INF/@@download/ENCFF121INF.bam 56.3 M 0 54.8 M 0.973 PE 101 101 native 24.2 M 0.0 M 23.9 M 0.849 0.99 0.99 71.56 220 1.11 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/2512e005-91cd-4a36-9c47-109869fbe219/@@download/cross_correlation_plot/ENCFF100DYOENCFF862UVE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB905CRP michael-snyder:HEK_eGFP-GLIS2_FRT_ChIP_L2 "ENCFF862UVE,ENCFF100DYO" HiSeq 2000 2016-09-14T19:22:08.402728+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8ygj0369PzXj14kJK85j2 ENCSR803GYT https://www.encodeproject.org/experiments/ENCSR803GYT "recombinant protein,transcription factor" eGFP-HIC1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF533OJM https://www.encodeproject.org/files/ENCFF533OJM/@@download/ENCFF533OJM.bam ENCFF130QRS https://www.encodeproject.org/files/ENCFF130QRS/@@download/ENCFF130QRS.bam 107.7 M 0 102.8 M 0.954 PE 101 101 native 45.4 M 0.0 M 43.0 M 0.798 0.95 0.95 18.82 220 1.05 2.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/e42f107a-1b30-404f-8603-5bbefe298337/@@download/cross_correlation_plot/ENCFF169UALENCFF747KWI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB778MLD michael-snyder:HEK_eGFP-HIC1_FRT_ChIP_L1 "ENCFF169UAL,ENCFF747KWI" HiSeq 4000 2016-09-13T16:24:08.758628+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgYz803698GBQPfZ4kgp8j ENCSR803GYT https://www.encodeproject.org/experiments/ENCSR803GYT "recombinant protein,transcription factor" eGFP-HIC1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF794NBJ https://www.encodeproject.org/files/ENCFF794NBJ/@@download/ENCFF794NBJ.bam ENCFF224SAA https://www.encodeproject.org/files/ENCFF224SAA/@@download/ENCFF224SAA.bam 133.0 M 0 129.0 M 0.970 PE 101 101 native 56.6 M 0.0 M 53.1 M 0.799 0.94 0.94 16.02 215 1.05 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/c35903a5-b4f0-4d1e-82c2-1e187dee327d/@@download/cross_correlation_plot/ENCFF623BWWENCFF753QHT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB986OLV michael-snyder:HEK_eGFP-HIC1_FRT_ChIP_L2 "ENCFF753QHT,ENCFF623BWW" HiSeq 4000 2016-09-13T16:27:12.291394+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgZ2Q0369JpJK47VQfv1FK ENCSR382GSF https://www.encodeproject.org/experiments/ENCSR382GSF "recombinant protein,transcription factor" eGFP-INSM2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF823KOR https://www.encodeproject.org/files/ENCFF823KOR/@@download/ENCFF823KOR.bam ENCFF936DZL https://www.encodeproject.org/files/ENCFF936DZL/@@download/ENCFF936DZL.bam 60.2 M 0 57.6 M 0.957 PE 101 101 native 24.9 M 0.0 M 24.7 M 0.819 0.99 0.99 109.22 200 1.08 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b5886e5-2f5a-4bbe-9154-8b06bb329072/@@download/cross_correlation_plot/ENCFF724ABXENCFF150IYM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB036GOJ michael-snyder:HEK_eGFP-INSM2_FRT_ChIP_L1 "ENCFF150IYM,ENCFF724ABX" HiSeq 2000 2016-09-14T19:24:45.956251+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8b8Q0369JPg0Xjj75v3qB ENCSR382GSF https://www.encodeproject.org/experiments/ENCSR382GSF "recombinant protein,transcription factor" eGFP-INSM2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF347HLU https://www.encodeproject.org/files/ENCFF347HLU/@@download/ENCFF347HLU.bam ENCFF749EZZ https://www.encodeproject.org/files/ENCFF749EZZ/@@download/ENCFF749EZZ.bam 80.5 M 0 77.4 M 0.962 PE 101 101 native 33.4 M 0.0 M 33.2 M 0.825 0.99 0.99 134.20 200 1.07 2.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/88522707-9196-4f44-8315-9533ce539d2a/@@download/cross_correlation_plot/ENCFF112XWZENCFF421MDM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB333RHS michael-snyder:HEK_eGFP-INSM2_FRT_ChIP_L2 "ENCFF112XWZ,ENCFF421MDM" HiSeq 2000 2016-09-14T19:26:04.363037+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8bJ0036973J1BzVpJ4j3k ENCSR859BMR https://www.encodeproject.org/experiments/ENCSR859BMR "recombinant protein,transcription factor" eGFP-KLF1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF233TEI https://www.encodeproject.org/files/ENCFF233TEI/@@download/ENCFF233TEI.bam ENCFF515VSS https://www.encodeproject.org/files/ENCFF515VSS/@@download/ENCFF515VSS.bam 62.3 M 0 61.0 M 0.980 PE 101 101 native 26.8 M 0.0 M 26.7 M 0.856 0.99 0.99 177.11 200 1.15 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/8392a9bc-5b60-4afa-9cb3-915bc519d7ea/@@download/cross_correlation_plot/ENCFF312XENENCFF246YGR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB326VNQ michael-snyder:HEK_eGFP-KLF1_FRT_ChIP_L1 "ENCFF312XEN,ENCFF246YGR" HiSeq 2000 2016-09-14T19:19:34.342608+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9980036997y2b0k8qBJV8 ENCSR859BMR https://www.encodeproject.org/experiments/ENCSR859BMR "recombinant protein,transcription factor" eGFP-KLF1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF059IPA https://www.encodeproject.org/files/ENCFF059IPA/@@download/ENCFF059IPA.bam ENCFF424TRF https://www.encodeproject.org/files/ENCFF424TRF/@@download/ENCFF424TRF.bam 71.2 M 0 67.8 M 0.953 PE 101 101 native 29.1 M 0.0 M 28.9 M 0.813 0.99 0.99 146.10 190 1.16 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b829723-a45e-4060-bad6-2378e4488f99/@@download/cross_correlation_plot/ENCFF426NQHENCFF957AJG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB212WDT michael-snyder:HEK_eGFP-KLF1_FRT_ChIP_L2 "ENCFF426NQH,ENCFF957AJG" HiSeq 2000 2016-09-14T19:21:02.659035+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG99J803695XjQpy58BVJ08 ENCSR397DQC https://www.encodeproject.org/experiments/ENCSR397DQC "recombinant protein,transcription factor" eGFP-KLF16-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF988IKU https://www.encodeproject.org/files/ENCFF988IKU/@@download/ENCFF988IKU.bam ENCFF880HPO https://www.encodeproject.org/files/ENCFF880HPO/@@download/ENCFF880HPO.bam 70.6 M 0 68.1 M 0.965 PE 101 101 native 29.2 M 0.0 M 29.0 M 0.822 0.99 0.99 184.36 205 1.07 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/6a05ca90-1d09-4897-940d-0588aa3349a2/@@download/cross_correlation_plot/ENCFF509PJPENCFF454MNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB699FEM michael-snyder:HEK_eGFP-KLF16_FRT_ChIP_L1 "ENCFF454MNE,ENCFF509PJP" HiSeq 2000 2016-09-14T19:29:30.170177+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9VB00369PzXj14kJK85z1 ENCSR397DQC https://www.encodeproject.org/experiments/ENCSR397DQC "recombinant protein,transcription factor" eGFP-KLF16-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF221FIU https://www.encodeproject.org/files/ENCFF221FIU/@@download/ENCFF221FIU.bam ENCFF943BGL https://www.encodeproject.org/files/ENCFF943BGL/@@download/ENCFF943BGL.bam 67.1 M 0 64.9 M 0.967 PE 101 101 native 27.9 M 0.0 M 27.7 M 0.825 0.99 0.99 156.66 200 1.07 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/85e227a6-8af2-46d7-a766-4f46dfaa8efe/@@download/cross_correlation_plot/ENCFF877OHUENCFF408NSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB649QYZ michael-snyder:HEK_eGFP-KLF16_FRT_ChIP_L2 "ENCFF877OHU,ENCFF408NSX" HiSeq 2000 2016-09-14T19:30:05.342347+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9VK00369J6bkz8ZJ7qf2J ENCSR065WUF https://www.encodeproject.org/experiments/ENCSR065WUF "transcription factor,recombinant protein" eGFP-KLF17-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF519SQU https://www.encodeproject.org/files/ENCFF519SQU/@@download/ENCFF519SQU.bam ENCFF715WZI https://www.encodeproject.org/files/ENCFF715WZI/@@download/ENCFF715WZI.bam 65.1 M 0 63.7 M 0.980 PE 101 101 native 28.1 M 0.0 M 28.0 M 0.860 1.00 1.00 257.55 200 1.09 2.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e3bf5c9-e6d7-416f-9dcb-fd00fdf5c112/@@download/cross_correlation_plot/ENCFF957TBUENCFF509LKR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB721PXQ michael-snyder:HEK_eGFP-KLF17_FRT_ChIP_L1 "ENCFF957TBU,ENCFF509LKR" HiSeq 2000 2016-09-14T19:21:53.624534+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG97gQ03698GBQPfZ4kj0PF ENCSR065WUF https://www.encodeproject.org/experiments/ENCSR065WUF "transcription factor,recombinant protein" eGFP-KLF17-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF913XHL https://www.encodeproject.org/files/ENCFF913XHL/@@download/ENCFF913XHL.bam ENCFF369RMP https://www.encodeproject.org/files/ENCFF369RMP/@@download/ENCFF369RMP.bam 69.2 M 0 67.6 M 0.977 PE 101 101 native 29.4 M 0.0 M 29.3 M 0.846 1.00 1.00 236.12 200 1.08 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/ccc0dbce-317b-4ef9-8537-ac13f01b13a2/@@download/cross_correlation_plot/ENCFF371HHVENCFF688KSF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB430LNO michael-snyder:HEK_eGFP-KLF17_FRT_ChIP_L2 "ENCFF371HHV,ENCFF688KSF" HiSeq 2000 2016-09-14T19:21:53.333743+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG97v003696gGz8k04XPz5Z ENCSR604VWJ https://www.encodeproject.org/experiments/ENCSR604VWJ "recombinant protein,transcription factor" eGFP-KLF7-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF172UYR https://www.encodeproject.org/files/ENCFF172UYR/@@download/ENCFF172UYR.bam ENCFF616DSF https://www.encodeproject.org/files/ENCFF616DSF/@@download/ENCFF616DSF.bam 68.8 M 0 66.9 M 0.972 PE 101 101 native 29.0 M 0.0 M 28.6 M 0.832 0.99 0.99 73.59 205 1.08 2.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a2dd06b-4f1f-4874-a0d7-26ede69c5ae1/@@download/cross_correlation_plot/ENCFF613EQSENCFF899AEL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB248JRW michael-snyder:HEK_eGFP-KLF7_FRT_ChIP_L1 "ENCFF899AEL,ENCFF613EQS" HiSeq 2000 2016-09-14T19:39:09.446701+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9kF00369Bb1K2qkpBjVfF ENCSR604VWJ https://www.encodeproject.org/experiments/ENCSR604VWJ "recombinant protein,transcription factor" eGFP-KLF7-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF918HBF https://www.encodeproject.org/files/ENCFF918HBF/@@download/ENCFF918HBF.bam ENCFF925VZS https://www.encodeproject.org/files/ENCFF925VZS/@@download/ENCFF925VZS.bam 73.8 M 0 72.3 M 0.979 PE 101 101 native 32.0 M 0.0 M 31.4 M 0.851 0.98 0.98 53.36 210 1.05 3.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/f72b7956-52c6-4ff2-945e-87713dbbaa3d/@@download/cross_correlation_plot/ENCFF177UXLENCFF568ZTC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB643TMZ michael-snyder:HEK_eGFP-KLF7_FRT_ChIP_L2 "ENCFF568ZTC,ENCFF177UXL" HiSeq 2000 2016-09-14T19:36:34.335761+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9kKj0369JPg0Xjj75v499 ENCSR635NOQ https://www.encodeproject.org/experiments/ENCSR635NOQ "recombinant protein,transcription factor" eGFP-KLF8-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF377HHK https://www.encodeproject.org/files/ENCFF377HHK/@@download/ENCFF377HHK.bam ENCFF398IYS https://www.encodeproject.org/files/ENCFF398IYS/@@download/ENCFF398IYS.bam 61.3 M 0 59.0 M 0.961 PE 101 101 native 25.7 M 0.0 M 25.4 M 0.827 0.99 0.99 83.32 215 1.13 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/646ea945-eaad-4b14-b398-911fb137c46c/@@download/cross_correlation_plot/ENCFF139YALENCFF238JFX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB814MFV michael-snyder:HEK_eGFP-KLF8_FRT_ChIP_L1 "ENCFF238JFX,ENCFF139YAL" HiSeq 2000 2016-09-14T19:26:32.511891+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9XP80369GYv1KkxpKXvJq ENCSR635NOQ https://www.encodeproject.org/experiments/ENCSR635NOQ "recombinant protein,transcription factor" eGFP-KLF8-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF542VGH https://www.encodeproject.org/files/ENCFF542VGH/@@download/ENCFF542VGH.bam ENCFF130JTN https://www.encodeproject.org/files/ENCFF130JTN/@@download/ENCFF130JTN.bam 64.2 M 0 55.3 M 0.862 PE 101 101 native 24.1 M 0.0 M 22.2 M 0.692 0.92 0.92 12.86 170 1.12 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/742a6e1b-d312-47e8-99b4-71d576f67b70/@@download/cross_correlation_plot/ENCFF413XPWENCFF147RGY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB252ROJ michael-snyder:HEK_eGFP-KLF8_FRT_ChIP_L2 "ENCFF413XPW,ENCFF147RGY" HiSeq 2000 2016-09-14T19:27:40.971490+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9XY0036973J1BzVpJ4jJX ENCSR076EZB https://www.encodeproject.org/experiments/ENCSR076EZB "recombinant protein,transcription factor" eGFP-KLF9-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF580LFA https://www.encodeproject.org/files/ENCFF580LFA/@@download/ENCFF580LFA.bam ENCFF451LEO https://www.encodeproject.org/files/ENCFF451LEO/@@download/ENCFF451LEO.bam 69.6 M 0 67.9 M 0.975 PE 101 101 native 29.4 M 0.0 M 29.3 M 0.842 1.00 1.00 233.72 210 1.15 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1080603-6125-4745-9a2c-970bc0978ab2/@@download/cross_correlation_plot/ENCFF589GMJENCFF211WHO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB786ZSN michael-snyder:HEK_eGFP-KLF9_FRT_ChIP_L1 "ENCFF589GMJ,ENCFF211WHO" HiSeq 2000 2016-09-14T19:22:51.770294+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG944803690q324KVG1qPzg ENCSR076EZB https://www.encodeproject.org/experiments/ENCSR076EZB "recombinant protein,transcription factor" eGFP-KLF9-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF303OPV https://www.encodeproject.org/files/ENCFF303OPV/@@download/ENCFF303OPV.bam ENCFF924KRD https://www.encodeproject.org/files/ENCFF924KRD/@@download/ENCFF924KRD.bam 41.7 M 0 40.8 M 0.979 PE 101 101 native 18.0 M 0.0 M 17.9 M 0.861 0.99 0.99 166.90 210 1.15 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/d67175c4-cbb3-4b7e-a830-1b37eff409a0/@@download/cross_correlation_plot/ENCFF413POCENCFF943NZH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB734LTP michael-snyder:HEK_eGFP-KLF9_FRT_ChIP_L2 "ENCFF943NZH,ENCFF413POC" HiSeq 2000 2016-09-14T19:17:59.441785+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG949803690q324KVG1qQ00 ENCSR290SSQ https://www.encodeproject.org/experiments/ENCSR290SSQ "recombinant protein,transcription factor" eGFP-MAZ-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF603XMK https://www.encodeproject.org/files/ENCFF603XMK/@@download/ENCFF603XMK.bam ENCFF902ILU https://www.encodeproject.org/files/ENCFF902ILU/@@download/ENCFF902ILU.bam 69.4 M 0 67.1 M 0.967 PE 101 101 native 29.2 M 0.0 M 29.0 M 0.837 1.00 1.00 200.25 210 1.22 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/ccdddd24-825f-4901-99f1-c3fbe73bb460/@@download/cross_correlation_plot/ENCFF590EUSENCFF463FLS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB404ECP michael-snyder:HEK_eGFP-MAZ_FRT_ChIP_L1 "ENCFF463FLS,ENCFF590EUS" HiSeq 2000 2016-09-14T19:24:17.398837+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8gF00369JPg0Xjj75v3v4 ENCSR290SSQ https://www.encodeproject.org/experiments/ENCSR290SSQ "recombinant protein,transcription factor" eGFP-MAZ-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF663TTK https://www.encodeproject.org/files/ENCFF663TTK/@@download/ENCFF663TTK.bam ENCFF921QFC https://www.encodeproject.org/files/ENCFF921QFC/@@download/ENCFF921QFC.bam 33.1 M 0 32.4 M 0.981 PE 101 101 native 14.4 M 0.0 M 13.9 M 0.839 0.97 0.96 27.69 220 1.17 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/912ca539-a235-4a83-9dfc-177c2ec8310c/@@download/cross_correlation_plot/ENCFF469HPUENCFF944NFT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB107AQP michael-snyder:HEK_eGFP-MAZ_FRT_ChIP_L2 "ENCFF944NFT,ENCFF469HPU" HiSeq 2000 2016-09-14T19:21:09.635193+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8gP8036994Jx4PVBXK9gg ENCSR707BNG https://www.encodeproject.org/experiments/ENCSR707BNG "recombinant protein,transcription factor" eGFP-MYNN-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF229KVP https://www.encodeproject.org/files/ENCFF229KVP/@@download/ENCFF229KVP.bam ENCFF542QTT https://www.encodeproject.org/files/ENCFF542QTT/@@download/ENCFF542QTT.bam 54.4 M 0 53.3 M 0.979 PE 101 101 native 23.5 M 0.0 M 23.4 M 0.860 0.99 0.99 162.69 200 1.07 3.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd82ea36-a3c2-467b-aae5-eed78b5e1f41/@@download/cross_correlation_plot/ENCFF519KJLENCFF610VOU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB968ICB michael-snyder:HEK_eGFP-MYNN_FRT_ChIP_L1 "ENCFF519KJL,ENCFF610VOU" HiSeq 2000 2016-09-14T19:19:05.773536+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG989j03693JZG3y9p8vzk7 ENCSR707BNG https://www.encodeproject.org/experiments/ENCSR707BNG "recombinant protein,transcription factor" eGFP-MYNN-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF027YWU https://www.encodeproject.org/files/ENCFF027YWU/@@download/ENCFF027YWU.bam ENCFF107NWP https://www.encodeproject.org/files/ENCFF107NWP/@@download/ENCFF107NWP.bam 59.1 M 0 56.6 M 0.957 PE 101 101 native 24.8 M 0.0 M 24.7 M 0.836 1.00 1.00 285.84 215 1.08 2.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/948bf5f4-54b3-4c2e-828b-bfcf4523e427/@@download/cross_correlation_plot/ENCFF253DEIENCFF213PFC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB024ZCQ michael-snyder:HEK_eGFP-MYNN_FRT_ChIP_L2 "ENCFF253DEI,ENCFF213PFC" HiSeq 2000 2016-09-14T19:19:25.694065+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG98Kj0369PBbP1x1p94z7b ENCSR324LTM https://www.encodeproject.org/experiments/ENCSR324LTM "recombinant protein,transcription factor" eGFP-OSR2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF396LUF https://www.encodeproject.org/files/ENCFF396LUF/@@download/ENCFF396LUF.bam ENCFF723DGR https://www.encodeproject.org/files/ENCFF723DGR/@@download/ENCFF723DGR.bam 56.3 M 0 55.1 M 0.978 PE 101 101 native 24.3 M 0.0 M 23.7 M 0.842 0.98 0.98 40.92 220 1.20 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca0ca35a-a632-4dc9-b7f7-f5853439bb67/@@download/cross_correlation_plot/ENCFF784CYNENCFF167UWT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB518DEI michael-snyder:HEK_eGFP-OSR2_FRT_ChIP_L1 "ENCFF167UWT,ENCFF784CYN" HiSeq 2000 2016-09-14T19:23:28.559423+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8gZ803695gqq4YJBj8jyF ENCSR324LTM https://www.encodeproject.org/experiments/ENCSR324LTM "recombinant protein,transcription factor" eGFP-OSR2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF159AJM https://www.encodeproject.org/files/ENCFF159AJM/@@download/ENCFF159AJM.bam ENCFF679RNI https://www.encodeproject.org/files/ENCFF679RNI/@@download/ENCFF679RNI.bam 50.1 M 0 48.8 M 0.974 PE 101 101 native 21.5 M 0.0 M 21.3 M 0.850 0.99 0.99 144.03 195 1.15 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/42b324b6-d346-459a-b877-a0c43ff06792/@@download/cross_correlation_plot/ENCFF575MKRENCFF902ARM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB145CQN michael-snyder:HEK_eGFP-OSR2_FRT_ChIP_L2 "ENCFF575MKR,ENCFF902ARM" HiSeq 2000 2016-09-14T19:21:14.798287+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8gjQ03691jV3BQb6PVkx5 ENCSR768LIO https://www.encodeproject.org/experiments/ENCSR768LIO "transcription factor,recombinant protein" eGFP-OVOL3-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF658DQE https://www.encodeproject.org/files/ENCFF658DQE/@@download/ENCFF658DQE.bam ENCFF204BAV https://www.encodeproject.org/files/ENCFF204BAV/@@download/ENCFF204BAV.bam 63.9 M 0 62.5 M 0.979 PE 101 101 native 27.3 M 0.0 M 27.1 M 0.850 0.99 0.99 151.64 205 1.07 2.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/27beec1e-4612-4543-990e-03c451ab5054/@@download/cross_correlation_plot/ENCFF070SVKENCFF917ZPE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB100RZO michael-snyder:HEK_eGFP-OVOL3_FRT_ChIP_L1 "ENCFF070SVK,ENCFF917ZPE" HiSeq 2000 2016-09-14T19:19:52.025386+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9vZj0369Fb155KvKKzQgf ENCSR768LIO https://www.encodeproject.org/experiments/ENCSR768LIO "transcription factor,recombinant protein" eGFP-OVOL3-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF316LIP https://www.encodeproject.org/files/ENCFF316LIP/@@download/ENCFF316LIP.bam ENCFF355SND https://www.encodeproject.org/files/ENCFF355SND/@@download/ENCFF355SND.bam 47.1 M 0 46.1 M 0.979 PE 101 101 native 20.4 M 0.0 M 20.1 M 0.856 0.99 0.99 87.02 210 1.08 3.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/d5a55476-76a9-4446-a14b-8e3238af961e/@@download/cross_correlation_plot/ENCFF416FTWENCFF608PZD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB398GJS michael-snyder:HEK_eGFP-OVOL3_FRT_ChIP_L2 "ENCFF416FTW,ENCFF608PZD" HiSeq 2000 2016-09-14T19:17:35.640461+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9vj80369JpJK47VQfv7Bp ENCSR966ULI https://www.encodeproject.org/experiments/ENCSR966ULI "recombinant protein,transcription factor" eGFP-PATZ1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF259ZGN https://www.encodeproject.org/files/ENCFF259ZGN/@@download/ENCFF259ZGN.bam ENCFF120ZJP https://www.encodeproject.org/files/ENCFF120ZJP/@@download/ENCFF120ZJP.bam 59.8 M 0 58.0 M 0.970 PE 101 101 native 25.3 M 0.0 M 25.1 M 0.839 0.99 0.99 158.71 205 1.13 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/38191636-76f5-4cb8-be64-6a8011edaf80/@@download/cross_correlation_plot/ENCFF809WZPENCFF231IQH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB948OXM michael-snyder:HEK_eGFP-PATZ1_FRT_ChIP_L1 "ENCFF809WZP,ENCFF231IQH" HiSeq 2000 2016-09-14T19:18:52.641237+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9z5Q0369Fb155KvKKzQjv ENCSR966ULI https://www.encodeproject.org/experiments/ENCSR966ULI "recombinant protein,transcription factor" eGFP-PATZ1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF151ECV https://www.encodeproject.org/files/ENCFF151ECV/@@download/ENCFF151ECV.bam ENCFF827RUT https://www.encodeproject.org/files/ENCFF827RUT/@@download/ENCFF827RUT.bam 61.5 M 0 59.4 M 0.967 PE 101 101 native 25.9 M 0.0 M 25.7 M 0.836 0.99 0.99 122.11 200 1.15 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d297351-4fe3-4022-82ec-b1c233c1274d/@@download/cross_correlation_plot/ENCFF413PLSENCFF972SBT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB516DXE michael-snyder:HEK_eGFP-PATZ1_FRT_ChIP_L2 "ENCFF413PLS,ENCFF972SBT" HiSeq 2000 2016-09-14T19:18:15.443219+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9z9803696gGz8k04XPzK7 ENCSR098YLE https://www.encodeproject.org/experiments/ENCSR098YLE "recombinant protein,transcription factor" eGFP-PRDM1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF822FAY https://www.encodeproject.org/files/ENCFF822FAY/@@download/ENCFF822FAY.bam ENCFF409YKN https://www.encodeproject.org/files/ENCFF409YKN/@@download/ENCFF409YKN.bam 94.5 M 0 91.3 M 0.967 PE 101 101 native 39.1 M 0.0 M 39.0 M 0.824 1.00 1.00 330.15 205 1.12 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/db663cd6-421e-41f0-af90-44ed1b4bdbec/@@download/cross_correlation_plot/ENCFF691EHPENCFF246IMR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB138UPY michael-snyder:HEK_eGFP-PRDM1_FRT_ChIP_L1 "ENCFF691EHP,ENCFF246IMR" HiSeq 2000 2016-09-14T19:27:54.586833+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8vv003691jV3BQb6PVkzp ENCSR098YLE https://www.encodeproject.org/experiments/ENCSR098YLE "recombinant protein,transcription factor" eGFP-PRDM1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF126ZGI https://www.encodeproject.org/files/ENCFF126ZGI/@@download/ENCFF126ZGI.bam ENCFF927AFN https://www.encodeproject.org/files/ENCFF927AFN/@@download/ENCFF927AFN.bam 75.6 M 0 73.4 M 0.970 PE 101 101 native 31.5 M 0.0 M 31.5 M 0.832 1.00 1.00 413.45 210 1.14 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/f785a4bf-c5b1-4c5a-bdaf-22c423850c75/@@download/cross_correlation_plot/ENCFF110KHMENCFF861XPL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB267TEY michael-snyder:HEK_eGFP-PRDM1_FRT_ChIP_L2 "ENCFF861XPL,ENCFF110KHM" HiSeq 2000 2016-09-14T19:24:33.736119+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8x1j0369PBbP1x1p94z42 ENCSR223TAV https://www.encodeproject.org/experiments/ENCSR223TAV "recombinant protein,transcription factor" eGFP-PRDM10-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF642MUY https://www.encodeproject.org/files/ENCFF642MUY/@@download/ENCFF642MUY.bam ENCFF519UBP https://www.encodeproject.org/files/ENCFF519UBP/@@download/ENCFF519UBP.bam 51.8 M 0 50.2 M 0.968 PE 101 101 native 21.9 M 0.0 M 21.7 M 0.837 0.99 0.99 129.57 230 1.60 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/d4b2da98-174e-4b17-a382-6b6d1b3052a9/@@download/cross_correlation_plot/ENCFF071KJLENCFF764PLC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB753VDZ michael-snyder:HEK_eGFP-PRDM10_FRT_ChIP_L1 "ENCFF071KJL,ENCFF764PLC" HiSeq 2000 2016-09-14T19:21:08.427866+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG90X8036994Jx4PVBXK9vg ENCSR223TAV https://www.encodeproject.org/experiments/ENCSR223TAV "recombinant protein,transcription factor" eGFP-PRDM10-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF449CDS https://www.encodeproject.org/files/ENCFF449CDS/@@download/ENCFF449CDS.bam ENCFF269ULE https://www.encodeproject.org/files/ENCFF269ULE/@@download/ENCFF269ULE.bam 49.4 M 0 47.7 M 0.966 PE 101 101 native 20.8 M 0.0 M 20.6 M 0.836 0.99 0.99 139.39 225 1.67 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/e467e181-4b5b-4761-90c3-fd5dd5cee80e/@@download/cross_correlation_plot/ENCFF445ZKXENCFF804SFA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB130VTD michael-snyder:HEK_eGFP-PRDM10_FRT_ChIP_L2 "ENCFF804SFA,ENCFF445ZKX" HiSeq 2000 2016-09-14T19:20:57.571261+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG90f80369PzggBJ5BgpJg9 ENCSR760AAY https://www.encodeproject.org/experiments/ENCSR760AAY "recombinant protein,transcription factor" eGFP-PRDM12-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF526BRU https://www.encodeproject.org/files/ENCFF526BRU/@@download/ENCFF526BRU.bam ENCFF242BNA https://www.encodeproject.org/files/ENCFF242BNA/@@download/ENCFF242BNA.bam 40.4 M 0 38.3 M 0.948 PE 101 101 native 17.0 M 0.0 M 15.5 M 0.768 0.91 0.91 11.33 200 1.10 4.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/f223ad6a-f7cd-4273-a7df-20547368c7c6/@@download/cross_correlation_plot/ENCFF923WINENCFF518DXW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB022DDK michael-snyder:HEK_eGFP-PRDM12_FRT_ChIP_L1 "ENCFF923WIN,ENCFF518DXW" HiSeq 2000 2016-09-14T19:25:46.648081+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9V0Q03695XjQpy58BVJ4p ENCSR760AAY https://www.encodeproject.org/experiments/ENCSR760AAY "recombinant protein,transcription factor" eGFP-PRDM12-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF574UFQ https://www.encodeproject.org/files/ENCFF574UFQ/@@download/ENCFF574UFQ.bam ENCFF349HGP https://www.encodeproject.org/files/ENCFF349HGP/@@download/ENCFF349HGP.bam 41.3 M 0 40.0 M 0.969 PE 101 101 native 17.8 M 0.0 M 16.4 M 0.793 0.92 0.92 12.57 215 1.08 5.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/536c9154-b3b9-4248-96d8-43882f616b06/@@download/cross_correlation_plot/ENCFF909GZYENCFF728GHG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB417TKQ michael-snyder:HEK_eGFP-PRDM12_FRT_ChIP_L2 "ENCFF728GHG,ENCFF909GZY" HiSeq 2000 2016-09-14T19:26:06.065193+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9V480369GX4Qp1Gv13gKq ENCSR714LYA https://www.encodeproject.org/experiments/ENCSR714LYA "recombinant protein,transcription factor" eGFP-PRDM2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF095SWL https://www.encodeproject.org/files/ENCFF095SWL/@@download/ENCFF095SWL.bam ENCFF194XDH https://www.encodeproject.org/files/ENCFF194XDH/@@download/ENCFF194XDH.bam 109.2 M 0 106.0 M 0.970 PE 101 101 native 46.3 M 0.0 M 44.4 M 0.813 0.96 0.96 24.36 225 1.04 3.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/da9a8a03-e6ca-4e00-8358-3940ce376266/@@download/cross_correlation_plot/ENCFF331FYRENCFF374FPM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB563IED michael-snyder:HEK_eGFP-PRDM2_FRT_ChIP_L1 "ENCFF374FPM,ENCFF331FYR" HiSeq 4000 2016-09-13T16:23:55.543152+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgZ680369JpJK47VQfv1Fk ENCSR714LYA https://www.encodeproject.org/experiments/ENCSR714LYA "recombinant protein,transcription factor" eGFP-PRDM2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF240WIT https://www.encodeproject.org/files/ENCFF240WIT/@@download/ENCFF240WIT.bam ENCFF338MLX https://www.encodeproject.org/files/ENCFF338MLX/@@download/ENCFF338MLX.bam 132.6 M 0 129.4 M 0.976 PE 101 101 native 56.4 M 0.0 M 53.7 M 0.809 0.95 0.95 20.06 235 1.03 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/d99fab18-9d8f-4277-a80c-077453efb293/@@download/cross_correlation_plot/ENCFF655ROQENCFF112OGR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB127IUL michael-snyder:HEK_eGFP-PRDM2_FRT_ChIP_L2 "ENCFF112OGR,ENCFF655ROQ" HiSeq 4000 2016-09-13T16:25:19.051720+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgZBQ03698GBQPfZ4kgp95 ENCSR443MVV https://www.encodeproject.org/experiments/ENCSR443MVV "recombinant protein,transcription factor" eGFP-PRDM4-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF916TXZ https://www.encodeproject.org/files/ENCFF916TXZ/@@download/ENCFF916TXZ.bam ENCFF845QDX https://www.encodeproject.org/files/ENCFF845QDX/@@download/ENCFF845QDX.bam 62.3 M 0 60.7 M 0.975 PE 101 101 native 26.4 M 0.0 M 26.2 M 0.840 0.99 0.99 142.11 200 1.12 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ac19018-8342-4bf0-86d4-f046e729d01a/@@download/cross_correlation_plot/ENCFF305RJUENCFF903QJF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB949YFY michael-snyder:HEK_eGFP-PRDM4_FRT_ChIP_L2 "ENCFF903QJF,ENCFF305RJU" HiSeq 2000 2016-09-14T19:22:40.200093+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8fB00369JP9931xpgP8qf ENCSR443MVV https://www.encodeproject.org/experiments/ENCSR443MVV "recombinant protein,transcription factor" eGFP-PRDM4-human HEK293 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF210DLI https://www.encodeproject.org/files/ENCFF210DLI/@@download/ENCFF210DLI.bam ENCFF166MYD https://www.encodeproject.org/files/ENCFF166MYD/@@download/ENCFF166MYD.bam 64.1 M 0 60.7 M 0.948 PE 101 101 native 27.0 M 0.0 M 26.6 M 0.831 0.99 0.99 72.46 190 1.13 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb24f719-8461-47e1-bc20-6d37f203e336/@@download/cross_correlation_plot/ENCFF842HVLENCFF642UJL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB853TZR michael-snyder:HEK_eGFP-PRDM4_FRT_ChIP_L3 "ENCFF842HVL,ENCFF642UJL" HiSeq 2000 2017-02-08T04:32:38.835465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J3zKj03696V163FPx50Gx7 ENCSR892QHR https://www.encodeproject.org/experiments/ENCSR892QHR "recombinant protein,transcription factor" eGFP-PRDM6-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF335GRT https://www.encodeproject.org/files/ENCFF335GRT/@@download/ENCFF335GRT.bam ENCFF782ZLH https://www.encodeproject.org/files/ENCFF782ZLH/@@download/ENCFF782ZLH.bam 47.6 M 0 46.8 M 0.983 PE 101 101 native 20.9 M 0.0 M 20.8 M 0.874 1.00 1.00 300.63 210 1.39 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/d40af1fd-5ada-487a-a441-ec0c37a9f657/@@download/cross_correlation_plot/ENCFF622VFMENCFF279ILV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB739OBC michael-snyder:HEK_eGFP-PRDM6_FRT_ChIP_L1 "ENCFF622VFM,ENCFF279ILV" HiSeq 2000 2017-03-04T18:18:34.769531+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv7Z80369K8ZkZ817vy59Q ENCSR892QHR https://www.encodeproject.org/experiments/ENCSR892QHR "recombinant protein,transcription factor" eGFP-PRDM6-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF643PRF https://www.encodeproject.org/files/ENCFF643PRF/@@download/ENCFF643PRF.bam ENCFF622ITJ https://www.encodeproject.org/files/ENCFF622ITJ/@@download/ENCFF622ITJ.bam 91.7 M 0 89.2 M 0.973 PE 101 101 native 38.2 M 0.0 M 37.1 M 0.810 0.97 0.97 35.38 170 1.19 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/c418b3ad-46c2-4840-8e7f-1e30b74a352a/@@download/cross_correlation_plot/ENCFF889XNLENCFF586TBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB710IXD michael-snyder:HEK_eGFP-PRDM6_FRT_ChIP_L2 "ENCFF889XNL,ENCFF586TBV" HiSeq 2000 2017-03-04T18:25:55.017219+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv7zQ03690BfbX8251GGgJ ENCSR441UBA https://www.encodeproject.org/experiments/ENCSR441UBA "recombinant protein,transcription factor" eGFP-RBAK-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF434TKE https://www.encodeproject.org/files/ENCFF434TKE/@@download/ENCFF434TKE.bam ENCFF627FHL https://www.encodeproject.org/files/ENCFF627FHL/@@download/ENCFF627FHL.bam 57.2 M 0 53.9 M 0.943 PE 101 101 native 23.6 M 0.0 M 22.9 M 0.800 0.97 0.97 34.61 215 1.06 4.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f57be18-71dc-4c33-bcb3-9fe94d8e1e3e/@@download/cross_correlation_plot/ENCFF470VSNENCFF752RBW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB065MTT michael-snyder:HEK_eGFP-RBAK_FRT_ChIP_L1 "ENCFF470VSN,ENCFF752RBW" HiSeq 2000 2016-12-15T03:11:09.789892+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFfj0369J92qZ2Bf628B9 ENCSR441UBA https://www.encodeproject.org/experiments/ENCSR441UBA "recombinant protein,transcription factor" eGFP-RBAK-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF658VID https://www.encodeproject.org/files/ENCFF658VID/@@download/ENCFF658VID.bam ENCFF368YCU https://www.encodeproject.org/files/ENCFF368YCU/@@download/ENCFF368YCU.bam 70.0 M 0 66.0 M 0.943 PE 101 101 native 28.8 M 0.0 M 28.0 M 0.799 0.97 0.97 34.96 220 1.05 4.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/959a05ba-7e46-406c-9df8-87862174a0b9/@@download/cross_correlation_plot/ENCFF108NAIENCFF459YDW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB964HRE michael-snyder:HEK_eGFP-RBAK_FRT_ChIP_L2 "ENCFF459YDW,ENCFF108NAI" HiSeq 2000 2016-12-15T06:12:56.710075+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJ1j0369P8qVgK8XbYyFV ENCSR146NLL https://www.encodeproject.org/experiments/ENCSR146NLL "RNA binding protein,transcription factor,recombinant protein" eGFP-REPIN1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF533XCY https://www.encodeproject.org/files/ENCFF533XCY/@@download/ENCFF533XCY.bam ENCFF214DTX https://www.encodeproject.org/files/ENCFF214DTX/@@download/ENCFF214DTX.bam 78.6 M 0 76.6 M 0.974 PE 101 101 native 33.3 M 0.0 M 33.2 M 0.843 1.00 1.00 361.37 215 1.05 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/be276433-84a7-4438-834c-b0257f533c85/@@download/cross_correlation_plot/ENCFF685PQBENCFF421SXH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB196JIW michael-snyder:HEK_eGFP-REPIN1_FRT_ChIP_L1 "ENCFF685PQB,ENCFF421SXH" HiSeq 2000 2016-09-14T19:28:50.222843+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Z4003690q324KVG1qQ3f ENCSR146NLL https://www.encodeproject.org/experiments/ENCSR146NLL "RNA binding protein,transcription factor,recombinant protein" eGFP-REPIN1-human HEK293 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF071SPF https://www.encodeproject.org/files/ENCFF071SPF/@@download/ENCFF071SPF.bam ENCFF757FYN https://www.encodeproject.org/files/ENCFF757FYN/@@download/ENCFF757FYN.bam 30.9 M 0 30.3 M 0.982 PE 101 101 native 13.6 M 0.0 M 13.3 M 0.864 0.98 0.98 66.06 210 1.10 5.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5f8416c-f46c-405f-93af-c370f84174ff/@@download/cross_correlation_plot/ENCFF629DECENCFF311EFD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB650WFT michael-snyder:HEK_eGFP-REPIN1_FRT_ChIP_L3 "ENCFF311EFD,ENCFF629DEC" HiSeq 2000 2017-02-08T04:30:57.844070+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J3y2j03693jxfkJ697j22z ENCSR896UBV https://www.encodeproject.org/experiments/ENCSR896UBV "recombinant protein,transcription factor,chromatin remodeller" eGFP-REST-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF306VSK https://www.encodeproject.org/files/ENCFF306VSK/@@download/ENCFF306VSK.bam ENCFF061PFQ https://www.encodeproject.org/files/ENCFF061PFQ/@@download/ENCFF061PFQ.bam 72.9 M 0 68.6 M 0.941 PE 101 101 native 30.2 M 0.0 M 29.4 M 0.806 0.98 0.98 40.20 195 1.11 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/52eae89a-3b87-43eb-9bc0-5bfc4df56f67/@@download/cross_correlation_plot/ENCFF807MLKENCFF846CXS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB876EJP michael-snyder:HEK_eGFP-REST_FRT_ChIP_L1 "ENCFF807MLK,ENCFF846CXS" HiSeq 2000 2016-09-14T19:21:09.850507+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG94g003695gqq4YJBj8k5K ENCSR896UBV https://www.encodeproject.org/experiments/ENCSR896UBV "recombinant protein,transcription factor,chromatin remodeller" eGFP-REST-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF986TQA https://www.encodeproject.org/files/ENCFF986TQA/@@download/ENCFF986TQA.bam ENCFF139EUW https://www.encodeproject.org/files/ENCFF139EUW/@@download/ENCFF139EUW.bam 50.5 M 0 48.2 M 0.954 PE 101 101 native 21.3 M 0.0 M 20.8 M 0.822 0.98 0.98 42.32 220 1.14 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/273a8696-1cbd-4f33-9c2f-7620d96186b9/@@download/cross_correlation_plot/ENCFF774HWWENCFF554YBC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB439YDP michael-snyder:HEK_eGFP-REST_FRT_ChIP_L2 "ENCFF554YBC,ENCFF774HWW" HiSeq 2000 2016-09-14T19:18:30.691407+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG94qQ0369PzggBJ5BgpJk2 ENCSR041ZIQ https://www.encodeproject.org/experiments/ENCSR041ZIQ "recombinant protein,transcription factor" eGFP-SALL1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF990UII https://www.encodeproject.org/files/ENCFF990UII/@@download/ENCFF990UII.bam ENCFF209CHH https://www.encodeproject.org/files/ENCFF209CHH/@@download/ENCFF209CHH.bam 60.8 M 0 56.4 M 0.928 PE 101 101 native 24.7 M 0.0 M 24.5 M 0.806 0.99 0.99 120.67 195 1.07 3.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/f87d306f-f915-41e2-b2ba-0d65264d7bd3/@@download/cross_correlation_plot/ENCFF696BLEENCFF185TWT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB768TDT michael-snyder:HEK_eGFP-SALL1_FRT_ChIP_L1 "ENCFF696BLE,ENCFF185TWT" HiSeq 2000 2016-12-09T01:44:56.766093+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F14qQ0Q0369Bxb30J6x5b05j ENCSR041ZIQ https://www.encodeproject.org/experiments/ENCSR041ZIQ "recombinant protein,transcription factor" eGFP-SALL1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF122PNY https://www.encodeproject.org/files/ENCFF122PNY/@@download/ENCFF122PNY.bam ENCFF334LDR https://www.encodeproject.org/files/ENCFF334LDR/@@download/ENCFF334LDR.bam 62.2 M 0 60.8 M 0.979 PE 101 101 native 26.8 M 0.0 M 26.4 M 0.850 0.98 0.98 65.85 200 1.06 4.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a11b02d-9236-48b5-9e75-f5dad337a767/@@download/cross_correlation_plot/ENCFF453SOGENCFF330LTF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB879EFD michael-snyder:HEK_eGFP-SALL1_FRT_ChIP_L2 "ENCFF330LTF,ENCFF453SOG" HiSeq 2000 2016-12-09T02:17:01.818383+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F14qQ5j0369Bxb30J6x5b065 ENCSR044FMM https://www.encodeproject.org/experiments/ENCSR044FMM "recombinant protein,transcription factor" eGFP-SALL2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF764FEJ https://www.encodeproject.org/files/ENCFF764FEJ/@@download/ENCFF764FEJ.bam ENCFF217EFC https://www.encodeproject.org/files/ENCFF217EFC/@@download/ENCFF217EFC.bam 91.7 M 0 89.0 M 0.971 PE 101 101 native 37.9 M 0.0 M 34.7 M 0.758 0.92 0.92 11.72 210 1.05 3.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/772a3902-0a04-43f9-a688-e284395a9992/@@download/cross_correlation_plot/ENCFF009REXENCFF781ZAP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB004XUE michael-snyder:HEK_eGFP-SALL2_FRT_ChIP_L1 "ENCFF009REX,ENCFF781ZAP" HiSeq 4000 2017-02-14T17:37:30.516507+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0v400369B35pQ3K5v3B20 ENCSR044FMM https://www.encodeproject.org/experiments/ENCSR044FMM "recombinant protein,transcription factor" eGFP-SALL2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF196XHX https://www.encodeproject.org/files/ENCFF196XHX/@@download/ENCFF196XHX.bam ENCFF405TLF https://www.encodeproject.org/files/ENCFF405TLF/@@download/ENCFF405TLF.bam 89.9 M 0 87.4 M 0.972 PE 101 101 native 37.5 M 0.0 M 33.8 M 0.752 0.90 0.90 9.66 215 1.05 3.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b816459-c119-4d8d-a899-e5e51823fae3/@@download/cross_correlation_plot/ENCFF998QDVENCFF524IZD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB243VTX michael-snyder:HEK_eGFP-SALL2_FRT_ChIP_L2 "ENCFF998QDV,ENCFF524IZD" HiSeq 4000 2017-02-14T17:36:13.107180+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0vq003699pvb33x8VVg8j ENCSR605MGM https://www.encodeproject.org/experiments/ENCSR605MGM "transcription factor,recombinant protein" eGFP-SCRT1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF282CAW https://www.encodeproject.org/files/ENCFF282CAW/@@download/ENCFF282CAW.bam ENCFF294YEJ https://www.encodeproject.org/files/ENCFF294YEJ/@@download/ENCFF294YEJ.bam 88.1 M 0 86.5 M 0.981 PE 101 101 native 38.2 M 0.0 M 37.9 M 0.859 0.99 0.99 105.68 210 1.06 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/04eed677-731e-423e-801e-8ac168087c3f/@@download/cross_correlation_plot/ENCFF783NLAENCFF202RSF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB199UQA michael-snyder:HEK_eGFP-SCRT1_FRT_ChIP_L1 "ENCFF202RSF,ENCFF783NLA" HiSeq 2000 2016-09-14T19:26:12.057562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG91g00369PBbP1x1p94z58 ENCSR605MGM https://www.encodeproject.org/experiments/ENCSR605MGM "transcription factor,recombinant protein" eGFP-SCRT1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF948DEA https://www.encodeproject.org/files/ENCFF948DEA/@@download/ENCFF948DEA.bam ENCFF931UNE https://www.encodeproject.org/files/ENCFF931UNE/@@download/ENCFF931UNE.bam 72.0 M 0 70.6 M 0.981 PE 101 101 native 31.2 M 0.0 M 30.9 M 0.860 0.99 0.99 156.51 225 1.06 2.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/23eda8e4-0f8d-49ef-a064-814b8b01a514/@@download/cross_correlation_plot/ENCFF029VAXENCFF251KLG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB650KPF michael-snyder:HEK_eGFP-SCRT1_FRT_ChIP_L2 "ENCFF029VAX,ENCFF251KLG" HiSeq 2000 2016-09-14T19:22:02.406863+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG91q003690q324KVG1qPy8 ENCSR338DGO https://www.encodeproject.org/experiments/ENCSR338DGO "transcription factor,recombinant protein" eGFP-SCRT2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF667QVL https://www.encodeproject.org/files/ENCFF667QVL/@@download/ENCFF667QVL.bam ENCFF419PJL https://www.encodeproject.org/files/ENCFF419PJL/@@download/ENCFF419PJL.bam 135.0 M 0 131.9 M 0.977 PE 101 101 native 57.8 M 0.0 M 55.4 M 0.821 0.96 0.96 24.38 230 1.11 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/1951d2f3-f7a7-4faa-a1e6-9a4ba785b35d/@@download/cross_correlation_plot/ENCFF539QEYENCFF709VMO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB160EOD michael-snyder:HEK_eGFP-SCRT2_FRT_ChIP_L1 "ENCFF539QEY,ENCFF709VMO" HiSeq 4000 2016-09-13T16:25:45.943072+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgZP80369PBkYfgj4Z3K47 ENCSR338DGO https://www.encodeproject.org/experiments/ENCSR338DGO "transcription factor,recombinant protein" eGFP-SCRT2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF946HGR https://www.encodeproject.org/files/ENCFF946HGR/@@download/ENCFF946HGR.bam ENCFF479EEH https://www.encodeproject.org/files/ENCFF479EEH/@@download/ENCFF479EEH.bam 99.9 M 0 97.2 M 0.973 PE 101 101 native 42.6 M 0.0 M 40.9 M 0.818 0.96 0.96 24.02 230 1.14 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0f97e3d-1b07-4667-a3d8-819e2ee8ab62/@@download/cross_correlation_plot/ENCFF858OMDENCFF781UOJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB884UKM michael-snyder:HEK_eGFP-SCRT2_FRT_ChIP_L2 "ENCFF781UOJ,ENCFF858OMD" HiSeq 4000 2016-09-13T16:22:04.393526+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgZXj03696gGz8k04XPgvJ ENCSR807LQP https://www.encodeproject.org/experiments/ENCSR807LQP "recombinant protein,transcription factor" eGFP-SP2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF615BCC https://www.encodeproject.org/files/ENCFF615BCC/@@download/ENCFF615BCC.bam ENCFF833UAX https://www.encodeproject.org/files/ENCFF833UAX/@@download/ENCFF833UAX.bam 73.7 M 0 71.7 M 0.973 PE 101 101 native 31.5 M 0.0 M 31.4 M 0.853 1.00 1.00 303.50 195 1.68 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd8acba1-7e1e-4ba3-87b5-5b349db0cfdb/@@download/cross_correlation_plot/ENCFF840CULENCFF321HWW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB140NEY michael-snyder:HEK_eGFP-SP2_FRT_ChIP_L1 "ENCFF321HWW,ENCFF840CUL" HiSeq 2000 2016-09-14T19:28:39.957337+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Xgj0369GYv1KkxpKXvK7 ENCSR807LQP https://www.encodeproject.org/experiments/ENCSR807LQP "recombinant protein,transcription factor" eGFP-SP2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF067KIS https://www.encodeproject.org/files/ENCFF067KIS/@@download/ENCFF067KIS.bam ENCFF604QHT https://www.encodeproject.org/files/ENCFF604QHT/@@download/ENCFF604QHT.bam 68.7 M 0 67.0 M 0.975 PE 101 101 native 29.6 M 0.0 M 29.5 M 0.858 1.00 1.00 321.75 205 1.72 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc4d2233-0c97-4587-8cb7-10a9fc4536b7/@@download/cross_correlation_plot/ENCFF645LBSENCFF269DXT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB820SRC michael-snyder:HEK_eGFP-SP2_FRT_ChIP_L2 "ENCFF269DXT,ENCFF645LBS" HiSeq 2000 2016-09-14T19:27:56.756570+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Xqj0369F1Xf4jx84ZFXP ENCSR141PZA https://www.encodeproject.org/experiments/ENCSR141PZA "recombinant protein,transcription factor" eGFP-SP3-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF987ZJY https://www.encodeproject.org/files/ENCFF987ZJY/@@download/ENCFF987ZJY.bam ENCFF511BJO https://www.encodeproject.org/files/ENCFF511BJO/@@download/ENCFF511BJO.bam 52.1 M 0 49.5 M 0.951 PE 101 101 native 21.7 M 0.0 M 21.3 M 0.816 0.98 0.98 51.13 220 1.21 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/da2dca32-117f-4264-879d-d74ff6d7d962/@@download/cross_correlation_plot/ENCFF146VSJENCFF115RSO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB797TMH michael-snyder:HEK_eGFP-SP3_FRT_ChIP_L1 "ENCFF115RSO,ENCFF146VSJ" HiSeq 2000 2016-09-14T19:37:16.659647+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9k1Q0369JP9931xpgPBy0 ENCSR141PZA https://www.encodeproject.org/experiments/ENCSR141PZA "recombinant protein,transcription factor" eGFP-SP3-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF009XYU https://www.encodeproject.org/files/ENCFF009XYU/@@download/ENCFF009XYU.bam ENCFF651QJM https://www.encodeproject.org/files/ENCFF651QJM/@@download/ENCFF651QJM.bam 59.4 M 0 55.6 M 0.936 PE 101 101 native 24.2 M 0.0 M 23.5 M 0.792 0.97 0.97 35.92 220 1.18 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/c72c0af5-c109-4fea-a126-4e6c68224e1d/@@download/cross_correlation_plot/ENCFF253QUPENCFF743IFE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB526QAW michael-snyder:HEK_eGFP-SP3_FRT_ChIP_L2 "ENCFF743IFE,ENCFF253QUP" HiSeq 2000 2016-09-14T19:37:41.714843+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9k5j03690q324KVG1qQ5y ENCSR468IJT https://www.encodeproject.org/experiments/ENCSR468IJT "recombinant protein,transcription factor" eGFP-SP7-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF135MMH https://www.encodeproject.org/files/ENCFF135MMH/@@download/ENCFF135MMH.bam ENCFF697RSU https://www.encodeproject.org/files/ENCFF697RSU/@@download/ENCFF697RSU.bam 68.8 M 0 66.9 M 0.972 PE 101 101 native 29.5 M 0.0 M 29.3 M 0.851 0.99 0.99 118.56 210 1.16 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/803de902-e592-4613-a311-9e4ee813d95a/@@download/cross_correlation_plot/ENCFF741TKMENCFF605WDX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB544MOG michael-snyder:HEK_eGFP-SP7_FRT_ChIP_L1 "ENCFF605WDX,ENCFF741TKM" HiSeq 2000 2016-09-14T19:20:01.069639+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9y100369Kkk1Yvk89K1Zj ENCSR468IJT https://www.encodeproject.org/experiments/ENCSR468IJT "recombinant protein,transcription factor" eGFP-SP7-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF082UFQ https://www.encodeproject.org/files/ENCFF082UFQ/@@download/ENCFF082UFQ.bam ENCFF943JWH https://www.encodeproject.org/files/ENCFF943JWH/@@download/ENCFF943JWH.bam 68.9 M 0 66.7 M 0.968 PE 101 101 native 29.3 M 0.0 M 29.0 M 0.843 0.99 0.99 96.89 215 1.16 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/77cb20a4-2e73-4698-8199-5b02b5c99e9b/@@download/cross_correlation_plot/ENCFF234GIAENCFF134EEH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB419BYD michael-snyder:HEK_eGFP-SP7_FRT_ChIP_L2 "ENCFF234GIA,ENCFF134EEH" HiSeq 2000 2016-09-14T19:21:10.288855+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9y500369F1Xf4jx84ZFj2 ENCSR217WRC https://www.encodeproject.org/experiments/ENCSR217WRC "recombinant protein,transcription factor" eGFP-TSHZ1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF089WVR https://www.encodeproject.org/files/ENCFF089WVR/@@download/ENCFF089WVR.bam ENCFF193WUI https://www.encodeproject.org/files/ENCFF193WUI/@@download/ENCFF193WUI.bam 71.5 M 0 69.0 M 0.966 PE 101 101 native 30.5 M 0.0 M 30.3 M 0.847 0.99 0.99 166.78 185 1.07 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/e88a2520-5ca8-4bb4-96a5-f0f338adb3d2/@@download/cross_correlation_plot/ENCFF945NKOENCFF282WYC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB443YBZ michael-snyder:HEK_eGFP-TSHZ1_FRT_ChIP_L1 "ENCFF282WYC,ENCFF945NKO" HiSeq 2000 2016-09-14T19:21:34.630524+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG92F8036997y2b0k8qBJP7 ENCSR217WRC https://www.encodeproject.org/experiments/ENCSR217WRC "recombinant protein,transcription factor" eGFP-TSHZ1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF978XJH https://www.encodeproject.org/files/ENCFF978XJH/@@download/ENCFF978XJH.bam ENCFF606ORD https://www.encodeproject.org/files/ENCFF606ORD/@@download/ENCFF606ORD.bam 58.5 M 0 56.7 M 0.969 PE 101 101 native 24.6 M 0.0 M 24.3 M 0.832 0.99 0.99 84.36 200 1.08 3.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5dc80c8-f669-46df-88ee-1c6301acbf74/@@download/cross_correlation_plot/ENCFF147LKMENCFF319KBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB733OPG michael-snyder:HEK_eGFP-TSHZ1_FRT_ChIP_L2 "ENCFF147LKM,ENCFF319KBV" HiSeq 2000 2016-09-14T19:21:44.624810+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG92Kj03690qG5Zzk849xj9 ENCSR966PJJ https://www.encodeproject.org/experiments/ENCSR966PJJ "recombinant protein,transcription factor" eGFP-WT1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF097CBF https://www.encodeproject.org/files/ENCFF097CBF/@@download/ENCFF097CBF.bam ENCFF959FOS https://www.encodeproject.org/files/ENCFF959FOS/@@download/ENCFF959FOS.bam 47.3 M 0 45.7 M 0.968 PE 101 101 native 20.3 M 0.0 M 20.2 M 0.853 0.99 0.99 108.11 200 1.19 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/09a76e8d-4748-4a22-87c6-35fa43a56ab9/@@download/cross_correlation_plot/ENCFF999JFCENCFF179CUG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB441RRJ michael-snyder:HEK_eGFP-WT1_FRT_ChIP_L1 "ENCFF999JFC,ENCFF179CUG" HiSeq 2000 2016-09-14T19:21:03.008826+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8fP803692xk39gZV143yf ENCSR966PJJ https://www.encodeproject.org/experiments/ENCSR966PJJ "recombinant protein,transcription factor" eGFP-WT1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF493ODC https://www.encodeproject.org/files/ENCFF493ODC/@@download/ENCFF493ODC.bam ENCFF225TQR https://www.encodeproject.org/files/ENCFF225TQR/@@download/ENCFF225TQR.bam 74.2 M 0 70.6 M 0.952 PE 101 101 native 30.7 M 0.0 M 30.1 M 0.811 0.98 0.98 52.24 200 1.13 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcdf4a78-fa2a-46d5-85a0-d09e76c84226/@@download/cross_correlation_plot/ENCFF053VVJENCFF474NQE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB320JQH michael-snyder:HEK_eGFP-WT1_FRT_ChIP_L2 "ENCFF474NQE,ENCFF053VVJ" HiSeq 2000 2016-09-14T19:25:24.777912+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8fZ00369Kkk1Yvk89K0p9 ENCSR692HSE https://www.encodeproject.org/experiments/ENCSR692HSE "transcription factor,recombinant protein" eGFP-YY2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF907EKW https://www.encodeproject.org/files/ENCFF907EKW/@@download/ENCFF907EKW.bam ENCFF406IXK https://www.encodeproject.org/files/ENCFF406IXK/@@download/ENCFF406IXK.bam 67.6 M 0 64.9 M 0.961 PE 101 101 native 27.7 M 0.0 M 27.6 M 0.815 1.00 1.00 212.11 200 1.07 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/94102ead-74ff-476f-98b5-ed33ea91f21f/@@download/cross_correlation_plot/ENCFF268FKSENCFF011RLG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB956ALA michael-snyder:HEK_eGFP-YY2_FRT_ChIP_L1 "ENCFF011RLG,ENCFF268FKS" HiSeq 2000 2016-12-15T06:13:36.060623+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qGQ00369G1Z412B01V1z1 ENCSR692HSE https://www.encodeproject.org/experiments/ENCSR692HSE "transcription factor,recombinant protein" eGFP-YY2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF193QGE https://www.encodeproject.org/files/ENCFF193QGE/@@download/ENCFF193QGE.bam ENCFF055KHV https://www.encodeproject.org/files/ENCFF055KHV/@@download/ENCFF055KHV.bam 77.8 M 0 75.1 M 0.966 PE 101 101 native 32.1 M 0.0 M 31.9 M 0.820 1.00 1.00 205.14 205 1.07 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb338185-3db8-4cf9-9a8e-afee7fc04227/@@download/cross_correlation_plot/ENCFF237ACYENCFF258AHN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB633LUB michael-snyder:HEK_eGFP-YY2_FRT_ChIP_L2 "ENCFF258AHN,ENCFF237ACY" HiSeq 2000 2016-12-15T06:14:42.596828+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJ2803695fJKb0K3Z5kVQ ENCSR927UJQ https://www.encodeproject.org/experiments/ENCSR927UJQ "recombinant protein,transcription factor" eGFP-ZBTB1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF363YEP https://www.encodeproject.org/files/ENCFF363YEP/@@download/ENCFF363YEP.bam ENCFF286GBE https://www.encodeproject.org/files/ENCFF286GBE/@@download/ENCFF286GBE.bam 52.8 M 0 49.5 M 0.938 PE 101 101 native 21.7 M 0.0 M 21.4 M 0.811 0.99 0.99 70.39 195 1.08 3.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/51bd13fa-5774-46c5-89d8-121f689d1dc5/@@download/cross_correlation_plot/ENCFF022TFFENCFF960UFT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB055XCX michael-snyder:HEK_eGFP-ZBTB1_FRT_ChIP_L1 "ENCFF022TFF,ENCFF960UFT" HiSeq 2000 2016-09-14T19:20:05.838938+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG975Q03690qG5Zzk849xk7 ENCSR927UJQ https://www.encodeproject.org/experiments/ENCSR927UJQ "recombinant protein,transcription factor" eGFP-ZBTB1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF744DHU https://www.encodeproject.org/files/ENCFF744DHU/@@download/ENCFF744DHU.bam ENCFF882ZLY https://www.encodeproject.org/files/ENCFF882ZLY/@@download/ENCFF882ZLY.bam 55.6 M 0 51.9 M 0.934 PE 101 101 native 22.9 M 0.0 M 22.6 M 0.813 0.98 0.98 66.39 190 1.08 3.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/65f5996c-2afe-4c47-93fb-98ba3996f275/@@download/cross_correlation_plot/ENCFF707MCDENCFF132YCG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB716AGX michael-snyder:HEK_eGFP-ZBTB1_FRT_ChIP_L2 "ENCFF707MCD,ENCFF132YCG" HiSeq 2000 2016-09-14T19:20:15.359650+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG979j0369GX4Qp1Gv13gB5 ENCSR004PLU https://www.encodeproject.org/experiments/ENCSR004PLU "recombinant protein,transcription factor" eGFP-ZBTB10-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF850CXR https://www.encodeproject.org/files/ENCFF850CXR/@@download/ENCFF850CXR.bam ENCFF130YVR https://www.encodeproject.org/files/ENCFF130YVR/@@download/ENCFF130YVR.bam 65.3 M 0 62.7 M 0.961 PE 101 101 native 26.9 M 0.0 M 26.6 M 0.816 0.99 0.99 102.22 220 1.07 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d018cd6-ae22-44a2-b6dc-2ea7cecbaae3/@@download/cross_correlation_plot/ENCFF456XDQENCFF104PEG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB231NSS michael-snyder:HEK_eGFP-ZBTB10_FRT_ChIP_L1 "ENCFF104PEG,ENCFF456XDQ" HiSeq 2000 2016-12-15T04:02:32.065237+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qB5j03691VQjVJByZkKX1 ENCSR004PLU https://www.encodeproject.org/experiments/ENCSR004PLU "recombinant protein,transcription factor" eGFP-ZBTB10-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF263DIR https://www.encodeproject.org/files/ENCFF263DIR/@@download/ENCFF263DIR.bam ENCFF303RHA https://www.encodeproject.org/files/ENCFF303RHA/@@download/ENCFF303RHA.bam 64.1 M 0 62.0 M 0.967 PE 101 101 native 26.6 M 0.0 M 26.4 M 0.823 0.99 0.99 136.84 220 1.08 2.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/12512400-b2a1-4eef-962d-9aeaf9442ad2/@@download/cross_correlation_plot/ENCFF454CBQENCFF262SIO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB227MHI michael-snyder:HEK_eGFP-ZBTB10_FRT_ChIP_L2 "ENCFF454CBQ,ENCFF262SIO" HiSeq 2000 2016-12-15T03:48:11.990557+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qG300369F00q32BFF79Zx ENCSR882ZTS https://www.encodeproject.org/experiments/ENCSR882ZTS "recombinant protein,transcription factor" eGFP-ZBTB11-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF023LTK https://www.encodeproject.org/files/ENCFF023LTK/@@download/ENCFF023LTK.bam ENCFF339GPN https://www.encodeproject.org/files/ENCFF339GPN/@@download/ENCFF339GPN.bam 53.0 M 0 47.6 M 0.898 PE 101 101 native 20.7 M 0.0 M 19.5 M 0.736 0.94 0.94 17.88 205 1.45 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/5db80f99-cb31-42b1-a79e-ccc3b8ed22aa/@@download/cross_correlation_plot/ENCFF768RZWENCFF779JEY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB592DTG michael-snyder:HEK_eGFP-ZBTB11_FRT_ChIP_L1 "ENCFF779JEY,ENCFF768RZW" HiSeq 2000 2016-09-14T19:18:19.967070+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG96VQ036994Jx4PVBXK9zj ENCSR882ZTS https://www.encodeproject.org/experiments/ENCSR882ZTS "recombinant protein,transcription factor" eGFP-ZBTB11-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF649JMD https://www.encodeproject.org/files/ENCFF649JMD/@@download/ENCFF649JMD.bam ENCFF918YFV https://www.encodeproject.org/files/ENCFF918YFV/@@download/ENCFF918YFV.bam 62.1 M 0 59.5 M 0.958 PE 101 101 native 26.1 M 0.0 M 25.5 M 0.821 0.98 0.98 46.00 215 1.51 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/f094a56d-0799-46e8-b651-6952e93f4949/@@download/cross_correlation_plot/ENCFF952XTBENCFF354KYI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB390DUN michael-snyder:HEK_eGFP-ZBTB11_FRT_ChIP_L2 "ENCFF952XTB,ENCFF354KYI" HiSeq 2000 2016-09-14T19:19:10.749719+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG96f80369BvpJbQkBjP9g0 ENCSR631WAA https://www.encodeproject.org/experiments/ENCSR631WAA "recombinant protein,transcription factor" eGFP-ZBTB17-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF057NJA https://www.encodeproject.org/files/ENCFF057NJA/@@download/ENCFF057NJA.bam ENCFF190XJZ https://www.encodeproject.org/files/ENCFF190XJZ/@@download/ENCFF190XJZ.bam 54.9 M 0 53.9 M 0.983 PE 101 101 native 24.0 M 0.0 M 23.6 M 0.860 0.98 0.98 62.12 255 1.22 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8441f2a-7fb8-4093-810e-8471f18b500c/@@download/cross_correlation_plot/ENCFF862OIPENCFF587GLI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB501RTX michael-snyder:HEK_eGFP-ZBTB17_FRT_ChIP_L1 "ENCFF862OIP,ENCFF587GLI" HiSeq 2000 2016-09-14T19:13:02.229979+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGB108036997y2b0k8qBJq8 ENCSR631WAA https://www.encodeproject.org/experiments/ENCSR631WAA "recombinant protein,transcription factor" eGFP-ZBTB17-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF078YAS https://www.encodeproject.org/files/ENCFF078YAS/@@download/ENCFF078YAS.bam ENCFF909ITL https://www.encodeproject.org/files/ENCFF909ITL/@@download/ENCFF909ITL.bam 79.8 M 0 78.5 M 0.983 PE 101 101 native 35.0 M 0.0 M 34.2 M 0.857 0.98 0.98 46.10 230 1.22 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/0790e959-d46f-4415-9690-66f2ec42ccef/@@download/cross_correlation_plot/ENCFF120XAXENCFF499WBO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB783OTL michael-snyder:HEK_eGFP-ZBTB17_FRT_ChIP_L2 "ENCFF120XAX,ENCFF499WBO" HiSeq 2000 2016-09-14T19:18:13.870815+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGB14Q0369F1Xf4jx84ZFjJ ENCSR460MBI https://www.encodeproject.org/experiments/ENCSR460MBI "transcription factor,recombinant protein" eGFP-ZBTB20-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF816BLB https://www.encodeproject.org/files/ENCFF816BLB/@@download/ENCFF816BLB.bam ENCFF275VAV https://www.encodeproject.org/files/ENCFF275VAV/@@download/ENCFF275VAV.bam 77.8 M 0 75.6 M 0.972 PE 101 101 native 32.9 M 0.0 M 32.7 M 0.840 0.99 0.99 173.55 230 1.27 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/e769b9d6-7784-4fdc-8f31-3b26919fe06a/@@download/cross_correlation_plot/ENCFF033ZFDENCFF753KIN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB671AKQ michael-snyder:HEK_eGFP-ZBTB20_FRT_ChIP_L1 "ENCFF033ZFD,ENCFF753KIN" HiSeq 2000 2016-12-15T06:14:05.559887+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qB9003696vv3xJBbkJ98q ENCSR460MBI https://www.encodeproject.org/experiments/ENCSR460MBI "transcription factor,recombinant protein" eGFP-ZBTB20-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF025LBM https://www.encodeproject.org/files/ENCFF025LBM/@@download/ENCFF025LBM.bam ENCFF879PRT https://www.encodeproject.org/files/ENCFF879PRT/@@download/ENCFF879PRT.bam 53.9 M 0 52.7 M 0.978 PE 101 101 native 23.0 M 0.0 M 22.8 M 0.847 0.99 0.99 140.35 230 1.15 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/bbb3aecf-0d3c-4b0b-9996-76b4159f03a5/@@download/cross_correlation_plot/ENCFF204KOOENCFF668LKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB171GGN michael-snyder:HEK_eGFP-ZBTB20_FRT_ChIP_L2 "ENCFF204KOO,ENCFF668LKZ" HiSeq 2000 2016-12-15T03:12:38.926557+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFX80369F1Xbp2BQqJxqz ENCSR321MSF https://www.encodeproject.org/experiments/ENCSR321MSF "recombinant protein,transcription factor" eGFP-ZBTB21-human HEK293 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF191BKS https://www.encodeproject.org/files/ENCFF191BKS/@@download/ENCFF191BKS.bam ENCFF307PBV https://www.encodeproject.org/files/ENCFF307PBV/@@download/ENCFF307PBV.bam 66.6 M 0 64.7 M 0.972 PE 101 101 native 28.5 M 0.0 M 27.9 M 0.838 0.98 0.98 51.43 215 1.12 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8a8135b-395f-4af1-8c83-bc29f0871d6f/@@download/cross_correlation_plot/ENCFF280GIQENCFF384HTL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB927FIF michael-snyder:HEK_eGFP-ZBTB21_FRT_ChIP_L4 "ENCFF280GIQ,ENCFF384HTL" HiSeq 2000 2017-02-08T04:38:29.162971+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J3x480369KPBZ4PKB5G83F ENCSR321MSF https://www.encodeproject.org/experiments/ENCSR321MSF "recombinant protein,transcription factor" eGFP-ZBTB21-human HEK293 immortalized cell line 5 michael-snyder ENCODE3 GRCh38 ENCFF339YFE https://www.encodeproject.org/files/ENCFF339YFE/@@download/ENCFF339YFE.bam ENCFF783YWQ https://www.encodeproject.org/files/ENCFF783YWQ/@@download/ENCFF783YWQ.bam 63.4 M 0 61.6 M 0.971 PE 101 101 native 27.0 M 0.0 M 26.6 M 0.839 0.99 0.99 70.77 210 1.11 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/a20f9e0e-29e1-4baf-9ec8-d12dc9ffc1ce/@@download/cross_correlation_plot/ENCFF950RDXENCFF864RUH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB823ALQ michael-snyder:HEK_eGFP-ZBTB21_FRT_ChIP_L5 "ENCFF950RDX,ENCFF864RUH" HiSeq 2000 2017-02-08T04:38:21.090706+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J3xJj0369JK30QByqZv5kf ENCSR229DYF https://www.encodeproject.org/experiments/ENCSR229DYF "recombinant protein,transcription factor" eGFP-ZBTB26-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF066ZSK https://www.encodeproject.org/files/ENCFF066ZSK/@@download/ENCFF066ZSK.bam ENCFF410UHW https://www.encodeproject.org/files/ENCFF410UHW/@@download/ENCFF410UHW.bam 177.9 M 0 167.4 M 0.941 PE 101 101 native 73.7 M 0.0 M 63.8 M 0.717 0.87 0.86 7.33 240 1.47 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/247052f7-727d-4b5f-bb79-6af53d43ba42/@@download/cross_correlation_plot/ENCFF095AFXENCFF173GSZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB136FFY michael-snyder:HEK_eGFP-ZBTB26_FRT_ChIP_L1 "ENCFF173GSZ,ENCFF095AFX" HiSeq 4000 2016-12-09T09:23:15.279041+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F14qQVQ0369K8k6p8qBf9Jpf ENCSR229DYF https://www.encodeproject.org/experiments/ENCSR229DYF "recombinant protein,transcription factor" eGFP-ZBTB26-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF241VRG https://www.encodeproject.org/files/ENCFF241VRG/@@download/ENCFF241VRG.bam ENCFF145MJZ https://www.encodeproject.org/files/ENCFF145MJZ/@@download/ENCFF145MJZ.bam 112.5 M 0 109.5 M 0.973 PE 101 101 native 48.3 M 0.0 M 46.1 M 0.819 0.95 0.95 21.87 250 1.53 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/67943c14-df3c-4625-9281-eb0eb6073026/@@download/cross_correlation_plot/ENCFF219XKYENCFF434TPG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB815JRZ michael-snyder:HEK_eGFP-ZBTB26_FRT_ChIP_L2 "ENCFF219XKY,ENCFF434TPG" HiSeq 4000 2016-09-14T19:22:16.193102+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9xBQ03698Xg7B7xb4pfJ6 ENCSR781EQJ https://www.encodeproject.org/experiments/ENCSR781EQJ "recombinant protein,transcription factor" eGFP-ZBTB48-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF112UNI https://www.encodeproject.org/files/ENCFF112UNI/@@download/ENCFF112UNI.bam ENCFF390ACA https://www.encodeproject.org/files/ENCFF390ACA/@@download/ENCFF390ACA.bam 66.4 M 0 64.6 M 0.974 PE 101 101 native 28.4 M 0.0 M 28.3 M 0.852 0.99 0.99 198.53 225 1.10 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/da174df2-e658-4a46-86bf-57c51e5700c8/@@download/cross_correlation_plot/ENCFF620OZQENCFF889HHE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB422XEO michael-snyder:HEK_eGFP-ZBTB48_FRT_ChIP_L1 "ENCFF620OZQ,ENCFF889HHE" HiSeq 2000 2016-12-15T04:02:50.798839+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qB380369F00q32BFF79Vg ENCSR781EQJ https://www.encodeproject.org/experiments/ENCSR781EQJ "recombinant protein,transcription factor" eGFP-ZBTB48-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF532XHX https://www.encodeproject.org/files/ENCFF532XHX/@@download/ENCFF532XHX.bam ENCFF583MUL https://www.encodeproject.org/files/ENCFF583MUL/@@download/ENCFF583MUL.bam 53.5 M 0 51.9 M 0.970 PE 101 101 native 22.7 M 0.0 M 22.6 M 0.845 1.00 1.00 328.98 210 1.09 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/70181be3-77ea-4e0c-b32d-b57663d27afa/@@download/cross_correlation_plot/ENCFF365YXGENCFF392CXN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB053CLF michael-snyder:HEK_eGFP-ZBTB48_FRT_ChIP_L2 "ENCFF365YXG,ENCFF392CXN" HiSeq 2000 2016-12-15T03:01:25.212137+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFJj03694jP708pv8X4pg ENCSR924GRG https://www.encodeproject.org/experiments/ENCSR924GRG "transcription factor,recombinant protein" eGFP-ZBTB49-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF326GSV https://www.encodeproject.org/files/ENCFF326GSV/@@download/ENCFF326GSV.bam ENCFF400DIH https://www.encodeproject.org/files/ENCFF400DIH/@@download/ENCFF400DIH.bam 57.6 M 0 56.0 M 0.972 PE 101 101 native 24.7 M 0.0 M 24.1 M 0.835 0.97 0.97 39.52 205 1.06 3.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a9e11b4-899a-4e80-94a4-18a752709d1d/@@download/cross_correlation_plot/ENCFF505FEGENCFF295MZS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB184HSW michael-snyder:HEK_eGFP-ZBTB49_FRT_ChIP_L1 "ENCFF295MZS,ENCFF505FEG" HiSeq 2000 2016-09-14T19:25:04.723517+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8kkQ0369BvpJbQkBjP9V0 ENCSR924GRG https://www.encodeproject.org/experiments/ENCSR924GRG "transcription factor,recombinant protein" eGFP-ZBTB49-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF802UVT https://www.encodeproject.org/files/ENCFF802UVT/@@download/ENCFF802UVT.bam ENCFF634UXF https://www.encodeproject.org/files/ENCFF634UXF/@@download/ENCFF634UXF.bam 40.0 M 0 39.0 M 0.976 PE 101 101 native 17.3 M 0.0 M 17.1 M 0.855 0.99 0.99 98.87 200 1.08 4.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/c59d6e12-9a88-4574-afdc-fa2b23ba892c/@@download/cross_correlation_plot/ENCFF951RZSENCFF520VNB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB400KJK michael-snyder:HEK_eGFP-ZBTB49_FRT_ChIP_L2 "ENCFF520VNB,ENCFF951RZS" HiSeq 2000 2016-09-14T19:23:41.089651+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8kxQ0369Kkk1Yvk89K0qB ENCSR773REP https://www.encodeproject.org/experiments/ENCSR773REP "recombinant protein,transcription factor" eGFP-ZBTB7A-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF007CPG https://www.encodeproject.org/files/ENCFF007CPG/@@download/ENCFF007CPG.bam ENCFF236UVU https://www.encodeproject.org/files/ENCFF236UVU/@@download/ENCFF236UVU.bam 80.2 M 0 77.3 M 0.964 PE 101 101 native 33.2 M 0.0 M 32.9 M 0.821 0.99 0.99 114.43 195 1.06 2.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/1fb7ede2-d690-4e92-aee1-cce0428ab442/@@download/cross_correlation_plot/ENCFF231CROENCFF082EXH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB382ZJT michael-snyder:HEK_eGFP-ZBTB7A_FRT_ChIP_L1 "ENCFF082EXH,ENCFF231CRO" HiSeq 2000 2016-09-14T19:27:22.217280+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG90qQ0369BvpJbQkBjP9b4 ENCSR773REP https://www.encodeproject.org/experiments/ENCSR773REP "recombinant protein,transcription factor" eGFP-ZBTB7A-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF026WUS https://www.encodeproject.org/files/ENCFF026WUS/@@download/ENCFF026WUS.bam ENCFF191LXL https://www.encodeproject.org/files/ENCFF191LXL/@@download/ENCFF191LXL.bam 44.8 M 0 43.5 M 0.971 PE 101 101 native 18.9 M 0.0 M 18.8 M 0.839 1.00 1.00 215.98 205 1.09 3.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae207215-3dfa-4cac-ae67-48f17bb0e1d7/@@download/cross_correlation_plot/ENCFF649OMLENCFF152HSQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB665BDQ michael-snyder:HEK_eGFP-ZBTB7A_FRT_ChIP_L2 "ENCFF649OML,ENCFF152HSQ" HiSeq 2000 2016-09-14T19:19:59.413264+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG90zj036994Jx4PVBXK9x3 ENCSR481FEC https://www.encodeproject.org/experiments/ENCSR481FEC "recombinant protein,transcription factor" eGFP-ZBTB8A-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF861CWB https://www.encodeproject.org/files/ENCFF861CWB/@@download/ENCFF861CWB.bam ENCFF869WZQ https://www.encodeproject.org/files/ENCFF869WZQ/@@download/ENCFF869WZQ.bam 51.4 M 0 48.7 M 0.947 PE 101 101 native 21.4 M 0.0 M 20.7 M 0.804 0.97 0.97 29.36 230 1.32 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/1321b1a4-481e-41f1-a39f-490e5facf351/@@download/cross_correlation_plot/ENCFF906LEJENCFF872RVH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB755IEY michael-snyder:HEK_eGFP-ZBTB8A_FRT_ChIP_L1 "ENCFF872RVH,ENCFF906LEJ" HiSeq 2000 2016-09-14T19:24:00.988347+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8bX80369JP9931xpgP8py ENCSR481FEC https://www.encodeproject.org/experiments/ENCSR481FEC "recombinant protein,transcription factor" eGFP-ZBTB8A-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF276PEK https://www.encodeproject.org/files/ENCFF276PEK/@@download/ENCFF276PEK.bam ENCFF314JRO https://www.encodeproject.org/files/ENCFF314JRO/@@download/ENCFF314JRO.bam 61.3 M 0 57.1 M 0.932 PE 101 101 native 25.1 M 0.0 M 24.1 M 0.787 0.96 0.96 26.04 220 1.31 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f579f61-5b2a-4c1b-99ba-67f171707b75/@@download/cross_correlation_plot/ENCFF592FUTENCFF018COO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB143MYU michael-snyder:HEK_eGFP-ZBTB8A_FRT_ChIP_L2 "ENCFF018COO,ENCFF592FUT" HiSeq 2000 2016-09-14T19:22:03.249961+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8bj0036973J1BzVpJ4j4F ENCSR909HMT https://www.encodeproject.org/experiments/ENCSR909HMT "recombinant protein,transcription factor" eGFP-ZEB1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF428TXD https://www.encodeproject.org/files/ENCFF428TXD/@@download/ENCFF428TXD.bam ENCFF772VMV https://www.encodeproject.org/files/ENCFF772VMV/@@download/ENCFF772VMV.bam 59.3 M 0 56.1 M 0.945 PE 101 101 native 24.6 M 0.0 M 24.2 M 0.816 0.98 0.98 60.50 225 1.08 2.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/0263f5c5-2607-43f1-8a14-c633e02e49d1/@@download/cross_correlation_plot/ENCFF841LNZENCFF349SST.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB587KXK michael-snyder:HEK_eGFP-ZEB1_FRT_ChIP_L1 "ENCFF841LNZ,ENCFF349SST" HiSeq 2000 2016-09-14T19:22:19.282507+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8y800369BvpJbQkBjP9YP ENCSR909HMT https://www.encodeproject.org/experiments/ENCSR909HMT "recombinant protein,transcription factor" eGFP-ZEB1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF262PFD https://www.encodeproject.org/files/ENCFF262PFD/@@download/ENCFF262PFD.bam ENCFF758YBD https://www.encodeproject.org/files/ENCFF758YBD/@@download/ENCFF758YBD.bam 67.7 M 0 65.6 M 0.969 PE 101 101 native 28.9 M 0.0 M 28.5 M 0.841 0.99 0.99 74.48 205 1.08 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc3a8860-f6d4-4ad0-a168-aa41e16213c2/@@download/cross_correlation_plot/ENCFF204USMENCFF647EYX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB134VRF michael-snyder:HEK_eGFP-ZEB1_FRT_ChIP_L2 "ENCFF204USM,ENCFF647EYX" HiSeq 2000 2016-09-14T19:25:07.456903+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8yK00369JPg0Xjj75v3z8 ENCSR417VWF https://www.encodeproject.org/experiments/ENCSR417VWF "recombinant protein,transcription factor" eGFP-ZEB2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF235WLU https://www.encodeproject.org/files/ENCFF235WLU/@@download/ENCFF235WLU.bam ENCFF116PTI https://www.encodeproject.org/files/ENCFF116PTI/@@download/ENCFF116PTI.bam 55.4 M 0 52.7 M 0.951 PE 101 101 native 23.4 M 0.0 M 22.4 M 0.811 0.96 0.96 24.61 220 1.14 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/81b55248-ff4f-43ea-ac1c-a297ad46627e/@@download/cross_correlation_plot/ENCFF815ZVGENCFF811KIP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB759APX michael-snyder:HEK_eGFP-ZEB2_FRT_ChIP_L1 "ENCFF811KIP,ENCFF815ZVG" HiSeq 2000 2016-09-14T19:20:40.867690+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG93VQ03690q324KVG1qPz3 ENCSR417VWF https://www.encodeproject.org/experiments/ENCSR417VWF "recombinant protein,transcription factor" eGFP-ZEB2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF464LNE https://www.encodeproject.org/files/ENCFF464LNE/@@download/ENCFF464LNE.bam ENCFF230OUZ https://www.encodeproject.org/files/ENCFF230OUZ/@@download/ENCFF230OUZ.bam 53.9 M 0 50.7 M 0.941 PE 101 101 native 22.5 M 0.0 M 21.6 M 0.801 0.96 0.96 25.89 220 1.15 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a3424f8-4421-45f9-824e-58680d597fea/@@download/cross_correlation_plot/ENCFF481UQCENCFF419KZP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB432PLO michael-snyder:HEK_eGFP-ZEB2_FRT_ChIP_L2 "ENCFF419KZP,ENCFF481UQC" HiSeq 2000 2016-09-14T19:19:14.808447+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG93bQ0369PBbP1x1p94z67 ENCSR632SIM https://www.encodeproject.org/experiments/ENCSR632SIM "transcription factor,recombinant protein" eGFP-ZFHX2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF602FGJ https://www.encodeproject.org/files/ENCFF602FGJ/@@download/ENCFF602FGJ.bam ENCFF109BRV https://www.encodeproject.org/files/ENCFF109BRV/@@download/ENCFF109BRV.bam 72.5 M 0 69.8 M 0.963 PE 101 101 native 30.6 M 0.0 M 30.3 M 0.837 0.99 0.99 147.56 205 1.58 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1ae356e-0094-47dd-9429-891abd7aae82/@@download/cross_correlation_plot/ENCFF962YIKENCFF692XUJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB298NZO michael-snyder:HEK_eGFP-ZFHX2_FRT_ChIP_L1 "ENCFF692XUJ,ENCFF962YIK" HiSeq 2000 2016-12-15T06:13:09.835130+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18q9v803695fJKb0K3Z5kGk ENCSR632SIM https://www.encodeproject.org/experiments/ENCSR632SIM "transcription factor,recombinant protein" eGFP-ZFHX2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF871CIH https://www.encodeproject.org/files/ENCFF871CIH/@@download/ENCFF871CIH.bam ENCFF018KGA https://www.encodeproject.org/files/ENCFF018KGA/@@download/ENCFF018KGA.bam 75.8 M 0 74.0 M 0.976 PE 101 101 native 32.5 M 0.0 M 32.1 M 0.847 0.99 0.99 90.13 210 1.38 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/5353a9b7-48ee-4065-88a8-446be97e30f6/@@download/cross_correlation_plot/ENCFF574OQOENCFF352EJH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB021PPC michael-snyder:HEK_eGFP-ZFHX2_FRT_ChIP_L2 "ENCFF352EJH,ENCFF574OQO" HiSeq 2000 2016-12-15T06:14:52.918172+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFzj03691VQjVJByZkKbj ENCSR134QIE https://www.encodeproject.org/experiments/ENCSR134QIE "recombinant protein,transcription factor" eGFP-ZFP3-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF646WFM https://www.encodeproject.org/files/ENCFF646WFM/@@download/ENCFF646WFM.bam ENCFF367DCI https://www.encodeproject.org/files/ENCFF367DCI/@@download/ENCFF367DCI.bam 24.4 M 0 23.9 M 0.979 PE 101 101 native 10.6 M 0.0 M 10.5 M 0.863 0.99 0.99 149.97 220 1.13 4.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f384ae2-5e3d-4579-9252-3867269f9fa3/@@download/cross_correlation_plot/ENCFF117CBNENCFF881GTO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB968JSK michael-snyder:HEK_eGFP-ZFP3_FRT_ChIP_L1 "ENCFF881GTO,ENCFF117CBN" HiSeq 2000 2016-09-14T19:16:10.792920+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9xgj03695gqq4YJBj8kKk ENCSR134QIE https://www.encodeproject.org/experiments/ENCSR134QIE "recombinant protein,transcription factor" eGFP-ZFP3-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF017YQM https://www.encodeproject.org/files/ENCFF017YQM/@@download/ENCFF017YQM.bam ENCFF800JLF https://www.encodeproject.org/files/ENCFF800JLF/@@download/ENCFF800JLF.bam 25.1 M 0 24.6 M 0.979 PE 101 101 native 10.9 M 0.0 M 10.8 M 0.859 0.99 0.99 101.48 200 1.16 4.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/2144c55b-cc0d-4115-b23f-7492f99fdcca/@@download/cross_correlation_plot/ENCFF321KTOENCFF668FXA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB966JSO michael-snyder:HEK_eGFP-ZFP3_FRT_ChIP_L2 "ENCFF668FXA,ENCFF321KTO" HiSeq 2000 2016-09-14T19:15:09.934646+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9xqj0369PzXj14kJK864g ENCSR365GRX https://www.encodeproject.org/experiments/ENCSR365GRX "transcription factor,recombinant protein" eGFP-ZFP37-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF373CMX https://www.encodeproject.org/files/ENCFF373CMX/@@download/ENCFF373CMX.bam ENCFF539PZQ https://www.encodeproject.org/files/ENCFF539PZQ/@@download/ENCFF539PZQ.bam 102.6 M 0 99.9 M 0.973 PE 101 101 native 43.8 M 0.0 M 41.3 M 0.805 0.94 0.94 17.29 225 1.05 2.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a180cdc-65d3-48c5-8504-52ff01b4c781/@@download/cross_correlation_plot/ENCFF755SKNENCFF895EJG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB755UDB michael-snyder:HEK_eGFP-ZFP37_FRT_ChIP_L1 "ENCFF895EJG,ENCFF755SKN" HiSeq 4000 2016-09-13T16:22:45.440985+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgZgQ03691F4z83v3y7Bj9 ENCSR365GRX https://www.encodeproject.org/experiments/ENCSR365GRX "transcription factor,recombinant protein" eGFP-ZFP37-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF504BRR https://www.encodeproject.org/files/ENCFF504BRR/@@download/ENCFF504BRR.bam ENCFF593OVS https://www.encodeproject.org/files/ENCFF593OVS/@@download/ENCFF593OVS.bam 115.9 M 0 112.9 M 0.974 PE 101 101 native 49.6 M 0.0 M 46.1 M 0.795 0.93 0.93 13.94 225 1.04 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/92c95ea8-c358-4faa-9fcf-a4d95caa143d/@@download/cross_correlation_plot/ENCFF512LPAENCFF301ONT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB754PWX michael-snyder:HEK_eGFP-ZFP37_FRT_ChIP_L2 "ENCFF301ONT,ENCFF512LPA" HiSeq 4000 2016-09-13T16:23:41.628433+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgZq003691F4z83v3y7Bjb ENCSR348ONY https://www.encodeproject.org/experiments/ENCSR348ONY "recombinant protein,transcription factor" eGFP-ZFP41-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF163LZX https://www.encodeproject.org/files/ENCFF163LZX/@@download/ENCFF163LZX.bam ENCFF949WCL https://www.encodeproject.org/files/ENCFF949WCL/@@download/ENCFF949WCL.bam 74.2 M 0 72.0 M 0.970 PE 101 101 native 31.7 M 0.0 M 31.6 M 0.851 1.00 1.00 390.06 185 1.05 2.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd6a401d-e7d8-4b16-9835-e750915f98be/@@download/cross_correlation_plot/ENCFF343SQTENCFF203JRY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB071FYL michael-snyder:HEK_eGFP-ZFP41_FRT_ChIP_L1 "ENCFF203JRY,ENCFF343SQT" HiSeq 2000 2016-09-14T19:23:44.079599+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8zy003695gqq4YJBj8k26 ENCSR348ONY https://www.encodeproject.org/experiments/ENCSR348ONY "recombinant protein,transcription factor" eGFP-ZFP41-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF037KRM https://www.encodeproject.org/files/ENCFF037KRM/@@download/ENCFF037KRM.bam ENCFF219LWX https://www.encodeproject.org/files/ENCFF219LWX/@@download/ENCFF219LWX.bam 73.6 M 0 72.1 M 0.979 PE 101 101 native 31.7 M 0.0 M 31.6 M 0.859 1.00 1.00 293.40 190 1.05 3.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/7001eb70-e617-45b0-85f1-bd45195f7ec8/@@download/cross_correlation_plot/ENCFF161OGLENCFF522WIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB968TGA michael-snyder:HEK_eGFP-ZFP41_FRT_ChIP_L2 "ENCFF161OGL,ENCFF522WIQ" HiSeq 2000 2016-09-14T19:24:05.911079+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG902j03695gqq4YJBj8k2X ENCSR592KSP https://www.encodeproject.org/experiments/ENCSR592KSP "recombinant protein,transcription factor" eGFP-ZFP64-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF833MIU https://www.encodeproject.org/files/ENCFF833MIU/@@download/ENCFF833MIU.bam ENCFF645AIO https://www.encodeproject.org/files/ENCFF645AIO/@@download/ENCFF645AIO.bam 63.9 M 0 62.5 M 0.978 PE 101 101 native 27.7 M 0.0 M 26.6 M 0.833 0.96 0.96 26.68 205 1.06 4.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9e4df86-3247-4997-a448-f949930a9cd5/@@download/cross_correlation_plot/ENCFF688XKXENCFF742FEB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB870EUO michael-snyder:HEK_eGFP-ZFP64_FRT_ChIP_L1 "ENCFF742FEB,ENCFF688XKX" HiSeq 2000 2016-09-14T19:39:23.803551+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Zz803695XjQpy58BVJ59 ENCSR592KSP https://www.encodeproject.org/experiments/ENCSR592KSP "recombinant protein,transcription factor" eGFP-ZFP64-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF618YRD https://www.encodeproject.org/files/ENCFF618YRD/@@download/ENCFF618YRD.bam ENCFF694CMK https://www.encodeproject.org/files/ENCFF694CMK/@@download/ENCFF694CMK.bam 54.5 M 0 51.6 M 0.947 PE 101 101 native 22.7 M 0.0 M 21.6 M 0.790 0.95 0.95 19.90 205 1.08 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/f79d5a1a-f259-4d17-baf9-779938722ce5/@@download/cross_correlation_plot/ENCFF653BTHENCFF460GBK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285SKH michael-snyder:HEK_eGFP-ZFP64_FRT_ChIP_L2 "ENCFF460GBK,ENCFF653BTH" HiSeq 2000 2016-09-14T19:39:08.895040+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9b300369Kkk1Yvk89K14F ENCSR381VYR https://www.encodeproject.org/experiments/ENCSR381VYR "transcription factor,recombinant protein" eGFP-ZFP69B-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF162XYQ https://www.encodeproject.org/files/ENCFF162XYQ/@@download/ENCFF162XYQ.bam ENCFF235GWZ https://www.encodeproject.org/files/ENCFF235GWZ/@@download/ENCFF235GWZ.bam 66.9 M 0 65.2 M 0.975 PE 101 101 native 28.8 M 0.0 M 28.5 M 0.852 0.99 0.99 95.28 205 1.10 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/62f6ab09-e67d-43e2-b9c3-e3ec354d2cb3/@@download/cross_correlation_plot/ENCFF322OHRENCFF930PJS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB650ECO michael-snyder:HEK_eGFP-ZFP69B_FRT_ChIP_L1 "ENCFF322OHR,ENCFF930PJS" HiSeq 2000 2016-09-14T19:29:01.858677+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9K4j0369JpJK47VQfv760 ENCSR381VYR https://www.encodeproject.org/experiments/ENCSR381VYR "transcription factor,recombinant protein" eGFP-ZFP69B-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF691TZW https://www.encodeproject.org/files/ENCFF691TZW/@@download/ENCFF691TZW.bam ENCFF492CAQ https://www.encodeproject.org/files/ENCFF492CAQ/@@download/ENCFF492CAQ.bam 51.0 M 0 49.6 M 0.972 PE 101 101 native 21.8 M 0.0 M 21.6 M 0.847 0.99 0.99 112.35 200 1.11 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e8b7ac7-f31a-4c20-9a0c-d51762107e97/@@download/cross_correlation_plot/ENCFF014DZBENCFF363NUU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB821ZCY michael-snyder:HEK_eGFP-ZFP69B_FRT_ChIP_L2 "ENCFF014DZB,ENCFF363NUU" HiSeq 2000 2016-09-14T19:27:39.277642+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9K900369B1pgXbv4QFgQ5 ENCSR728MWW https://www.encodeproject.org/experiments/ENCSR728MWW "recombinant protein,transcription factor" eGFP-ZIC2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF558PHY https://www.encodeproject.org/files/ENCFF558PHY/@@download/ENCFF558PHY.bam ENCFF892OHI https://www.encodeproject.org/files/ENCFF892OHI/@@download/ENCFF892OHI.bam 63.6 M 0 62.4 M 0.981 PE 101 101 native 27.5 M 0.0 M 27.3 M 0.860 0.99 0.99 140.56 220 1.27 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f47abbe-f97e-442e-9ca0-402400d039f2/@@download/cross_correlation_plot/ENCFF539JMOENCFF981GJX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB121GOT michael-snyder:HEK_eGFP-ZIC2_FRT_ChIP_L1 "ENCFF539JMO,ENCFF981GJX" HiSeq 2000 2016-12-15T04:03:04.220824+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qB200369FGk256Vf7Y8pj ENCSR728MWW https://www.encodeproject.org/experiments/ENCSR728MWW "recombinant protein,transcription factor" eGFP-ZIC2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF645WYX https://www.encodeproject.org/files/ENCFF645WYX/@@download/ENCFF645WYX.bam ENCFF678RQY https://www.encodeproject.org/files/ENCFF678RQY/@@download/ENCFF678RQY.bam 62.5 M 0 61.3 M 0.980 PE 101 101 native 27.1 M 0.0 M 26.9 M 0.860 0.99 0.99 125.98 210 1.35 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f0592aa-269c-4427-8037-e349436050f8/@@download/cross_correlation_plot/ENCFF549IKBENCFF659PCT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB638TRX michael-snyder:HEK_eGFP-ZIC2_FRT_ChIP_L2 "ENCFF549IKB,ENCFF659PCT" HiSeq 2000 2016-12-15T03:48:51.898463+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qG7j036974yqx29x5Z61K ENCSR074VAI https://www.encodeproject.org/experiments/ENCSR074VAI "transcription factor,recombinant protein" eGFP-ZIK1-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF215EXX https://www.encodeproject.org/files/ENCFF215EXX/@@download/ENCFF215EXX.bam ENCFF328JMC https://www.encodeproject.org/files/ENCFF328JMC/@@download/ENCFF328JMC.bam 86.8 M 0 84.1 M 0.970 PE 101 101 native 36.0 M 0.0 M 33.9 M 0.782 0.94 0.94 16.78 210 1.05 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/4baf4451-1b88-4a37-86d7-3afc93588216/@@download/cross_correlation_plot/ENCFF786REQENCFF575PJE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB057WEO michael-snyder:HEK_eGFP-ZIK1_FRT_ChIP_L1 "ENCFF575PJE,ENCFF786REQ" HiSeq 4000 2017-02-14T17:36:46.104854+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0qB00369B35pQ3K5v3B1b ENCSR074VAI https://www.encodeproject.org/experiments/ENCSR074VAI "transcription factor,recombinant protein" eGFP-ZIK1-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF107MGS https://www.encodeproject.org/files/ENCFF107MGS/@@download/ENCFF107MGS.bam ENCFF249IDP https://www.encodeproject.org/files/ENCFF249IDP/@@download/ENCFF249IDP.bam 77.2 M 0 74.6 M 0.966 PE 101 101 native 31.5 M 0.0 M 29.8 M 0.773 0.95 0.95 18.81 200 1.05 4.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/11e8fde1-d6f8-4bcb-8adb-e42b4575d64c/@@download/cross_correlation_plot/ENCFF696VRUENCFF919JNL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB224ZAT michael-snyder:HEK_eGFP-ZIK1_FRT_ChIP_L2 "ENCFF696VRU,ENCFF919JNL" HiSeq 4000 2017-02-14T17:36:09.366634+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0qjQ03699BJ8f3PbkV0x5 ENCSR019WUS https://www.encodeproject.org/experiments/ENCSR019WUS "recombinant protein,transcription factor" eGFP-ZNF10-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF242MGC https://www.encodeproject.org/files/ENCFF242MGC/@@download/ENCFF242MGC.bam ENCFF921SQY https://www.encodeproject.org/files/ENCFF921SQY/@@download/ENCFF921SQY.bam 56.3 M 0 54.0 M 0.959 PE 101 101 native 23.2 M 0.0 M 23.0 M 0.817 0.99 0.99 107.35 215 1.09 2.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/f340f762-33f7-4f21-9dca-82072c204b73/@@download/cross_correlation_plot/ENCFF192LSUENCFF261LTR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB591UUE michael-snyder:HEK_eGFP-ZNF10_FRT_ChIP_L1 "ENCFF192LSU,ENCFF261LTR" HiSeq 2000 2017-03-04T18:21:12.206995+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv73Q036920Fb581yVKg87 ENCSR019WUS https://www.encodeproject.org/experiments/ENCSR019WUS "recombinant protein,transcription factor" eGFP-ZNF10-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF599QHU https://www.encodeproject.org/files/ENCFF599QHU/@@download/ENCFF599QHU.bam ENCFF352GCO https://www.encodeproject.org/files/ENCFF352GCO/@@download/ENCFF352GCO.bam 84.4 M 0 82.3 M 0.975 PE 101 101 native 35.1 M 0.0 M 33.5 M 0.795 0.96 0.96 23.02 160 1.07 3.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f9d5cf5-362a-4fd7-9d26-920b3ff605ba/@@download/cross_correlation_plot/ENCFF233DTHENCFF650VLS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB042NQJ michael-snyder:HEK_eGFP-ZNF10_FRT_ChIP_L2 "ENCFF233DTH,ENCFF650VLS" HiSeq 2000 2017-03-04T18:25:12.981955+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv7BQ03690BfbX8251GGfk ENCSR462FWS https://www.encodeproject.org/experiments/ENCSR462FWS "recombinant protein,transcription factor" eGFP-ZNF101-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF821UAT https://www.encodeproject.org/files/ENCFF821UAT/@@download/ENCFF821UAT.bam ENCFF649PPN https://www.encodeproject.org/files/ENCFF649PPN/@@download/ENCFF649PPN.bam 52.2 M 0 50.7 M 0.973 PE 101 101 native 22.6 M 0.0 M 16.4 M 0.630 0.73 0.73 3.67 230 1.08 4.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/92643ae1-9150-41fc-967a-b52d06205999/@@download/cross_correlation_plot/ENCFF231MZYENCFF474UCX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB896HDJ michael-snyder:HEK_eGFP-ZNF101_FRT_ChIP_L1 "ENCFF474UCX,ENCFF231MZY" HiSeq 2000 2016-09-14T19:20:58.576999+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9218036973J1BzVpJ4j8B ENCSR462FWS https://www.encodeproject.org/experiments/ENCSR462FWS "recombinant protein,transcription factor" eGFP-ZNF101-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF142BBF https://www.encodeproject.org/files/ENCFF142BBF/@@download/ENCFF142BBF.bam ENCFF346GLT https://www.encodeproject.org/files/ENCFF346GLT/@@download/ENCFF346GLT.bam 49.9 M 0 49.0 M 0.981 PE 101 101 native 21.8 M 0.0 M 19.7 M 0.789 0.90 0.90 10.00 230 1.08 3.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/af542676-1246-4210-afcf-8e3902355531/@@download/cross_correlation_plot/ENCFF466VMFENCFF451TRG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB914FJJ michael-snyder:HEK_eGFP-ZNF101_FRT_ChIP_L2 "ENCFF466VMF,ENCFF451TRG" HiSeq 2000 2016-09-14T19:20:18.677727+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG926j03692xk39gZV1440G ENCSR751PNN https://www.encodeproject.org/experiments/ENCSR751PNN "recombinant protein,transcription factor" eGFP-ZNF112-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF851NRN https://www.encodeproject.org/files/ENCFF851NRN/@@download/ENCFF851NRN.bam ENCFF269FZF https://www.encodeproject.org/files/ENCFF269FZF/@@download/ENCFF269FZF.bam 86.3 M 0 83.7 M 0.971 PE 101 101 native 35.6 M 0.0 M 33.8 M 0.784 0.95 0.95 19.40 210 1.05 3.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/98886ca2-3807-4793-8d79-b75568872609/@@download/cross_correlation_plot/ENCFF990KCYENCFF059KSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB095YAC michael-snyder:HEK_eGFP-ZNF112_FRT_ChIP_L1 "ENCFF059KSX,ENCFF990KCY" HiSeq 4000 2017-03-04T18:19:16.471891+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv5Zj03694kvVF3fkyPjkF ENCSR751PNN https://www.encodeproject.org/experiments/ENCSR751PNN "recombinant protein,transcription factor" eGFP-ZNF112-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF666UIT https://www.encodeproject.org/files/ENCFF666UIT/@@download/ENCFF666UIT.bam ENCFF686YAE https://www.encodeproject.org/files/ENCFF686YAE/@@download/ENCFF686YAE.bam 83.8 M 0 81.4 M 0.971 PE 101 101 native 34.5 M 0.0 M 32.5 M 0.775 0.94 0.94 16.61 205 1.05 3.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/6cc0e447-210d-4d69-9b01-7f85f5a5b728/@@download/cross_correlation_plot/ENCFF052UFCENCFF278QRX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB140IWJ michael-snyder:HEK_eGFP-ZNF112_FRT_ChIP_L2 "ENCFF278QRX,ENCFF052UFC" HiSeq 4000 2017-03-04T18:18:35.471855+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv60j03690BfbX8251GGfJ ENCSR985MYI https://www.encodeproject.org/experiments/ENCSR985MYI "recombinant protein,transcription factor" eGFP-ZNF114-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF834KLZ https://www.encodeproject.org/files/ENCFF834KLZ/@@download/ENCFF834KLZ.bam ENCFF812GBZ https://www.encodeproject.org/files/ENCFF812GBZ/@@download/ENCFF812GBZ.bam 89.8 M 0 87.1 M 0.969 PE 101 101 native 36.4 M 0.0 M 34.5 M 0.767 0.95 0.95 18.23 205 1.05 3.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/a042777a-ff34-4141-b759-2b7387ef5c07/@@download/cross_correlation_plot/ENCFF519ZJIENCFF748THJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB090DHG michael-snyder:HEK_eGFP-ZNF114_FRT_ChIP_L2 "ENCFF748THJ,ENCFF519ZJI" HiSeq 4000 2017-05-05T11:16:28.293191+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvJQ03698KGf370q972jJ ENCSR985MYI https://www.encodeproject.org/experiments/ENCSR985MYI "recombinant protein,transcription factor" eGFP-ZNF114-human HEK293 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF144HGJ https://www.encodeproject.org/files/ENCFF144HGJ/@@download/ENCFF144HGJ.bam ENCFF623TSQ https://www.encodeproject.org/files/ENCFF623TSQ/@@download/ENCFF623TSQ.bam 86.1 M 0 83.6 M 0.971 PE 101 101 native 35.4 M 0.0 M 33.0 M 0.766 0.93 0.93 14.39 210 1.05 3.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5cd7b0e-4946-481c-ac03-1953695ac864/@@download/cross_correlation_plot/ENCFF977ONAENCFF457RTQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB258WFN michael-snyder:HEK_eGFP-ZNF114_FRT_ChIP_L1 "ENCFF977ONA,ENCFF457RTQ" HiSeq 4000 2017-05-05T10:58:37.992486+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvV00369KZg6P1gzFxjX9 ENCSR224QDY https://www.encodeproject.org/experiments/ENCSR224QDY "recombinant protein,transcription factor" eGFP-ZNF121-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF131UWG https://www.encodeproject.org/files/ENCFF131UWG/@@download/ENCFF131UWG.bam ENCFF031CIP https://www.encodeproject.org/files/ENCFF031CIP/@@download/ENCFF031CIP.bam 122.0 M 0 118.9 M 0.975 PE 101 101 native 51.8 M 0.0 M 50.0 M 0.820 0.96 0.96 28.15 230 1.04 2.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/50e17534-9c2c-446d-b24b-4e2c20681295/@@download/cross_correlation_plot/ENCFF505LMSENCFF495EOX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB556KVV michael-snyder:HEK_eGFP-ZNF121_FRT_ChIP_L1 "ENCFF495EOX,ENCFF505LMS" HiSeq 4000 2016-09-13T16:24:22.422818+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgb0003691F4z83v3y7Bk1 ENCSR224QDY https://www.encodeproject.org/experiments/ENCSR224QDY "recombinant protein,transcription factor" eGFP-ZNF121-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF076IGY https://www.encodeproject.org/files/ENCFF076IGY/@@download/ENCFF076IGY.bam ENCFF688NZK https://www.encodeproject.org/files/ENCFF688NZK/@@download/ENCFF688NZK.bam 92.6 M 0 89.5 M 0.967 PE 101 101 native 38.9 M 0.0 M 37.3 M 0.806 0.96 0.96 24.30 225 1.05 2.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/12f15b22-7c44-4975-9fd2-2c2031bdc8c1/@@download/cross_correlation_plot/ENCFF986WDCENCFF410UBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB776GKQ michael-snyder:HEK_eGFP-ZNF121_FRT_ChIP_L2 "ENCFF410UBV,ENCFF986WDC" HiSeq 4000 2016-09-13T16:22:17.205985+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgb3j0369B1pgXbv4QFQvF ENCSR138RCE https://www.encodeproject.org/experiments/ENCSR138RCE "recombinant protein,transcription factor" eGFP-ZNF132-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF651AIL https://www.encodeproject.org/files/ENCFF651AIL/@@download/ENCFF651AIL.bam ENCFF598IUZ https://www.encodeproject.org/files/ENCFF598IUZ/@@download/ENCFF598IUZ.bam 71.3 M 0 69.4 M 0.973 PE 101 101 native 29.2 M 0.0 M 28.7 M 0.805 0.98 0.98 53.96 145 1.07 4.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/2164164d-5791-4c31-9f11-3f671273ce57/@@download/cross_correlation_plot/ENCFF405NIJENCFF836KYO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285OYS michael-snyder:HEK_eGFP-ZNF132_FRT_ChIP_L1 "ENCFF836KYO,ENCFF405NIJ" HiSeq 2000 2017-03-21T07:27:01.968543+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3815gQ03694jXv07YJB6X81 ENCSR138RCE https://www.encodeproject.org/experiments/ENCSR138RCE "recombinant protein,transcription factor" eGFP-ZNF132-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF696OXV https://www.encodeproject.org/files/ENCFF696OXV/@@download/ENCFF696OXV.bam ENCFF351ZWF https://www.encodeproject.org/files/ENCFF351ZWF/@@download/ENCFF351ZWF.bam 67.2 M 0 65.7 M 0.977 PE 101 101 native 27.8 M 0.0 M 27.1 M 0.805 0.98 0.98 40.76 155 1.07 8.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/578480cc-a5ea-44a1-bf1d-8d7ef54e4c99/@@download/cross_correlation_plot/ENCFF949JWRENCFF585PXT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB607FQK michael-snyder:HEK_eGFP-ZNF132_FRT_ChIP_L2 "ENCFF949JWR,ENCFF585PXT" HiSeq 2000 2017-03-21T07:26:15.782016+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F38169003695yZVKPb68XQV2 ENCSR283MWQ https://www.encodeproject.org/experiments/ENCSR283MWQ "recombinant protein,transcription factor" eGFP-ZNF133-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF472VIX https://www.encodeproject.org/files/ENCFF472VIX/@@download/ENCFF472VIX.bam ENCFF340DGT https://www.encodeproject.org/files/ENCFF340DGT/@@download/ENCFF340DGT.bam 60.9 M 0 58.5 M 0.961 PE 101 101 native 25.5 M 0.0 M 25.2 M 0.829 0.99 0.99 96.95 215 1.07 3.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a1fbd59-699f-41bd-adba-72d09a3be632/@@download/cross_correlation_plot/ENCFF204JBEENCFF013IOZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB107WQC michael-snyder:HEK_eGFP-ZNF133_FRT_ChIP_L1 "ENCFF204JBE,ENCFF013IOZ" HiSeq 2000 2016-12-15T03:47:17.094721+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBk00369J92qZ2Bf6288z ENCSR283MWQ https://www.encodeproject.org/experiments/ENCSR283MWQ "recombinant protein,transcription factor" eGFP-ZNF133-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF520WLC https://www.encodeproject.org/files/ENCFF520WLC/@@download/ENCFF520WLC.bam ENCFF655HOO https://www.encodeproject.org/files/ENCFF655HOO/@@download/ENCFF655HOO.bam 50.0 M 0 48.2 M 0.964 PE 101 101 native 21.0 M 0.0 M 20.9 M 0.837 1.00 1.00 204.80 200 1.08 2.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d8418e8-311e-4d9e-9b82-1a345a5f953e/@@download/cross_correlation_plot/ENCFF050CTTENCFF641CWU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB644HCK michael-snyder:HEK_eGFP-ZNF133_FRT_ChIP_L2 "ENCFF050CTT,ENCFF641CWU" HiSeq 2000 2016-12-15T02:43:08.081276+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFJ80369JqzzJB727gBFV ENCSR551KAP https://www.encodeproject.org/experiments/ENCSR551KAP "recombinant protein,transcription factor" eGFP-ZNF138-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF990BCT https://www.encodeproject.org/files/ENCFF990BCT/@@download/ENCFF990BCT.bam ENCFF290BZK https://www.encodeproject.org/files/ENCFF290BZK/@@download/ENCFF290BZK.bam 71.2 M 0 67.8 M 0.952 PE 101 101 native 29.8 M 0.0 M 28.6 M 0.804 0.96 0.96 25.09 215 1.06 4.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/5757a018-f0c5-4d3a-be68-2bdb703bab68/@@download/cross_correlation_plot/ENCFF528TQXENCFF110HEA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB283ZKE michael-snyder:HEK_eGFP-ZNF138_FRT_ChIP_L1 "ENCFF528TQX,ENCFF110HEA" HiSeq 2000 2016-09-14T19:21:06.931403+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG981003696gGz8k04XPz5v ENCSR551KAP https://www.encodeproject.org/experiments/ENCSR551KAP "recombinant protein,transcription factor" eGFP-ZNF138-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF454HMH https://www.encodeproject.org/files/ENCFF454HMH/@@download/ENCFF454HMH.bam ENCFF548TCT https://www.encodeproject.org/files/ENCFF548TCT/@@download/ENCFF548TCT.bam 59.6 M 0 56.5 M 0.949 PE 101 101 native 24.9 M 0.0 M 24.2 M 0.814 0.98 0.98 40.65 215 1.06 4.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/dea316d2-9cac-4675-a04e-4ca413031c5c/@@download/cross_correlation_plot/ENCFF858BWHENCFF080EPR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB598ESL michael-snyder:HEK_eGFP-ZNF138_FRT_ChIP_L2 "ENCFF858BWH,ENCFF080EPR" HiSeq 2000 2016-09-14T19:20:11.858355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG98500369Bb1K2qkpBjVQJ ENCSR464KFG https://www.encodeproject.org/experiments/ENCSR464KFG "recombinant protein,transcription factor" eGFP-ZNF140-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF398XYY https://www.encodeproject.org/files/ENCFF398XYY/@@download/ENCFF398XYY.bam ENCFF263RDJ https://www.encodeproject.org/files/ENCFF263RDJ/@@download/ENCFF263RDJ.bam 53.8 M 0 51.9 M 0.964 PE 101 101 native 22.9 M 0.0 M 21.9 M 0.812 0.95 0.95 21.87 200 1.07 3.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/328f69bb-d663-46b9-9d65-c693437a2797/@@download/cross_correlation_plot/ENCFF802KGSENCFF306YKT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB495HCN michael-snyder:HEK_eGFP-ZNF140_FRT_ChIP_L1 "ENCFF306YKT,ENCFF802KGS" HiSeq 2000 2016-09-14T19:19:13.167125+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9BV8036997y2b0k8qBJXB ENCSR464KFG https://www.encodeproject.org/experiments/ENCSR464KFG "recombinant protein,transcription factor" eGFP-ZNF140-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF586JGY https://www.encodeproject.org/files/ENCFF586JGY/@@download/ENCFF586JGY.bam ENCFF477ARG https://www.encodeproject.org/files/ENCFF477ARG/@@download/ENCFF477ARG.bam 65.3 M 0 63.9 M 0.979 PE 101 101 native 28.2 M 0.0 M 27.8 M 0.852 0.99 0.99 67.47 205 1.06 3.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/690d9d9b-aa1c-4dd0-a6da-24eb2d2540a7/@@download/cross_correlation_plot/ENCFF602URBENCFF618GBB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB673UDE michael-snyder:HEK_eGFP-ZNF140_FRT_ChIP_L2 "ENCFF602URB,ENCFF618GBB" HiSeq 2000 2016-09-14T19:21:34.634622+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Bb00369Kkk1Yvk89K115 ENCSR689YFA https://www.encodeproject.org/experiments/ENCSR689YFA "recombinant protein,transcription factor" eGFP-ZNF146-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF223SSU https://www.encodeproject.org/files/ENCFF223SSU/@@download/ENCFF223SSU.bam ENCFF652WXQ https://www.encodeproject.org/files/ENCFF652WXQ/@@download/ENCFF652WXQ.bam 66.7 M 0 61.2 M 0.917 PE 101 101 native 26.4 M 0.0 M 26.2 M 0.787 0.99 0.99 169.14 195 1.09 2.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa8795cc-2020-4fbf-87ea-c2b79a309862/@@download/cross_correlation_plot/ENCFF441XRJENCFF382JJC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB233RVF michael-snyder:HEK_eGFP-ZNF146_FRT_ChIP_L1 "ENCFF441XRJ,ENCFF382JJC" HiSeq 2000 2016-09-14T19:29:30.723047+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9JvQ03695gqq4YJBj8k98 ENCSR689YFA https://www.encodeproject.org/experiments/ENCSR689YFA "recombinant protein,transcription factor" eGFP-ZNF146-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF267HWD https://www.encodeproject.org/files/ENCFF267HWD/@@download/ENCFF267HWD.bam ENCFF830UTZ https://www.encodeproject.org/files/ENCFF830UTZ/@@download/ENCFF830UTZ.bam 64.6 M 0 62.1 M 0.961 PE 101 101 native 27.0 M 0.0 M 26.8 M 0.829 0.99 0.99 167.38 195 1.09 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/409b8679-3092-44fd-b371-b8f2f776d833/@@download/cross_correlation_plot/ENCFF209LANENCFF027IUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB783PYO michael-snyder:HEK_eGFP-ZNF146_FRT_ChIP_L2 "ENCFF027IUI,ENCFF209LAN" HiSeq 2000 2016-09-14T19:29:16.777985+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9K080369BvpJbQkBjP9jP ENCSR736ZKL https://www.encodeproject.org/experiments/ENCSR736ZKL "recombinant protein,transcription factor" eGFP-ZNF148-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF636XWN https://www.encodeproject.org/files/ENCFF636XWN/@@download/ENCFF636XWN.bam ENCFF060UUX https://www.encodeproject.org/files/ENCFF060UUX/@@download/ENCFF060UUX.bam 101.3 M 0 98.3 M 0.970 PE 101 101 native 42.3 M 0.0 M 39.0 M 0.769 0.92 0.92 12.52 210 1.05 3.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/83c54ea5-ab03-4389-b78a-12bfb27a03ee/@@download/cross_correlation_plot/ENCFF061OTPENCFF151NBC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB515IJS michael-snyder:HEK_eGFP-ZNF148_FRT_ChIP_L1 "ENCFF151NBC,ENCFF061OTP" HiSeq 4000 2017-02-16T07:04:51.404336+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X9GZj036947ykV3q51b8gK ENCSR736ZKL https://www.encodeproject.org/experiments/ENCSR736ZKL "recombinant protein,transcription factor" eGFP-ZNF148-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF949CYQ https://www.encodeproject.org/files/ENCFF949CYQ/@@download/ENCFF949CYQ.bam ENCFF270ZZM https://www.encodeproject.org/files/ENCFF270ZZM/@@download/ENCFF270ZZM.bam 78.0 M 0 75.4 M 0.967 PE 101 101 native 32.1 M 0.0 M 29.7 M 0.762 0.92 0.92 12.95 195 1.06 3.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d65e5bb-86af-442e-b468-342a21f14fea/@@download/cross_correlation_plot/ENCFF817CFBENCFF917CWI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB928VFX michael-snyder:HEK_eGFP-ZNF148_FRT_ChIP_L2 "ENCFF817CFB,ENCFF917CWI" HiSeq 4000 2017-02-16T07:02:47.500029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X9Gz00369200KV3Ppk1FyP ENCSR801BWR https://www.encodeproject.org/experiments/ENCSR801BWR "transcription factor,recombinant protein" eGFP-ZNF155-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF940NMC https://www.encodeproject.org/files/ENCFF940NMC/@@download/ENCFF940NMC.bam ENCFF975BNR https://www.encodeproject.org/files/ENCFF975BNR/@@download/ENCFF975BNR.bam 54.1 M 0 53.0 M 0.979 PE 101 101 native 23.3 M 0.0 M 22.9 M 0.847 0.98 0.98 62.27 200 1.07 3.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a9c7c6a-dad0-4e8a-83c9-c5a5bef52548/@@download/cross_correlation_plot/ENCFF816GRPENCFF719VPQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB845ZJJ michael-snyder:HEK_eGFP-ZNF155_FRT_ChIP_L1 "ENCFF816GRP,ENCFF719VPQ" HiSeq 2000 2016-12-15T03:06:48.462985+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qF8Q0369J92qZ2Bf6289b ENCSR801BWR https://www.encodeproject.org/experiments/ENCSR801BWR "transcription factor,recombinant protein" eGFP-ZNF155-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF884FVP https://www.encodeproject.org/files/ENCFF884FVP/@@download/ENCFF884FVP.bam ENCFF703DEF https://www.encodeproject.org/files/ENCFF703DEF/@@download/ENCFF703DEF.bam 62.3 M 0 61.1 M 0.980 PE 101 101 native 26.9 M 0.0 M 26.6 M 0.853 0.99 0.99 76.20 195 1.06 4.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb4371af-b0cb-49e5-b5e5-46cbe4e3af79/@@download/cross_correlation_plot/ENCFF287QCCENCFF273IVY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB476MKF michael-snyder:HEK_eGFP-ZNF155_FRT_ChIP_L2 "ENCFF273IVY,ENCFF287QCC" HiSeq 2000 2016-12-15T04:02:14.991378+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJgj0369FGK86Fk16zxF8 ENCSR564YYW https://www.encodeproject.org/experiments/ENCSR564YYW "transcription factor,recombinant protein" eGFP-ZNF157-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF466HSA https://www.encodeproject.org/files/ENCFF466HSA/@@download/ENCFF466HSA.bam ENCFF759FBC https://www.encodeproject.org/files/ENCFF759FBC/@@download/ENCFF759FBC.bam 72.6 M 0 66.1 M 0.911 PE 101 101 native 28.7 M 0.0 M 28.0 M 0.770 0.97 0.97 40.02 215 1.13 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0d4dfb5-3dde-4b9b-b85f-d20b35873d1e/@@download/cross_correlation_plot/ENCFF794VUUENCFF495GCB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB394XJG michael-snyder:HEK_eGFP-ZNF157_FRT_ChIP_L1 "ENCFF495GCB,ENCFF794VUU" HiSeq 2000 2016-12-15T06:13:28.202486+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBG80369JqzzJB727gBBP ENCSR564YYW https://www.encodeproject.org/experiments/ENCSR564YYW "transcription factor,recombinant protein" eGFP-ZNF157-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF572FNE https://www.encodeproject.org/files/ENCFF572FNE/@@download/ENCFF572FNE.bam ENCFF521KSL https://www.encodeproject.org/files/ENCFF521KSL/@@download/ENCFF521KSL.bam 60.3 M 0 54.8 M 0.909 PE 101 101 native 23.7 M 0.0 M 23.2 M 0.770 0.98 0.98 46.85 220 1.14 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc14d63a-8a87-457c-a985-de7b06d0f44c/@@download/cross_correlation_plot/ENCFF409HCFENCFF435DON.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB468RUG michael-snyder:HEK_eGFP-ZNF157_FRT_ChIP_L2 "ENCFF409HCF,ENCFF435DON" HiSeq 2000 2016-12-15T03:12:38.971721+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qG30036974yqx29x5Z61B ENCSR093HXE https://www.encodeproject.org/experiments/ENCSR093HXE "recombinant protein,transcription factor" eGFP-ZNF16-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF126ZOC https://www.encodeproject.org/files/ENCFF126ZOC/@@download/ENCFF126ZOC.bam ENCFF033ZHU https://www.encodeproject.org/files/ENCFF033ZHU/@@download/ENCFF033ZHU.bam 48.8 M 0 48.1 M 0.984 PE 101 101 native 21.4 M 0.0 M 21.1 M 0.866 0.99 0.99 82.60 225 1.07 3.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb3f086a-56ca-4b35-911b-b4617f8aa4a5/@@download/cross_correlation_plot/ENCFF853FSAENCFF217XYK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB211COY michael-snyder:HEK_eGFP-ZNF16_FRT_ChIP_L1 "ENCFF217XYK,ENCFF853FSA" HiSeq 2000 2016-09-14T19:18:49.835516+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9v2003695gqq4YJBj8kK9 ENCSR093HXE https://www.encodeproject.org/experiments/ENCSR093HXE "recombinant protein,transcription factor" eGFP-ZNF16-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF130UZR https://www.encodeproject.org/files/ENCFF130UZR/@@download/ENCFF130UZR.bam ENCFF920KXH https://www.encodeproject.org/files/ENCFF920KXH/@@download/ENCFF920KXH.bam 38.2 M 0 34.8 M 0.910 PE 101 101 native 15.2 M 0.0 M 15.1 M 0.790 0.99 0.99 127.36 185 1.11 3.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/bde69dce-2297-4f8c-bfd0-bd4a62dd3795/@@download/cross_correlation_plot/ENCFF394DERENCFF456OPD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB085HYQ michael-snyder:HEK_eGFP-ZNF16_FRT_ChIP_L2 "ENCFF394DER,ENCFF456OPD" HiSeq 2000 2016-09-14T19:17:22.617276+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9v6Q0369JPg0Xjj75v4Bg ENCSR661AXW https://www.encodeproject.org/experiments/ENCSR661AXW "recombinant protein,transcription factor" eGFP-ZNF169-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF459JEN https://www.encodeproject.org/files/ENCFF459JEN/@@download/ENCFF459JEN.bam ENCFF761HBW https://www.encodeproject.org/files/ENCFF761HBW/@@download/ENCFF761HBW.bam 65.1 M 0 62.6 M 0.962 PE 101 101 native 26.9 M 0.0 M 26.7 M 0.822 0.99 0.99 138.95 205 1.06 4.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/225dfc67-78f6-4308-b57e-f9bf3a193682/@@download/cross_correlation_plot/ENCFF390IPWENCFF645XVN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB683PYY michael-snyder:HEK_eGFP-ZNF169_FRT_ChIP_L1 "ENCFF645XVN,ENCFF390IPW" HiSeq 2000 2016-12-15T03:54:10.969903+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBVj0369F1Xbp2BQqJxpG ENCSR661AXW https://www.encodeproject.org/experiments/ENCSR661AXW "recombinant protein,transcription factor" eGFP-ZNF169-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF837OHG https://www.encodeproject.org/files/ENCFF837OHG/@@download/ENCFF837OHG.bam ENCFF254ZCH https://www.encodeproject.org/files/ENCFF254ZCH/@@download/ENCFF254ZCH.bam 70.4 M 0 67.8 M 0.963 PE 101 101 native 29.2 M 0.0 M 28.9 M 0.822 0.99 0.99 133.11 210 1.05 3.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/732afb2a-8f5c-476a-96bd-42623424484a/@@download/cross_correlation_plot/ENCFF167QBTENCFF515XEA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB220TRZ michael-snyder:HEK_eGFP-ZNF169_FRT_ChIP_L2 "ENCFF515XEA,ENCFF167QBT" HiSeq 2000 2016-12-15T06:13:24.116755+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFq003696vv3xJBbkJ9FQ ENCSR516VQK https://www.encodeproject.org/experiments/ENCSR516VQK "recombinant protein,transcription factor" eGFP-ZNF174-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF125WGU https://www.encodeproject.org/files/ENCFF125WGU/@@download/ENCFF125WGU.bam ENCFF645ZGF https://www.encodeproject.org/files/ENCFF645ZGF/@@download/ENCFF645ZGF.bam 147.0 M 0 144.8 M 0.985 PE 101 101 native 63.7 M 0.0 M 55.8 M 0.760 0.88 0.88 7.92 185 1.03 8.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/a63d8c7b-3c2d-4dba-b997-b124e06977d9/@@download/cross_correlation_plot/ENCFF700ORLENCFF969XQA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB916SSD michael-snyder:HEK_eGFP-ZNF174_FRT_ChIP_L1 "ENCFF700ORL,ENCFF969XQA" HiSeq 4000 2017-03-04T18:24:45.050709+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv4000369JGG095Jvz4vp0 ENCSR516VQK https://www.encodeproject.org/experiments/ENCSR516VQK "recombinant protein,transcription factor" eGFP-ZNF174-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF881MAH https://www.encodeproject.org/files/ENCFF881MAH/@@download/ENCFF881MAH.bam ENCFF576XQV https://www.encodeproject.org/files/ENCFF576XQV/@@download/ENCFF576XQV.bam 179.8 M 0 177.5 M 0.987 PE 101 101 native 77.8 M 0.0 M 68.4 M 0.761 0.88 0.88 8.05 190 1.03 7.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/07164730-54b7-4ceb-91cb-0db97b0406d6/@@download/cross_correlation_plot/ENCFF783BKLENCFF464DYS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB904QZA michael-snyder:HEK_eGFP-ZNF174_FRT_ChIP_L2 "ENCFF464DYS,ENCFF783BKL" HiSeq 4000 2017-03-04T18:26:49.892422+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv4800369994fv3jBY5yfF ENCSR103GAK https://www.encodeproject.org/experiments/ENCSR103GAK "recombinant protein,transcription factor" eGFP-ZNF175-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF107BYB https://www.encodeproject.org/files/ENCFF107BYB/@@download/ENCFF107BYB.bam ENCFF145YDT https://www.encodeproject.org/files/ENCFF145YDT/@@download/ENCFF145YDT.bam 60.1 M 0 58.7 M 0.977 PE 101 101 native 25.7 M 0.0 M 25.4 M 0.845 0.99 0.99 78.99 195 1.07 3.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/04a15239-3094-4cec-9ec5-c194e86e50e7/@@download/cross_correlation_plot/ENCFF076GRKENCFF574XTS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB692FMX michael-snyder:HEK_eGFP-ZNF175_FRT_ChIP_L1 "ENCFF574XTS,ENCFF076GRK" HiSeq 2000 2016-09-14T19:18:55.556920+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9xKj036994Jx4PVBXKB7j ENCSR103GAK https://www.encodeproject.org/experiments/ENCSR103GAK "recombinant protein,transcription factor" eGFP-ZNF175-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF662QGV https://www.encodeproject.org/files/ENCFF662QGV/@@download/ENCFF662QGV.bam ENCFF158FIE https://www.encodeproject.org/files/ENCFF158FIE/@@download/ENCFF158FIE.bam 60.1 M 0 58.6 M 0.975 PE 101 101 native 25.6 M 0.0 M 25.0 M 0.832 0.98 0.98 41.19 205 1.07 3.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/a3077f06-d485-4b67-92ab-7da8b3bcc396/@@download/cross_correlation_plot/ENCFF131OXTENCFF565BCY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB011CRM michael-snyder:HEK_eGFP-ZNF175_FRT_ChIP_L2 "ENCFF565BCY,ENCFF131OXT" HiSeq 2000 2016-09-14T19:18:47.712308+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9xXj036994Jx4PVBXKB80 ENCSR977HTH https://www.encodeproject.org/experiments/ENCSR977HTH "recombinant protein,transcription factor" eGFP-ZNF18-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF491NLK https://www.encodeproject.org/files/ENCFF491NLK/@@download/ENCFF491NLK.bam ENCFF814FZD https://www.encodeproject.org/files/ENCFF814FZD/@@download/ENCFF814FZD.bam 48.5 M 0 47.3 M 0.976 PE 101 101 native 21.0 M 0.0 M 20.3 M 0.836 0.96 0.96 27.83 210 1.11 2.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9fc3bc8-9fb6-4840-b610-ad2e90ebf4db/@@download/cross_correlation_plot/ENCFF317GWCENCFF368CYV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB043ZDC michael-snyder:HEK_eGFP-ZNF18_FRT_ChIP_L1 "ENCFF368CYV,ENCFF317GWC" HiSeq 2000 2016-09-14T19:36:56.523139+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9f400369GYv1KkxpKXvQy ENCSR977HTH https://www.encodeproject.org/experiments/ENCSR977HTH "recombinant protein,transcription factor" eGFP-ZNF18-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF206SEB https://www.encodeproject.org/files/ENCFF206SEB/@@download/ENCFF206SEB.bam ENCFF200ANM https://www.encodeproject.org/files/ENCFF200ANM/@@download/ENCFF200ANM.bam 48.0 M 0 47.0 M 0.979 PE 101 101 native 20.9 M 0.0 M 20.3 M 0.844 0.97 0.97 31.17 210 1.12 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/a595a94c-ee07-46ad-a989-69b1a0e47f6f/@@download/cross_correlation_plot/ENCFF943EALENCFF420ZMB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB032CPO michael-snyder:HEK_eGFP-ZNF18_FRT_ChIP_L2 "ENCFF943EAL,ENCFF420ZMB" HiSeq 2000 2016-09-14T19:40:10.011938+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9f8j03690q324KVG1qQ5B ENCSR811JJM https://www.encodeproject.org/experiments/ENCSR811JJM "transcription factor,recombinant protein" eGFP-ZNF19-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF628HJJ https://www.encodeproject.org/files/ENCFF628HJJ/@@download/ENCFF628HJJ.bam ENCFF450BIR https://www.encodeproject.org/files/ENCFF450BIR/@@download/ENCFF450BIR.bam 56.4 M 0 55.3 M 0.981 PE 101 101 native 24.4 M 0.0 M 23.6 M 0.838 0.97 0.97 31.41 205 1.06 4.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/43f37e1a-9157-4ff8-a750-e243be103924/@@download/cross_correlation_plot/ENCFF836EUUENCFF942YMQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB311XZG michael-snyder:HEK_eGFP-ZNF19_FRT_ChIP_L1 "ENCFF836EUU,ENCFF942YMQ" HiSeq 2000 2016-12-15T03:29:38.064877+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFpQ03693Bb8J2B4yy9qF ENCSR811JJM https://www.encodeproject.org/experiments/ENCSR811JJM "transcription factor,recombinant protein" eGFP-ZNF19-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF113CDP https://www.encodeproject.org/files/ENCFF113CDP/@@download/ENCFF113CDP.bam ENCFF244XLC https://www.encodeproject.org/files/ENCFF244XLC/@@download/ENCFF244XLC.bam 45.9 M 0 45.1 M 0.981 PE 101 101 native 19.9 M 0.0 M 19.0 M 0.828 0.96 0.96 22.58 210 1.07 5.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/602f74a0-5426-4bb7-9ec3-16270cc26d6d/@@download/cross_correlation_plot/ENCFF164VSRENCFF758UPX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB116ZVJ michael-snyder:HEK_eGFP-ZNF19_FRT_ChIP_L2 "ENCFF758UPX,ENCFF164VSR" HiSeq 2000 2016-12-15T02:35:25.048913+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJ1803691VQjVJByZkKjB ENCSR534NZI https://www.encodeproject.org/experiments/ENCSR534NZI "recombinant protein,transcription factor" eGFP-ZNF195-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF563SWH https://www.encodeproject.org/files/ENCFF563SWH/@@download/ENCFF563SWH.bam ENCFF357QOI https://www.encodeproject.org/files/ENCFF357QOI/@@download/ENCFF357QOI.bam 99.0 M 0 95.2 M 0.962 PE 101 101 native 40.7 M 0.0 M 37.8 M 0.763 0.93 0.93 13.96 190 1.05 3.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/95828b73-ea29-46cb-baf3-b29adae6dcbb/@@download/cross_correlation_plot/ENCFF990OISENCFF419HBK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB217JST michael-snyder:HEK_eGFP-ZNF195_FRT_ChIP_L1 "ENCFF990OIS,ENCFF419HBK" HiSeq 4000 2017-02-14T17:37:16.284780+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0pj0036979pgj3P6ZbQ2V ENCSR534NZI https://www.encodeproject.org/experiments/ENCSR534NZI "recombinant protein,transcription factor" eGFP-ZNF195-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF371KSC https://www.encodeproject.org/files/ENCFF371KSC/@@download/ENCFF371KSC.bam ENCFF778CER https://www.encodeproject.org/files/ENCFF778CER/@@download/ENCFF778CER.bam 90.2 M 0 88.1 M 0.976 PE 101 101 native 38.3 M 0.0 M 34.6 M 0.768 0.91 0.90 10.34 220 1.04 4.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/11a268fa-b2c5-4fa1-b4d6-54ce61dcfc3d/@@download/cross_correlation_plot/ENCFF708HJSENCFF999SJJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB365JGD michael-snyder:HEK_eGFP-ZNF195_FRT_ChIP_L2 "ENCFF999SJJ,ENCFF708HJS" HiSeq 4000 2017-02-14T17:36:57.553080+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0q1j03694KQ1X3PV7BFXg ENCSR011CKE https://www.encodeproject.org/experiments/ENCSR011CKE "recombinant protein,transcription factor" eGFP-ZNF2-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF033WZV https://www.encodeproject.org/files/ENCFF033WZV/@@download/ENCFF033WZV.bam ENCFF614CHD https://www.encodeproject.org/files/ENCFF614CHD/@@download/ENCFF614CHD.bam 72.0 M 0 70.6 M 0.981 PE 101 101 native 31.2 M 0.0 M 30.6 M 0.851 0.98 0.98 60.98 215 1.07 2.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/fff6184e-513a-43e6-b917-d88b5212b3e4/@@download/cross_correlation_plot/ENCFF229CUEENCFF567XFI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB838GRG michael-snyder:HEK_eGFP-ZNF2_FRT_ChIP_L1 "ENCFF229CUE,ENCFF567XFI" HiSeq 2000 2016-09-14T19:21:35.795457+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9qKj0369Kkk1Yvk89K1YJ ENCSR011CKE https://www.encodeproject.org/experiments/ENCSR011CKE "recombinant protein,transcription factor" eGFP-ZNF2-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF826IAN https://www.encodeproject.org/files/ENCFF826IAN/@@download/ENCFF826IAN.bam ENCFF973AIL https://www.encodeproject.org/files/ENCFF973AIL/@@download/ENCFF973AIL.bam 65.2 M 0 64.1 M 0.982 PE 101 101 native 28.4 M 0.0 M 27.8 M 0.854 0.98 0.98 55.50 225 1.07 2.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1916af8-e58a-460e-abf6-98ebb680f9c2/@@download/cross_correlation_plot/ENCFF218OLAENCFF482SYF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB685MAE michael-snyder:HEK_eGFP-ZNF2_FRT_ChIP_L2 "ENCFF218OLA,ENCFF482SYF" HiSeq 2000 2016-09-14T19:20:40.698873+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9qY0036997y2b0k8qBJk9 ENCSR996FYT https://www.encodeproject.org/experiments/ENCSR996FYT "recombinant protein,transcription factor" eGFP-ZNF202-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF623VBL https://www.encodeproject.org/files/ENCFF623VBL/@@download/ENCFF623VBL.bam ENCFF106SUL https://www.encodeproject.org/files/ENCFF106SUL/@@download/ENCFF106SUL.bam 59.3 M 0 57.8 M 0.975 PE 101 101 native 25.4 M 0.0 M 25.0 M 0.845 0.99 0.99 80.57 210 1.06 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/914ca8cf-cdeb-4598-a93f-1ceda1c721cd/@@download/cross_correlation_plot/ENCFF083PWCENCFF597BCH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB301ZOD michael-snyder:HEK_eGFP-ZNF202_FRT_ChIP_L1 "ENCFF597BCH,ENCFF083PWC" HiSeq 2000 2016-09-14T19:23:38.247709+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9G6Q03696gGz8k04XPz6G ENCSR996FYT https://www.encodeproject.org/experiments/ENCSR996FYT "recombinant protein,transcription factor" eGFP-ZNF202-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF343NMF https://www.encodeproject.org/files/ENCFF343NMF/@@download/ENCFF343NMF.bam ENCFF088QHZ https://www.encodeproject.org/files/ENCFF088QHZ/@@download/ENCFF088QHZ.bam 53.6 M 0 52.4 M 0.977 PE 101 101 native 23.0 M 0.0 M 22.4 M 0.834 0.97 0.97 34.36 210 1.07 4.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa866d15-7f5a-4733-91c1-e325408c9424/@@download/cross_correlation_plot/ENCFF352QLCENCFF927JLA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB548ICK michael-snyder:HEK_eGFP-ZNF202_FRT_ChIP_L2 "ENCFF352QLC,ENCFF927JLA" HiSeq 2000 2016-09-14T19:19:23.041063+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9GF80369Fb155KvKKzQVf ENCSR365DQH https://www.encodeproject.org/experiments/ENCSR365DQH "recombinant protein,transcription factor" eGFP-ZNF211-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF571NTO https://www.encodeproject.org/files/ENCFF571NTO/@@download/ENCFF571NTO.bam ENCFF931WBA https://www.encodeproject.org/files/ENCFF931WBA/@@download/ENCFF931WBA.bam 44.6 M 0 43.5 M 0.975 PE 101 101 native 19.1 M 0.0 M 18.4 M 0.828 0.97 0.97 29.35 205 1.08 4.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d123786-56ee-4db6-af32-b3ee4ef714d3/@@download/cross_correlation_plot/ENCFF651FCKENCFF255DCC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB782CPX michael-snyder:HEK_eGFP-ZNF211_FRT_ChIP_L1 "ENCFF255DCC,ENCFF651FCK" HiSeq 2000 2016-12-15T02:30:35.176210+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBXQ0369B26QY29p8ppzx ENCSR365DQH https://www.encodeproject.org/experiments/ENCSR365DQH "recombinant protein,transcription factor" eGFP-ZNF211-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF333OOX https://www.encodeproject.org/files/ENCFF333OOX/@@download/ENCFF333OOX.bam ENCFF658OAR https://www.encodeproject.org/files/ENCFF658OAR/@@download/ENCFF658OAR.bam 58.9 M 0 57.8 M 0.981 PE 101 101 native 25.5 M 0.0 M 25.1 M 0.852 0.99 0.99 68.83 215 1.06 3.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/66f8667d-d5dd-4559-a3e7-cfc36f994e31/@@download/cross_correlation_plot/ENCFF688OBAENCFF460ZPX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB729OHZ michael-snyder:HEK_eGFP-ZNF211_FRT_ChIP_L2 "ENCFF460ZPX,ENCFF688OBA" HiSeq 2000 2016-12-15T06:11:43.418406+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJvQ03691VQjVJByZkKp2 ENCSR906PCS https://www.encodeproject.org/experiments/ENCSR906PCS "recombinant protein,transcription factor" eGFP-ZNF223-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF347NTF https://www.encodeproject.org/files/ENCFF347NTF/@@download/ENCFF347NTF.bam ENCFF846XRU https://www.encodeproject.org/files/ENCFF846XRU/@@download/ENCFF846XRU.bam 61.8 M 0 56.8 M 0.919 PE 101 101 native 24.6 M 0.0 M 23.6 M 0.764 0.96 0.96 24.80 215 1.06 4.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f61ccfd-68df-44f7-a033-15958f7fa1a0/@@download/cross_correlation_plot/ENCFF937ADBENCFF220JCD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB005SGP michael-snyder:HEK_eGFP-ZNF223_FRT_ChIP_L1 "ENCFF220JCD,ENCFF937ADB" HiSeq 2000 2016-12-15T03:03:01.939743+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18q9JQ03693Bb8J2B4yy9gP ENCSR906PCS https://www.encodeproject.org/experiments/ENCSR906PCS "recombinant protein,transcription factor" eGFP-ZNF223-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF939QHA https://www.encodeproject.org/files/ENCFF939QHA/@@download/ENCFF939QHA.bam ENCFF848ILW https://www.encodeproject.org/files/ENCFF848ILW/@@download/ENCFF848ILW.bam 63.4 M 0 59.3 M 0.935 PE 101 101 native 25.7 M 0.0 M 24.8 M 0.783 0.96 0.96 27.57 215 1.06 4.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/18084242-45d2-4a30-a3bf-36064fcd0216/@@download/cross_correlation_plot/ENCFF569SLSENCFF784JLB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB131UWB michael-snyder:HEK_eGFP-ZNF223_FRT_ChIP_L2 "ENCFF569SLS,ENCFF784JLB" HiSeq 2000 2016-12-15T03:46:38.952822+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBp00369G1Z412B01V1qz ENCSR679KXF https://www.encodeproject.org/experiments/ENCSR679KXF "recombinant protein,transcription factor" eGFP-ZNF23-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF197XQY https://www.encodeproject.org/files/ENCFF197XQY/@@download/ENCFF197XQY.bam ENCFF639JVU https://www.encodeproject.org/files/ENCFF639JVU/@@download/ENCFF639JVU.bam 78.5 M 0 75.8 M 0.966 PE 101 101 native 32.5 M 0.0 M 32.3 M 0.822 0.99 0.99 127.59 200 1.05 3.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1afcf62-f610-4cf9-a3c3-df1d0f95aab1/@@download/cross_correlation_plot/ENCFF311MIDENCFF258FCV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB218RAJ michael-snyder:HEK_eGFP-ZNF23_FRT_ChIP_L1 "ENCFF258FCV,ENCFF311MID" HiSeq 2000 2016-12-15T06:14:43.134215+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18q9f00369FGK86Fk16zx56 ENCSR679KXF https://www.encodeproject.org/experiments/ENCSR679KXF "recombinant protein,transcription factor" eGFP-ZNF23-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF183KFV https://www.encodeproject.org/files/ENCFF183KFV/@@download/ENCFF183KFV.bam ENCFF208LRB https://www.encodeproject.org/files/ENCFF208LRB/@@download/ENCFF208LRB.bam 63.0 M 0 61.7 M 0.980 PE 101 101 native 27.2 M 0.0 M 26.4 M 0.839 0.97 0.97 37.16 215 1.06 4.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/db3f7286-cf32-4673-8510-6dbb9e850936/@@download/cross_correlation_plot/ENCFF767STUENCFF783NMT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB587ZKC michael-snyder:HEK_eGFP-ZNF23_FRT_ChIP_L2 "ENCFF783NMT,ENCFF767STU" HiSeq 2000 2016-12-15T06:12:54.348189+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qGG803695ZjjX2BpbFB88 ENCSR440COG https://www.encodeproject.org/experiments/ENCSR440COG "recombinant protein,transcription factor" eGFP-ZNF239-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF582UQP https://www.encodeproject.org/files/ENCFF582UQP/@@download/ENCFF582UQP.bam ENCFF651ELM https://www.encodeproject.org/files/ENCFF651ELM/@@download/ENCFF651ELM.bam 52.4 M 0 51.2 M 0.977 PE 101 101 native 22.4 M 0.0 M 22.2 M 0.847 0.99 0.99 131.70 195 1.07 3.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d47d52c-4b42-4752-a04c-589af97ac165/@@download/cross_correlation_plot/ENCFF876PMYENCFF912QAD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB485KVU michael-snyder:HEK_eGFP-ZNF239_FRT_ChIP_L1 "ENCFF876PMY,ENCFF912QAD" HiSeq 2000 2016-09-14T19:22:00.284025+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8bv80369JP9931xpgP8q9 ENCSR440COG https://www.encodeproject.org/experiments/ENCSR440COG "recombinant protein,transcription factor" eGFP-ZNF239-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF940EAU https://www.encodeproject.org/files/ENCFF940EAU/@@download/ENCFF940EAU.bam ENCFF983WNG https://www.encodeproject.org/files/ENCFF983WNG/@@download/ENCFF983WNG.bam 62.1 M 0 59.5 M 0.959 PE 101 101 native 26.0 M 0.0 M 25.7 M 0.829 0.99 0.99 117.25 190 1.07 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/79123773-b4d5-4b96-b7d9-db4c35b53b5c/@@download/cross_correlation_plot/ENCFF586BYRENCFF352PQY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB599OTW michael-snyder:HEK_eGFP-ZNF239_FRT_ChIP_L2 "ENCFF352PQY,ENCFF586BYR" HiSeq 2000 2016-09-14T19:23:27.489971+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8f100369GYv1KkxpKXv6B ENCSR984MDV https://www.encodeproject.org/experiments/ENCSR984MDV "recombinant protein,transcription factor" eGFP-ZNF24-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF193XUN https://www.encodeproject.org/files/ENCFF193XUN/@@download/ENCFF193XUN.bam ENCFF058SQY https://www.encodeproject.org/files/ENCFF058SQY/@@download/ENCFF058SQY.bam 58.7 M 0 57.0 M 0.971 PE 101 101 native 25.3 M 0.0 M 25.0 M 0.852 0.99 0.99 91.72 215 1.08 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/f300695d-0999-44f5-bffb-868ab0b1eaeb/@@download/cross_correlation_plot/ENCFF185DELENCFF038XSJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB727PNF michael-snyder:HEK_eGFP-ZNF24_FRT_ChIP_L1 "ENCFF185DEL,ENCFF038XSJ" HiSeq 2000 2016-09-14T19:19:27.784509+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9qjj03698Xg7B7xb4pfG4 ENCSR984MDV https://www.encodeproject.org/experiments/ENCSR984MDV "recombinant protein,transcription factor" eGFP-ZNF24-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF703RJE https://www.encodeproject.org/files/ENCFF703RJE/@@download/ENCFF703RJE.bam ENCFF295IVF https://www.encodeproject.org/files/ENCFF295IVF/@@download/ENCFF295IVF.bam 51.2 M 0 48.7 M 0.950 PE 101 101 native 21.5 M 0.0 M 20.7 M 0.810 0.97 0.97 29.35 225 1.09 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/825324e1-9dfa-4b94-8049-eef6c05cdbf8/@@download/cross_correlation_plot/ENCFF652POLENCFF725NIO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB725VAD michael-snyder:HEK_eGFP-ZNF24_FRT_ChIP_L2 "ENCFF652POL,ENCFF725NIO" HiSeq 2000 2016-09-14T19:20:12.794789+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9qxQ0369PzggBJ5BgpK1y ENCSR338SEM https://www.encodeproject.org/experiments/ENCSR338SEM "recombinant protein,transcription factor" eGFP-ZNF248-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF136ZLW https://www.encodeproject.org/files/ENCFF136ZLW/@@download/ENCFF136ZLW.bam ENCFF447DQM https://www.encodeproject.org/files/ENCFF447DQM/@@download/ENCFF447DQM.bam 78.5 M 0 76.1 M 0.969 PE 101 101 native 32.7 M 0.0 M 30.3 M 0.772 0.93 0.93 13.42 210 1.05 4.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef1c6fbd-c889-4436-997a-b6faa5c4f69d/@@download/cross_correlation_plot/ENCFF076DJFENCFF578AVN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB246WKT michael-snyder:HEK_eGFP-ZNF248_FRT_ChIP_L1 "ENCFF076DJF,ENCFF578AVN" HiSeq 4000 2017-02-14T17:36:31.263988+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0kjj036957x9g3pyJ2kzz ENCSR338SEM https://www.encodeproject.org/experiments/ENCSR338SEM "recombinant protein,transcription factor" eGFP-ZNF248-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF503ISP https://www.encodeproject.org/files/ENCFF503ISP/@@download/ENCFF503ISP.bam ENCFF793HDZ https://www.encodeproject.org/files/ENCFF793HDZ/@@download/ENCFF793HDZ.bam 103.4 M 0 100.4 M 0.971 PE 101 101 native 42.9 M 0.0 M 38.8 M 0.751 0.90 0.90 10.18 205 1.05 3.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e0a6020-1f0c-4066-ade5-d0976d9772bd/@@download/cross_correlation_plot/ENCFF079WWCENCFF104LKB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB591BGZ michael-snyder:HEK_eGFP-ZNF248_FRT_ChIP_L2 "ENCFF079WWC,ENCFF104LKB" HiSeq 4000 2017-02-14T17:37:46.959714+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0pB80369PzPQy3QGy077x ENCSR028EGI https://www.encodeproject.org/experiments/ENCSR028EGI "recombinant protein,transcription factor" eGFP-ZNF26-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF663CXE https://www.encodeproject.org/files/ENCFF663CXE/@@download/ENCFF663CXE.bam ENCFF404DRR https://www.encodeproject.org/files/ENCFF404DRR/@@download/ENCFF404DRR.bam 70.7 M 0 69.0 M 0.977 PE 101 101 native 29.8 M 0.0 M 28.5 M 0.807 0.96 0.96 22.68 220 1.06 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9a7d270-f009-49d6-9bb5-2601174b9472/@@download/cross_correlation_plot/ENCFF385MZKENCFF338YPL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB686TNO michael-snyder:HEK_eGFP-ZNF26_FRT_ChIP_L1 "ENCFF338YPL,ENCFF385MZK" HiSeq 2000 2016-12-15T06:12:46.402412+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFX00369B26QY29p8pq2Y ENCSR028EGI https://www.encodeproject.org/experiments/ENCSR028EGI "recombinant protein,transcription factor" eGFP-ZNF26-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF606HTE https://www.encodeproject.org/files/ENCFF606HTE/@@download/ENCFF606HTE.bam ENCFF397HVF https://www.encodeproject.org/files/ENCFF397HVF/@@download/ENCFF397HVF.bam 62.4 M 0 60.6 M 0.971 PE 101 101 native 26.2 M 0.0 M 25.3 M 0.811 0.97 0.97 28.77 215 1.06 4.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/09e1e863-192b-4dc0-b9e8-d31fe900b132/@@download/cross_correlation_plot/ENCFF903BWTENCFF465EOJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB150SGT michael-snyder:HEK_eGFP-ZNF26_FRT_ChIP_L2 "ENCFF465EOJ,ENCFF903BWT" HiSeq 2000 2016-12-15T04:02:16.983706+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qGf003696vv3xJBbkJ9Jg ENCSR466VYP https://www.encodeproject.org/experiments/ENCSR466VYP "recombinant protein,transcription factor" eGFP-ZNF266-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF381GNT https://www.encodeproject.org/files/ENCFF381GNT/@@download/ENCFF381GNT.bam ENCFF714FNS https://www.encodeproject.org/files/ENCFF714FNS/@@download/ENCFF714FNS.bam 52.9 M 0 46.2 M 0.874 PE 101 101 native 20.2 M 0.0 M 19.7 M 0.746 0.98 0.98 49.24 200 1.08 4.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/592ef35c-345f-49b7-af1c-c6de819c83a8/@@download/cross_correlation_plot/ENCFF083CVOENCFF163PCX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB482RMO michael-snyder:HEK_eGFP-ZNF266_FRT_ChIP_L1 "ENCFF083CVO,ENCFF163PCX" HiSeq 2000 2016-12-15T02:26:03.735859+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJ6003691VQjVJByZkKkQ ENCSR466VYP https://www.encodeproject.org/experiments/ENCSR466VYP "recombinant protein,transcription factor" eGFP-ZNF266-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF432CZZ https://www.encodeproject.org/files/ENCFF432CZZ/@@download/ENCFF432CZZ.bam ENCFF636PLY https://www.encodeproject.org/files/ENCFF636PLY/@@download/ENCFF636PLY.bam 41.2 M 0 35.1 M 0.851 PE 101 101 native 15.3 M 0.0 M 15.0 M 0.728 0.98 0.98 54.22 200 1.10 3.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc231301-a33f-4729-bd6f-fa056f6f55ea/@@download/cross_correlation_plot/ENCFF103HSXENCFF143DZT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB888OBA michael-snyder:HEK_eGFP-ZNF266_FRT_ChIP_L2 "ENCFF143DZT,ENCFF103HSX" HiSeq 2000 2016-12-15T01:38:32.723662+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJfQ0369G1Z412B01V1zx ENCSR178QVJ https://www.encodeproject.org/experiments/ENCSR178QVJ "recombinant protein,transcription factor" eGFP-ZNF274-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF607DUB https://www.encodeproject.org/files/ENCFF607DUB/@@download/ENCFF607DUB.bam ENCFF805RLH https://www.encodeproject.org/files/ENCFF805RLH/@@download/ENCFF805RLH.bam 65.8 M 0 62.6 M 0.951 PE 101 101 native 26.6 M 0.0 M 25.9 M 0.786 0.97 0.97 37.63 210 1.07 3.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/a00f2102-e7eb-4f8f-9675-6a997b2d1eda/@@download/cross_correlation_plot/ENCFF267OTOENCFF005EKN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB249UQG michael-snyder:HEK_eGFP-ZNF274_FRT_ChIP_L1 "ENCFF267OTO,ENCFF005EKN" HiSeq 2000 2016-12-15T03:50:25.351074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFJj0369F1Xbp2BQqJxqq ENCSR178QVJ https://www.encodeproject.org/experiments/ENCSR178QVJ "recombinant protein,transcription factor" eGFP-ZNF274-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF230WSL https://www.encodeproject.org/files/ENCFF230WSL/@@download/ENCFF230WSL.bam ENCFF107RYM https://www.encodeproject.org/files/ENCFF107RYM/@@download/ENCFF107RYM.bam 75.6 M 0 72.7 M 0.962 PE 101 101 native 30.8 M 0.0 M 30.5 M 0.807 0.99 0.99 112.18 210 1.05 3.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2bbe7b4-4bd0-48c8-b1f1-7584f5dd11d6/@@download/cross_correlation_plot/ENCFF364YNQENCFF060CVH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB198FZC michael-snyder:HEK_eGFP-ZNF274_FRT_ChIP_L2 "ENCFF060CVH,ENCFF364YNQ" HiSeq 2000 2016-12-15T06:14:09.984205+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qGbj0369FGk256Vf7Y91g ENCSR076KZW https://www.encodeproject.org/experiments/ENCSR076KZW "recombinant protein,transcription factor" eGFP-ZNF280C-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF890NVN https://www.encodeproject.org/files/ENCFF890NVN/@@download/ENCFF890NVN.bam ENCFF102XAE https://www.encodeproject.org/files/ENCFF102XAE/@@download/ENCFF102XAE.bam 55.8 M 0 53.8 M 0.964 PE 101 101 native 22.8 M 0.0 M 22.7 M 0.816 1.00 1.00 283.30 215 1.07 3.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/ccfadfe8-47b8-4de4-a2fd-390b05cfc9c1/@@download/cross_correlation_plot/ENCFF063UGXENCFF442NIG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB640KXU michael-snyder:HEK_eGFP-ZNF280C_FRT_ChIP_L1 "ENCFF063UGX,ENCFF442NIG" HiSeq 2000 2016-12-15T03:13:51.926775+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFJQ036974yqx29x5Z5zq ENCSR076KZW https://www.encodeproject.org/experiments/ENCSR076KZW "recombinant protein,transcription factor" eGFP-ZNF280C-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF687SRD https://www.encodeproject.org/files/ENCFF687SRD/@@download/ENCFF687SRD.bam ENCFF286OXL https://www.encodeproject.org/files/ENCFF286OXL/@@download/ENCFF286OXL.bam 50.2 M 0 48.6 M 0.967 PE 101 101 native 20.6 M 0.0 M 20.6 M 0.819 1.00 1.00 353.79 195 1.08 3.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/527b1923-3d3a-4ba5-b25f-dedfa6e9de37/@@download/cross_correlation_plot/ENCFF304UHLENCFF449JTR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB368XPV michael-snyder:HEK_eGFP-ZNF280C_FRT_ChIP_L2 "ENCFF449JTR,ENCFF304UHL" HiSeq 2000 2016-12-15T02:39:59.295495+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qG9003696vv3xJBbkJ9Gy ENCSR451CYX https://www.encodeproject.org/experiments/ENCSR451CYX "transcription factor,recombinant protein" eGFP-ZNF280D-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF252BCB https://www.encodeproject.org/files/ENCFF252BCB/@@download/ENCFF252BCB.bam ENCFF591RNC https://www.encodeproject.org/files/ENCFF591RNC/@@download/ENCFF591RNC.bam 64.6 M 0 62.5 M 0.969 PE 101 101 native 27.0 M 0.0 M 26.8 M 0.830 0.99 0.99 181.07 205 1.07 3.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ed96d22-4158-4293-82f3-fec45d9d60c0/@@download/cross_correlation_plot/ENCFF262KLXENCFF186HCK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB527VPB michael-snyder:HEK_eGFP-ZNF280D_FRT_ChIP_L1 "ENCFF186HCK,ENCFF262KLX" HiSeq 2000 2016-09-14T19:22:40.406511+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG99Xj036997y2b0k8qBJVp ENCSR451CYX https://www.encodeproject.org/experiments/ENCSR451CYX "transcription factor,recombinant protein" eGFP-ZNF280D-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF036LQK https://www.encodeproject.org/files/ENCFF036LQK/@@download/ENCFF036LQK.bam ENCFF522UGR https://www.encodeproject.org/files/ENCFF522UGR/@@download/ENCFF522UGR.bam 67.2 M 0 65.4 M 0.973 PE 101 101 native 28.2 M 0.0 M 28.1 M 0.836 1.00 1.00 235.97 210 1.06 3.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/1fb74337-f8ae-4692-a4af-03949af931a4/@@download/cross_correlation_plot/ENCFF280MIUENCFF255PXN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB398DTF michael-snyder:HEK_eGFP-ZNF280D_FRT_ChIP_L2 "ENCFF280MIU,ENCFF255PXN" HiSeq 2000 2016-09-14T19:20:09.838305+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG99g80369PzggBJ5BgpJpg ENCSR228PGT https://www.encodeproject.org/experiments/ENCSR228PGT "recombinant protein,transcription factor" eGFP-ZNF292-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF332IHG https://www.encodeproject.org/files/ENCFF332IHG/@@download/ENCFF332IHG.bam ENCFF914NNT https://www.encodeproject.org/files/ENCFF914NNT/@@download/ENCFF914NNT.bam 38.2 M 0 35.9 M 0.940 PE 101 101 native 15.6 M 0.0 M 14.8 M 0.774 0.95 0.95 18.85 210 1.09 3.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/93cf5760-8893-48cb-8278-e840c6feb35b/@@download/cross_correlation_plot/ENCFF104INTENCFF832UNH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB326OMD michael-snyder:HEK_eGFP-ZNF292_FRT_ChIP_L1 "ENCFF104INT,ENCFF832UNH" HiSeq 2000 2016-09-14T19:25:55.514086+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9QfQ03695XjQpy58BVJ44 ENCSR228PGT https://www.encodeproject.org/experiments/ENCSR228PGT "recombinant protein,transcription factor" eGFP-ZNF292-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF210NGO https://www.encodeproject.org/files/ENCFF210NGO/@@download/ENCFF210NGO.bam ENCFF563SXZ https://www.encodeproject.org/files/ENCFF563SXZ/@@download/ENCFF563SXZ.bam 57.4 M 0 55.5 M 0.966 PE 101 101 native 24.2 M 0.0 M 22.9 M 0.797 0.94 0.94 18.00 190 1.08 4.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/55b05351-815f-41d5-8e28-abd72c211360/@@download/cross_correlation_plot/ENCFF619CUOENCFF204KUD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB436NBV michael-snyder:HEK_eGFP-ZNF292_FRT_ChIP_L2 "ENCFF619CUO,ENCFF204KUD" HiSeq 2000 2016-09-14T19:28:12.253123+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9QqQ03698Xg7B7xb4pf50 ENCSR619QFT https://www.encodeproject.org/experiments/ENCSR619QFT "recombinant protein,transcription factor" eGFP-ZNF300-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF562VGW https://www.encodeproject.org/files/ENCFF562VGW/@@download/ENCFF562VGW.bam ENCFF075HZJ https://www.encodeproject.org/files/ENCFF075HZJ/@@download/ENCFF075HZJ.bam 73.5 M 0 70.8 M 0.964 PE 101 101 native 30.9 M 0.0 M 28.0 M 0.763 0.91 0.91 10.44 200 1.05 4.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/9dd38627-54e1-4185-a6b1-5e5a7dce95eb/@@download/cross_correlation_plot/ENCFF916WNUENCFF074ALH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB774EHE michael-snyder:HEK_eGFP-ZNF300_FRT_ChIP_L1 "ENCFF074ALH,ENCFF916WNU" HiSeq 4000 2017-02-16T07:02:21.949605+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X9Fk80369B35pQ3K5v3fpf ENCSR619QFT https://www.encodeproject.org/experiments/ENCSR619QFT "recombinant protein,transcription factor" eGFP-ZNF300-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF045PCB https://www.encodeproject.org/files/ENCFF045PCB/@@download/ENCFF045PCB.bam ENCFF437RHD https://www.encodeproject.org/files/ENCFF437RHD/@@download/ENCFF437RHD.bam 91.2 M 0 88.4 M 0.969 PE 101 101 native 38.3 M 0.0 M 34.0 M 0.745 0.89 0.89 8.58 200 1.05 3.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce3b9ad9-d934-422c-98ec-322f8105bfcb/@@download/cross_correlation_plot/ENCFF213XIXENCFF277HDI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB454YER michael-snyder:HEK_eGFP-ZNF300_FRT_ChIP_L2 "ENCFF277HDI,ENCFF213XIX" HiSeq 4000 2017-02-16T07:03:22.703425+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X9G7003692G2303qQ1f7B8 ENCSR513MGG https://www.encodeproject.org/experiments/ENCSR513MGG "recombinant protein,transcription factor" eGFP-ZNF302-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF493TBA https://www.encodeproject.org/files/ENCFF493TBA/@@download/ENCFF493TBA.bam ENCFF900NDU https://www.encodeproject.org/files/ENCFF900NDU/@@download/ENCFF900NDU.bam 53.0 M 0 51.9 M 0.979 PE 101 101 native 22.9 M 0.0 M 22.5 M 0.849 0.98 0.98 66.01 200 1.07 3.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/58c0036c-6256-4650-985d-fb962660cb0f/@@download/cross_correlation_plot/ENCFF061PFWENCFF988RPN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB814XYG michael-snyder:HEK_eGFP-ZNF302_FRT_ChIP_L1 "ENCFF061PFW,ENCFF988RPN" HiSeq 2000 2016-12-15T02:50:53.874162+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18q9J00369JqzzJB727gB8z ENCSR513MGG https://www.encodeproject.org/experiments/ENCSR513MGG "recombinant protein,transcription factor" eGFP-ZNF302-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF064EQH https://www.encodeproject.org/files/ENCFF064EQH/@@download/ENCFF064EQH.bam ENCFF743LQT https://www.encodeproject.org/files/ENCFF743LQT/@@download/ENCFF743LQT.bam 43.0 M 0 42.0 M 0.977 PE 101 101 native 18.5 M 0.0 M 18.2 M 0.846 0.98 0.98 65.51 195 1.08 3.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/75501dea-cd8b-4d3f-9df9-f1014b9babc6/@@download/cross_correlation_plot/ENCFF328EBFENCFF654OPW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB942VXR michael-snyder:HEK_eGFP-ZNF302_FRT_ChIP_L2 "ENCFF328EBF,ENCFF654OPW" HiSeq 2000 2016-12-15T02:13:48.260659+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qG5j03695fJKb0K3Z5kPj ENCSR096LSN https://www.encodeproject.org/experiments/ENCSR096LSN "recombinant protein,transcription factor" eGFP-ZNF311-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF219RUS https://www.encodeproject.org/files/ENCFF219RUS/@@download/ENCFF219RUS.bam ENCFF995QNS https://www.encodeproject.org/files/ENCFF995QNS/@@download/ENCFF995QNS.bam 83.4 M 0 80.6 M 0.966 PE 101 101 native 34.2 M 0.0 M 32.5 M 0.779 0.95 0.95 19.27 210 1.05 3.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/89554cd8-aebd-4edb-a945-9da6147244b4/@@download/cross_correlation_plot/ENCFF426JLQENCFF638DGT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB930NWF michael-snyder:HEK_eGFP-ZNF311_FRT_ChIP_L1 "ENCFF638DGT,ENCFF426JLQ" HiSeq 4000 2017-02-16T07:03:22.510774+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X9F6j03699ZYyb41kV0P3v ENCSR096LSN https://www.encodeproject.org/experiments/ENCSR096LSN "recombinant protein,transcription factor" eGFP-ZNF311-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF686YXQ https://www.encodeproject.org/files/ENCFF686YXQ/@@download/ENCFF686YXQ.bam ENCFF631MPQ https://www.encodeproject.org/files/ENCFF631MPQ/@@download/ENCFF631MPQ.bam 111.6 M 0 108.2 M 0.970 PE 101 101 native 45.9 M 0.0 M 42.9 M 0.769 0.93 0.93 14.82 210 1.04 4.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/f52f1655-6756-4d96-8b0d-73ee7a20921b/@@download/cross_correlation_plot/ENCFF901MLHENCFF395NAD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB397PBM michael-snyder:HEK_eGFP-ZNF311_FRT_ChIP_L2 "ENCFF395NAD,ENCFF901MLH" HiSeq 4000 2017-02-16T07:06:02.522864+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X9FV003699BJ8f3PbkVJ0k ENCSR768HOH https://www.encodeproject.org/experiments/ENCSR768HOH "recombinant protein,transcription factor" eGFP-ZNF324-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF521XIN https://www.encodeproject.org/files/ENCFF521XIN/@@download/ENCFF521XIN.bam ENCFF987VVH https://www.encodeproject.org/files/ENCFF987VVH/@@download/ENCFF987VVH.bam 61.4 M 0 59.0 M 0.962 PE 101 101 native 26.0 M 0.0 M 25.5 M 0.829 0.98 0.98 48.88 205 1.08 2.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec693e78-ba8a-42f8-b9b6-b539ab937c59/@@download/cross_correlation_plot/ENCFF909UDEENCFF447WRG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB238GBU michael-snyder:HEK_eGFP-ZNF324_FRT_ChIP_L1 "ENCFF909UDE,ENCFF447WRG" HiSeq 2000 2016-09-14T19:25:47.030563+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8pFQ03690qG5Zzk849xfk ENCSR768HOH https://www.encodeproject.org/experiments/ENCSR768HOH "recombinant protein,transcription factor" eGFP-ZNF324-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF342NOF https://www.encodeproject.org/files/ENCFF342NOF/@@download/ENCFF342NOF.bam ENCFF685JCR https://www.encodeproject.org/files/ENCFF685JCR/@@download/ENCFF685JCR.bam 58.6 M 0 56.3 M 0.961 PE 101 101 native 24.9 M 0.0 M 24.5 M 0.835 0.98 0.98 62.36 205 1.08 3.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8666da3-8dd8-4acd-b314-447ec8e349b1/@@download/cross_correlation_plot/ENCFF936RHDENCFF407FUY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB107BZP michael-snyder:HEK_eGFP-ZNF324_FRT_ChIP_L2 "ENCFF407FUY,ENCFF936RHD" HiSeq 2000 2016-09-14T19:24:55.804219+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8pP80369J6bkz8ZJ7qbpK ENCSR328SUD https://www.encodeproject.org/experiments/ENCSR328SUD "recombinant protein,transcription factor" eGFP-ZNF335-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF057WON https://www.encodeproject.org/files/ENCFF057WON/@@download/ENCFF057WON.bam ENCFF046YUV https://www.encodeproject.org/files/ENCFF046YUV/@@download/ENCFF046YUV.bam 52.2 M 0 50.0 M 0.959 PE 101 101 native 22.0 M 0.0 M 21.6 M 0.829 0.99 0.99 66.92 220 1.48 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d285a01-7747-4952-a5ef-429ef3ce907d/@@download/cross_correlation_plot/ENCFF251PNIENCFF860EDN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB907WNW michael-snyder:HEK_eGFP-ZNF335_FRT_ChIP_L1 "ENCFF251PNI,ENCFF860EDN" HiSeq 2000 2016-09-14T19:18:37.205160+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG950j0369PzggBJ5BgpJkG ENCSR328SUD https://www.encodeproject.org/experiments/ENCSR328SUD "recombinant protein,transcription factor" eGFP-ZNF335-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF526BIB https://www.encodeproject.org/files/ENCFF526BIB/@@download/ENCFF526BIB.bam ENCFF775UJK https://www.encodeproject.org/files/ENCFF775UJK/@@download/ENCFF775UJK.bam 50.5 M 0 49.0 M 0.969 PE 101 101 native 21.5 M 0.0 M 21.3 M 0.842 0.99 0.99 109.19 220 1.47 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b4291ee-8233-4190-ab7b-b1fbe2be28a6/@@download/cross_correlation_plot/ENCFF898JXSENCFF040FWR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB214OXD michael-snyder:HEK_eGFP-ZNF335_FRT_ChIP_L2 "ENCFF040FWR,ENCFF898JXS" HiSeq 2000 2016-09-14T19:18:51.825978+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG955Q0369Kkk1Yvk89K0x0 ENCSR727PIC https://www.encodeproject.org/experiments/ENCSR727PIC "recombinant protein,transcription factor" eGFP-ZNF34-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF844RRZ https://www.encodeproject.org/files/ENCFF844RRZ/@@download/ENCFF844RRZ.bam ENCFF485IJH https://www.encodeproject.org/files/ENCFF485IJH/@@download/ENCFF485IJH.bam 84.2 M 0 80.7 M 0.959 PE 101 101 native 34.7 M 0.0 M 27.6 M 0.656 0.80 0.79 4.78 225 1.09 2.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4f0ec38-4c72-4cf5-a68f-7f2cf0986b4c/@@download/cross_correlation_plot/ENCFF070RBEENCFF322UTY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB702XMI michael-snyder:HEK_eGFP-ZNF34_FRT_ChIP_L1 "ENCFF322UTY,ENCFF070RBE" HiSeq 4000 2017-03-04T18:17:32.721790+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv6V80369KJyp8829X59p6 ENCSR727PIC https://www.encodeproject.org/experiments/ENCSR727PIC "recombinant protein,transcription factor" eGFP-ZNF34-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF149UBZ https://www.encodeproject.org/files/ENCFF149UBZ/@@download/ENCFF149UBZ.bam ENCFF805BMI https://www.encodeproject.org/files/ENCFF805BMI/@@download/ENCFF805BMI.bam 72.3 M 0 68.2 M 0.943 PE 101 101 native 29.2 M 0.0 M 21.8 M 0.604 0.75 0.75 3.92 220 1.11 2.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae3fb317-f84a-41a5-bb1d-7503e5b63307/@@download/cross_correlation_plot/ENCFF327HOLENCFF489SBU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB977BDE michael-snyder:HEK_eGFP-ZNF34_FRT_ChIP_L2 "ENCFF489SBU,ENCFF327HOL" HiSeq 4000 2017-03-04T18:16:28.424217+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv6x803691bJyz3gyjyZ32 ENCSR185FOY https://www.encodeproject.org/experiments/ENCSR185FOY "recombinant protein,transcription factor" eGFP-ZNF341-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF481VHV https://www.encodeproject.org/files/ENCFF481VHV/@@download/ENCFF481VHV.bam ENCFF653XKX https://www.encodeproject.org/files/ENCFF653XKX/@@download/ENCFF653XKX.bam 50.8 M 0 49.2 M 0.968 PE 101 101 native 21.7 M 0.0 M 21.4 M 0.843 0.99 0.99 74.32 230 1.47 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/1bd12474-1816-47e3-8d5b-7354b1d2ea57/@@download/cross_correlation_plot/ENCFF436WRKENCFF198ZVP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB416YOM michael-snyder:HEK_eGFP-ZNF341_FRT_ChIP_L1 "ENCFF436WRK,ENCFF198ZVP" HiSeq 2000 2016-09-14T19:39:16.755692+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9ZJ00369PzggBJ5BgpJyJ ENCSR185FOY https://www.encodeproject.org/experiments/ENCSR185FOY "recombinant protein,transcription factor" eGFP-ZNF341-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF219EYD https://www.encodeproject.org/files/ENCFF219EYD/@@download/ENCFF219EYD.bam ENCFF653DEE https://www.encodeproject.org/files/ENCFF653DEE/@@download/ENCFF653DEE.bam 46.2 M 0 45.4 M 0.982 PE 101 101 native 20.3 M 0.0 M 19.6 M 0.847 0.96 0.96 26.58 245 1.42 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f060d1b-c520-403f-b604-1e05302700be/@@download/cross_correlation_plot/ENCFF176QOJENCFF677QBQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB207BQK michael-snyder:HEK_eGFP-ZNF341_FRT_ChIP_L2 "ENCFF176QOJ,ENCFF677QBQ" HiSeq 2000 2016-09-14T19:37:46.245355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9ZV00369PzXj14kJK8607 ENCSR854ORP https://www.encodeproject.org/experiments/ENCSR854ORP "recombinant protein,transcription factor" eGFP-ZNF350-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF871WHM https://www.encodeproject.org/files/ENCFF871WHM/@@download/ENCFF871WHM.bam ENCFF291ZQX https://www.encodeproject.org/files/ENCFF291ZQX/@@download/ENCFF291ZQX.bam 181.4 M 0 178.6 M 0.985 PE 101 101 native 77.8 M 0.0 M 70.6 M 0.779 0.91 0.91 10.72 190 1.03 6.47 Missing ENCLB022VOW michael-snyder:HEK_eGFP-ZNF350_FRT_ChIP_L1 "ENCFF810YUG,ENCFF777QMW" HiSeq 4000 2017-03-04T18:27:52.164117+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv31j0369Kyj9Q3k1bxZf0 ENCSR854ORP https://www.encodeproject.org/experiments/ENCSR854ORP "recombinant protein,transcription factor" eGFP-ZNF350-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF969XIH https://www.encodeproject.org/files/ENCFF969XIH/@@download/ENCFF969XIH.bam ENCFF822MRL https://www.encodeproject.org/files/ENCFF822MRL/@@download/ENCFF822MRL.bam 183.6 M 0 180.6 M 0.984 PE 101 101 native 78.2 M 0.0 M 70.4 M 0.766 0.90 0.90 9.89 210 1.03 11.79 Missing ENCLB168CDM michael-snyder:HEK_eGFP-ZNF350_FRT_ChIP_L2 "ENCFF738LVY,ENCFF321VUJ" HiSeq 4000 2017-03-04T18:27:54.993750+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv3J00369BJ6Pk3jp4J597 ENCSR289NSN https://www.encodeproject.org/experiments/ENCSR289NSN "recombinant protein,transcription factor" eGFP-ZNF354C-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF193NZD https://www.encodeproject.org/files/ENCFF193NZD/@@download/ENCFF193NZD.bam ENCFF423JUH https://www.encodeproject.org/files/ENCFF423JUH/@@download/ENCFF423JUH.bam 39.2 M 0 38.1 M 0.972 PE 101 101 native 16.8 M 0.0 M 16.6 M 0.849 0.99 0.99 78.81 200 1.09 4.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/31bb2b03-789a-483d-bc40-ecff0a005589/@@download/cross_correlation_plot/ENCFF647OXSENCFF781NWB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB020ELW michael-snyder:HEK_eGFP-ZNF354C_FRT_ChIP_L1 "ENCFF781NWB,ENCFF647OXS" HiSeq 2000 2016-09-14T19:22:15.840211+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8pzQ0369BvpJbQkBjP9VX ENCSR289NSN https://www.encodeproject.org/experiments/ENCSR289NSN "recombinant protein,transcription factor" eGFP-ZNF354C-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF414AQN https://www.encodeproject.org/files/ENCFF414AQN/@@download/ENCFF414AQN.bam ENCFF392DUA https://www.encodeproject.org/files/ENCFF392DUA/@@download/ENCFF392DUA.bam 50.3 M 0 49.2 M 0.978 PE 101 101 native 21.8 M 0.0 M 21.4 M 0.851 0.98 0.98 62.97 205 1.07 4.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa86550a-ebc8-4c66-9d37-02379adfad1e/@@download/cross_correlation_plot/ENCFF108LQSENCFF064VRM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB298SQN michael-snyder:HEK_eGFP-ZNF354C_FRT_ChIP_L2 "ENCFF108LQS,ENCFF064VRM" HiSeq 2000 2016-09-14T19:21:46.787885+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8q400369PzXj14kJK85f8 ENCSR715QNO https://www.encodeproject.org/experiments/ENCSR715QNO "transcription factor,recombinant protein" eGFP-ZNF362-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF690XBP https://www.encodeproject.org/files/ENCFF690XBP/@@download/ENCFF690XBP.bam ENCFF185JWO https://www.encodeproject.org/files/ENCFF185JWO/@@download/ENCFF185JWO.bam 108.2 M 0 105.0 M 0.971 PE 101 101 native 44.7 M 0.0 M 42.5 M 0.787 0.95 0.95 20.97 245 1.05 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a783624-5a03-434e-b5b1-bccb35a46848/@@download/cross_correlation_plot/ENCFF991IIZENCFF525CDJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB688ZVM michael-snyder:HEK_eGFP-ZNF362_FRT_ChIP_L1 "ENCFF525CDJ,ENCFF991IIZ" HiSeq 4000 2016-09-13T16:22:34.706144+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgbXj0369Fqz2kz97f8JpK ENCSR715QNO https://www.encodeproject.org/experiments/ENCSR715QNO "transcription factor,recombinant protein" eGFP-ZNF362-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF028BVH https://www.encodeproject.org/files/ENCFF028BVH/@@download/ENCFF028BVH.bam ENCFF881OJW https://www.encodeproject.org/files/ENCFF881OJW/@@download/ENCFF881OJW.bam 91.1 M 0 88.1 M 0.967 PE 101 101 native 37.5 M 0.0 M 35.9 M 0.788 0.96 0.96 23.95 220 1.05 2.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/a15c6f32-bf50-455f-9204-7eadce1fd824/@@download/cross_correlation_plot/ENCFF051TFEENCFF102GYW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB120ZAC michael-snyder:HEK_eGFP-ZNF362_FRT_ChIP_L2 "ENCFF102GYW,ENCFF051TFE" HiSeq 4000 2016-09-13T16:21:48.890325+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgbfj0369PBkYfgj4Z3K59 ENCSR106EBH https://www.encodeproject.org/experiments/ENCSR106EBH "transcription factor,recombinant protein" eGFP-ZNF366-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF822CZJ https://www.encodeproject.org/files/ENCFF822CZJ/@@download/ENCFF822CZJ.bam ENCFF212PUK https://www.encodeproject.org/files/ENCFF212PUK/@@download/ENCFF212PUK.bam 95.8 M 0 93.0 M 0.972 PE 101 101 native 40.5 M 0.0 M 38.3 M 0.799 0.95 0.94 18.08 245 1.13 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4273e5f-518e-4a81-9c48-6f887941cae4/@@download/cross_correlation_plot/ENCFF572AYVENCFF081RWN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB962TWM michael-snyder:HEK_eGFP-ZNF366_FRT_ChIP_L1 "ENCFF081RWN,ENCFF572AYV" HiSeq 4000 2016-09-13T16:21:41.704651+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgbqQ03696gGz8k04XPgxX ENCSR106EBH https://www.encodeproject.org/experiments/ENCSR106EBH "transcription factor,recombinant protein" eGFP-ZNF366-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF022KEN https://www.encodeproject.org/files/ENCFF022KEN/@@download/ENCFF022KEN.bam ENCFF414GFO https://www.encodeproject.org/files/ENCFF414GFO/@@download/ENCFF414GFO.bam 120.8 M 0 117.2 M 0.971 PE 101 101 native 51.0 M 0.0 M 48.4 M 0.801 0.95 0.95 19.29 230 1.12 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7061494-7e6a-4567-8d8c-5e3bf99d3424/@@download/cross_correlation_plot/ENCFF291MOBENCFF170KFC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB423HYM michael-snyder:HEK_eGFP-ZNF366_FRT_ChIP_L2 "ENCFF291MOB,ENCFF170KFC" HiSeq 4000 2016-09-13T16:23:55.117220+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgbzj0369JpJK47VQfv1Gj ENCSR210MET https://www.encodeproject.org/experiments/ENCSR210MET "recombinant protein,transcription factor" eGFP-ZNF391-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF395PJR https://www.encodeproject.org/files/ENCFF395PJR/@@download/ENCFF395PJR.bam ENCFF476JLN https://www.encodeproject.org/files/ENCFF476JLN/@@download/ENCFF476JLN.bam 62.2 M 0 60.7 M 0.977 PE 101 101 native 26.8 M 0.0 M 26.6 M 0.856 0.99 0.99 148.00 195 1.07 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f395c5a-ac91-40e2-943e-45f5bc7b3d27/@@download/cross_correlation_plot/ENCFF218PFQENCFF349BCP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB215KOR michael-snyder:HEK_eGFP-ZNF391_FRT_ChIP_L1 "ENCFF349BCP,ENCFF218PFQ" HiSeq 2000 2016-09-14T19:27:13.268851+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Pq00369F1Xf4jx84ZFVX ENCSR210MET https://www.encodeproject.org/experiments/ENCSR210MET "recombinant protein,transcription factor" eGFP-ZNF391-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF652BBO https://www.encodeproject.org/files/ENCFF652BBO/@@download/ENCFF652BBO.bam ENCFF867QNE https://www.encodeproject.org/files/ENCFF867QNE/@@download/ENCFF867QNE.bam 30.0 M 0 29.4 M 0.978 PE 101 101 native 13.0 M 0.0 M 12.9 M 0.859 1.00 1.00 202.95 205 1.11 4.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c622ac8-7102-41fe-8750-6ae1fb6cc131/@@download/cross_correlation_plot/ENCFF385QYNENCFF738AWV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB195JBS michael-snyder:HEK_eGFP-ZNF391_FRT_ChIP_L2 "ENCFF738AWV,ENCFF385QYN" HiSeq 2000 2016-09-14T19:25:10.152816+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Pyj03695XjQpy58BVJ2f ENCSR125DNC https://www.encodeproject.org/experiments/ENCSR125DNC "recombinant protein,transcription factor" eGFP-ZNF394-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF006YQA https://www.encodeproject.org/files/ENCFF006YQA/@@download/ENCFF006YQA.bam ENCFF725LYF https://www.encodeproject.org/files/ENCFF725LYF/@@download/ENCFF725LYF.bam 102.4 M 0 99.0 M 0.966 PE 101 101 native 43.5 M 0.0 M 40.3 M 0.787 0.93 0.93 13.62 220 1.10 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3295d0b-bc53-43ab-9b11-bc5a24af7d31/@@download/cross_correlation_plot/ENCFF117GAXENCFF402BMA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB070UQM michael-snyder:HEK_eGFP-ZNF394_FRT_ChIP_L1 "ENCFF402BMA,ENCFF117GAX" HiSeq 4000 2016-09-13T16:22:35.701056+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgfFj03698GBQPfZ4kgpFB ENCSR125DNC https://www.encodeproject.org/experiments/ENCSR125DNC "recombinant protein,transcription factor" eGFP-ZNF394-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF511AWC https://www.encodeproject.org/files/ENCFF511AWC/@@download/ENCFF511AWC.bam ENCFF033VDE https://www.encodeproject.org/files/ENCFF033VDE/@@download/ENCFF033VDE.bam 106.5 M 0 103.2 M 0.969 PE 101 101 native 45.3 M 0.0 M 35.9 M 0.675 0.80 0.79 4.77 225 1.08 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/589b8d0e-5c5e-4444-912d-69d11f8a6651/@@download/cross_correlation_plot/ENCFF814VNSENCFF911EMT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB582FEP michael-snyder:HEK_eGFP-ZNF394_FRT_ChIP_L2 "ENCFF911EMT,ENCFF814VNS" HiSeq 4000 2016-09-13T16:23:11.926615+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgfPj0369PVqq57xB7BzgQ ENCSR676ZEF https://www.encodeproject.org/experiments/ENCSR676ZEF "transcription factor,recombinant protein" eGFP-ZNF398-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF773VPD https://www.encodeproject.org/files/ENCFF773VPD/@@download/ENCFF773VPD.bam ENCFF643ARH https://www.encodeproject.org/files/ENCFF643ARH/@@download/ENCFF643ARH.bam 117.0 M 0 113.8 M 0.973 PE 101 101 native 49.4 M 0.0 M 46.4 M 0.793 0.94 0.94 16.15 205 1.15 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6e76ce5-99bf-4328-b450-bfccb22a3d67/@@download/cross_correlation_plot/ENCFF217XXNENCFF090IMJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB871GMM michael-snyder:HEK_eGFP-ZNF398_FRT_ChIP_L1 "ENCFF217XXN,ENCFF090IMJ" HiSeq 4000 2017-02-14T17:39:56.241287+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0jY803699BJ8f3PbkV0kP ENCSR676ZEF https://www.encodeproject.org/experiments/ENCSR676ZEF "transcription factor,recombinant protein" eGFP-ZNF398-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF592PEU https://www.encodeproject.org/files/ENCFF592PEU/@@download/ENCFF592PEU.bam ENCFF984BVF https://www.encodeproject.org/files/ENCFF984BVF/@@download/ENCFF984BVF.bam 92.1 M 0 89.1 M 0.967 PE 101 101 native 38.1 M 0.0 M 35.9 M 0.780 0.94 0.94 17.57 205 1.13 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e35f356-cc0a-4ebf-bd6f-9a7ee34ee176/@@download/cross_correlation_plot/ENCFF183GXLENCFF428FMZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB961ZBI michael-snyder:HEK_eGFP-ZNF398_FRT_ChIP_L2 "ENCFF428FMZ,ENCFF183GXL" HiSeq 4000 2017-02-14T17:37:32.486833+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0kKQ036957x9g3pyJ2kyy ENCSR669GUM https://www.encodeproject.org/experiments/ENCSR669GUM "recombinant protein,transcription factor" eGFP-ZNF404-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF482NBS https://www.encodeproject.org/files/ENCFF482NBS/@@download/ENCFF482NBS.bam ENCFF384BKC https://www.encodeproject.org/files/ENCFF384BKC/@@download/ENCFF384BKC.bam 48.7 M 0 47.8 M 0.981 PE 101 101 native 21.0 M 0.0 M 20.2 M 0.827 0.96 0.96 24.24 220 1.07 4.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d6376c8-0d25-4a55-b54e-6832bfc8a117/@@download/cross_correlation_plot/ENCFF491FIOENCFF916RIL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB025XZT michael-snyder:HEK_eGFP-ZNF404_FRT_ChIP_L1 "ENCFF491FIO,ENCFF916RIL" HiSeq 2000 2017-02-07T18:45:55.967441+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GQq900369348QfFzJqXzG4 ENCSR669GUM https://www.encodeproject.org/experiments/ENCSR669GUM "recombinant protein,transcription factor" eGFP-ZNF404-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF930CAN https://www.encodeproject.org/files/ENCFF930CAN/@@download/ENCFF930CAN.bam ENCFF505PWG https://www.encodeproject.org/files/ENCFF505PWG/@@download/ENCFF505PWG.bam 62.3 M 0 61.1 M 0.981 PE 101 101 native 26.9 M 0.0 M 25.8 M 0.830 0.96 0.96 24.31 205 1.06 4.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/57172220-2ea6-46b6-9d1c-dcdf7a8856c4/@@download/cross_correlation_plot/ENCFF052DGQENCFF816PKD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB744QWW michael-snyder:HEK_eGFP-ZNF404_FRT_ChIP_L2 "ENCFF052DGQ,ENCFF816PKD" HiSeq 2000 2017-02-07T18:46:55.932556+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GQqG003698Y174Fz56kKFQ ENCSR604CNJ https://www.encodeproject.org/experiments/ENCSR604CNJ "recombinant protein,transcription factor" eGFP-ZNF416-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF384OOV https://www.encodeproject.org/files/ENCFF384OOV/@@download/ENCFF384OOV.bam ENCFF019OLJ https://www.encodeproject.org/files/ENCFF019OLJ/@@download/ENCFF019OLJ.bam 64.9 M 0 62.7 M 0.966 PE 101 101 native 27.3 M 0.0 M 27.0 M 0.832 0.99 0.99 94.66 220 1.05 5.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/87a12001-62d5-427b-ac5e-ca73189c5ee7/@@download/cross_correlation_plot/ENCFF859HOCENCFF869MHB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB377QRR michael-snyder:HEK_eGFP-ZNF416_FRT_ChIP_L1 "ENCFF859HOC,ENCFF869MHB" HiSeq 2000 2016-12-15T03:57:29.344971+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qF800369F00q32BFF79Yg ENCSR604CNJ https://www.encodeproject.org/experiments/ENCSR604CNJ "recombinant protein,transcription factor" eGFP-ZNF416-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF937TCA https://www.encodeproject.org/files/ENCFF937TCA/@@download/ENCFF937TCA.bam ENCFF312TES https://www.encodeproject.org/files/ENCFF312TES/@@download/ENCFF312TES.bam 66.7 M 0 63.8 M 0.956 PE 101 101 native 27.7 M 0.0 M 27.3 M 0.818 0.98 0.98 63.64 210 1.06 5.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/04b5c503-dcfd-43ae-a6d9-af5a3437efad/@@download/cross_correlation_plot/ENCFF711PUHENCFF066WCC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB651GJU michael-snyder:HEK_eGFP-ZNF416_FRT_ChIP_L2 "ENCFF711PUH,ENCFF066WCC" HiSeq 2000 2016-12-15T06:12:55.212757+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJ5j0369FGk256Vf7Y92b ENCSR477OJI https://www.encodeproject.org/experiments/ENCSR477OJI "recombinant protein,transcription factor" eGFP-ZNF423-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF632DBT https://www.encodeproject.org/files/ENCFF632DBT/@@download/ENCFF632DBT.bam ENCFF674JEH https://www.encodeproject.org/files/ENCFF674JEH/@@download/ENCFF674JEH.bam 61.2 M 0 59.6 M 0.973 PE 101 101 native 26.4 M 0.0 M 26.2 M 0.857 0.99 0.99 158.38 200 1.07 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/4184ab52-2c38-4116-ac3d-50a99d1c3623/@@download/cross_correlation_plot/ENCFF336XLEENCFF015NKR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB442DRR michael-snyder:HEK_eGFP-ZNF423_FRT_ChIP_L1 "ENCFF015NKR,ENCFF336XLE" HiSeq 2000 2016-09-14T19:39:22.775570+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Zf0036994Jx4PVBXKB4J ENCSR477OJI https://www.encodeproject.org/experiments/ENCSR477OJI "recombinant protein,transcription factor" eGFP-ZNF423-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF289ROF https://www.encodeproject.org/files/ENCFF289ROF/@@download/ENCFF289ROF.bam ENCFF456PUZ https://www.encodeproject.org/files/ENCFF456PUZ/@@download/ENCFF456PUZ.bam 51.7 M 0 48.3 M 0.934 PE 101 101 native 21.4 M 0.0 M 21.3 M 0.824 0.99 0.99 146.62 195 1.08 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/19293f50-74d9-4bd2-b604-86bb1caf16c0/@@download/cross_correlation_plot/ENCFF268OZOENCFF286NOT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB623NON michael-snyder:HEK_eGFP-ZNF423_FRT_ChIP_L2 "ENCFF268OZO,ENCFF286NOT" HiSeq 2000 2016-09-14T19:38:15.397343+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Zkj03692xk39gZV1446X ENCSR224NFP https://www.encodeproject.org/experiments/ENCSR224NFP "recombinant protein,transcription factor" eGFP-ZNF426-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF021UNS https://www.encodeproject.org/files/ENCFF021UNS/@@download/ENCFF021UNS.bam ENCFF004ZYW https://www.encodeproject.org/files/ENCFF004ZYW/@@download/ENCFF004ZYW.bam 141.4 M 0 133.2 M 0.942 PE 101 101 native 57.2 M 0.0 M 40.9 M 0.578 0.72 0.72 3.57 220 1.08 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ce4f6cd-235c-4b2c-9c6d-d9b1229e963d/@@download/cross_correlation_plot/ENCFF052DTIENCFF160WFY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB953AML michael-snyder:HEK_eGFP-ZNF426_FRT_ChIP_L1 "ENCFF052DTI,ENCFF160WFY" HiSeq 4000 2017-03-09T17:48:51.822606+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F307Y4003693JJ5B0byxB9jK ENCSR224NFP https://www.encodeproject.org/experiments/ENCSR224NFP "recombinant protein,transcription factor" eGFP-ZNF426-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF846ILV https://www.encodeproject.org/files/ENCFF846ILV/@@download/ENCFF846ILV.bam ENCFF683NGC https://www.encodeproject.org/files/ENCFF683NGC/@@download/ENCFF683NGC.bam 90.7 M 0 85.0 M 0.937 PE 101 101 native 36.3 M 0.0 M 27.3 M 0.601 0.75 0.75 4.00 230 1.08 2.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/fae74ffc-9a05-4bd2-950a-78a281d7e08a/@@download/cross_correlation_plot/ENCFF734ILUENCFF936XZX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB710VIJ michael-snyder:HEK_eGFP-ZNF426_FRT_ChIP_L2 "ENCFF734ILU,ENCFF936XZX" HiSeq 4000 2017-03-09T17:44:33.738867+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F307YFQ0369231QyGqq181yP ENCSR586BRJ https://www.encodeproject.org/experiments/ENCSR586BRJ "recombinant protein,transcription factor" eGFP-ZNF433-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF228XTL https://www.encodeproject.org/files/ENCFF228XTL/@@download/ENCFF228XTL.bam ENCFF665ONW https://www.encodeproject.org/files/ENCFF665ONW/@@download/ENCFF665ONW.bam 48.4 M 0 47.4 M 0.978 PE 101 101 native 20.8 M 0.0 M 19.7 M 0.814 0.95 0.95 18.86 210 1.07 5.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e2304c7-2981-4e20-81e7-b3856219ecf8/@@download/cross_correlation_plot/ENCFF661FBGENCFF621DBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB105AOY michael-snyder:HEK_eGFP-ZNF433_FRT_ChIP_L1 "ENCFF621DBV,ENCFF661FBG" HiSeq 2000 2016-12-15T02:20:00.370809+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18q9j0036974yqx29x5Z5xB ENCSR586BRJ https://www.encodeproject.org/experiments/ENCSR586BRJ "recombinant protein,transcription factor" eGFP-ZNF433-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF525BUR https://www.encodeproject.org/files/ENCFF525BUR/@@download/ENCFF525BUR.bam ENCFF086HLM https://www.encodeproject.org/files/ENCFF086HLM/@@download/ENCFF086HLM.bam 47.3 M 0 46.4 M 0.980 PE 101 101 native 20.4 M 0.0 M 19.5 M 0.824 0.95 0.95 21.42 210 1.07 5.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f082a9d-f1c5-45f8-a019-301c1d9d2f9d/@@download/cross_correlation_plot/ENCFF380XROENCFF883WMZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB378PHZ michael-snyder:HEK_eGFP-ZNF433_FRT_ChIP_L2 "ENCFF380XRO,ENCFF883WMZ" HiSeq 2000 2016-12-15T02:22:13.838396+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBpj0369P8qVgK8XbYy75 ENCSR567XAM https://www.encodeproject.org/experiments/ENCSR567XAM "transcription factor,recombinant protein" eGFP-ZNF473-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF464PRX https://www.encodeproject.org/files/ENCFF464PRX/@@download/ENCFF464PRX.bam ENCFF388RYY https://www.encodeproject.org/files/ENCFF388RYY/@@download/ENCFF388RYY.bam 121.5 M 0 118.0 M 0.972 PE 101 101 native 50.7 M 0.0 M 47.2 M 0.777 0.93 0.93 14.09 205 1.04 4.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/05212e2e-2d61-4fee-93e3-e5b24c8bbd15/@@download/cross_correlation_plot/ENCFF204KLSENCFF952MEL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB488OCU michael-snyder:HEK_eGFP-ZNF473_FRT_ChIP_L1 "ENCFF952MEL,ENCFF204KLS" HiSeq 4000 2017-02-14T17:40:36.389129+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0gb003690y4Pq3qBQq7V3 ENCSR567XAM https://www.encodeproject.org/experiments/ENCSR567XAM "transcription factor,recombinant protein" eGFP-ZNF473-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF052ISO https://www.encodeproject.org/files/ENCFF052ISO/@@download/ENCFF052ISO.bam ENCFF046TFH https://www.encodeproject.org/files/ENCFF046TFH/@@download/ENCFF046TFH.bam 94.3 M 0 91.7 M 0.973 PE 101 101 native 39.5 M 0.0 M 37.2 M 0.790 0.94 0.94 17.05 215 1.05 3.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/cdc273b8-1b3c-4e6b-ae9c-cc52c7d7bcef/@@download/cross_correlation_plot/ENCFF126ZYTENCFF726VMX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB886RSQ michael-snyder:HEK_eGFP-ZNF473_FRT_ChIP_L2 "ENCFF126ZYT,ENCFF726VMX" HiSeq 4000 2017-02-14T17:37:39.013346+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0jB003694KQ1X3PV7BFPk ENCSR517DDU https://www.encodeproject.org/experiments/ENCSR517DDU "recombinant protein,transcription factor" eGFP-ZNF48-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF624RUU https://www.encodeproject.org/files/ENCFF624RUU/@@download/ENCFF624RUU.bam ENCFF084RAR https://www.encodeproject.org/files/ENCFF084RAR/@@download/ENCFF084RAR.bam 71.9 M 0 68.8 M 0.957 PE 101 101 native 28.9 M 0.0 M 28.8 M 0.800 1.00 1.00 314.87 180 1.06 2.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/b58b82a7-3c0d-4451-b593-156edeba3b3d/@@download/cross_correlation_plot/ENCFF189SGXENCFF355BXZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB468OZN michael-snyder:HEK_eGFP-ZNF48_FRT_ChIP_L1 "ENCFF189SGX,ENCFF355BXZ" HiSeq 2000 2016-09-14T19:40:00.986221+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9g9Q03696gGz8k04XPzFZ ENCSR517DDU https://www.encodeproject.org/experiments/ENCSR517DDU "recombinant protein,transcription factor" eGFP-ZNF48-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF727SXP https://www.encodeproject.org/files/ENCFF727SXP/@@download/ENCFF727SXP.bam ENCFF698XKF https://www.encodeproject.org/files/ENCFF698XKF/@@download/ENCFF698XKF.bam 61.3 M 0 58.7 M 0.958 PE 101 101 native 24.6 M 0.0 M 24.5 M 0.800 1.00 1.00 436.28 180 1.07 3.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/56bfd711-dcb3-4d90-af3c-7d4e217dfc52/@@download/cross_correlation_plot/ENCFF060CCVENCFF352ZKQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB535FCH michael-snyder:HEK_eGFP-ZNF48_FRT_ChIP_L2 "ENCFF060CCV,ENCFF352ZKQ" HiSeq 2000 2016-09-14T19:38:03.851909+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9gJj0369PBkYfgj4Z3b4Q ENCSR363XBR https://www.encodeproject.org/experiments/ENCSR363XBR "recombinant protein,transcription factor" eGFP-ZNF488-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF361WFA https://www.encodeproject.org/files/ENCFF361WFA/@@download/ENCFF361WFA.bam ENCFF984NEJ https://www.encodeproject.org/files/ENCFF984NEJ/@@download/ENCFF984NEJ.bam 49.8 M 0 48.5 M 0.973 PE 101 101 native 21.2 M 0.0 M 20.9 M 0.840 0.99 0.99 97.96 200 1.08 3.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/42b92235-2638-41a5-8ddc-21c5daffe558/@@download/cross_correlation_plot/ENCFF193OEUENCFF314RZT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB908DRS michael-snyder:HEK_eGFP-ZNF488_FRT_ChIP_L1 "ENCFF314RZT,ENCFF193OEU" HiSeq 2000 2016-09-14T19:21:29.431665+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8fjj0369F1Xf4jx84ZFF3 ENCSR363XBR https://www.encodeproject.org/experiments/ENCSR363XBR "recombinant protein,transcription factor" eGFP-ZNF488-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF086BGG https://www.encodeproject.org/files/ENCFF086BGG/@@download/ENCFF086BGG.bam ENCFF156DTE https://www.encodeproject.org/files/ENCFF156DTE/@@download/ENCFF156DTE.bam 52.0 M 0 50.7 M 0.976 PE 101 101 native 22.2 M 0.0 M 22.0 M 0.846 0.99 0.99 99.99 200 1.08 3.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/0be82808-e7b6-447a-8a7a-610ba0ae26d2/@@download/cross_correlation_plot/ENCFF508MSAENCFF348DMK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB692LRV michael-snyder:HEK_eGFP-ZNF488_FRT_ChIP_L2 "ENCFF508MSA,ENCFF348DMK" HiSeq 2000 2016-09-14T19:21:52.403114+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8fvj036994Jx4PVBXK9gB ENCSR897JCM https://www.encodeproject.org/experiments/ENCSR897JCM "recombinant protein,transcription factor" eGFP-ZNF491-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF929VDB https://www.encodeproject.org/files/ENCFF929VDB/@@download/ENCFF929VDB.bam ENCFF882DNM https://www.encodeproject.org/files/ENCFF882DNM/@@download/ENCFF882DNM.bam 53.6 M 0 52.3 M 0.976 PE 101 101 native 23.0 M 0.0 M 22.3 M 0.830 0.97 0.97 29.49 210 1.07 4.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e449b34-b285-4c15-9f6a-89b3df66a660/@@download/cross_correlation_plot/ENCFF723BUNENCFF298JQC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB229VFX michael-snyder:HEK_eGFP-ZNF491_FRT_ChIP_L1 "ENCFF298JQC,ENCFF723BUN" HiSeq 2000 2017-03-04T18:21:50.322939+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv6Fj0369Jvq8g82Pv82B9 ENCSR897JCM https://www.encodeproject.org/experiments/ENCSR897JCM "recombinant protein,transcription factor" eGFP-ZNF491-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF381YPW https://www.encodeproject.org/files/ENCFF381YPW/@@download/ENCFF381YPW.bam ENCFF853FMZ https://www.encodeproject.org/files/ENCFF853FMZ/@@download/ENCFF853FMZ.bam 54.8 M 0 53.7 M 0.979 PE 101 101 native 23.6 M 0.0 M 22.5 M 0.822 0.95 0.95 21.32 210 1.07 5.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0daaff1-138e-4ae7-aa98-d2545d4a791d/@@download/cross_correlation_plot/ENCFF543YKBENCFF534EOG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB516FCM michael-snyder:HEK_eGFP-ZNF491_FRT_ChIP_L2 "ENCFF534EOG,ENCFF543YKB" HiSeq 2000 2017-03-04T18:21:43.525321+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv6gj0369Kyj9Q3k1bxZg6 ENCSR550ZZK https://www.encodeproject.org/experiments/ENCSR550ZZK "recombinant protein,transcription factor" eGFP-ZNF493-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF344TIM https://www.encodeproject.org/files/ENCFF344TIM/@@download/ENCFF344TIM.bam ENCFF357BNI https://www.encodeproject.org/files/ENCFF357BNI/@@download/ENCFF357BNI.bam 59.0 M 0 57.8 M 0.980 PE 101 101 native 25.6 M 0.0 M 24.3 M 0.824 0.95 0.95 19.92 215 1.06 6.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/a692cb07-e7d2-410d-9f3f-f8d7d34eefa2/@@download/cross_correlation_plot/ENCFF191HHOENCFF701UNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB585BQF michael-snyder:HEK_eGFP-ZNF493_FRT_ChIP_L1 "ENCFF701UNE,ENCFF191HHO" HiSeq 2000 2016-12-15T03:30:54.881797+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBg803695ZjjX2BpbFB56 ENCSR550ZZK https://www.encodeproject.org/experiments/ENCSR550ZZK "recombinant protein,transcription factor" eGFP-ZNF493-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF886NRG https://www.encodeproject.org/files/ENCFF886NRG/@@download/ENCFF886NRG.bam ENCFF200SDD https://www.encodeproject.org/files/ENCFF200SDD/@@download/ENCFF200SDD.bam 64.5 M 0 55.7 M 0.864 PE 101 101 native 24.2 M 0.0 M 23.5 M 0.728 0.97 0.97 36.85 205 1.07 4.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1133858-3e96-4938-916c-e05fb74a508e/@@download/cross_correlation_plot/ENCFF790RTPENCFF525HHM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB809CVQ michael-snyder:HEK_eGFP-ZNF493_FRT_ChIP_L2 "ENCFF525HHM,ENCFF790RTP" HiSeq 2000 2016-12-15T03:29:29.557914+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFX80369FGk256Vf7Y8yf ENCSR461ZJT https://www.encodeproject.org/experiments/ENCSR461ZJT "recombinant protein,transcription factor" eGFP-ZNF501-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF479EPN https://www.encodeproject.org/files/ENCFF479EPN/@@download/ENCFF479EPN.bam ENCFF349VXB https://www.encodeproject.org/files/ENCFF349VXB/@@download/ENCFF349VXB.bam 95.3 M 0 92.6 M 0.971 PE 101 101 native 40.8 M 0.0 M 38.4 M 0.806 0.94 0.94 17.62 235 1.05 2.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/db9dfe2a-c33a-468d-a815-24abfb69d30d/@@download/cross_correlation_plot/ENCFF640PHTENCFF359NBE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB446HCO michael-snyder:HEK_eGFP-ZNF501_FRT_ChIP_L1 "ENCFF640PHT,ENCFF359NBE" HiSeq 4000 2016-09-13T16:20:47.363261+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgg580369Fqz2kz97f8JvG ENCSR461ZJT https://www.encodeproject.org/experiments/ENCSR461ZJT "recombinant protein,transcription factor" eGFP-ZNF501-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF875UDE https://www.encodeproject.org/files/ENCFF875UDE/@@download/ENCFF875UDE.bam ENCFF834DTI https://www.encodeproject.org/files/ENCFF834DTI/@@download/ENCFF834DTI.bam 118.2 M 0 115.2 M 0.975 PE 101 101 native 50.7 M 0.0 M 47.7 M 0.807 0.95 0.95 18.19 235 1.04 2.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/601f926c-fb2d-4b48-bc4d-c2ffd98791e8/@@download/cross_correlation_plot/ENCFF716DCYENCFF436WIC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB698DAK michael-snyder:HEK_eGFP-ZNF501_FRT_ChIP_L2 "ENCFF716DCY,ENCFF436WIC" HiSeq 4000 2016-09-13T16:22:40.365146+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzFgg8j0369JpJK47VQfv1Jf ENCSR897RVP https://www.encodeproject.org/experiments/ENCSR897RVP "recombinant protein,transcription factor" eGFP-ZNF514-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF058LBG https://www.encodeproject.org/files/ENCFF058LBG/@@download/ENCFF058LBG.bam ENCFF078NVW https://www.encodeproject.org/files/ENCFF078NVW/@@download/ENCFF078NVW.bam 56.4 M 0 55.3 M 0.979 PE 101 101 native 24.3 M 0.0 M 23.8 M 0.844 0.98 0.98 46.78 200 1.06 4.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/c633f2dd-8227-469f-a291-00f3504e1632/@@download/cross_correlation_plot/ENCFF785LEUENCFF414LZB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB610BWI michael-snyder:HEK_eGFP-ZNF514_FRT_ChIP_L1 "ENCFF414LZB,ENCFF785LEU" HiSeq 2000 2016-12-15T03:16:11.224576+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJY80369FGk256Vf7Y93Q ENCSR897RVP https://www.encodeproject.org/experiments/ENCSR897RVP "recombinant protein,transcription factor" eGFP-ZNF514-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF016ALA https://www.encodeproject.org/files/ENCFF016ALA/@@download/ENCFF016ALA.bam ENCFF865TXQ https://www.encodeproject.org/files/ENCFF865TXQ/@@download/ENCFF865TXQ.bam 58.7 M 0 57.4 M 0.978 PE 101 101 native 25.2 M 0.0 M 24.8 M 0.846 0.98 0.98 62.51 200 1.06 3.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/1bb6ce88-11fb-4933-a3e9-4e7399905472/@@download/cross_correlation_plot/ENCFF497UCWENCFF852WDA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB200QRC michael-snyder:HEK_eGFP-ZNF514_FRT_ChIP_L2 "ENCFF852WDA,ENCFF497UCW" HiSeq 2000 2016-12-15T03:42:59.723013+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qK2803694jP708pv8X4z9 ENCSR159GFL https://www.encodeproject.org/experiments/ENCSR159GFL "recombinant protein,transcription factor" eGFP-ZNF518A-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF446DII https://www.encodeproject.org/files/ENCFF446DII/@@download/ENCFF446DII.bam ENCFF333QJJ https://www.encodeproject.org/files/ENCFF333QJJ/@@download/ENCFF333QJJ.bam 54.9 M 0 47.7 M 0.869 PE 101 101 native 20.8 M 0.0 M 18.9 M 0.687 0.91 0.91 10.71 200 1.18 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb4c5b65-b432-4c92-94f5-b4245644c35a/@@download/cross_correlation_plot/ENCFF174HBRENCFF574GQY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB741SRO michael-snyder:HEK_eGFP-ZNF518A_FRT_ChIP_L1 "ENCFF174HBR,ENCFF574GQY" HiSeq 2000 2016-09-14T19:27:31.571895+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9P0j036994Jx4PVBXKB24 ENCSR159GFL https://www.encodeproject.org/experiments/ENCSR159GFL "recombinant protein,transcription factor" eGFP-ZNF518A-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF532LHG https://www.encodeproject.org/files/ENCFF532LHG/@@download/ENCFF532LHG.bam ENCFF021MWC https://www.encodeproject.org/files/ENCFF021MWC/@@download/ENCFF021MWC.bam 43.0 M 0 39.0 M 0.908 PE 101 101 native 17.0 M 0.0 M 16.0 M 0.743 0.94 0.94 16.14 230 1.17 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/2360aa9e-7fef-4553-8862-18c06348c52c/@@download/cross_correlation_plot/ENCFF808AJPENCFF453FDD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB259AER michael-snyder:HEK_eGFP-ZNF518A_FRT_ChIP_L2 "ENCFF453FDD,ENCFF808AJP" HiSeq 2000 2016-09-14T19:26:19.804234+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9P4Q0369JPg0Xjj75v457 ENCSR665KYH https://www.encodeproject.org/experiments/ENCSR665KYH "transcription factor,recombinant protein" eGFP-ZNF521-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF858TGO https://www.encodeproject.org/files/ENCFF858TGO/@@download/ENCFF858TGO.bam ENCFF144KRW https://www.encodeproject.org/files/ENCFF144KRW/@@download/ENCFF144KRW.bam 79.0 M 0 76.7 M 0.971 PE 101 101 native 32.9 M 0.0 M 30.2 M 0.765 0.92 0.92 11.78 210 1.05 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/8787d8c6-be79-4ffe-b994-011dbc89702c/@@download/cross_correlation_plot/ENCFF780IGTENCFF485RLD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB069VZH michael-snyder:HEK_eGFP-ZNF521_FRT_ChIP_L1 "ENCFF780IGT,ENCFF485RLD" HiSeq 4000 2017-02-16T07:02:57.487722+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X9BKQ03695xXvG3Q1QPP7B ENCSR665KYH https://www.encodeproject.org/experiments/ENCSR665KYH "transcription factor,recombinant protein" eGFP-ZNF521-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF250JTL https://www.encodeproject.org/files/ENCFF250JTL/@@download/ENCFF250JTL.bam ENCFF222NIK https://www.encodeproject.org/files/ENCFF222NIK/@@download/ENCFF222NIK.bam 95.2 M 0 92.7 M 0.973 PE 101 101 native 40.1 M 0.0 M 36.0 M 0.756 0.90 0.90 9.40 205 1.05 4.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1078c51-18b2-435e-a70c-850dc6190d63/@@download/cross_correlation_plot/ENCFF109KFSENCFF364NNY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB412HIR michael-snyder:HEK_eGFP-ZNF521_FRT_ChIP_L2 "ENCFF364NNY,ENCFF109KFS" HiSeq 4000 2017-02-16T07:03:39.885990+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X9Bg003699y1p73xPpzF48 ENCSR418NZA https://www.encodeproject.org/experiments/ENCSR418NZA "recombinant protein,transcription factor" eGFP-ZNF524-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF163EWS https://www.encodeproject.org/files/ENCFF163EWS/@@download/ENCFF163EWS.bam ENCFF578NVE https://www.encodeproject.org/files/ENCFF578NVE/@@download/ENCFF578NVE.bam 61.7 M 0 57.7 M 0.935 PE 101 101 native 24.4 M 0.0 M 24.3 M 0.789 1.00 1.00 219.96 190 1.08 2.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/758b12f9-1c3e-4ef0-a529-4cd090e784ee/@@download/cross_correlation_plot/ENCFF537WRBENCFF043DWE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB706FWC michael-snyder:HEK_eGFP-ZNF524_FRT_ChIP_L1 "ENCFF537WRB,ENCFF043DWE" HiSeq 2000 2016-12-15T03:19:55.495439+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBg003694jP708pv8X4kg ENCSR418NZA https://www.encodeproject.org/experiments/ENCSR418NZA "recombinant protein,transcription factor" eGFP-ZNF524-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF187CYO https://www.encodeproject.org/files/ENCFF187CYO/@@download/ENCFF187CYO.bam ENCFF069QOR https://www.encodeproject.org/files/ENCFF069QOR/@@download/ENCFF069QOR.bam 49.1 M 0 48.3 M 0.985 PE 101 101 native 21.5 M 0.0 M 21.3 M 0.868 0.99 0.99 133.63 220 1.07 3.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/769ba808-4130-4100-ad4d-ae3bd80e4169/@@download/cross_correlation_plot/ENCFF103KFMENCFF891ZQL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB167ZKT michael-snyder:HEK_eGFP-ZNF524_FRT_ChIP_L2 "ENCFF103KFM,ENCFF891ZQL" HiSeq 2000 2016-12-15T02:33:58.825084+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qG5j03695fJKb0K3Z5kPv ENCSR701RXW https://www.encodeproject.org/experiments/ENCSR701RXW "transcription factor,recombinant protein" eGFP-ZNF530-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF478PNG https://www.encodeproject.org/files/ENCFF478PNG/@@download/ENCFF478PNG.bam ENCFF132OEN https://www.encodeproject.org/files/ENCFF132OEN/@@download/ENCFF132OEN.bam 47.3 M 0 45.8 M 0.970 PE 101 101 native 20.1 M 0.0 M 19.5 M 0.824 0.97 0.97 32.78 200 1.07 4.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/095cdeb2-a0b7-4555-8d8f-f6860fed6dac/@@download/cross_correlation_plot/ENCFF693AUPENCFF644SON.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB688UBJ michael-snyder:HEK_eGFP-ZNF530_FRT_ChIP_L1 "ENCFF644SON,ENCFF693AUP" HiSeq 2000 2016-12-15T02:22:59.734230+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18q9x00369F00q32BFF79V7 ENCSR701RXW https://www.encodeproject.org/experiments/ENCSR701RXW "transcription factor,recombinant protein" eGFP-ZNF530-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF122SAG https://www.encodeproject.org/files/ENCFF122SAG/@@download/ENCFF122SAG.bam ENCFF465JHR https://www.encodeproject.org/files/ENCFF465JHR/@@download/ENCFF465JHR.bam 45.9 M 0 44.6 M 0.970 PE 101 101 native 19.6 M 0.0 M 19.0 M 0.826 0.97 0.97 30.72 205 1.08 4.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/64a01e97-1abd-444f-8685-bc04eaa0097a/@@download/cross_correlation_plot/ENCFF778REXENCFF101WQA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB049IZO michael-snyder:HEK_eGFP-ZNF530_FRT_ChIP_L2 "ENCFF101WQA,ENCFF778REX" HiSeq 2000 2016-12-15T02:18:01.410026+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFJ80369G1Z412B01V1xV ENCSR167XFW https://www.encodeproject.org/experiments/ENCSR167XFW "recombinant protein,transcription factor" eGFP-ZNF544-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF581DEV https://www.encodeproject.org/files/ENCFF581DEV/@@download/ENCFF581DEV.bam ENCFF804UMZ https://www.encodeproject.org/files/ENCFF804UMZ/@@download/ENCFF804UMZ.bam 86.6 M 0 84.2 M 0.972 PE 101 101 native 36.4 M 0.0 M 33.1 M 0.765 0.91 0.91 10.96 205 1.05 3.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/11c9f8e3-ae19-4853-8f37-ed33357f46e6/@@download/cross_correlation_plot/ENCFF081KQFENCFF763MGN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB866DFU michael-snyder:HEK_eGFP-ZNF544_FRT_ChIP_L1 "ENCFF081KQF,ENCFF763MGN" HiSeq 4000 2017-05-05T10:59:58.428812+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yv5j0369JxZVj70Jj06F6 ENCSR167XFW https://www.encodeproject.org/experiments/ENCSR167XFW "recombinant protein,transcription factor" eGFP-ZNF544-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF899LDZ https://www.encodeproject.org/files/ENCFF899LDZ/@@download/ENCFF899LDZ.bam ENCFF046YKG https://www.encodeproject.org/files/ENCFF046YKG/@@download/ENCFF046YKG.bam 90.0 M 0 87.2 M 0.968 PE 101 101 native 37.3 M 0.0 M 34.0 M 0.756 0.91 0.91 11.14 195 1.05 3.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/a14560d0-b9b1-4b0b-bb96-70d5c719f7c5/@@download/cross_correlation_plot/ENCFF201QVEENCFF904BBB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB622YNQ michael-snyder:HEK_eGFP-ZNF544_FRT_ChIP_L2 "ENCFF201QVE,ENCFF904BBB" HiSeq 4000 2017-05-05T11:07:37.556006+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yv9803692Z7YP70b61zxB ENCSR909TSW https://www.encodeproject.org/experiments/ENCSR909TSW "recombinant protein,transcription factor" eGFP-ZNF547-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF996RPG https://www.encodeproject.org/files/ENCFF996RPG/@@download/ENCFF996RPG.bam ENCFF156GIS https://www.encodeproject.org/files/ENCFF156GIS/@@download/ENCFF156GIS.bam 56.5 M 0 51.5 M 0.911 PE 101 101 native 22.5 M 0.0 M 22.3 M 0.791 0.99 0.99 188.28 205 1.07 3.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0985cbf-1f43-4c8c-83c0-775eaa228147/@@download/cross_correlation_plot/ENCFF965LJPENCFF069MUW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB933CIQ michael-snyder:HEK_eGFP-ZNF547_FRT_ChIP_L1 "ENCFF069MUW,ENCFF965LJP" HiSeq 2000 2016-09-14T19:22:13.433384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG937Q03693JZG3y9p8vzgB ENCSR909TSW https://www.encodeproject.org/experiments/ENCSR909TSW "recombinant protein,transcription factor" eGFP-ZNF547-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF730QBB https://www.encodeproject.org/files/ENCFF730QBB/@@download/ENCFF730QBB.bam ENCFF893MCG https://www.encodeproject.org/files/ENCFF893MCG/@@download/ENCFF893MCG.bam 54.3 M 0 49.6 M 0.914 PE 101 101 native 21.7 M 0.0 M 21.5 M 0.791 0.99 0.99 104.38 200 1.07 3.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/26fec73e-364b-475d-885f-af4f1b0c9ccb/@@download/cross_correlation_plot/ENCFF923CFUENCFF382DBU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB243OPL michael-snyder:HEK_eGFP-ZNF547_FRT_ChIP_L2 "ENCFF923CFU,ENCFF382DBU" HiSeq 2000 2016-09-14T19:18:55.878744+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG93G0036973J1BzVpJ4j94 ENCSR892ZTO https://www.encodeproject.org/experiments/ENCSR892ZTO "transcription factor,recombinant protein" eGFP-ZNF548-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF894YZH https://www.encodeproject.org/files/ENCFF894YZH/@@download/ENCFF894YZH.bam ENCFF422WGT https://www.encodeproject.org/files/ENCFF422WGT/@@download/ENCFF422WGT.bam 62.8 M 0 61.3 M 0.976 PE 101 101 native 26.9 M 0.0 M 26.2 M 0.834 0.97 0.97 37.25 215 1.06 5.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/f14fe6c6-fbf7-4025-bddb-09fc10036a59/@@download/cross_correlation_plot/ENCFF871JTSENCFF681LCG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB988HVS michael-snyder:HEK_eGFP-ZNF548_FRT_ChIP_L1 "ENCFF681LCG,ENCFF871JTS" HiSeq 2000 2016-12-15T03:47:57.401915+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18q9pQ0369FGk256Vf7Y8pB ENCSR892ZTO https://www.encodeproject.org/experiments/ENCSR892ZTO "transcription factor,recombinant protein" eGFP-ZNF548-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF460FTQ https://www.encodeproject.org/files/ENCFF460FTQ/@@download/ENCFF460FTQ.bam ENCFF485DAZ https://www.encodeproject.org/files/ENCFF485DAZ/@@download/ENCFF485DAZ.bam 70.9 M 0 68.1 M 0.960 PE 101 101 native 29.7 M 0.0 M 29.3 M 0.827 0.99 0.99 78.97 205 1.06 3.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc7f1490-87e8-4a87-8e12-3405d7789efd/@@download/cross_correlation_plot/ENCFF546URXENCFF168WHE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB629UUD michael-snyder:HEK_eGFP-ZNF548_FRT_ChIP_L2 "ENCFF546URX,ENCFF168WHE" HiSeq 2000 2016-12-15T06:12:50.422745+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFyj0369F00q32BFF79Zk ENCSR185QFX https://www.encodeproject.org/experiments/ENCSR185QFX "recombinant protein,transcription factor" eGFP-ZNF549-human HEK293 immortalized cell line michael-snyder ENCODE3 pending PE 101 HiSeq 4000 requires lab review ENCSR767XSF https://www.encodeproject.org/experiments/ENCSR767XSF "transcription factor,recombinant protein" eGFP-ZNF555-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF938OSW https://www.encodeproject.org/files/ENCFF938OSW/@@download/ENCFF938OSW.bam ENCFF145AAY https://www.encodeproject.org/files/ENCFF145AAY/@@download/ENCFF145AAY.bam 138.1 M 0 131.6 M 0.953 PE 101 101 native 57.0 M 0.0 M 49.3 M 0.713 0.86 0.86 7.22 215 1.03 3.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/03758f24-4389-4948-95e5-7579eb71545e/@@download/cross_correlation_plot/ENCFF531KERENCFF234NGI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB994FEU michael-snyder:HEK_eGFP-ZNF555_FRT_ChIP_L1 "ENCFF234NGI,ENCFF531KER" HiSeq 4000 2017-03-10T09:52:06.965130+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30k7900369KBPgY1zKVg8KF ENCSR767XSF https://www.encodeproject.org/experiments/ENCSR767XSF "transcription factor,recombinant protein" eGFP-ZNF555-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF547XPS https://www.encodeproject.org/files/ENCFF547XPS/@@download/ENCFF547XPS.bam ENCFF908LHA https://www.encodeproject.org/files/ENCFF908LHA/@@download/ENCFF908LHA.bam 94.1 M 0 82.2 M 0.873 PE 101 101 native 35.2 M 0.0 M 29.2 M 0.621 0.83 0.83 5.78 215 1.05 4.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7383ebd-07bf-4ace-9617-4ce5a987e851/@@download/cross_correlation_plot/ENCFF315FTBENCFF863GPM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB150DNH michael-snyder:HEK_eGFP-ZNF555_FRT_ChIP_L2 "ENCFF315FTB,ENCFF863GPM" HiSeq 4000 2017-03-10T09:48:31.410922+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30k7Qj03697BgGq9z2088Gx ENCSR447ZTA https://www.encodeproject.org/experiments/ENCSR447ZTA "recombinant protein,transcription factor" eGFP-ZNF558-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF186YMP https://www.encodeproject.org/files/ENCFF186YMP/@@download/ENCFF186YMP.bam ENCFF627MEX https://www.encodeproject.org/files/ENCFF627MEX/@@download/ENCFF627MEX.bam 63.2 M 0 59.2 M 0.937 PE 101 101 native 25.9 M 0.0 M 24.9 M 0.789 0.96 0.96 27.00 210 1.08 2.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/a65139db-6602-4913-9c3f-b2da01ca6227/@@download/cross_correlation_plot/ENCFF632OUFENCFF762MHK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB892LYN michael-snyder:HEK_eGFP-ZNF558_FRT_ChIP_L1 "ENCFF632OUF,ENCFF762MHK" HiSeq 2000 2016-09-14T19:19:30.874196+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9B6Q03692xk39gZV1443Y ENCSR447ZTA https://www.encodeproject.org/experiments/ENCSR447ZTA "recombinant protein,transcription factor" eGFP-ZNF558-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF458TQM https://www.encodeproject.org/files/ENCFF458TQM/@@download/ENCFF458TQM.bam ENCFF067VAZ https://www.encodeproject.org/files/ENCFF067VAZ/@@download/ENCFF067VAZ.bam 51.2 M 0 48.6 M 0.950 PE 101 101 native 21.6 M 0.0 M 20.8 M 0.812 0.96 0.96 27.25 215 1.10 2.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/b470b898-66b7-4e65-ba8a-8a1ebd89a979/@@download/cross_correlation_plot/ENCFF382AAJENCFF991FZE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB592VSV michael-snyder:HEK_eGFP-ZNF558_FRT_ChIP_L2 "ENCFF991FZE,ENCFF382AAJ" HiSeq 2000 2016-09-14T19:18:31.869829+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9BBj0369F1Xf4jx84ZFPv ENCSR538RDA https://www.encodeproject.org/experiments/ENCSR538RDA "recombinant protein,transcription factor" eGFP-ZNF560-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF393EHE https://www.encodeproject.org/files/ENCFF393EHE/@@download/ENCFF393EHE.bam ENCFF823NJA https://www.encodeproject.org/files/ENCFF823NJA/@@download/ENCFF823NJA.bam 64.8 M 0 63.0 M 0.972 PE 101 101 native 27.5 M 0.0 M 27.3 M 0.842 0.99 0.99 101.53 205 1.06 4.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/1183bdac-771e-4337-8e4b-ec1645eb95a3/@@download/cross_correlation_plot/ENCFF901AELENCFF181KEE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB179DKW michael-snyder:HEK_eGFP-ZNF560_FRT_ChIP_L2 "ENCFF181KEE,ENCFF901AEL" HiSeq 2000 2016-09-14T19:19:02.702867+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9ByQ0369JPg0Xjj75v43k ENCSR538RDA https://www.encodeproject.org/experiments/ENCSR538RDA "recombinant protein,transcription factor" eGFP-ZNF560-human HEK293 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF089XRF https://www.encodeproject.org/files/ENCFF089XRF/@@download/ENCFF089XRF.bam ENCFF489GWN https://www.encodeproject.org/files/ENCFF489GWN/@@download/ENCFF489GWN.bam 74.1 M 0 70.2 M 0.947 PE 101 101 native 30.7 M 0.0 M 29.5 M 0.798 0.96 0.96 27.29 180 1.06 3.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/00c8c119-8276-458d-a2ea-5a452684fbcd/@@download/cross_correlation_plot/ENCFF075NLIENCFF705CNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB501XPF michael-snyder:HEK_eGFP-ZNF560_FRT_ChIP_L3 "ENCFF705CNE,ENCFF075NLI" HiSeq 2000 2017-03-09T17:46:25.029057+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F307VxQ0369F7kgj1z24Bv3k ENCSR421QXA https://www.encodeproject.org/experiments/ENCSR421QXA "transcription factor,recombinant protein" eGFP-ZNF571-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF714MNN https://www.encodeproject.org/files/ENCFF714MNN/@@download/ENCFF714MNN.bam ENCFF219SYV https://www.encodeproject.org/files/ENCFF219SYV/@@download/ENCFF219SYV.bam 85.5 M 0 83.1 M 0.971 PE 101 101 native 35.6 M 0.0 M 33.9 M 0.792 0.95 0.95 20.07 215 1.05 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9a350c8-098d-4b04-b211-3e9a83ac810a/@@download/cross_correlation_plot/ENCFF226BLNENCFF145UNV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB553JTJ michael-snyder:HEK_eGFP-ZNF571_FRT_ChIP_L1 "ENCFF145UNV,ENCFF226BLN" HiSeq 4000 2017-02-16T07:03:30.805588+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X99vQ03694KQ1X3PV7Bgbp ENCSR421QXA https://www.encodeproject.org/experiments/ENCSR421QXA "transcription factor,recombinant protein" eGFP-ZNF571-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF078CGH https://www.encodeproject.org/files/ENCFF078CGH/@@download/ENCFF078CGH.bam ENCFF828GFO https://www.encodeproject.org/files/ENCFF828GFO/@@download/ENCFF828GFO.bam 87.8 M 0 85.2 M 0.970 PE 101 101 native 36.4 M 0.0 M 34.1 M 0.777 0.94 0.94 16.01 210 1.05 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0a91545-a1c8-4065-96d4-2a2db6e182e9/@@download/cross_correlation_plot/ENCFF256EWCENCFF198ANZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB769NKB michael-snyder:HEK_eGFP-ZNF571_FRT_ChIP_L2 "ENCFF198ANZ,ENCFF256EWC" HiSeq 4000 2017-02-16T07:03:40.042683+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X9B4Q03695xXvG3Q1QPP72 ENCSR668HOP https://www.encodeproject.org/experiments/ENCSR668HOP "recombinant protein,transcription factor" eGFP-ZNF580-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF369ANP https://www.encodeproject.org/files/ENCFF369ANP/@@download/ENCFF369ANP.bam ENCFF699RNG https://www.encodeproject.org/files/ENCFF699RNG/@@download/ENCFF699RNG.bam 62.1 M 0 59.9 M 0.966 PE 101 101 native 25.8 M 0.0 M 25.5 M 0.823 0.99 0.99 110.93 200 1.09 2.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5a237ea-0760-411c-83c7-1095dbfda253/@@download/cross_correlation_plot/ENCFF853ZLCENCFF952WBI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB872GDP michael-snyder:HEK_eGFP-ZNF580_FRT_ChIP_L1 "ENCFF853ZLC,ENCFF952WBI" HiSeq 2000 2016-09-14T19:15:48.145888+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9zgj0369PBbP1x1p950JQ ENCSR668HOP https://www.encodeproject.org/experiments/ENCSR668HOP "recombinant protein,transcription factor" eGFP-ZNF580-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF892ULP https://www.encodeproject.org/files/ENCFF892ULP/@@download/ENCFF892ULP.bam ENCFF971BTB https://www.encodeproject.org/files/ENCFF971BTB/@@download/ENCFF971BTB.bam 58.0 M 0 55.8 M 0.963 PE 101 101 native 24.0 M 0.0 M 23.8 M 0.819 0.99 0.99 88.78 200 1.10 2.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/c16407e0-93e2-4dea-81d4-5e07c5fefc28/@@download/cross_correlation_plot/ENCFF919KADENCFF853FHN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB359TMF michael-snyder:HEK_eGFP-ZNF580_FRT_ChIP_L2 "ENCFF853FHN,ENCFF919KAD" HiSeq 2000 2016-09-14T19:13:28.014964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9zv0036973J1BzVpJ4jVf ENCSR011XCI https://www.encodeproject.org/experiments/ENCSR011XCI "transcription factor,recombinant protein" eGFP-ZNF585B-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF193RNU https://www.encodeproject.org/files/ENCFF193RNU/@@download/ENCFF193RNU.bam ENCFF472DFD https://www.encodeproject.org/files/ENCFF472DFD/@@download/ENCFF472DFD.bam 67.7 M 0 65.8 M 0.972 PE 101 101 native 28.9 M 0.0 M 28.4 M 0.840 0.99 0.99 67.54 210 1.10 2.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7b9d90c-251d-4d15-910c-1e70affd5639/@@download/cross_correlation_plot/ENCFF849AAGENCFF549LFN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB850YXH michael-snyder:HEK_eGFP-ZNF585B_FRT_ChIP_L1 "ENCFF549LFN,ENCFF849AAG" HiSeq 2000 2016-09-14T19:21:09.553169+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG95x80369J6bkz8ZJ7qf00 ENCSR011XCI https://www.encodeproject.org/experiments/ENCSR011XCI "transcription factor,recombinant protein" eGFP-ZNF585B-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF892HUN https://www.encodeproject.org/files/ENCFF892HUN/@@download/ENCFF892HUN.bam ENCFF654RNE https://www.encodeproject.org/files/ENCFF654RNE/@@download/ENCFF654RNE.bam 70.1 M 0 67.8 M 0.967 PE 101 101 native 29.6 M 0.0 M 29.4 M 0.839 0.99 0.99 161.48 195 1.08 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/a79d5dbe-0e7e-48ea-9754-d7e7833c8fbb/@@download/cross_correlation_plot/ENCFF658VPOENCFF293QLJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB357BRZ michael-snyder:HEK_eGFP-ZNF585B_FRT_ChIP_L2 "ENCFF293QLJ,ENCFF658VPO" HiSeq 2000 2016-09-14T19:21:03.165442+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9618036994Jx4PVBXK9zG ENCSR017QBI https://www.encodeproject.org/experiments/ENCSR017QBI "recombinant protein,transcription factor" eGFP-ZNF600-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF687TGC https://www.encodeproject.org/files/ENCFF687TGC/@@download/ENCFF687TGC.bam ENCFF707ROC https://www.encodeproject.org/files/ENCFF707ROC/@@download/ENCFF707ROC.bam 72.3 M 0 70.1 M 0.970 PE 101 101 native 31.0 M 0.0 M 30.8 M 0.852 1.00 1.00 200.88 230 1.12 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2ec9c0e-4434-4779-a85e-6819de1c58b8/@@download/cross_correlation_plot/ENCFF004IXEENCFF488GZC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB883JER michael-snyder:HEK_eGFP-ZNF600_FRT_ChIP_L1 "ENCFF488GZC,ENCFF004IXE" HiSeq 2000 2016-09-14T19:27:32.075921+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8v7j0369JP9931xpgP8xQ ENCSR017QBI https://www.encodeproject.org/experiments/ENCSR017QBI "recombinant protein,transcription factor" eGFP-ZNF600-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF205IQB https://www.encodeproject.org/files/ENCFF205IQB/@@download/ENCFF205IQB.bam ENCFF221TDT https://www.encodeproject.org/files/ENCFF221TDT/@@download/ENCFF221TDT.bam 83.3 M 0 80.5 M 0.965 PE 101 101 native 35.5 M 0.0 M 35.2 M 0.846 0.99 0.99 135.34 220 1.12 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/46657eb8-fb7c-4006-8112-5245e9c0b5f9/@@download/cross_correlation_plot/ENCFF238CVLENCFF964ENU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB321XJI michael-snyder:HEK_eGFP-ZNF600_FRT_ChIP_L2 "ENCFF964ENU,ENCFF238CVL" HiSeq 2000 2016-09-14T19:28:23.630099+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8vG00369JP9931xpgP8xp ENCSR691TXI https://www.encodeproject.org/experiments/ENCSR691TXI "recombinant protein,transcription factor" eGFP-ZNF610-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF522UYX https://www.encodeproject.org/files/ENCFF522UYX/@@download/ENCFF522UYX.bam ENCFF333APH https://www.encodeproject.org/files/ENCFF333APH/@@download/ENCFF333APH.bam 75.2 M 0 73.0 M 0.971 PE 101 101 native 32.1 M 0.0 M 31.1 M 0.828 0.97 0.97 34.61 220 1.07 2.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/27a4d248-a240-42ae-a7f0-b5dd72fced0d/@@download/cross_correlation_plot/ENCFF333HZBENCFF564WFC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB017RUH michael-snyder:HEK_eGFP-ZNF610_FRT_ChIP_L1 "ENCFF564WFC,ENCFF333HZB" HiSeq 2000 2016-09-14T19:23:34.862823+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG91K8036994Jx4PVBXK9xk ENCSR691TXI https://www.encodeproject.org/experiments/ENCSR691TXI "recombinant protein,transcription factor" eGFP-ZNF610-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF721QYO https://www.encodeproject.org/files/ENCFF721QYO/@@download/ENCFF721QYO.bam ENCFF472QFG https://www.encodeproject.org/files/ENCFF472QFG/@@download/ENCFF472QFG.bam 57.1 M 0 54.9 M 0.963 PE 101 101 native 24.0 M 0.0 M 23.5 M 0.823 0.98 0.98 44.74 215 1.07 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7c06e2d-b4fc-4b26-8168-3cc560faa372/@@download/cross_correlation_plot/ENCFF911HHRENCFF316GJN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB937WWI michael-snyder:HEK_eGFP-ZNF610_FRT_ChIP_L2 "ENCFF316GJN,ENCFF911HHR" HiSeq 2000 2016-09-14T19:22:23.502374+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG91X803693JZG3y9p8vzfX ENCSR858FAN https://www.encodeproject.org/experiments/ENCSR858FAN "transcription factor,recombinant protein" eGFP-ZNF621-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF349STY https://www.encodeproject.org/files/ENCFF349STY/@@download/ENCFF349STY.bam ENCFF399KTL https://www.encodeproject.org/files/ENCFF399KTL/@@download/ENCFF399KTL.bam 91.8 M 0 89.2 M 0.972 PE 101 101 native 38.2 M 0.0 M 35.6 M 0.775 0.93 0.93 14.22 205 1.05 3.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f7220cd-2ecf-4dd4-ace8-252d1f287692/@@download/cross_correlation_plot/ENCFF551AQHENCFF363NAP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB254VDF michael-snyder:HEK_eGFP-ZNF621_FRT_ChIP_L1 "ENCFF363NAP,ENCFF551AQH" HiSeq 4000 2017-02-14T17:37:56.026791+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0fk003692zGb642zVbJbk ENCSR858FAN https://www.encodeproject.org/experiments/ENCSR858FAN "transcription factor,recombinant protein" eGFP-ZNF621-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF479RUX https://www.encodeproject.org/files/ENCFF479RUX/@@download/ENCFF479RUX.bam ENCFF619EQB https://www.encodeproject.org/files/ENCFF619EQB/@@download/ENCFF619EQB.bam 97.4 M 0 94.6 M 0.971 PE 101 101 native 40.4 M 0.0 M 37.2 M 0.763 0.92 0.92 12.21 205 1.05 3.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/b435d178-f36b-454e-b5e1-fd83ec307017/@@download/cross_correlation_plot/ENCFF750PYCENCFF443JDD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB156IKK michael-snyder:HEK_eGFP-ZNF621_FRT_ChIP_L2 "ENCFF443JDD,ENCFF750PYC" HiSeq 4000 2017-02-14T17:38:04.395570+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0g0003694KQ1X3PV7BFPJ ENCSR022IZK https://www.encodeproject.org/experiments/ENCSR022IZK "recombinant protein,transcription factor" eGFP-ZNF623-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF893VEW https://www.encodeproject.org/files/ENCFF893VEW/@@download/ENCFF893VEW.bam ENCFF058FMP https://www.encodeproject.org/files/ENCFF058FMP/@@download/ENCFF058FMP.bam 62.6 M 0 59.8 M 0.956 PE 101 101 native 26.1 M 0.0 M 25.3 M 0.810 0.97 0.97 34.68 225 1.14 2.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/3594232b-401d-4e71-9609-af90048d866a/@@download/cross_correlation_plot/ENCFF735ESZENCFF585TRE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB652XZN michael-snyder:HEK_eGFP-ZNF623_FRT_ChIP_L1 "ENCFF585TRE,ENCFF735ESZ" HiSeq 2000 2016-09-14T19:23:02.061981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8j7003698Xg7B7xb4pbqg ENCSR022IZK https://www.encodeproject.org/experiments/ENCSR022IZK "recombinant protein,transcription factor" eGFP-ZNF623-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF780ZCG https://www.encodeproject.org/files/ENCFF780ZCG/@@download/ENCFF780ZCG.bam ENCFF441IVF https://www.encodeproject.org/files/ENCFF441IVF/@@download/ENCFF441IVF.bam 59.0 M 0 55.8 M 0.947 PE 101 101 native 24.4 M 0.0 M 23.5 M 0.798 0.97 0.97 28.69 215 1.14 2.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2e8aa59-9915-4390-b3b5-5360759ea984/@@download/cross_correlation_plot/ENCFF327EZTENCFF534JQE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB115CML michael-snyder:HEK_eGFP-ZNF623_FRT_ChIP_L2 "ENCFF534JQE,ENCFF327EZT" HiSeq 2000 2016-09-14T19:23:23.150928+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8jG0036994Jx4PVBXK9jG ENCSR878DES https://www.encodeproject.org/experiments/ENCSR878DES "recombinant protein,transcription factor" eGFP-ZNF624-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF848TYC https://www.encodeproject.org/files/ENCFF848TYC/@@download/ENCFF848TYC.bam ENCFF437JTR https://www.encodeproject.org/files/ENCFF437JTR/@@download/ENCFF437JTR.bam 72.5 M 0 71.1 M 0.982 PE 101 101 native 31.3 M 0.0 M 31.0 M 0.856 0.99 0.99 103.00 210 1.05 4.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/7031175b-a71d-428d-a610-582e565ec1bc/@@download/cross_correlation_plot/ENCFF676BSDENCFF196AWV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB967WER michael-snyder:HEK_eGFP-ZNF624_FRT_ChIP_L1 "ENCFF676BSD,ENCFF196AWV" HiSeq 2000 2017-03-04T18:24:03.055204+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv59Q036920Fb581yVKg7k ENCSR878DES https://www.encodeproject.org/experiments/ENCSR878DES "recombinant protein,transcription factor" eGFP-ZNF624-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF031RFG https://www.encodeproject.org/files/ENCFF031RFG/@@download/ENCFF031RFG.bam ENCFF101ZLH https://www.encodeproject.org/files/ENCFF101ZLH/@@download/ENCFF101ZLH.bam 59.9 M 0 58.8 M 0.982 PE 101 101 native 26.0 M 0.0 M 25.5 M 0.852 0.98 0.98 57.51 200 1.06 4.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/91ac2048-16ef-466e-a05c-c2037cbe3ee9/@@download/cross_correlation_plot/ENCFF638IWTENCFF205WLT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB051TDS michael-snyder:HEK_eGFP-ZNF624_FRT_ChIP_L2 "ENCFF205WLT,ENCFF638IWT" HiSeq 2000 2017-03-04T18:22:34.193941+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv5p80369PB1Z73f604zGx ENCSR351NON https://www.encodeproject.org/experiments/ENCSR351NON "recombinant protein,transcription factor" eGFP-ZNF629-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF423OJU https://www.encodeproject.org/files/ENCFF423OJU/@@download/ENCFF423OJU.bam ENCFF986IPG https://www.encodeproject.org/files/ENCFF986IPG/@@download/ENCFF986IPG.bam 65.4 M 0 62.6 M 0.957 PE 101 101 native 27.7 M 0.0 M 26.9 M 0.822 0.97 0.97 36.47 220 1.27 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/1df04b97-98d3-4180-9433-466a88333971/@@download/cross_correlation_plot/ENCFF701LQTENCFF956FQW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB853TJS michael-snyder:HEK_eGFP-ZNF629_FRT_ChIP_L2 "ENCFF956FQW,ENCFF701LQT" HiSeq 2000 2016-09-14T19:19:48.212314+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3XqX4003699064BJpQ9YG2J ENCSR351NON https://www.encodeproject.org/experiments/ENCSR351NON "recombinant protein,transcription factor" eGFP-ZNF629-human HEK293 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF970NDQ https://www.encodeproject.org/files/ENCFF970NDQ/@@download/ENCFF970NDQ.bam ENCFF263SNQ https://www.encodeproject.org/files/ENCFF263SNQ/@@download/ENCFF263SNQ.bam 63.3 M 0 60.2 M 0.951 PE 101 101 native 26.6 M 0.0 M 25.6 M 0.808 0.96 0.96 25.61 225 1.26 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e896fef-b31f-48c2-8191-8e1fb1269598/@@download/cross_correlation_plot/ENCFF920JRGENCFF128QVX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB836KZJ michael-snyder:HEK_eGFP-ZNF629_FRT_ChIP_L3 "ENCFF128QVX,ENCFF920JRG" HiSeq 2000 2017-04-06T20:42:07.355861+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3XqX8003692X559Jkg3xJZX ENCSR080CST https://www.encodeproject.org/experiments/ENCSR080CST "recombinant protein,transcription factor" eGFP-ZNF639-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF246DMM https://www.encodeproject.org/files/ENCFF246DMM/@@download/ENCFF246DMM.bam ENCFF084PBY https://www.encodeproject.org/files/ENCFF084PBY/@@download/ENCFF084PBY.bam 52.4 M 0 50.7 M 0.969 PE 101 101 native 22.2 M 0.0 M 21.8 M 0.834 0.98 0.98 63.59 210 1.09 2.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/3815eec6-da83-46e6-a634-0dfec8114687/@@download/cross_correlation_plot/ENCFF317VCZENCFF830YAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB227OBL michael-snyder:HEK_eGFP-ZNF639_FRT_ChIP_L1 "ENCFF830YAY,ENCFF317VCZ" HiSeq 2000 2016-09-14T19:36:32.951719+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9j7003690qG5Zzk849y2k ENCSR080CST https://www.encodeproject.org/experiments/ENCSR080CST "recombinant protein,transcription factor" eGFP-ZNF639-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF803XTQ https://www.encodeproject.org/files/ENCFF803XTQ/@@download/ENCFF803XTQ.bam ENCFF530XGH https://www.encodeproject.org/files/ENCFF530XGH/@@download/ENCFF530XGH.bam 60.0 M 0 58.5 M 0.975 PE 101 101 native 25.7 M 0.0 M 25.1 M 0.838 0.98 0.98 46.06 210 1.08 3.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/5606a1f5-34c9-494b-b9d5-b996ab086273/@@download/cross_correlation_plot/ENCFF664BVYENCFF438IPE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB597LTS michael-snyder:HEK_eGFP-ZNF639_FRT_ChIP_L2 "ENCFF664BVY,ENCFF438IPE" HiSeq 2000 2016-09-14T19:37:26.930595+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9jF00369GX4Qp1Gv13gXb ENCSR776LDJ https://www.encodeproject.org/experiments/ENCSR776LDJ "transcription factor,recombinant protein" eGFP-ZNF645-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF273KRY https://www.encodeproject.org/files/ENCFF273KRY/@@download/ENCFF273KRY.bam ENCFF206DGM https://www.encodeproject.org/files/ENCFF206DGM/@@download/ENCFF206DGM.bam 72.9 M 0 70.0 M 0.960 PE 101 101 native 30.6 M 0.0 M 30.1 M 0.827 0.99 0.99 70.45 215 1.05 3.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/273d1620-a8bd-4354-86b0-d6bcc5fced1c/@@download/cross_correlation_plot/ENCFF457HZHENCFF169DJA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB100FTS michael-snyder:HEK_eGFP-ZNF645_FRT_ChIP_L1 "ENCFF457HZH,ENCFF169DJA" HiSeq 2000 2016-12-15T06:13:12.466371+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qB380369P8qVgK8XbYy66 ENCSR776LDJ https://www.encodeproject.org/experiments/ENCSR776LDJ "transcription factor,recombinant protein" eGFP-ZNF645-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF345ZQZ https://www.encodeproject.org/files/ENCFF345ZQZ/@@download/ENCFF345ZQZ.bam ENCFF954INV https://www.encodeproject.org/files/ENCFF954INV/@@download/ENCFF954INV.bam 68.7 M 0 66.0 M 0.961 PE 101 101 native 28.9 M 0.0 M 28.5 M 0.829 0.98 0.98 63.55 205 1.06 4.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/09e4aefa-89d3-40af-9c82-84e4ca7a892c/@@download/cross_correlation_plot/ENCFF728AOVENCFF098DZH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB307AAG michael-snyder:HEK_eGFP-ZNF645_FRT_ChIP_L2 "ENCFF728AOV,ENCFF098DZH" HiSeq 2000 2016-12-15T06:13:16.762064+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFX803696vv3xJBbkJ9F1 ENCSR504VDV https://www.encodeproject.org/experiments/ENCSR504VDV "recombinant protein,transcription factor" eGFP-ZNF654-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF221VRH https://www.encodeproject.org/files/ENCFF221VRH/@@download/ENCFF221VRH.bam ENCFF422OPY https://www.encodeproject.org/files/ENCFF422OPY/@@download/ENCFF422OPY.bam 52.1 M 0 47.3 M 0.907 PE 101 101 native 20.8 M 0.0 M 19.1 M 0.734 0.92 0.92 12.07 185 1.31 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/b15a686c-c975-42df-8d34-8ead24a38d32/@@download/cross_correlation_plot/ENCFF549SRVENCFF406DCD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB160CCG michael-snyder:HEK_eGFP-ZNF654_FRT_ChIP_L1 "ENCFF406DCD,ENCFF549SRV" HiSeq 2000 2016-09-14T19:27:21.129934+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9KK80369PBkYfgj4Z3Zzp ENCSR504VDV https://www.encodeproject.org/experiments/ENCSR504VDV "recombinant protein,transcription factor" eGFP-ZNF654-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF404VMP https://www.encodeproject.org/files/ENCFF404VMP/@@download/ENCFF404VMP.bam ENCFF515QKN https://www.encodeproject.org/files/ENCFF515QKN/@@download/ENCFF515QKN.bam 46.4 M 0 42.3 M 0.912 PE 101 101 native 18.7 M 0.0 M 17.1 M 0.737 0.91 0.91 11.43 190 1.33 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/3bbc067e-c489-4db8-aade-acc4b08df8ab/@@download/cross_correlation_plot/ENCFF774IKEENCFF333NBD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB871JCN michael-snyder:HEK_eGFP-ZNF654_FRT_ChIP_L2 "ENCFF774IKE,ENCFF333NBD" HiSeq 2000 2016-09-14T19:26:31.824370+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9KX80369B1pgXbv4QFgQK ENCSR762DQP https://www.encodeproject.org/experiments/ENCSR762DQP "transcription factor,recombinant protein" eGFP-ZNF658-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF080PMW https://www.encodeproject.org/files/ENCFF080PMW/@@download/ENCFF080PMW.bam ENCFF763ECS https://www.encodeproject.org/files/ENCFF763ECS/@@download/ENCFF763ECS.bam 67.9 M 0 65.2 M 0.959 PE 101 101 native 28.2 M 0.0 M 27.9 M 0.821 0.99 0.99 85.93 220 1.05 4.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/08da024f-03c0-496e-b964-260ef7d4f439/@@download/cross_correlation_plot/ENCFF561LORENCFF441WDI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB006IHQ michael-snyder:HEK_eGFP-ZNF658_FRT_ChIP_L1 "ENCFF561LOR,ENCFF441WDI" HiSeq 2000 2016-12-15T06:14:01.206769+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qB5j0369FGK86Fk16zx5z ENCSR762DQP https://www.encodeproject.org/experiments/ENCSR762DQP "transcription factor,recombinant protein" eGFP-ZNF658-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF504ARY https://www.encodeproject.org/files/ENCFF504ARY/@@download/ENCFF504ARY.bam ENCFF402WHT https://www.encodeproject.org/files/ENCFF402WHT/@@download/ENCFF402WHT.bam 49.9 M 0 47.1 M 0.944 PE 101 101 native 20.4 M 0.0 M 20.2 M 0.810 0.99 0.99 83.84 210 1.07 3.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/70a9d891-20c5-40dd-b7fd-3bff0548c0c0/@@download/cross_correlation_plot/ENCFF331OECENCFF796LKB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB151WGR michael-snyder:HEK_eGFP-ZNF658_FRT_ChIP_L2 "ENCFF331OEC,ENCFF796LKB" HiSeq 2000 2016-12-15T02:32:51.738071+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFz80369FGk256Vf7Y8zy ENCSR483VJQ https://www.encodeproject.org/experiments/ENCSR483VJQ "transcription factor,recombinant protein" eGFP-ZNF662-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF746REA https://www.encodeproject.org/files/ENCFF746REA/@@download/ENCFF746REA.bam ENCFF871ASE https://www.encodeproject.org/files/ENCFF871ASE/@@download/ENCFF871ASE.bam 73.6 M 0 71.5 M 0.971 PE 101 101 native 30.4 M 0.0 M 28.5 M 0.775 0.94 0.94 15.61 210 1.05 5.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9353bc9-9c86-45be-973a-a71dd0128773/@@download/cross_correlation_plot/ENCFF410PMBENCFF830DDU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB713QRB michael-snyder:HEK_eGFP-ZNF662_FRT_ChIP_L1 "ENCFF830DDU,ENCFF410PMB" HiSeq 4000 2017-02-16T07:02:31.638964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X998Q03697G7486J91byJ7 ENCSR483VJQ https://www.encodeproject.org/experiments/ENCSR483VJQ "transcription factor,recombinant protein" eGFP-ZNF662-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF540WIL https://www.encodeproject.org/files/ENCFF540WIL/@@download/ENCFF540WIL.bam ENCFF132FMN https://www.encodeproject.org/files/ENCFF132FMN/@@download/ENCFF132FMN.bam 96.1 M 0 93.6 M 0.974 PE 101 101 native 40.4 M 0.0 M 37.2 M 0.774 0.92 0.92 12.09 200 1.05 3.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1998126-9c07-4c45-846c-a9aadb0f715b/@@download/cross_correlation_plot/ENCFF857UFPENCFF024CHD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB893SPH michael-snyder:HEK_eGFP-ZNF662_FRT_ChIP_L2 "ENCFF024CHD,ENCFF857UFP" HiSeq 4000 2017-02-16T07:05:46.196322+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X99Z00369Fjp343Q7bQ00P ENCSR714LZQ https://www.encodeproject.org/experiments/ENCSR714LZQ "recombinant protein,transcription factor" eGFP-ZNF664-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF207QWX https://www.encodeproject.org/files/ENCFF207QWX/@@download/ENCFF207QWX.bam ENCFF202YYL https://www.encodeproject.org/files/ENCFF202YYL/@@download/ENCFF202YYL.bam 53.0 M 0 51.8 M 0.977 PE 101 101 native 22.5 M 0.0 M 22.1 M 0.835 0.98 0.98 62.84 205 1.09 2.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d81e2e3-8944-40d0-95b2-56b00b4ed775/@@download/cross_correlation_plot/ENCFF208FLCENCFF593NUK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB906EHV michael-snyder:HEK_eGFP-ZNF664_FRT_ChIP_L1 "ENCFF593NUK,ENCFF208FLC" HiSeq 2000 2016-09-14T19:21:46.295581+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9F3003691jV3BQb6PVp5J ENCSR714LZQ https://www.encodeproject.org/experiments/ENCSR714LZQ "recombinant protein,transcription factor" eGFP-ZNF664-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF740JFH https://www.encodeproject.org/files/ENCFF740JFH/@@download/ENCFF740JFH.bam ENCFF965LNU https://www.encodeproject.org/files/ENCFF965LNU/@@download/ENCFF965LNU.bam 67.5 M 0 65.5 M 0.971 PE 101 101 native 28.5 M 0.0 M 28.2 M 0.836 0.99 0.99 112.55 205 1.08 2.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/b12d8f4b-6867-497a-b21b-2e7c1f40c7aa/@@download/cross_correlation_plot/ENCFF176BPBENCFF039IGX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB398ZRQ michael-snyder:HEK_eGFP-ZNF664_FRT_ChIP_L2 "ENCFF176BPB,ENCFF039IGX" HiSeq 2000 2016-09-14T19:22:24.856510+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9F780369Fb155KvKKzQV7 ENCSR233MWH https://www.encodeproject.org/experiments/ENCSR233MWH "recombinant protein,transcription factor" eGFP-ZNF670-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF409ETZ https://www.encodeproject.org/files/ENCFF409ETZ/@@download/ENCFF409ETZ.bam ENCFF063ZKX https://www.encodeproject.org/files/ENCFF063ZKX/@@download/ENCFF063ZKX.bam 43.0 M 0 41.9 M 0.975 PE 101 101 native 18.4 M 0.0 M 18.2 M 0.845 0.99 0.99 100.40 200 1.08 3.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/07002844-412b-4d1f-b9e6-688588b2e04b/@@download/cross_correlation_plot/ENCFF593YWJENCFF468WIR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB643TBI michael-snyder:HEK_eGFP-ZNF670_FRT_ChIP_L2 "ENCFF593YWJ,ENCFF468WIR" HiSeq 2000 2016-12-15T02:12:31.308292+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFfj036974yqx29x5Z60p ENCSR233MWH https://www.encodeproject.org/experiments/ENCSR233MWH "recombinant protein,transcription factor" eGFP-ZNF670-human HEK293 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF393EZW https://www.encodeproject.org/files/ENCFF393EZW/@@download/ENCFF393EZW.bam ENCFF393FCL https://www.encodeproject.org/files/ENCFF393FCL/@@download/ENCFF393FCL.bam 60.2 M 0 58.8 M 0.977 PE 101 101 native 25.8 M 0.0 M 25.4 M 0.844 0.98 0.99 66.77 200 1.06 4.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/89d666b7-c130-4860-8db8-88bab174b9df/@@download/cross_correlation_plot/ENCFF377KMZENCFF608LSC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB110VUQ michael-snyder:HEK_eGFP-ZNF670_FRT_ChIP_L3 "ENCFF608LSC,ENCFF377KMZ" HiSeq 2000 2016-12-15T03:47:13.644608+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJJj03696vv3xJBbkJ9KX ENCSR307CKC https://www.encodeproject.org/experiments/ENCSR307CKC "recombinant protein,transcription factor" eGFP-ZNF680-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF353RVO https://www.encodeproject.org/files/ENCFF353RVO/@@download/ENCFF353RVO.bam ENCFF531MJW https://www.encodeproject.org/files/ENCFF531MJW/@@download/ENCFF531MJW.bam 67.3 M 0 64.0 M 0.951 PE 101 101 native 27.8 M 0.0 M 27.5 M 0.818 0.99 0.99 97.62 205 1.07 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/1651cd18-f583-4b73-9685-716fb5caba3e/@@download/cross_correlation_plot/ENCFF706OYXENCFF754UWT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB634EGE michael-snyder:HEK_eGFP-ZNF680_FRT_ChIP_L1 "ENCFF706OYX,ENCFF754UWT" HiSeq 2000 2016-09-14T19:19:30.199159+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG966803691jV3BQb6PVp41 ENCSR307CKC https://www.encodeproject.org/experiments/ENCSR307CKC "recombinant protein,transcription factor" eGFP-ZNF680-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF342AFE https://www.encodeproject.org/files/ENCFF342AFE/@@download/ENCFF342AFE.bam ENCFF248PTH https://www.encodeproject.org/files/ENCFF248PTH/@@download/ENCFF248PTH.bam 60.1 M 0 57.9 M 0.964 PE 101 101 native 25.2 M 0.0 M 25.0 M 0.831 0.99 0.99 97.34 210 1.08 2.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6889f16-0e14-4f6a-b8b4-e36904db3c5c/@@download/cross_correlation_plot/ENCFF292AJWENCFF513JDU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB997CQT michael-snyder:HEK_eGFP-ZNF680_FRT_ChIP_L2 "ENCFF513JDU,ENCFF292AJW" HiSeq 2000 2016-09-14T19:21:10.678593+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG96BQ0369J6bkz8ZJ7qf0B ENCSR418MKG https://www.encodeproject.org/experiments/ENCSR418MKG "recombinant protein,transcription factor" eGFP-ZNF692-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF766CMW https://www.encodeproject.org/files/ENCFF766CMW/@@download/ENCFF766CMW.bam ENCFF594BJW https://www.encodeproject.org/files/ENCFF594BJW/@@download/ENCFF594BJW.bam 62.7 M 0 60.5 M 0.964 PE 101 101 native 26.8 M 0.0 M 26.5 M 0.845 0.99 0.99 98.87 215 1.15 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d020f63-eb32-4e8f-a669-8ff3a7f88d98/@@download/cross_correlation_plot/ENCFF916UAHENCFF988TNQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB691YKT michael-snyder:HEK_eGFP-ZNF692_FRT_ChIP_L1 "ENCFF988TNQ,ENCFF916UAH" HiSeq 2000 2016-09-14T19:34:44.969112+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9kyQ0369B1pgXbv4QFgb1 ENCSR418MKG https://www.encodeproject.org/experiments/ENCSR418MKG "recombinant protein,transcription factor" eGFP-ZNF692-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF202NKF https://www.encodeproject.org/files/ENCFF202NKF/@@download/ENCFF202NKF.bam ENCFF339ZTR https://www.encodeproject.org/files/ENCFF339ZTR/@@download/ENCFF339ZTR.bam 70.7 M 0 67.9 M 0.960 PE 101 101 native 29.9 M 0.0 M 29.5 M 0.835 0.99 0.99 95.07 205 1.13 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/d99aa68d-01be-45fd-81d4-4bcdfbd9c85e/@@download/cross_correlation_plot/ENCFF017EARENCFF795EIH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB292XYX michael-snyder:HEK_eGFP-ZNF692_FRT_ChIP_L2 "ENCFF795EIH,ENCFF017EAR" HiSeq 2000 2016-09-14T19:31:34.841917+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9p3Q03696gGz8k04XPzG9 ENCSR217QCK https://www.encodeproject.org/experiments/ENCSR217QCK "recombinant protein,transcription factor" eGFP-ZNF697-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF344DOB https://www.encodeproject.org/files/ENCFF344DOB/@@download/ENCFF344DOB.bam ENCFF960PEV https://www.encodeproject.org/files/ENCFF960PEV/@@download/ENCFF960PEV.bam 40.4 M 0 36.7 M 0.908 PE 101 101 native 16.0 M 0.0 M 14.9 M 0.736 0.93 0.93 13.50 220 1.15 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb62a542-8425-4e5f-ba63-c380244a5881/@@download/cross_correlation_plot/ENCFF025PPVENCFF472OCU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB662BXB michael-snyder:HEK_eGFP-ZNF697_FRT_ChIP_L2 "ENCFF025PPV,ENCFF472OCU" HiSeq 2000 2016-09-14T19:26:40.035254+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Y4Q03690qG5Zzk849xy6 ENCSR217QCK https://www.encodeproject.org/experiments/ENCSR217QCK "recombinant protein,transcription factor" eGFP-ZNF697-human HEK293 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF366ZYM https://www.encodeproject.org/files/ENCFF366ZYM/@@download/ENCFF366ZYM.bam ENCFF176JFZ https://www.encodeproject.org/files/ENCFF176JFZ/@@download/ENCFF176JFZ.bam 47.3 M 0 44.3 M 0.937 PE 101 101 native 19.5 M 0.0 M 18.3 M 0.775 0.94 0.94 17.16 215 1.12 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/a418d009-b996-46e0-9537-381eb931a890/@@download/cross_correlation_plot/ENCFF278MPJENCFF959SZB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB933NVZ michael-snyder:HEK_eGFP-ZNF697_FRT_ChIP_L3 "ENCFF278MPJ,ENCFF959SZB" HiSeq 2000 2017-02-07T18:45:38.919545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GQvqQ03697ggyQFvzB0Vv3 ENCSR547TGL https://www.encodeproject.org/experiments/ENCSR547TGL "transcription factor,recombinant protein" eGFP-ZNF701-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF618RUK https://www.encodeproject.org/files/ENCFF618RUK/@@download/ENCFF618RUK.bam ENCFF957WUT https://www.encodeproject.org/files/ENCFF957WUT/@@download/ENCFF957WUT.bam 64.7 M 0 63.3 M 0.980 PE 101 101 native 27.9 M 0.0 M 27.5 M 0.851 0.99 0.99 77.25 210 1.05 4.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c6386c8-c04b-4471-8178-d942462c6459/@@download/cross_correlation_plot/ENCFF784RTYENCFF675CSM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB496TYX michael-snyder:HEK_eGFP-ZNF701_FRT_ChIP_L1 "ENCFF784RTY,ENCFF675CSM" HiSeq 2000 2016-12-15T03:49:55.415342+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBGj0369FGk256Vf7Y8qg ENCSR547TGL https://www.encodeproject.org/experiments/ENCSR547TGL "transcription factor,recombinant protein" eGFP-ZNF701-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF675DVT https://www.encodeproject.org/files/ENCFF675DVT/@@download/ENCFF675DVT.bam ENCFF698ZSW https://www.encodeproject.org/files/ENCFF698ZSW/@@download/ENCFF698ZSW.bam 62.1 M 0 60.9 M 0.981 PE 101 101 native 26.8 M 0.0 M 26.6 M 0.856 0.99 0.99 95.79 205 1.06 3.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4a6e520-7413-4e5c-849b-397320bcead3/@@download/cross_correlation_plot/ENCFF610KRGENCFF859PAK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB756PDF michael-snyder:HEK_eGFP-ZNF701_FRT_ChIP_L2 "ENCFF610KRG,ENCFF859PAK" HiSeq 2000 2016-12-15T03:57:26.279949+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFJ803691VQjVJByZkKYx ENCSR194KWL https://www.encodeproject.org/experiments/ENCSR194KWL "transcription factor,recombinant protein" eGFP-ZNF704-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF893IIV https://www.encodeproject.org/files/ENCFF893IIV/@@download/ENCFF893IIV.bam ENCFF666AGL https://www.encodeproject.org/files/ENCFF666AGL/@@download/ENCFF666AGL.bam 58.4 M 0 57.1 M 0.978 PE 101 101 native 25.1 M 0.0 M 24.5 M 0.840 0.98 0.98 44.79 205 1.06 4.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/7147cb89-a23c-40ef-a428-e91fa2d214c0/@@download/cross_correlation_plot/ENCFF939GNWENCFF044XFM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB744KZY michael-snyder:HEK_eGFP-ZNF704_FRT_ChIP_L1 "ENCFF939GNW,ENCFF044XFM" HiSeq 2000 2016-12-15T03:29:28.543545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFK003695ZjjX2BpbFB6f ENCSR194KWL https://www.encodeproject.org/experiments/ENCSR194KWL "transcription factor,recombinant protein" eGFP-ZNF704-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF125UKU https://www.encodeproject.org/files/ENCFF125UKU/@@download/ENCFF125UKU.bam ENCFF152TEE https://www.encodeproject.org/files/ENCFF152TEE/@@download/ENCFF152TEE.bam 56.5 M 0 55.3 M 0.979 PE 101 101 native 24.4 M 0.0 M 23.9 M 0.844 0.98 0.98 46.30 205 1.06 4.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8367b29-71a8-4c07-8fb9-32f54217722b/@@download/cross_correlation_plot/ENCFF528YMCENCFF097PYZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB589ZPX michael-snyder:HEK_eGFP-ZNF704_FRT_ChIP_L2 "ENCFF528YMC,ENCFF097PYZ" HiSeq 2000 2016-12-15T03:38:20.274022+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJ980369FGk256Vf7Y92q ENCSR854IPI https://www.encodeproject.org/experiments/ENCSR854IPI "recombinant protein,transcription factor" eGFP-ZNF707-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF759UXN https://www.encodeproject.org/files/ENCFF759UXN/@@download/ENCFF759UXN.bam ENCFF242WRO https://www.encodeproject.org/files/ENCFF242WRO/@@download/ENCFF242WRO.bam 60.8 M 0 59.6 M 0.979 PE 101 101 native 26.3 M 0.0 M 26.1 M 0.859 0.99 0.99 175.03 205 1.06 3.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/503e1d86-cd90-4bba-8148-ec4a40d47198/@@download/cross_correlation_plot/ENCFF210PVGENCFF438MFB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB281MYK michael-snyder:HEK_eGFP-ZNF707_FRT_ChIP_L1 "ENCFF210PVG,ENCFF438MFB" HiSeq 2000 2016-09-14T19:19:14.308170+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Gjj036994Jx4PVBXKB17 ENCSR854IPI https://www.encodeproject.org/experiments/ENCSR854IPI "recombinant protein,transcription factor" eGFP-ZNF707-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF661VJW https://www.encodeproject.org/files/ENCFF661VJW/@@download/ENCFF661VJW.bam ENCFF658DRD https://www.encodeproject.org/files/ENCFF658DRD/@@download/ENCFF658DRD.bam 54.0 M 0 52.7 M 0.975 PE 101 101 native 23.1 M 0.0 M 23.0 M 0.850 0.99 0.99 149.36 190 1.07 3.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/46cd1e99-cf76-4ad6-b424-510d46700217/@@download/cross_correlation_plot/ENCFF522POFENCFF926PZX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB934VHO michael-snyder:HEK_eGFP-ZNF707_FRT_ChIP_L2 "ENCFF926PZX,ENCFF522POF" HiSeq 2000 2016-09-14T19:20:39.045311+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9Gvj03691jV3BQb6PVp5p ENCSR497IAS https://www.encodeproject.org/experiments/ENCSR497IAS "recombinant protein,transcription factor" eGFP-ZNF747-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF984GJD https://www.encodeproject.org/files/ENCFF984GJD/@@download/ENCFF984GJD.bam ENCFF879GIE https://www.encodeproject.org/files/ENCFF879GIE/@@download/ENCFF879GIE.bam 67.6 M 0 64.8 M 0.960 PE 101 101 native 28.2 M 0.0 M 27.7 M 0.820 0.98 0.98 60.81 210 1.06 4.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/7faeb3bb-01cb-4603-868a-50d7257c8018/@@download/cross_correlation_plot/ENCFF148YZKENCFF839AXL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB651RPN michael-snyder:HEK_eGFP-ZNF747_FRT_ChIP_L1 "ENCFF148YZK,ENCFF839AXL" HiSeq 2000 2016-12-15T06:13:36.787517+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qG7j0369F00q32BFF79b1 ENCSR497IAS https://www.encodeproject.org/experiments/ENCSR497IAS "recombinant protein,transcription factor" eGFP-ZNF747-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF948AXY https://www.encodeproject.org/files/ENCFF948AXY/@@download/ENCFF948AXY.bam ENCFF847VUP https://www.encodeproject.org/files/ENCFF847VUP/@@download/ENCFF847VUP.bam 68.7 M 0 65.8 M 0.957 PE 101 101 native 28.7 M 0.0 M 28.3 M 0.824 0.99 0.99 82.51 215 1.05 4.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d8b9f43-4d58-47aa-ad0c-cc0de890b0b0/@@download/cross_correlation_plot/ENCFF961HPBENCFF150KCT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB461JCB michael-snyder:HEK_eGFP-ZNF747_FRT_ChIP_L2 "ENCFF961HPB,ENCFF150KCT" HiSeq 2000 2016-12-15T06:13:10.574262+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJgj0369P8qVgK8XbYyGK ENCSR072LQF https://www.encodeproject.org/experiments/ENCSR072LQF "recombinant protein,transcription factor" eGFP-ZNF76-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF452KIM https://www.encodeproject.org/files/ENCFF452KIM/@@download/ENCFF452KIM.bam ENCFF774TAG https://www.encodeproject.org/files/ENCFF774TAG/@@download/ENCFF774TAG.bam 73.0 M 0 70.3 M 0.963 PE 101 101 native 30.5 M 0.0 M 30.4 M 0.832 0.99 0.99 186.17 200 1.20 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/709c90e6-6453-47b4-a545-ef2342d21f4e/@@download/cross_correlation_plot/ENCFF201BJKENCFF655YHB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB485LCK michael-snyder:HEK_eGFP-ZNF76_FRT_ChIP_L1 "ENCFF655YHB,ENCFF201BJK" HiSeq 2000 2016-09-14T19:25:44.102110+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8jV0036994Jx4PVBXK9jZ ENCSR072LQF https://www.encodeproject.org/experiments/ENCSR072LQF "recombinant protein,transcription factor" eGFP-ZNF76-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF478ATT https://www.encodeproject.org/files/ENCFF478ATT/@@download/ENCFF478ATT.bam ENCFF831EOF https://www.encodeproject.org/files/ENCFF831EOF/@@download/ENCFF831EOF.bam 42.5 M 0 41.6 M 0.980 PE 101 101 native 18.3 M 0.0 M 18.3 M 0.860 1.00 1.00 224.64 205 1.13 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/a94f236c-b526-478c-9c72-73a46dbd2cdf/@@download/cross_correlation_plot/ENCFF979NLPENCFF419EHN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB691XCD michael-snyder:HEK_eGFP-ZNF76_FRT_ChIP_L2 "ENCFF979NLP,ENCFF419EHN" HiSeq 2000 2016-09-14T19:19:46.618175+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8jgj03691jV3BQb6PVkxj ENCSR274LVQ https://www.encodeproject.org/experiments/ENCSR274LVQ "transcription factor,recombinant protein" eGFP-ZNF776-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF911WFF https://www.encodeproject.org/files/ENCFF911WFF/@@download/ENCFF911WFF.bam ENCFF128YYC https://www.encodeproject.org/files/ENCFF128YYC/@@download/ENCFF128YYC.bam 134.9 M 0 131.2 M 0.973 PE 101 101 native 56.0 M 0.0 M 51.8 M 0.767 0.92 0.92 12.89 210 1.03 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/6cc00089-c24a-46f1-a737-6d0fd8cbadfb/@@download/cross_correlation_plot/ENCFF197WIDENCFF845UON.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB254PTV michael-snyder:HEK_eGFP-ZNF776_FRT_ChIP_L1 "ENCFF845UON,ENCFF197WID" HiSeq 4000 2017-02-16T07:09:42.728085+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X98Y803693X6k942p89YkG ENCSR274LVQ https://www.encodeproject.org/experiments/ENCSR274LVQ "transcription factor,recombinant protein" eGFP-ZNF776-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF622REF https://www.encodeproject.org/files/ENCFF622REF/@@download/ENCFF622REF.bam ENCFF843YKM https://www.encodeproject.org/files/ENCFF843YKM/@@download/ENCFF843YKM.bam 148.9 M 0 144.9 M 0.973 PE 101 101 native 62.1 M 0.0 M 57.1 M 0.767 0.92 0.92 12.06 210 1.03 3.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b85bd64-50aa-4b3f-8d2c-d45c14856fb2/@@download/cross_correlation_plot/ENCFF421XZNENCFF319OJB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB092NVG michael-snyder:HEK_eGFP-ZNF776_FRT_ChIP_L2 "ENCFF421XZN,ENCFF319OJB" HiSeq 4000 2017-02-16T07:09:23.280967+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2X98pQ03691631x42P32zF6 ENCSR295BIP https://www.encodeproject.org/experiments/ENCSR295BIP "recombinant protein,transcription factor" eGFP-ZNF777-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF375RFW https://www.encodeproject.org/files/ENCFF375RFW/@@download/ENCFF375RFW.bam ENCFF560XXB https://www.encodeproject.org/files/ENCFF560XXB/@@download/ENCFF560XXB.bam 75.3 M 0 73.6 M 0.977 PE 101 101 native 32.1 M 0.0 M 31.9 M 0.848 1.00 1.00 213.01 215 1.05 3.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/c93ec852-bbe7-42ef-ad90-b85f30bc1aef/@@download/cross_correlation_plot/ENCFF964ODQENCFF891KUP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB606UHT michael-snyder:HEK_eGFP-ZNF777_FRT_ChIP_L1 "ENCFF891KUP,ENCFF964ODQ" HiSeq 2000 2017-03-04T18:24:52.496379+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv4J003698qYGG3j4Xqb0Q ENCSR295BIP https://www.encodeproject.org/experiments/ENCSR295BIP "recombinant protein,transcription factor" eGFP-ZNF777-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF706RWY https://www.encodeproject.org/files/ENCFF706RWY/@@download/ENCFF706RWY.bam ENCFF548HKD https://www.encodeproject.org/files/ENCFF548HKD/@@download/ENCFF548HKD.bam 88.7 M 0 86.6 M 0.977 PE 101 101 native 37.7 M 0.0 M 37.6 M 0.847 1.00 1.00 221.09 205 1.05 2.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d7e683f-6bc8-4967-a1a3-ea9afe25dab6/@@download/cross_correlation_plot/ENCFF890MKUENCFF201EHD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB109VHQ michael-snyder:HEK_eGFP-ZNF777_FRT_ChIP_L2 "ENCFF890MKU,ENCFF201EHD" HiSeq 2000 2017-03-04T18:27:19.729394+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv4kQ0369J5Gx63gGVj6x0 ENCSR777YSB https://www.encodeproject.org/experiments/ENCSR777YSB "recombinant protein,transcription factor" eGFP-ZNF781-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF167HRH https://www.encodeproject.org/files/ENCFF167HRH/@@download/ENCFF167HRH.bam ENCFF680PJS https://www.encodeproject.org/files/ENCFF680PJS/@@download/ENCFF680PJS.bam 51.7 M 0 48.3 M 0.934 PE 101 101 native 21.0 M 0.0 M 20.2 M 0.783 0.96 0.96 27.15 220 1.10 2.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ffbdd12-4e79-47c3-ab72-b8537fafc473/@@download/cross_correlation_plot/ENCFF180QILENCFF374YOG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB118GGT michael-snyder:HEK_eGFP-ZNF781_FRT_ChIP_L1 "ENCFF374YOG,ENCFF180QIL" HiSeq 2000 2016-09-14T19:17:53.639044+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9vy003695XjQpy58BVJB1 ENCSR777YSB https://www.encodeproject.org/experiments/ENCSR777YSB "recombinant protein,transcription factor" eGFP-ZNF781-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF652SLC https://www.encodeproject.org/files/ENCFF652SLC/@@download/ENCFF652SLC.bam ENCFF168GMP https://www.encodeproject.org/files/ENCFF168GMP/@@download/ENCFF168GMP.bam 39.5 M 0 35.5 M 0.898 PE 101 101 native 15.4 M 0.0 M 14.8 M 0.747 0.96 0.96 23.94 215 1.12 3.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d1adead-3ed5-481a-8c03-1bd10aa027c1/@@download/cross_correlation_plot/ENCFF931JHVENCFF835OOH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB865YZL michael-snyder:HEK_eGFP-ZNF781_FRT_ChIP_L2 "ENCFF931JHV,ENCFF835OOH" HiSeq 2000 2016-09-14T19:16:52.468592+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9x1j0369Kkk1Yvk89K1Z2 ENCSR950ACO https://www.encodeproject.org/experiments/ENCSR950ACO "recombinant protein,transcription factor" eGFP-ZNF785-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF178POG https://www.encodeproject.org/files/ENCFF178POG/@@download/ENCFF178POG.bam ENCFF110YBZ https://www.encodeproject.org/files/ENCFF110YBZ/@@download/ENCFF110YBZ.bam 68.4 M 0 65.8 M 0.962 PE 101 101 native 28.7 M 0.0 M 28.3 M 0.829 0.99 0.99 82.28 200 1.06 3.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/00db7984-d940-4349-86f1-f1805182731b/@@download/cross_correlation_plot/ENCFF912ESYENCFF830GPY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB749OZM michael-snyder:HEK_eGFP-ZNF785_FRT_ChIP_L1 "ENCFF912ESY,ENCFF830GPY" HiSeq 2000 2016-12-15T06:12:35.697500+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qF3j03693Bb8J2B4yy9pV ENCSR950ACO https://www.encodeproject.org/experiments/ENCSR950ACO "recombinant protein,transcription factor" eGFP-ZNF785-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF911MDN https://www.encodeproject.org/files/ENCFF911MDN/@@download/ENCFF911MDN.bam ENCFF634EAD https://www.encodeproject.org/files/ENCFF634EAD/@@download/ENCFF634EAD.bam 87.3 M 0 84.0 M 0.963 PE 101 101 native 36.6 M 0.0 M 36.2 M 0.828 0.99 0.99 75.94 210 1.05 2.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/26117f17-69e3-494c-b3dc-5642d57a0ac6/@@download/cross_correlation_plot/ENCFF555XUIENCFF212ALP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB200PPK michael-snyder:HEK_eGFP-ZNF785_FRT_ChIP_L2 "ENCFF555XUI,ENCFF212ALP" HiSeq 2000 2016-12-15T06:19:09.106991+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJY80369JqzzJB727gBPx ENCSR775HFF https://www.encodeproject.org/experiments/ENCSR775HFF "recombinant protein,transcription factor" eGFP-ZNF791-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF594LSU https://www.encodeproject.org/files/ENCFF594LSU/@@download/ENCFF594LSU.bam ENCFF333RQK https://www.encodeproject.org/files/ENCFF333RQK/@@download/ENCFF333RQK.bam 62.6 M 0 52.7 M 0.842 PE 101 101 native 22.9 M 0.0 M 22.2 M 0.709 0.97 0.97 31.27 205 1.07 3.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a09a20a-433f-4600-a073-6b0e68ccc979/@@download/cross_correlation_plot/ENCFF632RPDENCFF730SWR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB669YBA michael-snyder:HEK_eGFP-ZNF791_FRT_ChIP_L1 "ENCFF730SWR,ENCFF632RPD" HiSeq 2000 2016-12-15T03:11:47.804343+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFq00369B26QY29p8pq3V ENCSR775HFF https://www.encodeproject.org/experiments/ENCSR775HFF "recombinant protein,transcription factor" eGFP-ZNF791-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF608MRT https://www.encodeproject.org/files/ENCFF608MRT/@@download/ENCFF608MRT.bam ENCFF812WSH https://www.encodeproject.org/files/ENCFF812WSH/@@download/ENCFF812WSH.bam 65.3 M 0 55.6 M 0.851 PE 101 101 native 24.2 M 0.0 M 23.2 M 0.711 0.96 0.96 25.59 210 1.07 4.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/fdf28b56-13e9-4eb8-947b-dd53d89228fd/@@download/cross_correlation_plot/ENCFF586VYVENCFF142PPK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB840LZD michael-snyder:HEK_eGFP-ZNF791_FRT_ChIP_L2 "ENCFF142PPK,ENCFF586VYV" HiSeq 2000 2016-12-15T03:44:01.978196+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJvj03691VQjVJByZkKp4 ENCSR679STZ https://www.encodeproject.org/experiments/ENCSR679STZ "recombinant protein,transcription factor" eGFP-ZNF792-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF742IEI https://www.encodeproject.org/files/ENCFF742IEI/@@download/ENCFF742IEI.bam ENCFF016OAN https://www.encodeproject.org/files/ENCFF016OAN/@@download/ENCFF016OAN.bam 75.1 M 0 72.5 M 0.966 PE 101 101 native 31.3 M 0.0 M 31.1 M 0.828 0.99 0.99 166.99 195 1.06 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/5523a8e3-4c3c-4456-ba0a-c6f98b901eec/@@download/cross_correlation_plot/ENCFF755CGWENCFF513LZV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB816ULS michael-snyder:HEK_eGFP-ZNF792_FRT_ChIP_L1 "ENCFF755CGW,ENCFF513LZV" HiSeq 2000 2016-09-14T19:24:30.327675+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8qZ00369PBbP1x1p94z2p ENCSR679STZ https://www.encodeproject.org/experiments/ENCSR679STZ "recombinant protein,transcription factor" eGFP-ZNF792-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF226EFM https://www.encodeproject.org/files/ENCFF226EFM/@@download/ENCFF226EFM.bam ENCFF471IGS https://www.encodeproject.org/files/ENCFF471IGS/@@download/ENCFF471IGS.bam 65.5 M 0 63.4 M 0.969 PE 101 101 native 27.4 M 0.0 M 27.2 M 0.831 0.99 0.99 170.31 200 1.06 2.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/608fa531-f63e-4ca7-8534-5cbbd2160a90/@@download/cross_correlation_plot/ENCFF726QBOENCFF720SPJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB009EFY michael-snyder:HEK_eGFP-ZNF792_FRT_ChIP_L2 "ENCFF726QBO,ENCFF720SPJ" HiSeq 2000 2016-09-14T19:23:02.957459+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8qjQ03693JZG3y9p8vzYx ENCSR711UOA https://www.encodeproject.org/experiments/ENCSR711UOA "recombinant protein,transcription factor" eGFP-ZNF837-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF033YTZ https://www.encodeproject.org/files/ENCFF033YTZ/@@download/ENCFF033YTZ.bam ENCFF370LNK https://www.encodeproject.org/files/ENCFF370LNK/@@download/ENCFF370LNK.bam 64.1 M 0 62.1 M 0.969 PE 101 101 native 27.2 M 0.0 M 27.1 M 0.847 1.00 1.00 269.71 200 1.06 2.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/a05ccc1c-5bc8-4f29-b0d6-c7bffc9e9ab9/@@download/cross_correlation_plot/ENCFF940QRRENCFF413RLX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB236RXV michael-snyder:HEK_eGFP-ZNF837_FRT_ChIP_L1 "ENCFF413RLX,ENCFF940QRR" HiSeq 2000 2016-09-14T19:19:36.286142+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9GQ003696gGz8k04XPz6z ENCSR711UOA https://www.encodeproject.org/experiments/ENCSR711UOA "recombinant protein,transcription factor" eGFP-ZNF837-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF331WMN https://www.encodeproject.org/files/ENCFF331WMN/@@download/ENCFF331WMN.bam ENCFF075AWO https://www.encodeproject.org/files/ENCFF075AWO/@@download/ENCFF075AWO.bam 79.8 M 0 77.0 M 0.965 PE 101 101 native 33.7 M 0.0 M 33.5 M 0.839 0.99 0.99 165.34 195 1.05 2.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/37bde3dd-d059-4aa0-8069-8965a0603b3b/@@download/cross_correlation_plot/ENCFF708AQIENCFF569ROF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB108YCY michael-snyder:HEK_eGFP-ZNF837_FRT_ChIP_L2 "ENCFF708AQI,ENCFF569ROF" HiSeq 2000 2016-09-14T19:20:19.632339+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9GZ80369PBkYfgj4Z3Zyf ENCSR502KPJ https://www.encodeproject.org/experiments/ENCSR502KPJ "transcription factor,recombinant protein" eGFP-ZNF843-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF736KZH https://www.encodeproject.org/files/ENCFF736KZH/@@download/ENCFF736KZH.bam ENCFF352DFY https://www.encodeproject.org/files/ENCFF352DFY/@@download/ENCFF352DFY.bam 63.9 M 0 60.1 M 0.940 PE 101 101 native 26.4 M 0.0 M 26.0 M 0.814 0.99 0.99 70.71 210 1.10 2.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/06ebe30a-061b-459b-8a12-7cc7ce6280f1/@@download/cross_correlation_plot/ENCFF569UHHENCFF105RCC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB389QFT michael-snyder:HEK_eGFP-ZNF843_FRT_ChIP_L1 "ENCFF569UHH,ENCFF105RCC" HiSeq 2000 2016-12-15T03:29:39.536662+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18q9zQ0369P8qVgK8XbYy62 ENCSR502KPJ https://www.encodeproject.org/experiments/ENCSR502KPJ "transcription factor,recombinant protein" eGFP-ZNF843-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF305MVH https://www.encodeproject.org/files/ENCFF305MVH/@@download/ENCFF305MVH.bam ENCFF646NTT https://www.encodeproject.org/files/ENCFF646NTT/@@download/ENCFF646NTT.bam 69.9 M 0 63.9 M 0.914 PE 101 101 native 28.1 M 0.0 M 27.5 M 0.786 0.98 0.98 48.95 220 1.10 2.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5237ba2-0b80-42d1-828b-57c30ad32384/@@download/cross_correlation_plot/ENCFF951MCEENCFF729ADA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB460CLE michael-snyder:HEK_eGFP-ZNF843_FRT_ChIP_L2 "ENCFF729ADA,ENCFF951MCE" HiSeq 2000 2016-12-15T06:12:59.352932+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBkj0369B26QY29p8pq0B ENCSR864VJE https://www.encodeproject.org/experiments/ENCSR864VJE "recombinant protein,transcription factor" eGFP-ZSCAN16-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF902TKE https://www.encodeproject.org/files/ENCFF902TKE/@@download/ENCFF902TKE.bam ENCFF579CNK https://www.encodeproject.org/files/ENCFF579CNK/@@download/ENCFF579CNK.bam 63.6 M 0 61.3 M 0.965 PE 101 101 native 27.1 M 0.0 M 26.8 M 0.843 0.99 0.99 80.47 200 1.07 3.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/db5a4539-7130-4989-a5cb-12b0de38f8a6/@@download/cross_correlation_plot/ENCFF360SUAENCFF899ZUF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB994YCZ michael-snyder:HEK_eGFP-ZSCAN16_FRT_ChIP_L1 "ENCFF899ZUF,ENCFF360SUA" HiSeq 2000 2016-09-14T19:18:40.337680+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG96qQ0369JPg0Xjj75v42Q ENCSR864VJE https://www.encodeproject.org/experiments/ENCSR864VJE "recombinant protein,transcription factor" eGFP-ZSCAN16-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF738GKY https://www.encodeproject.org/files/ENCFF738GKY/@@download/ENCFF738GKY.bam ENCFF577KXM https://www.encodeproject.org/files/ENCFF577KXM/@@download/ENCFF577KXM.bam 60.7 M 0 58.1 M 0.958 PE 101 101 native 25.7 M 0.0 M 25.4 M 0.837 0.99 0.99 83.89 200 1.07 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd470210-66c6-4ec3-b5f2-4f0265099505/@@download/cross_correlation_plot/ENCFF093AOCENCFF146YVN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB013WRU michael-snyder:HEK_eGFP-ZSCAN16_FRT_ChIP_L2 "ENCFF093AOC,ENCFF146YVN" HiSeq 2000 2016-09-14T19:21:11.866783+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG96zQ03695gqq4YJBj8k75 ENCSR721QZV https://www.encodeproject.org/experiments/ENCSR721QZV "transcription factor,recombinant protein" eGFP-ZSCAN18-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF435APT https://www.encodeproject.org/files/ENCFF435APT/@@download/ENCFF435APT.bam ENCFF320UUL https://www.encodeproject.org/files/ENCFF320UUL/@@download/ENCFF320UUL.bam 61.3 M 0 59.9 M 0.977 PE 101 101 native 26.3 M 0.0 M 25.8 M 0.841 0.98 0.98 50.00 190 1.06 4.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c891529-f7b8-4cb2-bc37-3ed342852dc5/@@download/cross_correlation_plot/ENCFF710WZAENCFF174BEA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB716ACZ michael-snyder:HEK_eGFP-ZSCAN18_FRT_ChIP_L1 "ENCFF710WZA,ENCFF174BEA" HiSeq 2000 2016-12-15T03:47:38.851052+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qBVj036974yqx29x5Z5y6 ENCSR721QZV https://www.encodeproject.org/experiments/ENCSR721QZV "transcription factor,recombinant protein" eGFP-ZSCAN18-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF264FVO https://www.encodeproject.org/files/ENCFF264FVO/@@download/ENCFF264FVO.bam ENCFF116DPJ https://www.encodeproject.org/files/ENCFF116DPJ/@@download/ENCFF116DPJ.bam 60.2 M 0 59.0 M 0.979 PE 101 101 native 25.9 M 0.0 M 25.4 M 0.842 0.98 0.98 44.77 210 1.06 4.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/940027e1-6a69-4458-9e51-1029b47c146d/@@download/cross_correlation_plot/ENCFF962THEENCFF695ICE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB787DAO michael-snyder:HEK_eGFP-ZSCAN18_FRT_ChIP_L2 "ENCFF962THE,ENCFF695ICE" HiSeq 2000 2016-12-15T03:39:42.455924+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFqQ03694jP708pv8X4v7 ENCSR253CKN https://www.encodeproject.org/experiments/ENCSR253CKN "recombinant protein,transcription factor" eGFP-ZSCAN21-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF745TSL https://www.encodeproject.org/files/ENCFF745TSL/@@download/ENCFF745TSL.bam ENCFF753JWH https://www.encodeproject.org/files/ENCFF753JWH/@@download/ENCFF753JWH.bam 110.1 M 0 108.1 M 0.982 PE 101 101 native 47.8 M 0.0 M 47.0 M 0.854 0.98 0.98 57.06 205 1.05 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/474e8808-26e8-49c5-aa9d-0a8175d65b7f/@@download/cross_correlation_plot/ENCFF707AMGENCFF461NQQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB007TUM michael-snyder:HEK_eGFP-ZSCAN21_FRT_ChIP_L1 "ENCFF461NQQ,ENCFF707AMG" HiSeq 2000 2016-09-14T19:31:15.194109+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8x700369GYv1KkxpKXv8v ENCSR253CKN https://www.encodeproject.org/experiments/ENCSR253CKN "recombinant protein,transcription factor" eGFP-ZSCAN21-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF659TYR https://www.encodeproject.org/files/ENCFF659TYR/@@download/ENCFF659TYR.bam ENCFF690IMR https://www.encodeproject.org/files/ENCFF690IMR/@@download/ENCFF690IMR.bam 79.9 M 0 78.3 M 0.980 PE 101 101 native 34.5 M 0.0 M 34.1 M 0.853 0.99 0.99 90.10 210 1.06 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/0dc85050-e8a3-49b6-bf54-032bd17e9bcc/@@download/cross_correlation_plot/ENCFF558LMKENCFF423IUW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB272QRO michael-snyder:HEK_eGFP-ZSCAN21_FRT_ChIP_L2 "ENCFF558LMK,ENCFF423IUW" HiSeq 2000 2016-09-14T19:24:36.322018+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8xG00369G2Yz4yQjpq81P ENCSR705ASR https://www.encodeproject.org/experiments/ENCSR705ASR "recombinant protein,transcription factor" eGFP-ZSCAN23-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF803DFJ https://www.encodeproject.org/files/ENCFF803DFJ/@@download/ENCFF803DFJ.bam ENCFF255KBP https://www.encodeproject.org/files/ENCFF255KBP/@@download/ENCFF255KBP.bam 57.8 M 0 56.3 M 0.975 PE 101 101 native 24.8 M 0.0 M 24.4 M 0.845 0.99 0.99 71.57 215 1.07 3.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/44eab0b8-d1ce-41e0-b006-49d62ba95441/@@download/cross_correlation_plot/ENCFF908JVLENCFF342RDH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB383ESH michael-snyder:HEK_eGFP-ZSCAN23_FRT_ChIP_L1 "ENCFF908JVL,ENCFF342RDH" HiSeq 2000 2016-09-14T19:27:51.197195+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9PVj03692xk39gZV1444k ENCSR705ASR https://www.encodeproject.org/experiments/ENCSR705ASR "recombinant protein,transcription factor" eGFP-ZSCAN23-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF995VXB https://www.encodeproject.org/files/ENCFF995VXB/@@download/ENCFF995VXB.bam ENCFF736OHM https://www.encodeproject.org/files/ENCFF736OHM/@@download/ENCFF736OHM.bam 67.6 M 0 65.6 M 0.970 PE 101 101 native 28.7 M 0.0 M 28.3 M 0.838 0.99 0.99 85.05 210 1.06 3.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/42a37620-e27e-4958-98e2-769d626244af/@@download/cross_correlation_plot/ENCFF822SXZENCFF558BIU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB817RYQ michael-snyder:HEK_eGFP-ZSCAN23_FRT_ChIP_L2 "ENCFF822SXZ,ENCFF558BIU" HiSeq 2000 2016-09-14T19:28:13.156132+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG9PfQ0369F1Xf4jx84ZFV5 ENCSR501NSC https://www.encodeproject.org/experiments/ENCSR501NSC "transcription factor,recombinant protein" eGFP-ZSCAN26-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF473ZIB https://www.encodeproject.org/files/ENCFF473ZIB/@@download/ENCFF473ZIB.bam ENCFF426ZKI https://www.encodeproject.org/files/ENCFF426ZKI/@@download/ENCFF426ZKI.bam 96.8 M 0 93.9 M 0.970 PE 101 101 native 40.1 M 0.0 M 38.1 M 0.786 0.95 0.95 18.89 210 1.05 3.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/b2c7a45f-5ad0-4fed-97bf-8092fcba7ba1/@@download/cross_correlation_plot/ENCFF681BWMENCFF909TNH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB116NBM michael-snyder:HEK_eGFP-ZSCAN26_FRT_ChIP_L1 "ENCFF681BWM,ENCFF909TNH" HiSeq 4000 2017-03-04T18:19:28.053935+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv4Yj03695070G3gkKXgGv ENCSR501NSC https://www.encodeproject.org/experiments/ENCSR501NSC "transcription factor,recombinant protein" eGFP-ZSCAN26-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF696XHK https://www.encodeproject.org/files/ENCFF696XHK/@@download/ENCFF696XHK.bam ENCFF274ERQ https://www.encodeproject.org/files/ENCFF274ERQ/@@download/ENCFF274ERQ.bam 76.2 M 0 73.6 M 0.966 PE 101 101 native 30.8 M 0.0 M 29.4 M 0.771 0.95 0.95 21.09 210 1.05 3.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbc41f90-40bd-4996-bef5-9bde734f8130/@@download/cross_correlation_plot/ENCFF234XINENCFF373KIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB467KZO michael-snyder:HEK_eGFP-ZSCAN26_FRT_ChIP_L2 "ENCFF234XIN,ENCFF373KIQ" HiSeq 4000 2017-03-04T18:18:09.339823+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv4z003690BfbX8251GGbf ENCSR211GNP https://www.encodeproject.org/experiments/ENCSR211GNP "recombinant protein,transcription factor" eGFP-ZSCAN4-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF926QFI https://www.encodeproject.org/files/ENCFF926QFI/@@download/ENCFF926QFI.bam ENCFF084HNC https://www.encodeproject.org/files/ENCFF084HNC/@@download/ENCFF084HNC.bam 50.9 M 0 49.9 M 0.980 PE 101 101 native 22.0 M 0.0 M 21.5 M 0.844 0.98 0.98 41.24 210 1.19 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/73816f77-2d79-4139-b70d-ec286790c54d/@@download/cross_correlation_plot/ENCFF171NPBENCFF655DBC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB992LPQ michael-snyder:HEK_eGFP-ZSCAN4_FRT_ChIP_L1 "ENCFF171NPB,ENCFF655DBC" HiSeq 2000 2017-02-14T17:30:13.123613+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0xX00369J63Vk3JbkqfkY ENCSR211GNP https://www.encodeproject.org/experiments/ENCSR211GNP "recombinant protein,transcription factor" eGFP-ZSCAN4-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF904GDU https://www.encodeproject.org/files/ENCFF904GDU/@@download/ENCFF904GDU.bam ENCFF376QVY https://www.encodeproject.org/files/ENCFF376QVY/@@download/ENCFF376QVY.bam 56.1 M 0 54.9 M 0.979 PE 101 101 native 24.2 M 0.0 M 23.9 M 0.851 0.99 0.99 76.77 210 1.19 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b3fe310-83c7-408e-a410-aa0bb2754e19/@@download/cross_correlation_plot/ENCFF070HUCENCFF791KUN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB692ODO michael-snyder:HEK_eGFP-ZSCAN4_FRT_ChIP_L2 "ENCFF070HUC,ENCFF791KUN" HiSeq 2000 2017-02-14T17:30:24.632986+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2V0xz803693zJpP3vZz16zQ ENCSR357QJR https://www.encodeproject.org/experiments/ENCSR357QJR "recombinant protein,transcription factor" eGFP-ZSCAN5A-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF155GFD https://www.encodeproject.org/files/ENCFF155GFD/@@download/ENCFF155GFD.bam ENCFF632SNY https://www.encodeproject.org/files/ENCFF632SNY/@@download/ENCFF632SNY.bam 81.6 M 0 79.4 M 0.972 PE 101 101 native 34.8 M 0.0 M 34.6 M 0.848 1.00 1.00 204.82 200 1.06 2.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/f407010d-e3ee-4f81-a087-d33b0eab2cc8/@@download/cross_correlation_plot/ENCFF022LNWENCFF915HPV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB047TUO michael-snyder:HEK_eGFP-ZSCAN5A_FRT_ChIP_L1 "ENCFF915HPV,ENCFF022LNW" HiSeq 2000 2016-09-14T19:27:40.917966+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8kQ00369BvpJbQkBjP9QY ENCSR357QJR https://www.encodeproject.org/experiments/ENCSR357QJR "recombinant protein,transcription factor" eGFP-ZSCAN5A-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF097UUE https://www.encodeproject.org/files/ENCFF097UUE/@@download/ENCFF097UUE.bam ENCFF888LMO https://www.encodeproject.org/files/ENCFF888LMO/@@download/ENCFF888LMO.bam 59.5 M 0 57.0 M 0.958 PE 101 101 native 25.0 M 0.0 M 24.8 M 0.834 0.99 0.99 149.24 200 1.06 2.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/23bc7702-fad6-4218-98e0-1b0f9fabf44b/@@download/cross_correlation_plot/ENCFF896GERENCFF992BVX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB072EGE michael-snyder:HEK_eGFP-ZSCAN5A_FRT_ChIP_L2 "ENCFF896GER,ENCFF992BVX" HiSeq 2000 2016-09-14T19:24:49.382457+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8kZ00369JPg0Xjj75v3xJ ENCSR731AGO https://www.encodeproject.org/experiments/ENCSR731AGO "recombinant protein,transcription factor" eGFP-ZSCAN5CP-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF827AFP https://www.encodeproject.org/files/ENCFF827AFP/@@download/ENCFF827AFP.bam ENCFF167BEH https://www.encodeproject.org/files/ENCFF167BEH/@@download/ENCFF167BEH.bam 63.8 M 0 62.3 M 0.977 PE 101 101 native 27.2 M 0.0 M 27.0 M 0.848 1.00 1.00 253.96 200 1.08 2.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b6aa869-667e-4a41-8494-e8b013be2409/@@download/cross_correlation_plot/ENCFF742XIJENCFF696YWZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB846HBQ michael-snyder:HEK_eGFP-ZSCAN5CP_FRT_ChIP_L1 "ENCFF696YWZ,ENCFF742XIJ" HiSeq 2000 2017-03-04T18:23:50.739750+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv3JQ0369JGG095Jvz4vkP ENCSR731AGO https://www.encodeproject.org/experiments/ENCSR731AGO "recombinant protein,transcription factor" eGFP-ZSCAN5CP-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF055AXC https://www.encodeproject.org/files/ENCFF055AXC/@@download/ENCFF055AXC.bam ENCFF094CPO https://www.encodeproject.org/files/ENCFF094CPO/@@download/ENCFF094CPO.bam 115.5 M 0 112.7 M 0.975 PE 101 101 native 48.2 M 0.0 M 46.6 M 0.807 0.97 0.97 30.02 150 1.05 2.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/67299398-04d9-40fb-b8ec-2df8a3a60363/@@download/cross_correlation_plot/ENCFF581XPHENCFF568TBG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB067BTI michael-snyder:HEK_eGFP-ZSCAN5CP_FRT_ChIP_L2 "ENCFF581XPH,ENCFF568TBG" HiSeq 2000 2017-03-04T18:32:34.743221+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv3pj03695V6455JgFB409 ENCSR559IOZ https://www.encodeproject.org/experiments/ENCSR559IOZ "recombinant protein,transcription factor" eGFP-ZXDB-human HEK293 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF100KZW https://www.encodeproject.org/files/ENCFF100KZW/@@download/ENCFF100KZW.bam ENCFF038MAB https://www.encodeproject.org/files/ENCFF038MAB/@@download/ENCFF038MAB.bam 72.0 M 0 69.1 M 0.959 PE 101 101 native 30.2 M 0.0 M 29.5 M 0.819 0.98 0.98 43.97 210 1.11 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/04cf1cd9-8678-444a-ba43-58dd7c3c33df/@@download/cross_correlation_plot/ENCFF155JSYENCFF795PET.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB741XLE michael-snyder:HEK_eGFP-ZXDB_FRT_ChIP_L1 "ENCFF155JSY,ENCFF795PET" HiSeq 2000 2016-09-14T19:25:52.944098+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8pZj03695gqq4YJBj8k08 ENCSR559IOZ https://www.encodeproject.org/experiments/ENCSR559IOZ "recombinant protein,transcription factor" eGFP-ZXDB-human HEK293 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF318TPO https://www.encodeproject.org/files/ENCFF318TPO/@@download/ENCFF318TPO.bam ENCFF355OYP https://www.encodeproject.org/files/ENCFF355OYP/@@download/ENCFF355OYP.bam 68.5 M 0 65.7 M 0.959 PE 101 101 native 28.8 M 0.0 M 28.3 M 0.825 0.98 0.98 53.42 215 1.12 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b4603d7-5e08-492f-9349-443dfba1daa8/@@download/cross_correlation_plot/ENCFF524NNDENCFF665GYY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB524GWB michael-snyder:HEK_eGFP-ZXDB_FRT_ChIP_L2 "ENCFF665GYY,ENCFF524NND" HiSeq 2000 2016-09-14T19:25:04.490956+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzG8pk003691jV3BQb6PVkz2 ENCSR760UKJ https://www.encodeproject.org/experiments/ENCSR760UKJ transcription factor ARNT-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF406CYG https://www.encodeproject.org/files/ENCFF406CYG/@@download/ENCFF406CYG.bam ENCFF184TWS https://www.encodeproject.org/files/ENCFF184TWS/@@download/ENCFF184TWS.bam 75.0 M 0 72.3 M 0.965 PE 100 100 native 32.0 M 0.0 M 28.9 M 0.770 0.90 0.90 10.12 155 1.07 3.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/b56bf037-5ef9-4c57-9640-8ab0282cec1c/@@download/cross_correlation_plot/ENCFF119WDGENCFF109JFR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB437FPD michael-snyder:L-3364 "ENCFF119WDG,ENCFF109JFR" HiSeq 4000 2017-04-09T00:00:23.854980+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z04P00369F1JbQJkBV2xvG ENCSR760UKJ https://www.encodeproject.org/experiments/ENCSR760UKJ transcription factor ARNT-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF136IZY https://www.encodeproject.org/files/ENCFF136IZY/@@download/ENCFF136IZY.bam ENCFF775PDT https://www.encodeproject.org/files/ENCFF775PDT/@@download/ENCFF775PDT.bam 102.9 M 0 98.2 M 0.954 PE 100 100 native 43.2 M 0.0 M 37.7 M 0.733 0.87 0.87 7.67 135 1.06 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe2ae56a-54dc-4cd6-907c-1c78fb375a6a/@@download/cross_correlation_plot/ENCFF898GAPENCFF279YEI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB530JDO michael-snyder:L-3365 "ENCFF279YEI,ENCFF898GAP" HiSeq 4000 2017-04-09T00:01:04.736484+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z04Y803698XbQVJp80QJj0 ENCSR789GVU https://www.encodeproject.org/experiments/ENCSR789GVU transcription factor BHLHE40-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF360GUG https://www.encodeproject.org/files/ENCFF360GUG/@@download/ENCFF360GUG.bam ENCFF023TRG https://www.encodeproject.org/files/ENCFF023TRG/@@download/ENCFF023TRG.bam 102.0 M 0 99.0 M 0.970 PE 100 100 native 43.2 M 0.0 M 36.7 M 0.719 0.85 0.85 6.43 235 1.04 4.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/4bb967b4-0141-4bb9-a3ef-aeb227cbbca6/@@download/cross_correlation_plot/ENCFF527YMQENCFF387TMU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB791OSI michael-snyder:L-3054 "ENCFF387TMU,ENCFF527YMQ" HiSeq 4000 2016-10-27T22:25:24.525377+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bvx003694q32PPxBJ6b28 ENCSR789GVU https://www.encodeproject.org/experiments/ENCSR789GVU transcription factor BHLHE40-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF247CVJ https://www.encodeproject.org/files/ENCFF247CVJ/@@download/ENCFF247CVJ.bam ENCFF672XCP https://www.encodeproject.org/files/ENCFF672XCP/@@download/ENCFF672XCP.bam 104.0 M 0 101.0 M 0.972 PE 100 100 native 44.1 M 0.0 M 34.3 M 0.660 0.78 0.77 4.30 235 1.05 4.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/b0e9a2e4-0dc0-4d7c-8ff5-d31aa674b1e2/@@download/cross_correlation_plot/ENCFF171ZAEENCFF111KWK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB602AKW michael-snyder:L-3055 "ENCFF111KWK,ENCFF171ZAE" HiSeq 4000 2016-10-27T22:26:06.582637+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bx0Q0369GJ6xQfbB7F616 ENCSR272LXW https://www.encodeproject.org/experiments/ENCSR272LXW control Control-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF802NAW https://www.encodeproject.org/files/ENCFF802NAW/@@download/ENCFF802NAW.bam ENCFF080HGX https://www.encodeproject.org/files/ENCFF080HGX/@@download/ENCFF080HGX.bam 110.6 M 0 95.8 M 0.866 PE 100 100 native 41.8 M 0.0 M 37.6 M 0.680 0.91 0.91 10.73 225 1.04 4.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/510a7c89-cb00-44fc-9c0a-c184e141db2f/@@download/cross_correlation_plot/ENCFF321ZMOENCFF642BHL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB063FMR michael-snyder:L-3066 "ENCFF642BHL,ENCFF321ZMO" HiSeq 4000 2016-10-27T22:28:24.888304+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bg6803694q32PPxBJ6Zz6 ENCSR272LXW https://www.encodeproject.org/experiments/ENCSR272LXW control Control-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF705ARK https://www.encodeproject.org/files/ENCFF705ARK/@@download/ENCFF705ARK.bam ENCFF812LAJ https://www.encodeproject.org/files/ENCFF812LAJ/@@download/ENCFF812LAJ.bam 91.2 M 0 88.9 M 0.974 PE 100 100 native 38.7 M 0.0 M 30.9 M 0.677 0.80 0.80 4.78 230 1.04 7.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e60f6f4-42b3-40bb-929f-85601bed0ae3/@@download/cross_correlation_plot/ENCFF044RFMENCFF833AEQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB044ISD michael-snyder:L-3067 "ENCFF833AEQ,ENCFF044RFM" HiSeq 4000 2016-10-27T22:29:30.272274+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bgB00369BX1xqb1B80vQp ENCSR386FAB https://www.encodeproject.org/experiments/ENCSR386FAB control Control-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF488RJA https://www.encodeproject.org/files/ENCFF488RJA/@@download/ENCFF488RJA.bam ENCFF495CIW https://www.encodeproject.org/files/ENCFF495CIW/@@download/ENCFF495CIW.bam 90.2 M 0 79.5 M 0.881 PE 100 100 native 35.2 M 0.0 M 32.1 M 0.713 0.92 0.92 13.04 220 1.05 5.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6872f9b-3838-4113-9d61-770d2640edd8/@@download/cross_correlation_plot/ENCFF023XZIENCFF644IGO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB939BXA michael-snyder:L-3072 "ENCFF023XZI,ENCFF644IGO" HiSeq 2000 2016-10-27T22:31:10.528527+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bj2j03695YX1xgJBKFkYJ ENCSR386FAB https://www.encodeproject.org/experiments/ENCSR386FAB control Control-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF290DLX https://www.encodeproject.org/files/ENCFF290DLX/@@download/ENCFF290DLX.bam ENCFF008GCZ https://www.encodeproject.org/files/ENCFF008GCZ/@@download/ENCFF008GCZ.bam 96.3 M 0 94.0 M 0.976 PE 100 100 native 41.5 M 0.0 M 32.7 M 0.679 0.79 0.79 4.59 220 1.05 4.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/f07ef8d8-6626-4d02-a87d-d9698a57324b/@@download/cross_correlation_plot/ENCFF005OJLENCFF862EKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB552KLV michael-snyder:L-3073 "ENCFF862EKZ,ENCFF005OJL" HiSeq 2000 2016-10-27T22:28:26.115709+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bj600369GJ6xQfbB7F5x1 ENCSR821YOI https://www.encodeproject.org/experiments/ENCSR821YOI control Control-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF136TIZ https://www.encodeproject.org/files/ENCFF136TIZ/@@download/ENCFF136TIZ.bam ENCFF058RHL https://www.encodeproject.org/files/ENCFF058RHL/@@download/ENCFF058RHL.bam 212.6 M 0 193.0 M 0.908 PE 100 100 native 51.4 M 0.0 M 49.7 M 0.467 0.97 0.97 28.87 320 1.18 5.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/24f78ce8-1ea3-42d3-8f49-1a15f9dd1635/@@download/cross_correlation_plot/ENCFF873IPHENCFF065AHM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB284DMO michael-snyder:L-3095 "ENCFF873IPH,ENCFF065AHM" HiSeq 2000 2017-02-07T19:41:44.783808+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GFj2003694vx9yFzjV3bzP ENCSR821YOI https://www.encodeproject.org/experiments/ENCSR821YOI control Control-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF258IKI https://www.encodeproject.org/files/ENCFF258IKI/@@download/ENCFF258IKI.bam ENCFF025HKU https://www.encodeproject.org/files/ENCFF025HKU/@@download/ENCFF025HKU.bam 181.6 M 0 178.3 M 0.982 PE 100 100 native 76.8 M 0.0 M 75.2 M 0.828 0.98 0.98 47.57 260 1.01 4.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/01df0063-dd46-458a-8637-59bab51fa20d/@@download/cross_correlation_plot/ENCFF404FJGENCFF204DFQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB485YOJ michael-snyder:L-3491 "ENCFF204DFQ,ENCFF404FJG" HiSeq 2000 2017-07-14T19:31:20.491060+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5Yvjj80369G9jFF19zG2X85 ENCSR237TFX https://www.encodeproject.org/experiments/ENCSR237TFX "transcription factor,chromatin remodeller" CTBP1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF054HSY https://www.encodeproject.org/files/ENCFF054HSY/@@download/ENCFF054HSY.bam ENCFF142YLJ https://www.encodeproject.org/files/ENCFF142YLJ/@@download/ENCFF142YLJ.bam 90.2 M 0 88.2 M 0.978 PE 100 100 native 38.0 M 0.0 M 37.4 M 0.830 0.99 0.99 68.94 190 1.06 3.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/de47897e-cd57-4bbb-90fd-ee626296e127/@@download/cross_correlation_plot/ENCFF382VVCENCFF383NLP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB939DXY michael-snyder:L-3034 "ENCFF382VVC,ENCFF383NLP" HiSeq 2000 2016-10-27T22:36:13.988797+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfZQ0369GJ6xQfbB7F5v4 ENCSR237TFX https://www.encodeproject.org/experiments/ENCSR237TFX "transcription factor,chromatin remodeller" CTBP1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF724LHA https://www.encodeproject.org/files/ENCFF724LHA/@@download/ENCFF724LHA.bam ENCFF126NIZ https://www.encodeproject.org/files/ENCFF126NIZ/@@download/ENCFF126NIZ.bam 81.6 M 0 79.3 M 0.971 PE 100 100 native 33.8 M 0.0 M 32.9 M 0.805 0.97 0.97 34.72 180 1.07 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/326bc1a7-2957-4319-98b1-273d17c25e78/@@download/cross_correlation_plot/ENCFF544CJYENCFF810COJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB609YJT michael-snyder:L-3035 "ENCFF544CJY,ENCFF810COJ" HiSeq 2000 2016-10-27T22:33:44.721341+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfgj03694q32PPxBJ6ZyG ENCSR778QLY https://www.encodeproject.org/experiments/ENCSR778QLY transcription factor ELF4-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF819DOC https://www.encodeproject.org/files/ENCFF819DOC/@@download/ENCFF819DOC.bam ENCFF688OOD https://www.encodeproject.org/files/ENCFF688OOD/@@download/ENCFF688OOD.bam 62.7 M 0 59.3 M 0.946 PE 100 100 native 23.6 M 0.0 M 21.8 M 0.694 0.92 0.92 12.51 210 1.08 4.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/97223d21-db80-455e-a69f-d62f04103537/@@download/cross_correlation_plot/ENCFF474NLUENCFF067QCH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB677GAI michael-snyder:L-2968 "ENCFF474NLU,ENCFF067QCH" HiSeq 2000 2016-10-27T22:25:37.905062+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bvbj0369PQyG3V5B45065 ENCSR778QLY https://www.encodeproject.org/experiments/ENCSR778QLY transcription factor ELF4-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF421ZIB https://www.encodeproject.org/files/ENCFF421ZIB/@@download/ENCFF421ZIB.bam ENCFF978INA https://www.encodeproject.org/files/ENCFF978INA/@@download/ENCFF978INA.bam 82.8 M 0 78.6 M 0.949 PE 100 100 native 31.4 M 0.0 M 28.9 M 0.699 0.92 0.92 12.71 195 1.07 3.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ab60218-b358-40db-978f-452483af2e1e/@@download/cross_correlation_plot/ENCFF439QJVENCFF242LHV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB772CWX michael-snyder:L-2969 "ENCFF242LHV,ENCFF439QJV" HiSeq 2000 2016-10-27T22:30:10.940927+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bvk80369GJ6xQfbB7F60Y ENCSR094WHO https://www.encodeproject.org/experiments/ENCSR094WHO transcription factor FOXA1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF600NPD https://www.encodeproject.org/files/ENCFF600NPD/@@download/ENCFF600NPD.bam ENCFF210CBH https://www.encodeproject.org/files/ENCFF210CBH/@@download/ENCFF210CBH.bam 69.2 M 0 67.2 M 0.971 PE 100 100 native 29.1 M 0.0 M 25.6 M 0.742 0.88 0.88 8.17 205 1.06 5.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/72bb0315-100e-4f5e-b432-e9aef1c51610/@@download/cross_correlation_plot/ENCFF613WSVENCFF809EPG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB988ZBI michael-snyder:L-2972 "ENCFF613WSV,ENCFF809EPG" HiSeq 2000 2016-10-27T22:32:41.341457+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bYJj03697KPkyX9BPQF14 ENCSR094WHO https://www.encodeproject.org/experiments/ENCSR094WHO transcription factor FOXA1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF778ZCF https://www.encodeproject.org/files/ENCFF778ZCF/@@download/ENCFF778ZCF.bam ENCFF620RWC https://www.encodeproject.org/files/ENCFF620RWC/@@download/ENCFF620RWC.bam 56.8 M 0 55.1 M 0.970 PE 100 100 native 23.6 M 0.0 M 21.2 M 0.748 0.90 0.90 9.80 205 1.07 6.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/008ad88e-5455-4595-99ad-4fc45de03974/@@download/cross_correlation_plot/ENCFF017YSGENCFF691KWL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB983XLW michael-snyder:L-2973 "ENCFF017YSG,ENCFF691KWL" HiSeq 2000 2016-10-27T22:34:58.004128+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bYZQ0369GJ6xQfbB7F5pq ENCSR872BOU https://www.encodeproject.org/experiments/ENCSR872BOU transcription factor FOXK2-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF258WGM https://www.encodeproject.org/files/ENCFF258WGM/@@download/ENCFF258WGM.bam ENCFF844WOQ https://www.encodeproject.org/files/ENCFF844WOQ/@@download/ENCFF844WOQ.bam 114.4 M 0 110.8 M 0.968 PE 100 100 native 48.3 M 0.0 M 41.2 M 0.720 0.85 0.85 6.61 230 1.04 4.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb81ec65-5b20-4f09-b43b-345322557d74/@@download/cross_correlation_plot/ENCFF053MVOENCFF845QUV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB514CUO michael-snyder:L-3056 "ENCFF845QUV,ENCFF053MVO" HiSeq 4000 2016-10-27T22:17:36.129743+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bygj03695YX1xgJBKFkxx ENCSR872BOU https://www.encodeproject.org/experiments/ENCSR872BOU transcription factor FOXK2-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF764EWY https://www.encodeproject.org/files/ENCFF764EWY/@@download/ENCFF764EWY.bam ENCFF036TDM https://www.encodeproject.org/files/ENCFF036TDM/@@download/ENCFF036TDM.bam 123.0 M 0 119.0 M 0.967 PE 100 100 native 51.8 M 0.0 M 42.3 M 0.688 0.82 0.81 5.27 235 1.03 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/1554d8c2-bc14-493f-8b61-05766462c532/@@download/cross_correlation_plot/ENCFF482CBGENCFF172SIG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB596HYQ michael-snyder:L-3057 "ENCFF482CBG,ENCFF172SIG" HiSeq 4000 2016-10-27T22:16:24.847637+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08byq00369GJ6xQfbB7F62K ENCSR831EIW https://www.encodeproject.org/experiments/ENCSR831EIW transcription factor FOXM1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF769AMJ https://www.encodeproject.org/files/ENCFF769AMJ/@@download/ENCFF769AMJ.bam ENCFF766ISM https://www.encodeproject.org/files/ENCFF766ISM/@@download/ENCFF766ISM.bam 80.6 M 0 78.5 M 0.974 PE 100 100 native 34.4 M 0.0 M 29.1 M 0.721 0.85 0.84 6.32 175 1.07 7.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9b27b48-11d9-4f56-99ba-9dbe23263607/@@download/cross_correlation_plot/ENCFF483BRWENCFF238UVA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB600OVW michael-snyder:L-3370 "ENCFF238UVA,ENCFF483BRW" HiSeq 4000 2017-04-09T00:00:27.655256+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z04600369KfBkKFP5XjKB8 ENCSR831EIW https://www.encodeproject.org/experiments/ENCSR831EIW transcription factor FOXM1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF847XON https://www.encodeproject.org/files/ENCFF847XON/@@download/ENCFF847XON.bam ENCFF852JUK https://www.encodeproject.org/files/ENCFF852JUK/@@download/ENCFF852JUK.bam 104.0 M 0 101.7 M 0.978 PE 100 100 native 45.1 M 0.0 M 38.2 M 0.735 0.85 0.85 6.37 150 1.07 2.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/65887b3b-9009-4ea0-bfd9-a14279edb03f/@@download/cross_correlation_plot/ENCFF256RPRENCFF870RNA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB679RXW michael-snyder:L-3371 "ENCFF256RPR,ENCFF870RNA" HiSeq 4000 2017-04-09T00:01:41.614841+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z04B0036919VFJJkQGpqFZ ENCSR522LDJ https://www.encodeproject.org/experiments/ENCSR522LDJ "RNA binding protein,transcription factor" HDGF-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF302VJW https://www.encodeproject.org/files/ENCFF302VJW/@@download/ENCFF302VJW.bam ENCFF875CHB https://www.encodeproject.org/files/ENCFF875CHB/@@download/ENCFF875CHB.bam 59.2 M 0 57.7 M 0.973 PE 100 100 native 25.3 M 0.0 M 23.8 M 0.804 0.94 0.94 16.63 215 1.08 7.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/be407878-8ce9-4c13-8b46-ed454998f475/@@download/cross_correlation_plot/ENCFF452DQUENCFF359OBA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB521RRA michael-snyder:L-3355 "ENCFF359OBA,ENCFF452DQU" HiSeq 4000 2017-04-08T23:59:04.989811+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05F803695VV512F0xZY3Q ENCSR522LDJ https://www.encodeproject.org/experiments/ENCSR522LDJ "RNA binding protein,transcription factor" HDGF-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF594ICG https://www.encodeproject.org/files/ENCFF594ICG/@@download/ENCFF594ICG.bam ENCFF262LCF https://www.encodeproject.org/files/ENCFF262LCF/@@download/ENCFF262LCF.bam 103.6 M 0 100.8 M 0.973 PE 100 100 native 44.4 M 0.0 M 41.0 M 0.791 0.92 0.92 12.49 190 1.05 5.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1362e0b-5eab-4f23-a1dd-6672e1f090ec/@@download/cross_correlation_plot/ENCFF060IWYENCFF006IUL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB264UCK michael-snyder:L-3356 "ENCFF060IWY,ENCFF006IUL" HiSeq 4000 2017-04-09T00:02:24.728263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05PQ03697FZkz103qkPKy ENCSR862PNL https://www.encodeproject.org/experiments/ENCSR862PNL transcription factor L3MBTL2-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF763WJE https://www.encodeproject.org/files/ENCFF763WJE/@@download/ENCFF763WJE.bam ENCFF219YXK https://www.encodeproject.org/files/ENCFF219YXK/@@download/ENCFF219YXK.bam 101.7 M 0 98.9 M 0.972 PE 100 100 native 43.3 M 0.0 M 35.5 M 0.697 0.82 0.82 5.32 225 1.14 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/e872c616-f3b0-47c7-bb1d-3a797261ce8d/@@download/cross_correlation_plot/ENCFF089HEDENCFF841ZWA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB534WWE michael-snyder:L-3048 "ENCFF841ZWA,ENCFF089HED" HiSeq 4000 2016-10-27T22:16:07.281046+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08by9Q03694q32PPxBJ6b3Y ENCSR862PNL https://www.encodeproject.org/experiments/ENCSR862PNL transcription factor L3MBTL2-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF517RCT https://www.encodeproject.org/files/ENCFF517RCT/@@download/ENCFF517RCT.bam ENCFF315CKY https://www.encodeproject.org/files/ENCFF315CKY/@@download/ENCFF315CKY.bam 124.3 M 0 121.1 M 0.975 PE 100 100 native 53.4 M 0.0 M 45.4 M 0.731 0.85 0.85 6.55 220 1.15 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/a08852bf-1dce-417b-b65d-8bcde023539c/@@download/cross_correlation_plot/ENCFF035MMHENCFF800CLX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB378WBH michael-snyder:L-3049 "ENCFF800CLX,ENCFF035MMH" HiSeq 4000 2016-10-27T22:18:12.768654+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08byJ00369GJ6xQfbB7F621 ENCSR240XWM https://www.encodeproject.org/experiments/ENCSR240XWM transcription factor LEF1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF457VMK https://www.encodeproject.org/files/ENCFF457VMK/@@download/ENCFF457VMK.bam ENCFF308AZK https://www.encodeproject.org/files/ENCFF308AZK/@@download/ENCFF308AZK.bam 74.1 M 0 66.7 M 0.900 PE 100 100 native 28.9 M 0.0 M 25.3 M 0.684 0.88 0.88 8.09 195 1.07 6.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7d9c038-4427-4806-80e2-667ae5ada369/@@download/cross_correlation_plot/ENCFF011PMDENCFF402LAV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB037WNN michael-snyder:L-3359 "ENCFF011PMD,ENCFF402LAV" HiSeq 4000 2017-04-09T00:00:03.513942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05Z00369K0f522FPBpgbj ENCSR240XWM https://www.encodeproject.org/experiments/ENCSR240XWM transcription factor LEF1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF889PAN https://www.encodeproject.org/files/ENCFF889PAN/@@download/ENCFF889PAN.bam ENCFF532EAY https://www.encodeproject.org/files/ENCFF532EAY/@@download/ENCFF532EAY.bam 143.6 M 0 136.2 M 0.948 PE 100 100 native 59.8 M 0.0 M 52.9 M 0.736 0.88 0.88 8.46 195 1.04 9.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba3d143d-e927-49ff-9281-df2a38b97c42/@@download/cross_correlation_plot/ENCFF192OJPENCFF291SHJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB444BYJ michael-snyder:L-3361 "ENCFF192OJP,ENCFF291SHJ" HiSeq 4000 2017-04-09T00:05:35.717113+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z05jQ03691VzFp4vyz2XQZ ENCSR997GPO https://www.encodeproject.org/experiments/ENCSR997GPO transcription factor NFRKB-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF271AMR https://www.encodeproject.org/files/ENCFF271AMR/@@download/ENCFF271AMR.bam ENCFF175EMG https://www.encodeproject.org/files/ENCFF175EMG/@@download/ENCFF175EMG.bam 104.9 M 0 101.8 M 0.970 PE 100 100 native 44.2 M 0.0 M 32.6 M 0.621 0.74 0.73 3.60 235 1.04 4.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/7abca6ec-a084-4e91-a142-55da21bb794f/@@download/cross_correlation_plot/ENCFF895OQIENCFF204LGU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB601WPB michael-snyder:L-3058 "ENCFF204LGU,ENCFF895OQI" HiSeq 4000 2016-10-27T22:10:19.807035+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08f0kj036923z1QYVBPp86x ENCSR997GPO https://www.encodeproject.org/experiments/ENCSR997GPO transcription factor NFRKB-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF284OXU https://www.encodeproject.org/files/ENCFF284OXU/@@download/ENCFF284OXU.bam ENCFF703HQU https://www.encodeproject.org/files/ENCFF703HQU/@@download/ENCFF703HQU.bam 113.9 M 0 110.4 M 0.970 PE 100 100 native 48.0 M 0.0 M 36.3 M 0.637 0.76 0.75 3.88 225 1.04 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/9cb0272e-4c7f-4e22-8a21-5b139d5ac36c/@@download/cross_correlation_plot/ENCFF390ZPTENCFF260XVE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB225TRA michael-snyder:L-3059 "ENCFF260XVE,ENCFF390ZPT" HiSeq 4000 2016-10-27T22:12:34.091464+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08f0x003697KPkyX9BPQF87 ENCSR233FAG https://www.encodeproject.org/experiments/ENCSR233FAG transcription factor PKNOX1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF995ZRC https://www.encodeproject.org/files/ENCFF995ZRC/@@download/ENCFF995ZRC.bam ENCFF125IYY https://www.encodeproject.org/files/ENCFF125IYY/@@download/ENCFF125IYY.bam 85.6 M 0 83.0 M 0.970 PE 100 100 native 35.5 M 0.0 M 33.9 M 0.791 0.95 0.95 21.89 200 1.58 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/56ce088b-9ee0-4780-9cfa-05295236c20a/@@download/cross_correlation_plot/ENCFF766EXHENCFF145TGH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB697AXU michael-snyder:L-3024 "ENCFF766EXH,ENCFF145TGH" HiSeq 2000 2016-10-27T22:35:00.386431+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfJQ03695YX1xgJBKFkXZ ENCSR233FAG https://www.encodeproject.org/experiments/ENCSR233FAG transcription factor PKNOX1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF364TGY https://www.encodeproject.org/files/ENCFF364TGY/@@download/ENCFF364TGY.bam ENCFF934PHO https://www.encodeproject.org/files/ENCFF934PHO/@@download/ENCFF934PHO.bam 101.1 M 0 98.5 M 0.974 PE 100 100 native 42.2 M 0.0 M 40.6 M 0.802 0.96 0.96 26.55 200 1.59 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe71e0fd-655c-4e80-b684-9c2e74ebf7c1/@@download/cross_correlation_plot/ENCFF859KHKENCFF341BBR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB837VPN michael-snyder:L-3025 "ENCFF341BBR,ENCFF859KHK" HiSeq 2000 2016-10-27T22:42:14.766320+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfQj0369PQyG3V5B4502p ENCSR906PEI https://www.encodeproject.org/experiments/ENCSR906PEI transcription factor SP1-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF065ZXS https://www.encodeproject.org/files/ENCFF065ZXS/@@download/ENCFF065ZXS.bam ENCFF845HUA https://www.encodeproject.org/files/ENCFF845HUA/@@download/ENCFF845HUA.bam 84.9 M 0 82.6 M 0.974 PE 100 100 native 36.4 M 0.0 M 33.6 M 0.792 0.92 0.92 13.02 190 1.05 3.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca52bf3a-39d9-4aff-8a61-878deb2591ef/@@download/cross_correlation_plot/ENCFF601UZAENCFF895TXD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB132SEO michael-snyder:L-3036 "ENCFF601UZA,ENCFF895TXD" HiSeq 2000 2016-10-27T22:22:00.500911+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bzJj0369GJ6xQfbB7F638 ENCSR906PEI https://www.encodeproject.org/experiments/ENCSR906PEI transcription factor SP1-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF144OSY https://www.encodeproject.org/files/ENCFF144OSY/@@download/ENCFF144OSY.bam ENCFF720UHQ https://www.encodeproject.org/files/ENCFF720UHQ/@@download/ENCFF720UHQ.bam 79.9 M 0 77.7 M 0.973 PE 100 100 native 33.9 M 0.0 M 31.7 M 0.795 0.94 0.94 15.57 205 1.05 4.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/c69846ed-87eb-47ec-843b-c78faa5ed28a/@@download/cross_correlation_plot/ENCFF955QVTENCFF653QNP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB082WSX michael-snyder:L-3038 "ENCFF653QNP,ENCFF955QVT" HiSeq 2000 2016-10-27T22:19:49.037548+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bzY00369GJ6xQfbB7F63j ENCSR090ZDO https://www.encodeproject.org/experiments/ENCSR090ZDO "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF835IGH https://www.encodeproject.org/files/ENCFF835IGH/@@download/ENCFF835IGH.bam ENCFF826MFW https://www.encodeproject.org/files/ENCFF826MFW/@@download/ENCFF826MFW.bam 106.8 M 0 102.8 M 0.963 PE 100 100 native 44.3 M 0.0 M 40.6 M 0.760 0.92 0.92 11.93 225 1.04 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/3464ea9d-761c-4485-b53c-6e745ebde365/@@download/cross_correlation_plot/ENCFF097JJWENCFF024XVW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB924BZQ michael-snyder:L-3052 "ENCFF097JJW,ENCFF024XVW" HiSeq 4000 2016-10-27T22:35:47.094819+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bX100369PQyG3V5B45006 ENCSR090ZDO https://www.encodeproject.org/experiments/ENCSR090ZDO "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF038DYY https://www.encodeproject.org/files/ENCFF038DYY/@@download/ENCFF038DYY.bam ENCFF913WBO https://www.encodeproject.org/files/ENCFF913WBO/@@download/ENCFF913WBO.bam 106.2 M 0 102.9 M 0.969 PE 100 100 native 44.8 M 0.0 M 39.9 M 0.752 0.89 0.89 9.03 240 1.03 4.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/49ba3c18-6042-4279-869b-2ccfcb90f880/@@download/cross_correlation_plot/ENCFF674QTVENCFF478YYA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB013ZSX michael-snyder:L-3053 "ENCFF478YYA,ENCFF674QTV" HiSeq 4000 2016-10-27T22:35:57.638421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bY3803695YX1xgJBKFkVb ENCSR753GIA https://www.encodeproject.org/experiments/ENCSR753GIA "RNA binding protein,transcription factor" TARDBP-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF592NOJ https://www.encodeproject.org/files/ENCFF592NOJ/@@download/ENCFF592NOJ.bam ENCFF092SQY https://www.encodeproject.org/files/ENCFF092SQY/@@download/ENCFF092SQY.bam 86.2 M 0 84.3 M 0.978 PE 100 100 native 37.0 M 0.0 M 35.7 M 0.827 0.97 0.97 29.06 195 1.05 3.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/67375b28-bf46-465e-806f-50feed050e84/@@download/cross_correlation_plot/ENCFF015SCZENCFF580QBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB010JHQ michael-snyder:L-3037 "ENCFF580QBV,ENCFF015SCZ" HiSeq 2000 2016-10-27T22:29:00.104682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bvP003694q32PPxBJ6b1z ENCSR753GIA https://www.encodeproject.org/experiments/ENCSR753GIA "RNA binding protein,transcription factor" TARDBP-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF158YRG https://www.encodeproject.org/files/ENCFF158YRG/@@download/ENCFF158YRG.bam ENCFF943PTK https://www.encodeproject.org/files/ENCFF943PTK/@@download/ENCFF943PTK.bam 61.5 M 0 59.9 M 0.973 PE 100 100 native 26.1 M 0.0 M 25.1 M 0.816 0.96 0.96 26.84 210 1.06 4.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f451f03-6199-47c2-b0bd-f70d8beedcd5/@@download/cross_correlation_plot/ENCFF514DNWENCFF290TCQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB370BLT michael-snyder:L-3039 "ENCFF514DNW,ENCFF290TCQ" HiSeq 2000 2016-10-27T22:25:04.912962+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bvX80369PQyG3V5B4505v ENCSR218GSN https://www.encodeproject.org/experiments/ENCSR218GSN transcription factor ZFX-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF136VHO https://www.encodeproject.org/files/ENCFF136VHO/@@download/ENCFF136VHO.bam ENCFF703UOS https://www.encodeproject.org/files/ENCFF703UOS/@@download/ENCFF703UOS.bam 131.8 M 0 129.1 M 0.979 PE 100 100 native 55.0 M 0.0 M 52.8 M 0.802 0.96 0.96 24.58 315 1.17 2.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/17585ebd-1a82-4aca-bb7d-8d4fd9aede0d/@@download/cross_correlation_plot/ENCFF664IIEENCFF292UBY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB463YWV michael-snyder:L-3091 "ENCFF292UBY,ENCFF664IIE" HiSeq 2000 2017-02-04T22:19:02.613340+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BX2fQ0369JpqfkG09Vg4pv ENCSR218GSN https://www.encodeproject.org/experiments/ENCSR218GSN transcription factor ZFX-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF798AWZ https://www.encodeproject.org/files/ENCFF798AWZ/@@download/ENCFF798AWZ.bam ENCFF886OBS https://www.encodeproject.org/files/ENCFF886OBS/@@download/ENCFF886OBS.bam 104.1 M 0 101.4 M 0.974 PE 100 100 native 43.1 M 0.0 M 40.6 M 0.780 0.94 0.94 16.51 345 1.12 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/3cb59cf6-a1f0-4998-8c3d-228b7b409334/@@download/cross_correlation_plot/ENCFF340SRUENCFF108LDP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB413YGP michael-snyder:L-3093 "ENCFF340SRU,ENCFF108LDP" HiSeq 2000 2017-02-04T22:15:56.296194+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BX2xQ03698Y174Fz56XY9X ENCSR882ICT https://www.encodeproject.org/experiments/ENCSR882ICT transcription factor ZNF384-human HEK293T immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF826JBZ https://www.encodeproject.org/files/ENCFF826JBZ/@@download/ENCFF826JBZ.bam ENCFF532KUU https://www.encodeproject.org/files/ENCFF532KUU/@@download/ENCFF532KUU.bam 95.4 M 0 92.4 M 0.968 PE 100 100 native 38.3 M 0.0 M 37.7 M 0.789 0.98 0.98 60.91 200 1.08 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/5efa6fc3-2084-4d7b-8727-939ae4b36958/@@download/cross_correlation_plot/ENCFF237IMGENCFF571ZGV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB055YTL michael-snyder:L-3040 "ENCFF237IMG,ENCFF571ZGV" HiSeq 2000 2016-10-27T22:27:45.680644+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08byyj0369GJ6xQfbB7F62f ENCSR882ICT https://www.encodeproject.org/experiments/ENCSR882ICT transcription factor ZNF384-human HEK293T immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF412ASO https://www.encodeproject.org/files/ENCFF412ASO/@@download/ENCFF412ASO.bam ENCFF181AMB https://www.encodeproject.org/files/ENCFF181AMB/@@download/ENCFF181AMB.bam 104.7 M 0 101.2 M 0.966 PE 100 100 native 41.6 M 0.0 M 40.3 M 0.769 0.97 0.97 31.50 205 1.07 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/571755e4-6f42-4e1c-ab0c-a593feb82c0e/@@download/cross_correlation_plot/ENCFF871PJGENCFF490PRK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB408LRK michael-snyder:L-3041 "ENCFF490PRK,ENCFF871PJG" HiSeq 2000 2016-10-27T22:31:42.836067+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bz2Q0369GJ6xQfbB7F62y ENCSR000EDB https://www.encodeproject.org/experiments/ENCSR000EDB transcription factor BRCA1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EDA https://www.encodeproject.org/experiments/ENCSR000EDA transcription factor CEBPB-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR392EAA https://www.encodeproject.org/experiments/ENCSR392EAA "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF869VHN https://www.encodeproject.org/files/ENCFF869VHN/@@download/ENCFF869VHN.bam ENCFF031ASD https://www.encodeproject.org/files/ENCFF031ASD/@@download/ENCFF031ASD.bam 23.7 M 0 23.2 M 0.978 SE 36 36 native 0.0 M 17.0 M 16.7 M 0.706 0.98 0.98 60.88 80 1.03 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/f697bc64-40d5-4eda-809b-26ebf656f2cc/@@download/cross_correlation_plot/ENCFF002EDI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB122EJO michael-snyder:CHD1_NB100-60411_HeLa-S3_Rep1 ENCFF002EDI Illumina Genome Analyzer IIx 2016-10-09T16:59:23.261373+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4FB00jv1g5yGjfvVx0P5P ENCSR392EAA https://www.encodeproject.org/experiments/ENCSR392EAA "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF830MXF https://www.encodeproject.org/files/ENCFF830MXF/@@download/ENCFF830MXF.bam ENCFF605PGG https://www.encodeproject.org/files/ENCFF605PGG/@@download/ENCFF605PGG.bam 15.8 M 0 15.2 M 0.960 SE 36 36 native 0.0 M 11.2 M 11.0 M 0.694 0.98 0.98 61.69 80 1.09 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5699481-2334-427a-8c37-b6a128ad37a7/@@download/cross_correlation_plot/ENCFF002EDJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB306NGN michael-snyder:CHD1_NB100-60411_HeLa-S3_Rep2 ENCFF002EDJ Illumina Genome Analyzer IIx 2016-10-09T16:59:12.071887+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4FF80jv1g5yGjfvVx0P5g ENCSR000ECP https://www.encodeproject.org/experiments/ENCSR000ECP "RNA binding protein,transcription factor" CHD2-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR580ECR https://www.encodeproject.org/experiments/ENCSR580ECR control Control-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF459QXO https://www.encodeproject.org/files/ENCFF459QXO/@@download/ENCFF459QXO.bam ENCFF388MUS https://www.encodeproject.org/files/ENCFF388MUS/@@download/ENCFF388MUS.bam 41.1 M 0 40.8 M 0.993 SE 36 36 None 0.0 M 31.8 M 29.9 M 0.727 0.95 0.95 20.58 110 1.02 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/600caf1e-a338-4610-9eba-6d1c9f401a62/@@download/cross_correlation_plot/ENCFF002ECN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB924ISO michael-snyder:Input_HelaS3_Rep1 ENCFF002ECN Illumina Genome Analyzer IIx 2016-05-06T18:10:14.165557+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQ28036961GyjjQ2QP8XV ENCSR580ECR https://www.encodeproject.org/experiments/ENCSR580ECR control Control-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF714ZPY https://www.encodeproject.org/files/ENCFF714ZPY/@@download/ENCFF714ZPY.bam ENCFF469FYX https://www.encodeproject.org/files/ENCFF469FYX/@@download/ENCFF469FYX.bam 42.2 M 0 41.9 M 0.993 SE 36 36 None 0.0 M 32.9 M 30.3 M 0.718 0.93 0.93 14.30 125 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/7441163c-002a-4274-b433-ad55c93e027d/@@download/cross_correlation_plot/ENCFF002ECO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB745WWJ michael-snyder:Input_HelaS3_Rep2 ENCFF002ECO Illumina Genome Analyzer IIx 2016-05-06T18:09:54.323479+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQ40036986q4kkQ2Q0KZq ENCSR760PBD https://www.encodeproject.org/experiments/ENCSR760PBD control Control-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF586NUV https://www.encodeproject.org/files/ENCFF586NUV/@@download/ENCFF586NUV.bam ENCFF040LFH https://www.encodeproject.org/files/ENCFF040LFH/@@download/ENCFF040LFH.bam 96.0 M 0 94.4 M 0.983 PE 100 100 None 42.0 M 0.0 M 39.0 M 0.813 0.94 0.93 15.26 240 1.05 6.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/258c8826-9a96-4ded-9c53-6dd791f93745/@@download/cross_correlation_plot/ENCFF002EFJENCFF002EFK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB144SAX michael-snyder:744_B_TruSeq_TTAGGC "ENCFF002EFJ,ENCFF002EFK" HiSeq 2000 2016-05-06T18:13:17.407687+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqYx8036961GyjjQ2QP8kJ ENCSR760PBD https://www.encodeproject.org/experiments/ENCSR760PBD control Control-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF386EWJ https://www.encodeproject.org/files/ENCFF386EWJ/@@download/ENCFF386EWJ.bam ENCFF240VRC https://www.encodeproject.org/files/ENCFF240VRC/@@download/ENCFF240VRC.bam 112.0 M 0 108.9 M 0.972 PE 100 100 None 48.3 M 0.0 M 35.7 M 0.637 0.74 0.75 4.02 210 1.07 7.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/5870f5ca-e36b-4b7b-af89-48c0e7459624/@@download/cross_correlation_plot/ENCFF002EFOENCFF002EFN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB007GPJ michael-snyder:744_B_TruSeq_TGACCA "ENCFF002EFO,ENCFF002EFN" HiSeq 2000 2016-05-06T18:16:33.155713+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqYz80369GkFPvq42zg1qQ ENCSR760PBD https://www.encodeproject.org/experiments/ENCSR760PBD control Control-human HeLa-S3 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF456PZV https://www.encodeproject.org/files/ENCFF456PZV/@@download/ENCFF456PZV.bam ENCFF961VPD https://www.encodeproject.org/files/ENCFF961VPD/@@download/ENCFF961VPD.bam 56.7 M 0 55.3 M 0.975 PE 100 100 None 24.4 M 0.0 M 22.7 M 0.802 0.93 0.93 14.55 185 1.10 12.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/83bc836a-3dbe-4c42-a899-5690709acffa/@@download/cross_correlation_plot/ENCFF002EIRENCFF002EIO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB877YFR michael-snyder:793_B_TruSeq_TGACCA "ENCFF002EIO,ENCFF002EIR" HiSeq 2000 2016-05-06T18:07:29.807597+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqZ1003692Fy2Pk02vGVbF ENCSR219MKK https://www.encodeproject.org/experiments/ENCSR219MKK "RNA binding protein,transcription factor" DEK-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF775QWE https://www.encodeproject.org/files/ENCFF775QWE/@@download/ENCFF775QWE.bam ENCFF920UPM https://www.encodeproject.org/files/ENCFF920UPM/@@download/ENCFF920UPM.bam 17.0 M 0 16.8 M 0.991 SE 36 36 native 0.0 M 13.2 M 13.1 M 0.769 0.99 0.99 83.89 100 1.06 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/4bf99f6a-b237-4b0c-b03b-3432253a61f4/@@download/cross_correlation_plot/ENCFF002EWX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB092IEW michael-snyder:DEK_NB100-61057_HeLa-S3_Rep1 ENCFF002EWX Illumina Genome Analyzer IIx 2016-10-09T17:04:35.017992+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69z00jv1Y68V4KG8yz39Q ENCSR219MKK https://www.encodeproject.org/experiments/ENCSR219MKK "RNA binding protein,transcription factor" DEK-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF855UFW https://www.encodeproject.org/files/ENCFF855UFW/@@download/ENCFF855UFW.bam ENCFF535ZQH https://www.encodeproject.org/files/ENCFF535ZQH/@@download/ENCFF535ZQH.bam 29.7 M 0 29.5 M 0.993 SE 36 36 native 0.0 M 22.7 M 22.1 M 0.742 0.97 0.97 39.46 115 1.03 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0f2288f-7079-4e9f-b24b-ab59617c9afb/@@download/cross_correlation_plot/ENCFF002EXE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB051HUK michael-snyder:DEK_NB100-61057_HeLa-S3_Rep2 ENCFF002EXE Illumina Genome Analyzer IIx 2016-10-09T17:05:12.247576+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6B100jv1Y68V4KG8yz39k ENCSR000ECI https://www.encodeproject.org/experiments/ENCSR000ECI transcription factor ELK1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECV https://www.encodeproject.org/experiments/ENCSR000ECV transcription factor EP300-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECZ https://www.encodeproject.org/experiments/ENCSR000ECZ "RNA binding protein,transcription factor" GTF2F1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECH https://www.encodeproject.org/experiments/ENCSR000ECH transcription factor HCFC1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EDF https://www.encodeproject.org/experiments/ENCSR000EDF transcription factor IRF3-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EDG https://www.encodeproject.org/experiments/ENCSR000EDG transcription factor JUN-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EDH https://www.encodeproject.org/experiments/ENCSR000EDH transcription factor JUND-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000ECR https://www.encodeproject.org/experiments/ENCSR000ECR transcription factor KAT2A-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR140DSL https://www.encodeproject.org/experiments/ENCSR140DSL transcription factor MAFF-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF387WOS https://www.encodeproject.org/files/ENCFF387WOS/@@download/ENCFF387WOS.bam ENCFF732HFY https://www.encodeproject.org/files/ENCFF732HFY/@@download/ENCFF732HFY.bam 36.0 M 0 35.5 M 0.985 SE 36 36 native 0.0 M 28.0 M 26.1 M 0.724 0.94 0.94 15.63 120 1.12 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d111859-91e8-44d9-84c5-d142aaf3b662/@@download/cross_correlation_plot/ENCFF002EDH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB748YJS michael-snyder:MafF_M8194_Hela S3_Rep2 ENCFF002EDH Illumina Genome Analyzer IIx 2016-10-09T17:32:31.305860+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv60Zj0jv1xPyfX78Yz4jVj ENCSR140DSL https://www.encodeproject.org/experiments/ENCSR140DSL transcription factor MAFF-human HeLa-S3 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF010EXG https://www.encodeproject.org/files/ENCFF010EXG/@@download/ENCFF010EXG.bam ENCFF145LHC https://www.encodeproject.org/files/ENCFF145LHC/@@download/ENCFF145LHC.bam 30.8 M 0 30.4 M 0.988 SE 36 36 native 0.0 M 23.4 M 23.0 M 0.746 0.98 0.98 67.26 100 1.10 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7689bb7-b6d8-4990-a639-dee2606c65e6/@@download/cross_correlation_plot/ENCFF002EDF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB694OHW michael-snyder:MafF_M8194_Hela S3_Rep3 ENCFF002EDF Illumina Genome Analyzer IIx 2016-10-09T17:31:53.553016+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv60fQ0jv1XvFGkBjjfjQzV ENCSR000ECK https://www.encodeproject.org/experiments/ENCSR000ECK transcription factor MAFK-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF161SWW https://www.encodeproject.org/files/ENCFF161SWW/@@download/ENCFF161SWW.bam ENCFF980RDW https://www.encodeproject.org/files/ENCFF980RDW/@@download/ENCFF980RDW.bam 35.1 M 0 34.7 M 0.987 SE 36 27 27 0.0 M 25.0 M 23.2 M 0.660 0.93 0.93 14.54 110 1.12 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad50f435-b2a1-4310-92c8-6dbc58d827de/@@download/cross_correlation_plot/ENCFF000XGV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVB ENCFF000XGV Illumina Genome Analyzer 2016-10-28T23:09:03.023232+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042PjQ0jv1fzQK28j35Fq03 ENCSR000ECK https://www.encodeproject.org/experiments/ENCSR000ECK transcription factor MAFK-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF311TXI https://www.encodeproject.org/files/ENCFF311TXI/@@download/ENCFF311TXI.bam ENCFF980RDW https://www.encodeproject.org/files/ENCFF980RDW/@@download/ENCFF980RDW.bam 35.1 M 0 34.5 M 0.983 SE 36 36 native 0.0 M 26.9 M 25.0 M 0.710 0.93 0.93 14.67 110 1.11 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9d4744e-dd1b-4b9a-90ab-758b9fc97c2f/@@download/cross_correlation_plot/ENCFF000XGV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVB ENCFF000XGV Illumina Genome Analyzer 2016-10-09T17:01:13.356109+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46zQ0jv1vY92b0GYjVFxk ENCSR000ECK https://www.encodeproject.org/experiments/ENCSR000ECK transcription factor MAFK-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF490YHN https://www.encodeproject.org/files/ENCFF490YHN/@@download/ENCFF490YHN.bam ENCFF322ANK https://www.encodeproject.org/files/ENCFF322ANK/@@download/ENCFF322ANK.bam 22.2 M 0 22.0 M 0.992 SE 36 27 27 0.0 M 15.2 M 14.7 M 0.664 0.98 0.98 40.85 100 1.08 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/62205d96-b7ac-4ef6-8c35-d47960afb4b3/@@download/cross_correlation_plot/ENCFF000XGX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALU ENCFF000XGX Illumina Genome Analyzer 2016-10-28T23:09:36.288671+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042Pp80jv1YfqZYX43J0JpZ ENCSR000ECK https://www.encodeproject.org/experiments/ENCSR000ECK transcription factor MAFK-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF982EYL https://www.encodeproject.org/files/ENCFF982EYL/@@download/ENCFF982EYL.bam ENCFF322ANK https://www.encodeproject.org/files/ENCFF322ANK/@@download/ENCFF322ANK.bam 22.2 M 0 21.9 M 0.987 SE 36 36 native 0.0 M 16.4 M 15.9 M 0.719 0.98 0.98 41.16 100 1.07 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e75e762-f9a2-42b7-9a75-eb49f7a68bc4/@@download/cross_correlation_plot/ENCFF000XGX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALU ENCFF000XGX Illumina Genome Analyzer 2016-10-09T16:54:17.072072+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47100jv1XvFGkBjjfjQK6 ENCSR000ECN https://www.encodeproject.org/experiments/ENCSR000ECN transcription factor MAX-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECL https://www.encodeproject.org/experiments/ENCSR000ECL "RNA binding protein,transcription factor" MAZ-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer II unreviewed ENCSR000ECU https://www.encodeproject.org/experiments/ENCSR000ECU transcription factor MXI1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR707IUN https://www.encodeproject.org/experiments/ENCSR707IUN transcription factor NFE2L2-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF686TXK https://www.encodeproject.org/files/ENCFF686TXK/@@download/ENCFF686TXK.bam ENCFF752BNX https://www.encodeproject.org/files/ENCFF752BNX/@@download/ENCFF752BNX.bam 25.4 M 0 24.8 M 0.977 SE 36 36 native 0.0 M 18.6 M 17.9 M 0.704 0.97 0.97 29.47 110 1.09 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb8f9130-9680-4bcb-aa7a-b3c0f7bf5b0d/@@download/cross_correlation_plot/ENCFF002EVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB718DTE michael-snyder:NRF2_sc-13032_HeLa-S3_Rep1 ENCFF002EVN Illumina Genome Analyzer IIx 2016-10-09T17:08:40.678936+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k400jv1vY92b0GYjVFV7 ENCSR707IUN https://www.encodeproject.org/experiments/ENCSR707IUN transcription factor NFE2L2-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF068LXE https://www.encodeproject.org/files/ENCFF068LXE/@@download/ENCFF068LXE.bam ENCFF056UJQ https://www.encodeproject.org/files/ENCFF056UJQ/@@download/ENCFF056UJQ.bam 30.8 M 0 30.3 M 0.985 SE 36 36 native 0.0 M 22.3 M 21.9 M 0.711 0.98 0.98 62.29 110 1.06 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/70f43fcb-56e7-4e1d-b1ef-f4452c489d04/@@download/cross_correlation_plot/ENCFF002EVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB850SFR michael-snyder:NRF2_sc-13032_HeLa-S3_Rep2 ENCFF002EVQ Illumina Genome Analyzer IIx 2016-10-09T17:07:56.973538+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k5Q0jv1g5yGjfvVx0KZy ENCSR000EDJ https://www.encodeproject.org/experiments/ENCSR000EDJ transcription factor NRF1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000ECT https://www.encodeproject.org/experiments/ENCSR000ECT "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECY https://www.encodeproject.org/experiments/ENCSR000ECY transcription factor PRDM1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EDI https://www.encodeproject.org/experiments/ENCSR000EDI control rabbit-IgG-control-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF436WVQ https://www.encodeproject.org/files/ENCFF436WVQ/@@download/ENCFF436WVQ.bam ENCFF276BNG https://www.encodeproject.org/files/ENCFF276BNG/@@download/ENCFF276BNG.bam 55.9 M 0 43.9 M 0.786 SE 27 27 native 0.0 M 29.2 M 27.1 M 0.486 0.93 0.93 15.14 140 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/17002390-beb7-48ec-a69b-5e99a9a6ed56/@@download/cross_correlation_plot/ENCFF000XKW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFI ENCFF000XKW Illumina Genome Analyzer 2016-10-29T18:04:26.601103+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xyV00jv1xgG4ppJK6q09Z ENCSR000EDE https://www.encodeproject.org/experiments/ENCSR000EDE transcription factor RAD21-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECM https://www.encodeproject.org/experiments/ENCSR000ECM transcription factor RCOR1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECX https://www.encodeproject.org/experiments/ENCSR000ECX transcription factor RFX5-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EDK https://www.encodeproject.org/experiments/ENCSR000EDK transcription factor SMARCB1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE "28,29" Illumina Genome Analyzer unreviewed ENCSR000EDM https://www.encodeproject.org/experiments/ENCSR000EDM transcription factor SMARCC1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EDL https://www.encodeproject.org/experiments/ENCSR000EDL transcription factor SMARCC2-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000ECS https://www.encodeproject.org/experiments/ENCSR000ECS transcription factor SMC3-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR611WZO https://www.encodeproject.org/experiments/ENCSR611WZO transcription factor SREBF2-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF833PBO https://www.encodeproject.org/files/ENCFF833PBO/@@download/ENCFF833PBO.bam ENCFF441RUG https://www.encodeproject.org/files/ENCFF441RUG/@@download/ENCFF441RUG.bam 85.1 M 0 83.0 M 0.975 PE 100 100 native 36.8 M 0.0 M 34.2 M 0.804 0.93 0.93 14.21 235 1.07 6.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4bded7a-dcb8-4ca2-ab8f-de8a53bbc01b/@@download/cross_correlation_plot/ENCFF002EHYENCFF002DOU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB716JPW michael-snyder:744_A_TruSeq_TGACCA "ENCFF002EHY,ENCFF002DOU" HiSeq 2000 2016-10-09T17:40:24.693355+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv60900jv1XpBpGXQxqxYGq ENCSR611WZO https://www.encodeproject.org/experiments/ENCSR611WZO transcription factor SREBF2-human HeLa-S3 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF769PJV https://www.encodeproject.org/files/ENCFF769PJV/@@download/ENCFF769PJV.bam ENCFF036OCJ https://www.encodeproject.org/files/ENCFF036OCJ/@@download/ENCFF036OCJ.bam 88.0 M 0 85.4 M 0.971 PE 100 100 native 38.0 M 0.0 M 32.8 M 0.747 0.87 0.86 7.25 240 1.07 6.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c1112bc-960b-46f5-8b92-5fee09b8b88e/@@download/cross_correlation_plot/ENCFF002EHZENCFF002EIE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB550FJX michael-snyder:744_A_TruSeq_ATCACG "ENCFF002EIE,ENCFF002EHZ" HiSeq 2000 2016-10-09T17:40:47.952398+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv60F80jv1YFyQ90J3z9yXy ENCSR000EDC https://www.encodeproject.org/experiments/ENCSR000EDC transcription factor STAT3-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EDD https://www.encodeproject.org/experiments/ENCSR000EDD transcription factor TBP-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR634ZGP https://www.encodeproject.org/experiments/ENCSR634ZGP transcription factor UBTF-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF913BSN https://www.encodeproject.org/files/ENCFF913BSN/@@download/ENCFF913BSN.bam ENCFF161HJC https://www.encodeproject.org/files/ENCFF161HJC/@@download/ENCFF161HJC.bam 86.1 M 0 74.3 M 0.864 PE 100 100 native 32.6 M 0.0 M 19.0 M 0.441 0.58 0.57 2.25 185 1.08 4.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/672d1432-8500-4e86-b97a-d80de4aed749/@@download/cross_correlation_plot/ENCFF514VXTENCFF336PPY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB262IWG michael-snyder:L-346 "ENCFF514VXT,ENCFF336PPY" HiSeq 2000 2016-10-09T17:25:21.128301+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67Xj0jv1xFKXGVbpg0QGf ENCSR634ZGP https://www.encodeproject.org/experiments/ENCSR634ZGP transcription factor UBTF-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF960WSN https://www.encodeproject.org/files/ENCFF960WSN/@@download/ENCFF960WSN.bam ENCFF291TXE https://www.encodeproject.org/files/ENCFF291TXE/@@download/ENCFF291TXE.bam 72.4 M 0 71.4 M 0.986 PE 100 100 native 32.0 M 0.0 M 29.0 M 0.802 0.91 0.91 10.67 190 1.07 11.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc640a19-dea8-42a8-b3f7-b4e7653b2759/@@download/cross_correlation_plot/ENCFF383KIYENCFF255DXC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB996KYG michael-snyder:L-542 "ENCFF383KIY,ENCFF255DXC" HiSeq 2000 2016-10-09T17:25:24.857681+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67Zj0jv1fXGPZpVVpjYVV ENCSR000ECW https://www.encodeproject.org/experiments/ENCSR000ECW transcription factor USF2-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR887MXT https://www.encodeproject.org/experiments/ENCSR887MXT transcription factor ZHX1-human HeLa-S3 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF683FRP https://www.encodeproject.org/files/ENCFF683FRP/@@download/ENCFF683FRP.bam ENCFF438YHM https://www.encodeproject.org/files/ENCFF438YHM/@@download/ENCFF438YHM.bam 29.5 M 0 28.6 M 0.972 SE 36 36 native 0.0 M 21.5 M 21.0 M 0.712 0.98 0.98 46.78 80 1.03 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6974431-cd1f-4a72-89a0-761f91aa8c8d/@@download/cross_correlation_plot/ENCFF002EDK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB882SCY michael-snyder:ZHX1_NB600-244A_HeLa-S3_Rep1 ENCFF002EDK Illumina Genome Analyzer IIx 2016-10-09T17:08:47.046367+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jx80jv1f60PxyZ9JGKp2 ENCSR887MXT https://www.encodeproject.org/experiments/ENCSR887MXT transcription factor ZHX1-human HeLa-S3 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF509RDA https://www.encodeproject.org/files/ENCFF509RDA/@@download/ENCFF509RDA.bam ENCFF724HJN https://www.encodeproject.org/files/ENCFF724HJN/@@download/ENCFF724HJN.bam 28.5 M 0 28.1 M 0.986 SE 36 36 native 0.0 M 20.8 M 19.9 M 0.698 0.96 0.96 23.51 110 1.03 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/20607d89-8cc4-4cac-bd77-67cc482d59c7/@@download/cross_correlation_plot/ENCFF002EDM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB755KTK michael-snyder:ZHX1_NB600-244A_HeLa-S3_Rep2 ENCFF002EDM Illumina Genome Analyzer IIx 2016-10-09T17:07:55.828997+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jyQ0jv1vY92b0GYjVFQb ENCSR000ECJ https://www.encodeproject.org/experiments/ENCSR000ECJ transcription factor ZKSCAN1-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000ECO https://www.encodeproject.org/experiments/ENCSR000ECO transcription factor ZNF143-human HeLa-S3 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EDP https://www.encodeproject.org/experiments/ENCSR000EDP transcription factor ARID3A-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF192DDJ https://www.encodeproject.org/files/ENCFF192DDJ/@@download/ENCFF192DDJ.bam ENCFF487RHK https://www.encodeproject.org/files/ENCFF487RHK/@@download/ENCFF487RHK.bam 23.9 M 0 23.7 M 0.990 SE 36 36 native 0.0 M 18.4 M 17.9 M 0.749 0.97 0.97 39.11 115 1.08 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f9ef58d-6943-4ad0-8256-deaccbf55d38/@@download/cross_correlation_plot/ENCFF000XOS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJV ENCFF000XOS Illumina Genome Analyzer 2016-12-10T21:00:41.920032+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1632v803692f1gp513PxgG7 ENCSR000EDP https://www.encodeproject.org/experiments/ENCSR000EDP transcription factor ARID3A-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF065BJO https://www.encodeproject.org/files/ENCFF065BJO/@@download/ENCFF065BJO.bam ENCFF535LHT https://www.encodeproject.org/files/ENCFF535LHT/@@download/ENCFF535LHT.bam 23.8 M 0 23.4 M 0.981 SE 36 36 native 0.0 M 18.0 M 17.5 M 0.734 0.98 0.98 43.97 115 1.13 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/84738f50-fce4-4c81-a87d-c29f78795cc5/@@download/cross_correlation_plot/ENCFF000XOU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJW ENCFF000XOU Illumina Genome Analyzer 2016-12-10T21:00:02.633303+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16331j0369KbxV61z4GFv7K ENCSR029IBC https://www.encodeproject.org/experiments/ENCSR029IBC transcription factor ARNT-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF476CCE https://www.encodeproject.org/files/ENCFF476CCE/@@download/ENCFF476CCE.bam ENCFF469CIQ https://www.encodeproject.org/files/ENCFF469CIQ/@@download/ENCFF469CIQ.bam 66.7 M 0 64.7 M 0.970 PE 100 100 native 27.7 M 0.0 M 27.1 M 0.813 0.98 0.98 47.17 205 1.06 5.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/399b79d6-9520-47cf-9551-228e43525caf/@@download/cross_correlation_plot/ENCFF481UNMENCFF110AZC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB620BZF michael-snyder:L-1906 "ENCFF110AZC,ENCFF481UNM" HiSeq 2000 2017-01-28T05:05:32.279796+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k2Yj03690QKBV65qQ3vFb ENCSR029IBC https://www.encodeproject.org/experiments/ENCSR029IBC transcription factor ARNT-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF949KJV https://www.encodeproject.org/files/ENCFF949KJV/@@download/ENCFF949KJV.bam ENCFF464YVO https://www.encodeproject.org/files/ENCFF464YVO/@@download/ENCFF464YVO.bam 84.6 M 0 82.4 M 0.974 PE 100 100 native 35.6 M 0.0 M 35.0 M 0.828 0.98 0.98 62.85 200 1.04 3.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/32111964-79fa-4683-a0b2-e4184eb13d8b/@@download/cross_correlation_plot/ENCFF906JOBENCFF992YHZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB845RQW michael-snyder:L-1907 "ENCFF992YHZ,ENCFF906JOB" HiSeq 2000 2017-01-28T05:08:40.284621+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k2k803695Q259664kQvy8 ENCSR047BUZ https://www.encodeproject.org/experiments/ENCSR047BUZ transcription factor ATF2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF091QWO https://www.encodeproject.org/files/ENCFF091QWO/@@download/ENCFF091QWO.bam ENCFF254MCO https://www.encodeproject.org/files/ENCFF254MCO/@@download/ENCFF254MCO.bam 55.9 M 0 54.6 M 0.976 PE 100 100 native 23.8 M 0.0 M 22.6 M 0.809 0.95 0.95 20.40 210 1.80 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/30e283e0-8b43-471f-8784-e9d62da7930f/@@download/cross_correlation_plot/ENCFF843QDRENCFF929RZN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB668UTD michael-snyder:L-1912 "ENCFF929RZN,ENCFF843QDR" HiSeq 2000 2017-01-25T23:37:47.427890+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9KQ0369192FJ8V9vk3vB ENCSR047BUZ https://www.encodeproject.org/experiments/ENCSR047BUZ transcription factor ATF2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF694VBR https://www.encodeproject.org/files/ENCFF694VBR/@@download/ENCFF694VBR.bam ENCFF213BPX https://www.encodeproject.org/files/ENCFF213BPX/@@download/ENCFF213BPX.bam 67.0 M 0 64.9 M 0.970 PE 100 100 native 27.9 M 0.0 M 26.8 M 0.802 0.96 0.96 25.80 205 1.14 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/890eeaa9-b9ce-47f6-bee5-d34f67f929b8/@@download/cross_correlation_plot/ENCFF588IKSENCFF461VFX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB885QIC michael-snyder:L-1913 "ENCFF588IKS,ENCFF461VFX" HiSeq 2000 2017-01-26T00:56:23.446510+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBXQ0369F2pz096jxpgBV ENCSR536MGS https://www.encodeproject.org/experiments/ENCSR536MGS transcription factor ATF4-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR545FXC https://www.encodeproject.org/experiments/ENCSR545FXC transcription factor ATF7-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF960PYI https://www.encodeproject.org/files/ENCFF960PYI/@@download/ENCFF960PYI.bam ENCFF139HSZ https://www.encodeproject.org/files/ENCFF139HSZ/@@download/ENCFF139HSZ.bam 75.8 M 0 73.3 M 0.966 PE 100 100 native 30.9 M 0.0 M 30.2 M 0.798 0.98 0.98 44.74 205 1.16 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/c84a9286-988d-47ec-bb6e-ccb31d48b984/@@download/cross_correlation_plot/ENCFF363RMPENCFF502XNK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB541RLZ michael-snyder:L-1742 "ENCFF502XNK,ENCFF363RMP" HiSeq 2000 2017-01-26T01:32:44.094496+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9F80369345F196JqzXJ1 ENCSR545FXC https://www.encodeproject.org/experiments/ENCSR545FXC transcription factor ATF7-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF833WHB https://www.encodeproject.org/files/ENCFF833WHB/@@download/ENCFF833WHB.bam ENCFF654CBN https://www.encodeproject.org/files/ENCFF654CBN/@@download/ENCFF654CBN.bam 67.5 M 0 65.3 M 0.968 PE 100 100 native 27.9 M 0.0 M 27.2 M 0.807 0.98 0.98 43.50 205 1.15 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a57b210-94ea-402e-82dc-bd2cdb5c7fde/@@download/cross_correlation_plot/ENCFF960KMNENCFF278TLH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB808GIN michael-snyder:L-1743 "ENCFF278TLH,ENCFF960KMN" HiSeq 2000 2017-01-26T00:45:04.556587+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBK80369345F196JqzXK3 ENCSR859JGF https://www.encodeproject.org/experiments/ENCSR859JGF transcription factor ATM-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF044TWJ https://www.encodeproject.org/files/ENCFF044TWJ/@@download/ENCFF044TWJ.bam ENCFF943LYC https://www.encodeproject.org/files/ENCFF943LYC/@@download/ENCFF943LYC.bam 71.4 M 0 69.0 M 0.966 PE 100 100 native 29.2 M 0.0 M 28.9 M 0.809 0.99 0.99 111.88 215 1.05 4.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d13b5e8-bc8d-48a2-a724-5793a03a8fb0/@@download/cross_correlation_plot/ENCFF655ZKUENCFF998ZXC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB705TVR michael-snyder:L-1822 "ENCFF655ZKU,ENCFF998ZXC" HiSeq 2000 2016-10-09T17:12:07.189765+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kz00jv1f60PxyZ9JGKqF ENCSR859JGF https://www.encodeproject.org/experiments/ENCSR859JGF transcription factor ATM-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF844MJH https://www.encodeproject.org/files/ENCFF844MJH/@@download/ENCFF844MJH.bam ENCFF988FYL https://www.encodeproject.org/files/ENCFF988FYL/@@download/ENCFF988FYL.bam 61.8 M 0 59.9 M 0.970 PE 100 100 native 25.6 M 0.0 M 22.8 M 0.737 0.89 0.89 8.73 205 1.06 4.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/77e448c4-4fb0-46f7-aee5-b7fe3f907d29/@@download/cross_correlation_plot/ENCFF700HESENCFF766JQJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB787CUA michael-snyder:L-1823 "ENCFF700HES,ENCFF766JQJ" HiSeq 2000 2016-10-09T17:11:10.538115+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3p0Q0jv1XvFGkBjjfjPzQ ENCSR015TKV https://www.encodeproject.org/experiments/ENCSR015TKV "RNA binding protein,transcription factor" BCLAF1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF207SAV https://www.encodeproject.org/files/ENCFF207SAV/@@download/ENCFF207SAV.bam ENCFF469EUD https://www.encodeproject.org/files/ENCFF469EUD/@@download/ENCFF469EUD.bam 88.6 M 0 85.2 M 0.961 PE 100 100 native 36.3 M 0.0 M 32.9 M 0.743 0.91 0.91 10.49 140 1.05 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/65da6849-88f4-4f87-8a22-aea5fdbe045c/@@download/cross_correlation_plot/ENCFF774IAMENCFF090URG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB818GYL michael-snyder:L-3366 "ENCFF774IAM,ENCFF090URG" HiSeq 4000 2017-04-19T10:55:21.749594+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q81k003698VgJZ4Fy12GzB ENCSR015TKV https://www.encodeproject.org/experiments/ENCSR015TKV "RNA binding protein,transcription factor" BCLAF1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF939EOP https://www.encodeproject.org/files/ENCFF939EOP/@@download/ENCFF939EOP.bam ENCFF731ADB https://www.encodeproject.org/files/ENCFF731ADB/@@download/ENCFF731ADB.bam 96.8 M 0 92.6 M 0.956 PE 100 100 native 39.4 M 0.0 M 34.5 M 0.712 0.87 0.87 7.83 140 1.05 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/61d029e1-fd2e-465a-82cb-f628e9755ea6/@@download/cross_correlation_plot/ENCFF383GYIENCFF696OAD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB346QBW michael-snyder:L-3367 "ENCFF383GYI,ENCFF696OAD" HiSeq 4000 2017-04-19T10:55:34.388032+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q826Q03692362PBZ95x0B6 ENCSR000EDT https://www.encodeproject.org/experiments/ENCSR000EDT transcription factor BHLHE40-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF028WLP https://www.encodeproject.org/files/ENCFF028WLP/@@download/ENCFF028WLP.bam ENCFF029PGR https://www.encodeproject.org/files/ENCFF029PGR/@@download/ENCFF029PGR.bam 27.3 M 0 26.9 M 0.986 SE 36 36 native 0.0 M 20.4 M 19.9 M 0.727 0.98 0.98 56.13 120 1.19 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/0cbe1620-a38d-4060-bf74-02f62b570d82/@@download/cross_correlation_plot/ENCFF000XPA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APW ENCFF000XPA Illumina Genome Analyzer 2016-12-11T03:28:56.654796+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Xy003699K237J9jY9kvj ENCSR000EDT https://www.encodeproject.org/experiments/ENCSR000EDT transcription factor BHLHE40-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF578TRZ https://www.encodeproject.org/files/ENCFF578TRZ/@@download/ENCFF578TRZ.bam ENCFF367DUJ https://www.encodeproject.org/files/ENCFF367DUJ/@@download/ENCFF367DUJ.bam 27.7 M 0 26.9 M 0.973 SE 36 36 native 0.0 M 20.4 M 19.8 M 0.715 0.97 0.98 48.64 110 1.17 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c19b0b2-2ad2-434e-aa36-47e6679efa2c/@@download/cross_correlation_plot/ENCFF000XPC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANI ENCFF000XPC Illumina Genome Analyzer 2016-12-11T03:31:10.911029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Y2j0369KQ3Yk1yz1kgVZ ENCSR000EDY https://www.encodeproject.org/experiments/ENCSR000EDY transcription factor BRCA1-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF134KPW https://www.encodeproject.org/files/ENCFF134KPW/@@download/ENCFF134KPW.bam ENCFF230XGL https://www.encodeproject.org/files/ENCFF230XGL/@@download/ENCFF230XGL.bam 20.3 M 0 18.8 M 0.927 SE 36 36 native 0.0 M 13.9 M 13.7 M 0.676 0.99 0.99 85.06 110 1.04 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/e600d5a3-dc0d-49d6-813d-7e18dfc949a6/@@download/cross_correlation_plot/ENCFF000XPL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKE ENCFF000XPL Illumina Genome Analyzer 2016-12-10T22:20:14.454430+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Q600369PJ8BP63qf1FbJ ENCSR000EDY https://www.encodeproject.org/experiments/ENCSR000EDY transcription factor BRCA1-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF699JHR https://www.encodeproject.org/files/ENCFF699JHR/@@download/ENCFF699JHR.bam ENCFF381UHY https://www.encodeproject.org/files/ENCFF381UHY/@@download/ENCFF381UHY.bam 31.7 M 0 27.8 M 0.877 SE 36 36 native 0.0 M 20.6 M 20.3 M 0.640 0.99 0.99 85.69 115 1.03 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/875a52ab-7fee-41d3-ae82-b3106d6bbdfb/@@download/cross_correlation_plot/ENCFF000XPS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUS ENCFF000XPS Illumina Genome Analyzer 2016-12-11T00:06:27.091890+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163QBQ03699Z3Y8493qbpv6 ENCSR000EEE https://www.encodeproject.org/experiments/ENCSR000EEE transcription factor CEBPB-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF677PSB https://www.encodeproject.org/files/ENCFF677PSB/@@download/ENCFF677PSB.bam ENCFF270RFR https://www.encodeproject.org/files/ENCFF270RFR/@@download/ENCFF270RFR.bam 18.9 M 0 17.7 M 0.939 SE 36 36 native 0.0 M 13.2 M 12.4 M 0.654 0.94 0.95 25.11 100 2.59 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/294b8164-ffad-454f-9554-c6fea77af74f/@@download/cross_correlation_plot/ENCFF000XQM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVK ENCFF000XQM Illumina Genome Analyzer 2016-12-12T17:20:47.723941+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1620b803692pJ09J76g5fZ7 ENCSR000EEE https://www.encodeproject.org/experiments/ENCSR000EEE transcription factor CEBPB-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF514FUP https://www.encodeproject.org/files/ENCFF514FUP/@@download/ENCFF514FUP.bam ENCFF347QQH https://www.encodeproject.org/files/ENCFF347QQH/@@download/ENCFF347QQH.bam 29.0 M 0 27.1 M 0.935 SE 36 36 native 0.0 M 20.3 M 20.0 M 0.690 0.98 0.98 69.51 100 1.13 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5ef6d94-9d8c-4dd0-af78-e64547b60a94/@@download/cross_correlation_plot/ENCFF000XQN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASS ENCFF000XQN Illumina Genome Analyzer 2016-12-12T17:21:35.276942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1620kQ03692pJ09J76g5fZQ ENCSR000EEX https://www.encodeproject.org/experiments/ENCSR000EEX transcription factor CEBPB-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EDO https://www.encodeproject.org/experiments/ENCSR000EDO "RNA binding protein,transcription factor" CEBPZ-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF186OVM https://www.encodeproject.org/files/ENCFF186OVM/@@download/ENCFF186OVM.bam ENCFF159EGA https://www.encodeproject.org/files/ENCFF159EGA/@@download/ENCFF159EGA.bam 30.4 M 0 29.7 M 0.977 SE 36 36 native 0.0 M 22.8 M 22.1 M 0.729 0.98 0.98 43.81 90 1.02 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/464e34b1-e518-4eed-b6f3-46bd19bda3be/@@download/cross_correlation_plot/ENCFF000XPZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMO ENCFF000XPZ Illumina Genome Analyzer 2016-12-10T22:54:41.115491+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1639X803697k5jKB6pJ7qkJ ENCSR000EDO https://www.encodeproject.org/experiments/ENCSR000EDO "RNA binding protein,transcription factor" CEBPZ-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF799JNH https://www.encodeproject.org/files/ENCFF799JNH/@@download/ENCFF799JNH.bam ENCFF227ZZW https://www.encodeproject.org/files/ENCFF227ZZW/@@download/ENCFF227ZZW.bam 35.9 M 0 35.6 M 0.991 SE 36 36 native 0.0 M 27.5 M 26.2 M 0.730 0.96 0.96 23.07 105 1.02 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/26b97564-f934-4b38-a6a4-0eb7ca264f7f/@@download/cross_correlation_plot/ENCFF000XQB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQB ENCFF000XQB Illumina Genome Analyzer 2016-12-10T23:12:59.296100+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1639g003692pJ09J76g5fy3 ENCSR000EED https://www.encodeproject.org/experiments/ENCSR000EED "RNA binding protein,transcription factor" CHD2-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF358QPW https://www.encodeproject.org/files/ENCFF358QPW/@@download/ENCFF358QPW.bam ENCFF528KZI https://www.encodeproject.org/files/ENCFF528KZI/@@download/ENCFF528KZI.bam 21.5 M 0 20.1 M 0.934 SE 36 36 native 0.0 M 14.9 M 14.5 M 0.677 0.98 0.99 110.74 110 1.18 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/94b2e50a-f574-4319-826f-a25b6879e856/@@download/cross_correlation_plot/ENCFF000XQP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARG ENCFF000XQP Illumina Genome Analyzer 2016-12-10T22:54:51.536382+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Pv003697vfpg2qKbyZGK ENCSR000EED https://www.encodeproject.org/experiments/ENCSR000EED "RNA binding protein,transcription factor" CHD2-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF291LSV https://www.encodeproject.org/files/ENCFF291LSV/@@download/ENCFF291LSV.bam ENCFF175XZF https://www.encodeproject.org/files/ENCFF175XZF/@@download/ENCFF175XZF.bam 27.4 M 0 25.5 M 0.929 SE 36 36 native 0.0 M 19.0 M 18.2 M 0.664 0.96 0.98 64.77 125 1.18 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0a79db8-faac-417c-8632-2f53d21db2e6/@@download/cross_correlation_plot/ENCFF000XQQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADO ENCFF000XQQ Illumina Genome Analyzer 2016-12-10T23:14:53.838312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Q0Q03699K237J9jY9kZK ENCSR000EER https://www.encodeproject.org/experiments/ENCSR000EER control Control-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF616YCB https://www.encodeproject.org/files/ENCFF616YCB/@@download/ENCFF616YCB.bam ENCFF866NKA https://www.encodeproject.org/files/ENCFF866NKA/@@download/ENCFF866NKA.bam 6.9 M 0 3.7 M 0.537 SE 27 27 native 0.0 M 2.6 M 2.2 M 0.319 0.86 0.86 7.02 75 1.22 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/90a313c5-4587-4013-ac79-1c6288bcdc0f/@@download/cross_correlation_plot/ENCFF000XRI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUX ENCFF000XRI Illumina Genome Analyzer 2016-10-26T17:34:17.837796+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Qj003694q32PPxBJ67VY ENCSR000EER https://www.encodeproject.org/experiments/ENCSR000EER control Control-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF992VDP https://www.encodeproject.org/files/ENCFF992VDP/@@download/ENCFF992VDP.bam ENCFF485END https://www.encodeproject.org/files/ENCFF485END/@@download/ENCFF485END.bam 3.8 M 0 3.7 M 0.965 SE 27 27 native 0.0 M 2.2 M 2.2 M 0.560 0.96 0.96 27.18 140 1.11 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c000aa2-6c4b-4738-a1ea-59d4da97b8ee/@@download/cross_correlation_plot/ENCFF000XRH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOR ENCFF000XRH Illumina Genome Analyzer 2016-10-26T17:34:18.573048+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082QvQ0369BX1xqb1B808qY ENCSR000EES https://www.encodeproject.org/experiments/ENCSR000EES control Control-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF909YMO https://www.encodeproject.org/files/ENCFF909YMO/@@download/ENCFF909YMO.bam ENCFF949TKQ https://www.encodeproject.org/files/ENCFF949TKQ/@@download/ENCFF949TKQ.bam 5.6 M 0 5.4 M 0.958 SE 27 27 native 0.0 M 3.4 M 3.4 M 0.596 0.99 0.99 181.69 115 1.05 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/047f7bd5-3a1f-4bd8-b8fb-ccfc42182746/@@download/cross_correlation_plot/ENCFF000XQR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEB ENCFF000XQR Illumina Genome Analyzer 2016-10-26T17:41:45.988988+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826YQ03699pQzk2JB6K7qq ENCSR000EES https://www.encodeproject.org/experiments/ENCSR000EES control Control-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF332OIG https://www.encodeproject.org/files/ENCFF332OIG/@@download/ENCFF332OIG.bam ENCFF628KSG https://www.encodeproject.org/files/ENCFF628KSG/@@download/ENCFF628KSG.bam 6.1 M 0 5.9 M 0.969 SE 27 27 native 0.0 M 3.7 M 3.7 M 0.606 0.99 0.99 98.63 120 1.06 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/046307a5-3fb0-4c1c-bb16-832db6feeb86/@@download/cross_correlation_plot/ENCFF000XQS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEC ENCFF000XQS Illumina Genome Analyzer 2016-10-26T17:37:15.197061+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826jj0369PQyG3V5B44Q1P ENCSR121CWV https://www.encodeproject.org/experiments/ENCSR121CWV control Control-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF190EPQ https://www.encodeproject.org/files/ENCFF190EPQ/@@download/ENCFF190EPQ.bam ENCFF044SKY https://www.encodeproject.org/files/ENCFF044SKY/@@download/ENCFF044SKY.bam 85.7 M 0 83.9 M 0.978 PE 100 100 None 37.3 M 0.0 M 36.2 M 0.845 0.97 0.97 35.07 250 1.05 7.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/e243a8bb-db83-468c-8b5e-72719ff10454/@@download/cross_correlation_plot/ENCFF002EFCENCFF002EFE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB407FJZ "michael-snyder:733_B_TruSeq_CGATGT,michael-snyder:L-495" "ENCFF002EFE,ENCFF002EFC" HiSeq 2000 2016-05-06T18:22:38.271772+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq6JQ03699yV3Z4G3B3vbk ENCSR121CWV https://www.encodeproject.org/experiments/ENCSR121CWV control Control-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF950AXC https://www.encodeproject.org/files/ENCFF950AXC/@@download/ENCFF950AXC.bam ENCFF068WBC https://www.encodeproject.org/files/ENCFF068WBC/@@download/ENCFF068WBC.bam 73.5 M 0 72.0 M 0.981 PE 100 100 None 31.9 M 0.0 M 30.6 M 0.833 0.96 0.96 24.62 240 1.06 9.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/f005c820-3a2d-47e0-8da5-f016c91fef69/@@download/cross_correlation_plot/ENCFF002EFBENCFF002EEZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB915FZX "michael-snyder:733_B_TruSeq_CAGATC,michael-snyder:L-496" "ENCFF002EEZ,ENCFF002EFB" HiSeq 2000 2016-05-06T18:20:22.205405+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq6PQ03691bVKf9v3P3fv8 ENCSR195ZCD https://www.encodeproject.org/experiments/ENCSR195ZCD control Control-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF320OXT https://www.encodeproject.org/files/ENCFF320OXT/@@download/ENCFF320OXT.bam ENCFF292OHG https://www.encodeproject.org/files/ENCFF292OHG/@@download/ENCFF292OHG.bam 63.6 M 0 61.6 M 0.969 PE 100 None 26.4 M 0.0 M 25.7 M 0.807 0.97 0.97 36.07 215 1.06 4.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9c462be-aae8-4bcc-8d65-c3dacff1d9f2/@@download/cross_correlation_plot/ENCFF048XWAENCFF075DIL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB916SKC michael-snyder:L-2115 "ENCFF075DIL,ENCFF048XWA" HiSeq 2000 2016-05-06T18:18:50.394584+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq7q003699b4kxvj2Yx1Pz ENCSR195ZCD https://www.encodeproject.org/experiments/ENCSR195ZCD control Control-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF642XIO https://www.encodeproject.org/files/ENCFF642XIO/@@download/ENCFF642XIO.bam ENCFF307ZRF https://www.encodeproject.org/files/ENCFF307ZRF/@@download/ENCFF307ZRF.bam 60.4 M 0 58.4 M 0.967 PE 100 None 25.1 M 0.0 M 24.3 M 0.806 0.97 0.97 34.14 210 1.06 4.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/27ae97b5-e8ee-41eb-876e-561a5ec91175/@@download/cross_correlation_plot/ENCFF430NCQENCFF326WHX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB287DCA michael-snyder:L-2116 "ENCFF326WHX,ENCFF430NCQ" HiSeq 2000 2016-05-06T18:18:44.032084+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq7vQ03693J1B73Q3Ggpf6 ENCSR399VVK https://www.encodeproject.org/experiments/ENCSR399VVK control Control-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF475DWJ https://www.encodeproject.org/files/ENCFF475DWJ/@@download/ENCFF475DWJ.bam ENCFF895VLA https://www.encodeproject.org/files/ENCFF895VLA/@@download/ENCFF895VLA.bam 124.5 M 0 119.2 M 0.957 PE 100 100 native 50.1 M 0.0 M 43.5 M 0.699 0.87 0.87 7.44 225 1.04 3.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3b453e6-5db9-46c9-ae26-7948a17392f4/@@download/cross_correlation_plot/ENCFF665FNPENCFF276QOR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB466SQH michael-snyder:L-3070 "ENCFF276QOR,ENCFF665FNP" HiSeq 4000 2016-09-16T03:23:42.025016+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyYq00369GZQjPPJb6P0bx ENCSR399VVK https://www.encodeproject.org/experiments/ENCSR399VVK control Control-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF621RXC https://www.encodeproject.org/files/ENCFF621RXC/@@download/ENCFF621RXC.bam ENCFF580CDY https://www.encodeproject.org/files/ENCFF580CDY/@@download/ENCFF580CDY.bam 159.4 M 0 145.5 M 0.913 PE 100 100 native 61.5 M 0.0 M 54.9 M 0.688 0.89 0.89 9.34 225 1.03 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cbe895f-5316-40a0-ab48-9a921dd6d125/@@download/cross_correlation_plot/ENCFF777BTDENCFF758XDM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB735WME michael-snyder:L-3071 "ENCFF758XDM,ENCFF777BTD" HiSeq 4000 2016-09-16T03:26:17.192073+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyYy003692xk39gZV14K6Z ENCSR613TDP https://www.encodeproject.org/experiments/ENCSR613TDP control Control-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF511RLN https://www.encodeproject.org/files/ENCFF511RLN/@@download/ENCFF511RLN.bam ENCFF834HAL https://www.encodeproject.org/files/ENCFF834HAL/@@download/ENCFF834HAL.bam 41.0 M 0 40.7 M 0.992 SE 36 36 None 0.0 M 31.5 M 30.2 M 0.736 0.96 0.96 27.99 130 1.01 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/80878524-d235-4b7b-9545-c06b6804a607/@@download/cross_correlation_plot/ENCFF002ECU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB955SQO michael-snyder:Input_HepG2_Rep1 ENCFF002ECU Illumina Genome Analyzer IIx 2016-05-06T18:08:50.018958+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQqj03691Q4QQpZ2q8Bf6 ENCSR613TDP https://www.encodeproject.org/experiments/ENCSR613TDP control Control-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF536CTV https://www.encodeproject.org/files/ENCFF536CTV/@@download/ENCFF536CTV.bam ENCFF976RPU https://www.encodeproject.org/files/ENCFF976RPU/@@download/ENCFF976RPU.bam 41.7 M 0 41.4 M 0.992 SE 36 36 None 0.0 M 32.0 M 30.5 M 0.730 0.96 0.96 24.46 130 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/f198ffc6-ba53-4509-bb1e-f3e8c7665ebc/@@download/cross_correlation_plot/ENCFF002ECQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB404ZTS michael-snyder:Input_HepG2_Rep2 ENCFF002ECQ Illumina Genome Analyzer IIx 2016-05-06T18:09:18.943126+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQzQ036961GyjjQ2QP8Yj ENCSR000EDV https://www.encodeproject.org/experiments/ENCSR000EDV transcription factor EP300-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF953FZD https://www.encodeproject.org/files/ENCFF953FZD/@@download/ENCFF953FZD.bam ENCFF789FCX https://www.encodeproject.org/files/ENCFF789FCX/@@download/ENCFF789FCX.bam 23.5 M 0 21.9 M 0.930 SE 36 36 native 0.0 M 16.4 M 15.8 M 0.673 0.98 0.98 41.64 105 1.05 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/29e59d3c-a3d9-46c3-b040-b6cc79d9ca2b/@@download/cross_correlation_plot/ENCFF000XVT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGY ENCFF000XVT Illumina Genome Analyzer 2016-12-10T18:01:59.556244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162BgQ036933PVVJ7Qq0156 ENCSR000EDV https://www.encodeproject.org/experiments/ENCSR000EDV transcription factor EP300-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF352YDX https://www.encodeproject.org/files/ENCFF352YDX/@@download/ENCFF352YDX.bam ENCFF134HIF https://www.encodeproject.org/files/ENCFF134HIF/@@download/ENCFF134HIF.bam 29.3 M 0 26.7 M 0.911 SE 36 36 native 0.0 M 19.8 M 19.4 M 0.662 0.98 0.98 51.23 90 1.03 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/bfb55923-fc63-4dd4-b5b0-b96ddb8ff3bc/@@download/cross_correlation_plot/ENCFF000XVS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALV ENCFF000XVS Illumina Genome Analyzer 2016-12-10T18:32:53.526381+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Bv80369PvYp91zK1Px37 ENCSR000EEW https://www.encodeproject.org/experiments/ENCSR000EEW transcription factor ESRRA-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR267DFA https://www.encodeproject.org/experiments/ENCSR267DFA transcription factor FOXA1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF396NXZ https://www.encodeproject.org/files/ENCFF396NXZ/@@download/ENCFF396NXZ.bam ENCFF890ZPI https://www.encodeproject.org/files/ENCFF890ZPI/@@download/ENCFF890ZPI.bam 56.3 M 0 54.4 M 0.967 PE 100 100 native 23.3 M 0.0 M 23.2 M 0.824 0.99 0.99 177.66 215 1.07 3.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/e33416b2-75ec-47bc-87a4-a0d0da4c75d7/@@download/cross_correlation_plot/ENCFF546MGMENCFF323EKY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB775TFF michael-snyder:L-2296 "ENCFF323EKY,ENCFF546MGM" HiSeq 2000 2016-10-09T17:06:11.937311+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47Yj0jv1g5yGjfvVx0P1p ENCSR267DFA https://www.encodeproject.org/experiments/ENCSR267DFA transcription factor FOXA1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF988UCQ https://www.encodeproject.org/files/ENCFF988UCQ/@@download/ENCFF988UCQ.bam ENCFF038LHD https://www.encodeproject.org/files/ENCFF038LHD/@@download/ENCFF038LHD.bam 56.8 M 0 54.9 M 0.966 PE 100 100 native 23.5 M 0.0 M 23.2 M 0.817 0.99 0.99 91.83 210 1.08 3.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/d41e43e0-a3b1-4073-9eef-daad5461cf74/@@download/cross_correlation_plot/ENCFF806EBYENCFF283OAI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB456ZGC michael-snyder:L-2297 "ENCFF806EBY,ENCFF283OAI" HiSeq 2000 2016-10-09T17:08:28.762795+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47b80jv1f60PxyZ9JGP7G ENCSR066EBK https://www.encodeproject.org/experiments/ENCSR066EBK transcription factor FOXA2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF775MUG https://www.encodeproject.org/files/ENCFF775MUG/@@download/ENCFF775MUG.bam ENCFF789HZR https://www.encodeproject.org/files/ENCFF789HZR/@@download/ENCFF789HZR.bam 69.1 M 0 67.2 M 0.973 PE 100 100 native 29.0 M 0.0 M 28.7 M 0.830 0.99 0.99 114.73 195 1.64 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6634252-92df-4853-8332-8055c87b0540/@@download/cross_correlation_plot/ENCFF035BJTENCFF778EKH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB480XHG michael-snyder:L-1818 "ENCFF035BJT,ENCFF778EKH" HiSeq 2000 2017-01-26T00:53:55.365299+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9K803695JvXVBgKgJgVX ENCSR066EBK https://www.encodeproject.org/experiments/ENCSR066EBK transcription factor FOXA2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF966VDA https://www.encodeproject.org/files/ENCFF966VDA/@@download/ENCFF966VDA.bam ENCFF558JGW https://www.encodeproject.org/files/ENCFF558JGW/@@download/ENCFF558JGW.bam 73.4 M 0 71.6 M 0.975 PE 100 100 native 31.0 M 0.0 M 30.5 M 0.831 0.98 0.98 64.32 195 1.75 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd72f024-6121-418a-bd9a-5800a6d01702/@@download/cross_correlation_plot/ENCFF414KXUENCFF015KAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB870SCL michael-snyder:L-1819 "ENCFF414KXU,ENCFF015KAY" HiSeq 2000 2017-01-26T01:27:56.226057+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBbQ036902FqZ27ZbbzqZ ENCSR171FUX https://www.encodeproject.org/experiments/ENCSR171FUX transcription factor FOXK2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF890FEL https://www.encodeproject.org/files/ENCFF890FEL/@@download/ENCFF890FEL.bam ENCFF020SSF https://www.encodeproject.org/files/ENCFF020SSF/@@download/ENCFF020SSF.bam 69.1 M 0 66.2 M 0.958 PE 100 100 native 28.1 M 0.0 M 27.6 M 0.800 0.98 0.98 66.34 200 1.06 3.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4edec11-f36f-4abd-a178-ace5908da350/@@download/cross_correlation_plot/ENCFF009QNHENCFF089RFH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB729WHK michael-snyder:L-2045 "ENCFF009QNH,ENCFF089RFH" HiSeq 2000 2016-10-09T17:12:28.198287+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kq80jv1g5yGjfvVx0Kbx ENCSR171FUX https://www.encodeproject.org/experiments/ENCSR171FUX transcription factor FOXK2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF463YKI https://www.encodeproject.org/files/ENCFF463YKI/@@download/ENCFF463YKI.bam ENCFF735QZR https://www.encodeproject.org/files/ENCFF735QZR/@@download/ENCFF735QZR.bam 81.4 M 0 78.1 M 0.960 PE 100 100 native 33.2 M 0.0 M 32.5 M 0.799 0.98 0.98 48.11 210 1.06 2.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/d27e329e-4da3-499d-a9ad-0c2aae83e3ce/@@download/cross_correlation_plot/ENCFF749IGFENCFF746KTH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB938PAU michael-snyder:L-2046 "ENCFF749IGF,ENCFF746KTH" HiSeq 2000 2016-10-09T17:17:21.232277+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kvj0jv1xPyfX78Yz4gV8 ENCSR029LBT https://www.encodeproject.org/experiments/ENCSR029LBT transcription factor FOXP1-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF209IIA https://www.encodeproject.org/files/ENCFF209IIA/@@download/ENCFF209IIA.bam ENCFF616NXW https://www.encodeproject.org/files/ENCFF616NXW/@@download/ENCFF616NXW.bam 72.2 M 0 69.8 M 0.967 PE 100 100 native 29.4 M 0.0 M 28.8 M 0.799 0.98 0.98 57.00 210 1.06 3.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/adb7135d-f360-4a2c-9588-6230b30d169b/@@download/cross_correlation_plot/ENCFF363OSMENCFF175BVH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB503ZEK michael-snyder:L-1731 "ENCFF363OSM,ENCFF175BVH" HiSeq 2000 2016-10-09T17:16:06.124430+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qk80jv1XYYX2Fxk3f4gP ENCSR029LBT https://www.encodeproject.org/experiments/ENCSR029LBT transcription factor FOXP1-human HepG2 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF317VSS https://www.encodeproject.org/files/ENCFF317VSS/@@download/ENCFF317VSS.bam ENCFF014WCS https://www.encodeproject.org/files/ENCFF014WCS/@@download/ENCFF014WCS.bam 77.8 M 0 75.2 M 0.967 PE 100 100 native 31.9 M 0.0 M 31.0 M 0.797 0.97 0.97 36.94 205 1.05 3.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce429a91-2215-4604-85e4-5259e777fa43/@@download/cross_correlation_plot/ENCFF294HSTENCFF234SUV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB572NYO michael-snyder:L-1735 "ENCFF234SUV,ENCFF294HST" HiSeq 2000 2016-10-09T17:16:21.385286+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qpj0jv1xPyfX78Yz4gY5 ENCSR000EDR https://www.encodeproject.org/experiments/ENCSR000EDR control goat-IgG-control-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF702VTX https://www.encodeproject.org/files/ENCFF702VTX/@@download/ENCFF702VTX.bam ENCFF604FHH https://www.encodeproject.org/files/ENCFF604FHH/@@download/ENCFF604FHH.bam 21.7 M 0 21.0 M 0.969 SE 36 36 native 0.0 M 15.7 M 15.5 M 0.716 0.99 0.99 98.22 55 1.02 0.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/9374ce19-2d2f-44c7-bfb6-642fc877c268/@@download/cross_correlation_plot/ENCFF000XSE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMR ENCFF000XSE Illumina Genome Analyzer 2016-10-26T17:38:15.816773+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082GY003698F1qV3kBFq33V ENCSR000EDR https://www.encodeproject.org/experiments/ENCSR000EDR control goat-IgG-control-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF125NKU https://www.encodeproject.org/files/ENCFF125NKU/@@download/ENCFF125NKU.bam ENCFF659OAL https://www.encodeproject.org/files/ENCFF659OAL/@@download/ENCFF659OAL.bam 19.4 M 0 19.0 M 0.977 SE 36 36 native 0.0 M 14.2 M 14.0 M 0.722 0.99 0.99 84.85 60 1.01 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/766177e3-0504-4ea0-b328-b20a3f41da6b/@@download/cross_correlation_plot/ENCFF000XSG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB160FCO ENCFF000XSG Illumina Genome Analyzer 2016-10-26T17:37:36.124838+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Gk80369KPb3j15B4p8pv ENCSR219NRT https://www.encodeproject.org/experiments/ENCSR219NRT "RNA binding protein,transcription factor" GTF2F1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF705TRN https://www.encodeproject.org/files/ENCFF705TRN/@@download/ENCFF705TRN.bam ENCFF749NTQ https://www.encodeproject.org/files/ENCFF749NTQ/@@download/ENCFF749NTQ.bam 29.5 M 0 29.2 M 0.987 SE 36 36 native 0.0 M 21.9 M 20.7 M 0.700 0.95 0.95 19.44 130 1.03 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/20c273c0-508a-4294-982a-ec1c2c42ea7d/@@download/cross_correlation_plot/ENCFF002EAV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB213FHF michael-snyder:TFIIF_ab28179_HepG2_Rep2 ENCFF002EAV Illumina Genome Analyzer IIx 2016-10-09T17:10:01.557649+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xpQ0jv1XvFGkBjjfjQ45 ENCSR219NRT https://www.encodeproject.org/experiments/ENCSR219NRT "RNA binding protein,transcription factor" GTF2F1-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF368FEM https://www.encodeproject.org/files/ENCFF368FEM/@@download/ENCFF368FEM.bam ENCFF557PDF https://www.encodeproject.org/files/ENCFF557PDF/@@download/ENCFF557PDF.bam 27.7 M 0 25.4 M 0.916 SE 36 36 native 0.0 M 19.4 M 19.0 M 0.687 0.98 0.98 50.08 80 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b84a62f-7a4d-4e61-8025-0ec3eeb78c0f/@@download/cross_correlation_plot/ENCFF002EAR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB758NLY michael-snyder:TFIIF_ab28179_HepG2_Rep3 ENCFF002EAR Illumina Genome Analyzer IIx 2016-10-09T17:09:48.678984+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xv00jv1XYYX2Fxk3f4kv ENCSR529JYA https://www.encodeproject.org/experiments/ENCSR529JYA transcription factor HCFC1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF242BHJ https://www.encodeproject.org/files/ENCFF242BHJ/@@download/ENCFF242BHJ.bam ENCFF465MCM https://www.encodeproject.org/files/ENCFF465MCM/@@download/ENCFF465MCM.bam 24.8 M 0 24.2 M 0.976 SE 36 36 native 0.0 M 17.9 M 17.4 M 0.702 0.97 0.98 41.52 115 1.08 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/43d82cf5-9bda-4e45-b946-719148e5b419/@@download/cross_correlation_plot/ENCFF002EDN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB036AVF michael-snyder:HCFC1_NB100-68209_HepG2_Rep1 ENCFF002EDN Illumina Genome Analyzer IIx 2016-10-09T17:34:09.747113+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5jbQ0jv1pv809pj5Z1VkZ ENCSR529JYA https://www.encodeproject.org/experiments/ENCSR529JYA transcription factor HCFC1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF215EOS https://www.encodeproject.org/files/ENCFF215EOS/@@download/ENCFF215EOS.bam ENCFF926YYO https://www.encodeproject.org/files/ENCFF926YYO/@@download/ENCFF926YYO.bam 26.1 M 0 25.6 M 0.979 SE 36 36 native 0.0 M 19.4 M 18.7 M 0.715 0.97 0.98 49.88 115 1.22 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/8cec9102-a217-4f86-a2a3-8888e3b82aa1/@@download/cross_correlation_plot/ENCFF002EDS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB649IQZ michael-snyder:HCFC1_NB100-68209_HepG2_Rep2 ENCFF002EDS Illumina Genome Analyzer IIx 2016-10-09T17:09:12.479821+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bG00jv1XvFGkBjjfjPqP ENCSR337NWW https://www.encodeproject.org/experiments/ENCSR337NWW "transcription factor,chromatin remodeller" HDAC2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF524WHV https://www.encodeproject.org/files/ENCFF524WHV/@@download/ENCFF524WHV.bam ENCFF279VWS https://www.encodeproject.org/files/ENCFF279VWS/@@download/ENCFF279VWS.bam 67.7 M 0 65.7 M 0.971 PE 100 100 native 28.0 M 0.0 M 27.5 M 0.812 0.98 0.98 53.49 215 1.05 4.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bbff02b-08b5-42a8-b345-374bd1bcb6af/@@download/cross_correlation_plot/ENCFF489LNLENCFF974DWD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB492HKP michael-snyder:L-1820 "ENCFF974DWD,ENCFF489LNL" HiSeq 2000 2016-10-09T17:14:09.535426+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fq00jv1xPyfX78Yz4gKX ENCSR337NWW https://www.encodeproject.org/experiments/ENCSR337NWW "transcription factor,chromatin remodeller" HDAC2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF570MLW https://www.encodeproject.org/files/ENCFF570MLW/@@download/ENCFF570MLW.bam ENCFF633RNP https://www.encodeproject.org/files/ENCFF633RNP/@@download/ENCFF633RNP.bam 60.0 M 0 58.2 M 0.969 PE 100 100 native 24.7 M 0.0 M 24.3 M 0.809 0.98 0.98 53.57 210 1.06 3.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2c2c7d3-705c-4034-aa4c-48a68bdb929c/@@download/cross_correlation_plot/ENCFF917SHUENCFF862EVT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB579ANK michael-snyder:L-1821 "ENCFF862EVT,ENCFF917SHU" HiSeq 2000 2016-10-09T17:13:24.597319+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fvQ0jv1vY92b0GYjVFKK ENCSR409VFP https://www.encodeproject.org/experiments/ENCSR409VFP transcription factor HES1-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR000EEU https://www.encodeproject.org/experiments/ENCSR000EEU transcription factor HNF4A-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EET https://www.encodeproject.org/experiments/ENCSR000EET transcription factor HSF1-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR278JQG https://www.encodeproject.org/experiments/ENCSR278JQG transcription factor IKZF1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF143LAN https://www.encodeproject.org/files/ENCFF143LAN/@@download/ENCFF143LAN.bam ENCFF912PQA https://www.encodeproject.org/files/ENCFF912PQA/@@download/ENCFF912PQA.bam 60.3 M 0 58.4 M 0.968 PE 100 100 native 25.1 M 0.0 M 24.8 M 0.823 0.99 0.99 110.29 215 1.06 5.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/3391a834-cb9b-4646-a042-228d5fdc8430/@@download/cross_correlation_plot/ENCFF467WHQENCFF087IYL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB786ZXI michael-snyder:L-2300 "ENCFF467WHQ,ENCFF087IYL" HiSeq 2000 2016-10-09T17:14:05.512719+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yK80jv1XYYX2Fxk3f4pX ENCSR278JQG https://www.encodeproject.org/experiments/ENCSR278JQG transcription factor IKZF1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF379UJI https://www.encodeproject.org/files/ENCFF379UJI/@@download/ENCFF379UJI.bam ENCFF208KNM https://www.encodeproject.org/files/ENCFF208KNM/@@download/ENCFF208KNM.bam 62.7 M 0 60.5 M 0.965 PE 100 100 native 25.7 M 0.0 M 25.7 M 0.818 1.00 1.00 301.13 225 1.05 5.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/90820ee7-9269-4f1a-a01d-3618cc7f67fb/@@download/cross_correlation_plot/ENCFF761HWGENCFF035FBQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB396MDN michael-snyder:L-2301 "ENCFF035FBQ,ENCFF761HWG" HiSeq 2000 2016-10-09T17:16:28.402344+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yPj0jv1vY92b0GYjVFbz ENCSR000EEJ https://www.encodeproject.org/experiments/ENCSR000EEJ transcription factor IRF3-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF362OKB https://www.encodeproject.org/files/ENCFF362OKB/@@download/ENCFF362OKB.bam ENCFF154EFK https://www.encodeproject.org/files/ENCFF154EFK/@@download/ENCFF154EFK.bam 27.6 M 0 22.1 M 0.799 SE 36 36 native 0.0 M 16.2 M 15.2 M 0.550 0.94 0.94 16.49 120 1.02 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/b507a261-0eb0-42c6-8680-5d855f671d19/@@download/cross_correlation_plot/ENCFF000XTN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAM ENCFF000XTN Illumina Genome Analyzer 2016-12-11T04:36:22.156252+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165jJ803692yykb1zBpz801 ENCSR000EEJ https://www.encodeproject.org/experiments/ENCSR000EEJ transcription factor IRF3-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF780LDK https://www.encodeproject.org/files/ENCFF780LDK/@@download/ENCFF780LDK.bam ENCFF402NFR https://www.encodeproject.org/files/ENCFF402NFR/@@download/ENCFF402NFR.bam 23.6 M 0 20.3 M 0.861 SE 36 36 native 0.0 M 15.0 M 12.3 M 0.523 0.82 0.82 5.21 125 1.06 3.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba426d79-9992-4ee6-8c18-1475fdab186f/@@download/cross_correlation_plot/ENCFF000XTO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAL ENCFF000XTO Illumina Genome Analyzer 2016-12-11T04:34:18.414675+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165jX80369BgG8x1ygv1XVZ ENCSR000EEK https://www.encodeproject.org/experiments/ENCSR000EEK transcription factor JUN-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF074GYD https://www.encodeproject.org/files/ENCFF074GYD/@@download/ENCFF074GYD.bam ENCFF065CFY https://www.encodeproject.org/files/ENCFF065CFY/@@download/ENCFF065CFY.bam 28.7 M 0 22.4 M 0.779 SE 36 36 native 0.0 M 16.3 M 15.8 M 0.548 0.97 0.97 33.37 125 1.07 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc15ed77-a02e-4bb3-bfe9-46150e567399/@@download/cross_correlation_plot/ENCFF000XQU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARQ ENCFF000XQU Illumina Genome Analyzer 2016-12-11T04:55:57.951787+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667jj0369BJyPz9fb9qYVZ ENCSR000EEK https://www.encodeproject.org/experiments/ENCSR000EEK transcription factor JUN-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF122BQB https://www.encodeproject.org/files/ENCFF122BQB/@@download/ENCFF122BQB.bam ENCFF295FER https://www.encodeproject.org/files/ENCFF295FER/@@download/ENCFF295FER.bam 28.3 M 0 23.0 M 0.811 SE 36 36 native 0.0 M 17.1 M 16.4 M 0.579 0.96 0.96 25.44 135 1.09 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ad36d6d-0f06-4ec6-9f71-a8d452d7c78f/@@download/cross_correlation_plot/ENCFF000XQT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARR ENCFF000XQT Illumina Genome Analyzer 2016-12-11T04:57:23.958359+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667xj03696Kk1YFv8qy58b ENCSR000EEI https://www.encodeproject.org/experiments/ENCSR000EEI transcription factor JUND-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF416LMF https://www.encodeproject.org/files/ENCFF416LMF/@@download/ENCFF416LMF.bam ENCFF750TAX https://www.encodeproject.org/files/ENCFF750TAX/@@download/ENCFF750TAX.bam 28.7 M 0 23.3 M 0.813 SE 36 36 native 0.0 M 17.3 M 16.7 M 0.583 0.97 0.97 41.33 125 1.25 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0e20cc3-2223-4f4a-a253-c27d323b9818/@@download/cross_correlation_plot/ENCFF000XTR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACP ENCFF000XTR Illumina Genome Analyzer 2016-12-10T20:50:49.594674+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162xk8036933PVVJ7Qq018y ENCSR000EEI https://www.encodeproject.org/experiments/ENCSR000EEI transcription factor JUND-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF594GDM https://www.encodeproject.org/files/ENCFF594GDM/@@download/ENCFF594GDM.bam ENCFF676IYR https://www.encodeproject.org/files/ENCFF676IYR/@@download/ENCFF676IYR.bam 22.0 M 0 19.7 M 0.897 SE 36 36 native 0.0 M 15.0 M 14.5 M 0.662 0.97 0.98 52.09 115 1.43 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab9f828c-2f3a-4a73-8e66-686ec014d2b7/@@download/cross_correlation_plot/ENCFF000XTQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACS ENCFF000XTQ Illumina Genome Analyzer 2016-12-10T20:43:47.330860+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162xyj0369445BJJ915X9fG ENCSR620YNB https://www.encodeproject.org/experiments/ENCSR620YNB "transcription factor,chromatin remodeller,RNA binding protein" KAT2B-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF880EMH https://www.encodeproject.org/files/ENCFF880EMH/@@download/ENCFF880EMH.bam ENCFF238OKX https://www.encodeproject.org/files/ENCFF238OKX/@@download/ENCFF238OKX.bam 26.0 M 0 25.0 M 0.962 SE 36 36 native 0.0 M 19.1 M 18.3 M 0.702 0.96 0.96 24.74 120 1.02 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d80977b-1c34-4ab1-a6b6-da2d9cd6eafa/@@download/cross_correlation_plot/ENCFF002EDZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB429EFB michael-snyder:PCAF_3378_HepG2_Rep1 ENCFF002EDZ Illumina Genome Analyzer IIx 2016-10-09T17:09:37.864507+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xF00jv1vY92b0GYjVFZj ENCSR620YNB https://www.encodeproject.org/experiments/ENCSR620YNB "transcription factor,chromatin remodeller,RNA binding protein" KAT2B-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF322GHA https://www.encodeproject.org/files/ENCFF322GHA/@@download/ENCFF322GHA.bam ENCFF665ZGD https://www.encodeproject.org/files/ENCFF665ZGD/@@download/ENCFF665ZGD.bam 22.0 M 0 21.3 M 0.969 SE 36 36 native 0.0 M 15.9 M 15.6 M 0.710 0.98 0.99 73.28 120 1.05 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6842acb-7773-4104-9343-bd2b71252f8a/@@download/cross_correlation_plot/ENCFF002EED.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB001BPZ michael-snyder:PCAF_3378_HepG2_Rep2 ENCFF002EED Illumina Genome Analyzer IIx 2016-10-09T17:09:24.990959+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xG80jv1vY92b0GYjVFb1 ENCSR950NAZ https://www.encodeproject.org/experiments/ENCSR950NAZ transcription factor LCORL-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF738SPX https://www.encodeproject.org/files/ENCFF738SPX/@@download/ENCFF738SPX.bam ENCFF137USO https://www.encodeproject.org/files/ENCFF137USO/@@download/ENCFF137USO.bam 72.3 M 0 69.9 M 0.967 PE 100 100 native 29.5 M 0.0 M 29.0 M 0.801 0.98 0.98 56.86 210 1.05 3.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/881701cd-582b-4dcb-9c0f-bfc21ca989f9/@@download/cross_correlation_plot/ENCFF089HKFENCFF405NMN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB221CNQ michael-snyder:L-1728 "ENCFF089HKF,ENCFF405NMN" HiSeq 2000 2016-10-09T17:08:03.731297+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BP00jv1XYYX2Fxk3f595 ENCSR950NAZ https://www.encodeproject.org/experiments/ENCSR950NAZ transcription factor LCORL-human HepG2 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF034KOM https://www.encodeproject.org/files/ENCFF034KOM/@@download/ENCFF034KOM.bam ENCFF732MNX https://www.encodeproject.org/files/ENCFF732MNX/@@download/ENCFF732MNX.bam 67.5 M 0 65.5 M 0.969 PE 100 100 native 27.9 M 0.0 M 27.3 M 0.809 0.98 0.98 44.28 225 1.05 3.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/af8dd808-88cf-463b-8d71-b150ff105823/@@download/cross_correlation_plot/ENCFF822RJXENCFF746FPW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB317KZP michael-snyder:L-1732 "ENCFF746FPW,ENCFF822RJX" HiSeq 2000 2016-10-09T17:05:13.899000+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BQj0jv1XvFGkBjjfjQX2 ENCSR000EEC https://www.encodeproject.org/experiments/ENCSR000EEC transcription factor MAFF-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF728VLB https://www.encodeproject.org/files/ENCFF728VLB/@@download/ENCFF728VLB.bam ENCFF836BQL https://www.encodeproject.org/files/ENCFF836BQL/@@download/ENCFF836BQL.bam 29.3 M 0 27.2 M 0.928 SE 36 36 native 0.0 M 20.6 M 19.8 M 0.676 0.97 0.97 39.35 120 1.30 2.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/302674d4-02aa-4a26-88c6-d8a8a698ae35/@@download/cross_correlation_plot/ENCFF000XUA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARK ENCFF000XUA Illumina Genome Analyzer 2016-12-11T02:05:48.215704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163fg003696z7JqGk4Yzy4p ENCSR000EEC https://www.encodeproject.org/experiments/ENCSR000EEC transcription factor MAFF-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF991ICQ https://www.encodeproject.org/files/ENCFF991ICQ/@@download/ENCFF991ICQ.bam ENCFF851GVD https://www.encodeproject.org/files/ENCFF851GVD/@@download/ENCFF851GVD.bam 34.3 M 0 19.1 M 0.555 SE 36 36 native 0.0 M 13.0 M 12.4 M 0.360 0.95 0.96 33.02 120 2.03 2.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/19063358-a08d-4410-9f7e-df2f29b957a3/@@download/cross_correlation_plot/ENCFF000XTZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARJ ENCFF000XTZ Illumina Genome Analyzer 2016-12-11T02:06:26.361470+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163fv803696z7JqGk4Yzy53 ENCSR000EDZ https://www.encodeproject.org/experiments/ENCSR000EDZ transcription factor MAFK-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF310RSH https://www.encodeproject.org/files/ENCFF310RSH/@@download/ENCFF310RSH.bam ENCFF397RLJ https://www.encodeproject.org/files/ENCFF397RLJ/@@download/ENCFF397RLJ.bam 32.4 M 0 29.9 M 0.923 SE 36 36 native 0.0 M 22.7 M 22.0 M 0.680 0.97 0.97 42.80 120 1.21 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/abbdb186-aab2-42f8-b8be-5246a62bc1b4/@@download/cross_correlation_plot/ENCFF000XUU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFE ENCFF000XUU Illumina Genome Analyzer 2016-10-09T17:03:14.724833+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Ff00jv1g5yGjfvVx0PQy ENCSR000EDZ https://www.encodeproject.org/experiments/ENCSR000EDZ transcription factor MAFK-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF755GBM https://www.encodeproject.org/files/ENCFF755GBM/@@download/ENCFF755GBM.bam ENCFF852UNR https://www.encodeproject.org/files/ENCFF852UNR/@@download/ENCFF852UNR.bam 33.4 M 0 29.8 M 0.892 SE 36 36 native 0.0 M 22.6 M 22.1 M 0.662 0.98 0.98 57.35 95 1.16 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/9bac60d7-a9ca-4daf-ae53-fe3dc7de5e97/@@download/cross_correlation_plot/ENCFF000XVK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEP ENCFF000XVK Illumina Genome Analyzer 2016-10-09T17:03:03.041608+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Fj00jv1zBYbxYJ5zzzqp ENCSR000EEB https://www.encodeproject.org/experiments/ENCSR000EEB transcription factor MAFK-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF326SGF https://www.encodeproject.org/files/ENCFF326SGF/@@download/ENCFF326SGF.bam ENCFF122DRL https://www.encodeproject.org/files/ENCFF122DRL/@@download/ENCFF122DRL.bam 40.7 M 0 36.8 M 0.903 SE 36 36 native 0.0 M 28.3 M 26.3 M 0.645 0.93 0.95 23.13 125 1.49 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/db02b393-e8ca-461c-90d8-0244ff8aab21/@@download/cross_correlation_plot/ENCFF000XUL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABD ENCFF000XUL Illumina Genome Analyzer 2016-10-09T17:34:18.853403+00:00 released processing https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Z6j0jv1g5yGjfvVx0PKP ENCSR000EEB https://www.encodeproject.org/experiments/ENCSR000EEB transcription factor MAFK-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF420BSH https://www.encodeproject.org/files/ENCFF420BSH/@@download/ENCFF420BSH.bam ENCFF680GLU https://www.encodeproject.org/files/ENCFF680GLU/@@download/ENCFF680GLU.bam 39.8 M 0 36.3 M 0.913 SE 36 36 native 0.0 M 28.2 M 26.0 M 0.654 0.93 0.94 22.02 115 1.57 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c7c5d75-990f-4ef4-bf70-5ddb81710830/@@download/cross_correlation_plot/ENCFF000XUK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAY ENCFF000XUK Illumina Genome Analyzer 2016-10-09T17:34:06.352534+00:00 released processing https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Z800jv1zBYbxYJ5zzzby ENCSR000EDS https://www.encodeproject.org/experiments/ENCSR000EDS transcription factor MAX-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF388QKQ https://www.encodeproject.org/files/ENCFF388QKQ/@@download/ENCFF388QKQ.bam ENCFF864TPK https://www.encodeproject.org/files/ENCFF864TPK/@@download/ENCFF864TPK.bam 24.0 M 0 23.4 M 0.977 SE 36 36 native 0.0 M 17.5 M 16.3 M 0.682 0.94 0.94 16.23 105 1.14 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/18687a8a-249b-4cea-96d0-4213136f16b3/@@download/cross_correlation_plot/ENCFF000XUF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUW ENCFF000XUF Illumina Genome Analyzer 2016-12-11T03:16:00.281302+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164P1j03692yykb1zBpz7by ENCSR000EDS https://www.encodeproject.org/experiments/ENCSR000EDS transcription factor MAX-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF675JRZ https://www.encodeproject.org/files/ENCFF675JRZ/@@download/ENCFF675JRZ.bam ENCFF870MAQ https://www.encodeproject.org/files/ENCFF870MAQ/@@download/ENCFF870MAQ.bam 19.7 M 0 19.3 M 0.983 SE 36 36 native 0.0 M 14.6 M 14.2 M 0.722 0.97 0.98 40.29 100 1.05 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/622406af-5b54-4a3e-b513-1ba0204be111/@@download/cross_correlation_plot/ENCFF000XUH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANG ENCFF000XUH Illumina Genome Analyzer 2016-12-11T03:12:47.224514+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164P6j03693JQ1ZJ95zxGqb ENCSR000EDN https://www.encodeproject.org/experiments/ENCSR000EDN "RNA binding protein,transcription factor" MAZ-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF147JLU https://www.encodeproject.org/files/ENCFF147JLU/@@download/ENCFF147JLU.bam ENCFF477SBU https://www.encodeproject.org/files/ENCFF477SBU/@@download/ENCFF477SBU.bam 27.1 M 0 26.8 M 0.989 SE 36 36 native 0.0 M 20.7 M 19.9 M 0.734 0.96 0.96 27.31 110 1.07 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/613fff84-bac0-4069-aae9-ffd0652230e2/@@download/cross_correlation_plot/ENCFF000XUN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATV ENCFF000XUN Illumina Genome Analyzer 2016-12-10T18:37:38.379759+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Fgj03697K4B1J71pxzQy ENCSR000EDN https://www.encodeproject.org/experiments/ENCSR000EDN "RNA binding protein,transcription factor" MAZ-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF932DKG https://www.encodeproject.org/files/ENCFF932DKG/@@download/ENCFF932DKG.bam ENCFF760BPG https://www.encodeproject.org/files/ENCFF760BPG/@@download/ENCFF760BPG.bam 28.9 M 0 27.7 M 0.960 SE 36 36 native 0.0 M 21.2 M 14.5 M 0.502 0.68 0.67 2.85 110 1.06 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/5850d471-b1b8-4bd2-b86f-9375b2c2785b/@@download/cross_correlation_plot/ENCFF000XUP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATC ENCFF000XUP Illumina Genome Analyzer 2016-12-10T18:06:24.293756+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162FvQ03692BKq0F3V3jFKv ENCSR261EDU https://www.encodeproject.org/experiments/ENCSR261EDU transcription factor MNT-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF266AHN https://www.encodeproject.org/files/ENCFF266AHN/@@download/ENCFF266AHN.bam ENCFF737PIO https://www.encodeproject.org/files/ENCFF737PIO/@@download/ENCFF737PIO.bam 61.3 M 0 59.4 M 0.970 PE 100 100 native 25.5 M 0.0 M 25.0 M 0.815 0.98 0.98 46.71 205 1.23 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/a845524a-cd81-4620-9343-ea788e7ebc8a/@@download/cross_correlation_plot/ENCFF338EIMENCFF873VGP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB903IJH michael-snyder:L-1678 "ENCFF873VGP,ENCFF338EIM" HiSeq 2000 2016-10-09T17:02:30.059953+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J080jv1XYYX2Fxk3f5J8 ENCSR261EDU https://www.encodeproject.org/experiments/ENCSR261EDU transcription factor MNT-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF510TME https://www.encodeproject.org/files/ENCFF510TME/@@download/ENCFF510TME.bam ENCFF655ILW https://www.encodeproject.org/files/ENCFF655ILW/@@download/ENCFF655ILW.bam 55.1 M 0 53.6 M 0.973 PE 100 100 native 23.1 M 0.0 M 22.5 M 0.816 0.97 0.97 34.89 205 1.27 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b1a3b4c-bb2c-4588-b98e-f57fd66770f2/@@download/cross_correlation_plot/ENCFF463BOFENCFF349RWV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB698MGV michael-snyder:L-1679 "ENCFF463BOF,ENCFF349RWV" HiSeq 2000 2016-10-09T17:01:58.112663+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J1j0jv1g5yGjfvVx0P7Y ENCSR730TBC https://www.encodeproject.org/experiments/ENCSR730TBC transcription factor MNT-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF369YVA https://www.encodeproject.org/files/ENCFF369YVA/@@download/ENCFF369YVA.bam ENCFF189YTO https://www.encodeproject.org/files/ENCFF189YTO/@@download/ENCFF189YTO.bam 93.2 M 0 91.3 M 0.980 PE 100 100 native 40.0 M 0.0 M 36.9 M 0.791 0.92 0.92 12.82 210 1.05 4.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c19d87b-84d6-46b6-a3b7-88953d786cca/@@download/cross_correlation_plot/ENCFF594PZUENCFF195VBJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB355XFO michael-snyder:L-3484 "ENCFF594PZU,ENCFF195VBJ" HiSeq 4000 2017-06-06T18:21:19.906409+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3V480369Gx2gb917Q1j13 ENCSR730TBC https://www.encodeproject.org/experiments/ENCSR730TBC transcription factor MNT-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF761YGL https://www.encodeproject.org/files/ENCFF761YGL/@@download/ENCFF761YGL.bam ENCFF968LYC https://www.encodeproject.org/files/ENCFF968LYC/@@download/ENCFF968LYC.bam 105.1 M 0 102.9 M 0.979 PE 100 100 native 45.0 M 0.0 M 42.3 M 0.806 0.94 0.94 16.71 150 1.07 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c981b33-8c3f-407b-ad3b-f96636a9c212/@@download/cross_correlation_plot/ENCFF089AERENCFF032BZZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB958WUN michael-snyder:L-3485 "ENCFF089AER,ENCFF032BZZ" HiSeq 4000 2017-06-06T18:21:21.926426+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3V68036990P6v90pyg35G ENCSR000EDU https://www.encodeproject.org/experiments/ENCSR000EDU transcription factor MXI1-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR210ZYL https://www.encodeproject.org/experiments/ENCSR210ZYL transcription factor NBN-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF768SUF https://www.encodeproject.org/files/ENCFF768SUF/@@download/ENCFF768SUF.bam ENCFF956QNM https://www.encodeproject.org/files/ENCFF956QNM/@@download/ENCFF956QNM.bam 94.3 M 0 91.3 M 0.968 PE 100 100 native 38.4 M 0.0 M 37.8 M 0.802 0.98 0.98 66.17 210 1.04 3.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/f72d48cd-ff37-45a5-8a0c-9af5d39e32f6/@@download/cross_correlation_plot/ENCFF501XSTENCFF563CUE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB761EDW michael-snyder:L-1729 "ENCFF563CUE,ENCFF501XST" HiSeq 2000 2016-10-09T17:43:46.335191+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5vb00jv1yxz42848qkV6f ENCSR210ZYL https://www.encodeproject.org/experiments/ENCSR210ZYL transcription factor NBN-human HepG2 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF675XCZ https://www.encodeproject.org/files/ENCFF675XCZ/@@download/ENCFF675XCZ.bam ENCFF204YBE https://www.encodeproject.org/files/ENCFF204YBE/@@download/ENCFF204YBE.bam 81.1 M 0 78.4 M 0.967 PE 100 100 native 33.1 M 0.0 M 32.5 M 0.802 0.98 0.98 53.61 215 1.05 4.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b476b3c-085a-49a1-aa1a-d1f76499beec/@@download/cross_correlation_plot/ENCFF473SIWENCFF993SXO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB912XPB michael-snyder:L-1733 "ENCFF473SIW,ENCFF993SXO" HiSeq 2000 2016-10-09T17:40:19.579662+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5vg80jv1z5Z5kK1VpQJJJ ENCSR424NSN https://www.encodeproject.org/experiments/ENCSR424NSN transcription factor NBN-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR562TYX https://www.encodeproject.org/experiments/ENCSR562TYX transcription factor NFATC3-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR488EES https://www.encodeproject.org/experiments/ENCSR488EES transcription factor NFE2L2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF421XBU https://www.encodeproject.org/files/ENCFF421XBU/@@download/ENCFF421XBU.bam ENCFF935IVR https://www.encodeproject.org/files/ENCFF935IVR/@@download/ENCFF935IVR.bam 30.2 M 0 30.0 M 0.994 SE 36 36 native 0.0 M 23.3 M 21.9 M 0.723 0.94 0.94 16.93 125 1.04 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4dc0378-f171-4355-89ce-669316b5d368/@@download/cross_correlation_plot/ENCFF002EAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB098SOX michael-snyder:Nrf2_ab62352_HepG2_Rep1 ENCFF002EAY Illumina Genome Analyzer IIx 2016-10-09T17:33:54.184168+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4YZQ0jv1g5yGjfvVx0PJk ENCSR488EES https://www.encodeproject.org/experiments/ENCSR488EES transcription factor NFE2L2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF063AFU https://www.encodeproject.org/files/ENCFF063AFU/@@download/ENCFF063AFU.bam ENCFF911VGR https://www.encodeproject.org/files/ENCFF911VGR/@@download/ENCFF911VGR.bam 33.4 M 0 32.9 M 0.984 SE 36 36 native 0.0 M 24.8 M 23.9 M 0.716 0.97 0.97 33.87 120 1.08 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/eceaa735-993f-4faa-b543-084939c80083/@@download/cross_correlation_plot/ENCFF002EAS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB751OIQ michael-snyder:Nrf2_ab62352_HepG2_Rep2 ENCFF002EAS Illumina Genome Analyzer IIx 2016-10-09T17:33:59.846839+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Ybj0jv1zBYbxYJ5zzzb5 ENCSR145BHD https://www.encodeproject.org/experiments/ENCSR145BHD transcription factor NFRKB-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF407YXS https://www.encodeproject.org/files/ENCFF407YXS/@@download/ENCFF407YXS.bam ENCFF286UHQ https://www.encodeproject.org/files/ENCFF286UHQ/@@download/ENCFF286UHQ.bam 61.9 M 0 60.0 M 0.970 PE 100 100 native 25.4 M 0.0 M 24.7 M 0.797 0.97 0.97 35.36 210 1.06 4.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f1e802e-60a8-40db-8e97-cbab6eef68f9/@@download/cross_correlation_plot/ENCFF780PZZENCFF487XNJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB896JFB michael-snyder:L-1730 "ENCFF780PZZ,ENCFF487XNJ" HiSeq 2000 2016-10-09T17:13:57.568824+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jB80jv1XvFGkBjjfjPy5 ENCSR145BHD https://www.encodeproject.org/experiments/ENCSR145BHD transcription factor NFRKB-human HepG2 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF151AWK https://www.encodeproject.org/files/ENCFF151AWK/@@download/ENCFF151AWK.bam ENCFF811RKC https://www.encodeproject.org/files/ENCFF811RKC/@@download/ENCFF811RKC.bam 76.5 M 0 74.1 M 0.969 PE 100 100 native 31.5 M 0.0 M 30.6 M 0.800 0.97 0.97 35.22 210 1.05 4.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/032fe65e-e4fb-4c31-83a5-755597dee6c9/@@download/cross_correlation_plot/ENCFF318DFZENCFF244KAZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB615KYN michael-snyder:L-1734 "ENCFF318DFZ,ENCFF244KAZ" HiSeq 2000 2016-10-09T17:14:48.206494+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jFj0jv1XvFGkBjjfjPyK ENCSR476BQA https://www.encodeproject.org/experiments/ENCSR476BQA "RNA binding protein,transcription factor" NONO-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF435ZLQ https://www.encodeproject.org/files/ENCFF435ZLQ/@@download/ENCFF435ZLQ.bam ENCFF938ZOQ https://www.encodeproject.org/files/ENCFF938ZOQ/@@download/ENCFF938ZOQ.bam 83.4 M 0 80.0 M 0.959 PE 100 100 native 33.8 M 0.0 M 32.9 M 0.788 0.97 0.97 38.00 135 1.09 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd6d9372-edf7-40a1-bb61-fa527598825e/@@download/cross_correlation_plot/ENCFF939DJPENCFF450SIM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB588QHL michael-snyder:L-2302 "ENCFF939DJP,ENCFF450SIM" HiSeq 2000 2017-01-31T17:47:10.400404+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27xpK80369PFk0Y66PvZ5yG ENCSR476BQA https://www.encodeproject.org/experiments/ENCSR476BQA "RNA binding protein,transcription factor" NONO-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF464HDX https://www.encodeproject.org/files/ENCFF464HDX/@@download/ENCFF464HDX.bam ENCFF311FUR https://www.encodeproject.org/files/ENCFF311FUR/@@download/ENCFF311FUR.bam 60.0 M 0 58.3 M 0.971 PE 100 100 native 25.1 M 0.0 M 24.7 M 0.824 0.99 0.99 76.83 175 1.07 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/68802a52-01fb-41f5-b33e-02e33e614304/@@download/cross_correlation_plot/ENCFF047PYSENCFF320PNH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB390ZZL michael-snyder:L-2303 "ENCFF047PYS,ENCFF320PNH" HiSeq 2000 2017-01-31T17:44:55.984437+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27xpZQ036916F1fJ0XbGPPq ENCSR000EEV https://www.encodeproject.org/experiments/ENCSR000EEV transcription factor NR3C1-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EEH https://www.encodeproject.org/experiments/ENCSR000EEH transcription factor NRF1-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF787RXW https://www.encodeproject.org/files/ENCFF787RXW/@@download/ENCFF787RXW.bam ENCFF559RYJ https://www.encodeproject.org/files/ENCFF559RYJ/@@download/ENCFF559RYJ.bam 27.8 M 0 22.4 M 0.806 SE 36 36 native 0.0 M 16.8 M 15.4 M 0.554 0.92 0.92 11.69 130 1.03 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f629820-f7d9-4faf-ad32-8f6fbfcfac78/@@download/cross_correlation_plot/ENCFF000XVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAH ENCFF000XVP Illumina Genome Analyzer 2016-12-11T03:25:51.943577+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164XYQ03697yz601ypVJ3JX ENCSR000EEH https://www.encodeproject.org/experiments/ENCSR000EEH transcription factor NRF1-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF101XWQ https://www.encodeproject.org/files/ENCFF101XWQ/@@download/ENCFF101XWQ.bam ENCFF991AEO https://www.encodeproject.org/files/ENCFF991AEO/@@download/ENCFF991AEO.bam 28.5 M 0 22.7 M 0.798 SE 36 36 native 0.0 M 16.2 M 15.7 M 0.552 0.97 0.97 34.56 125 1.03 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/92f64c6b-c655-493d-8b2d-3b656f517397/@@download/cross_correlation_plot/ENCFF000XVR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANM ENCFF000XVR Illumina Genome Analyzer 2016-12-11T03:30:59.237851+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Xj803699Z3Y8493qbq37 ENCSR648HOY https://www.encodeproject.org/experiments/ENCSR648HOY transcription factor PAX8-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR019KPC https://www.encodeproject.org/experiments/ENCSR019KPC transcription factor PLRG1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF943EOC https://www.encodeproject.org/files/ENCFF943EOC/@@download/ENCFF943EOC.bam ENCFF934BVW https://www.encodeproject.org/files/ENCFF934BVW/@@download/ENCFF934BVW.bam 77.4 M 0 74.7 M 0.966 PE 100 100 native 31.3 M 0.0 M 30.9 M 0.799 0.99 0.99 82.93 185 1.06 4.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/38ca6df0-9fa0-4965-9f4f-8962ea00f93e/@@download/cross_correlation_plot/ENCFF572KODENCFF860XRV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB548MBI michael-snyder:L-2131 "ENCFF572KOD,ENCFF860XRV" HiSeq 2000 2016-10-09T17:16:45.318962+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xX80jv1xPyfX78Yz4gb5 ENCSR019KPC https://www.encodeproject.org/experiments/ENCSR019KPC transcription factor PLRG1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF341JFD https://www.encodeproject.org/files/ENCFF341JFD/@@download/ENCFF341JFD.bam ENCFF387YTM https://www.encodeproject.org/files/ENCFF387YTM/@@download/ENCFF387YTM.bam 67.8 M 0 65.5 M 0.965 PE 100 100 native 27.3 M 0.0 M 27.0 M 0.796 0.99 0.99 80.72 185 1.06 4.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/102fb176-a9a7-437e-b2cb-54a973e6dd11/@@download/cross_correlation_plot/ENCFF924MPJENCFF460XNN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB489LUV michael-snyder:L-2132 "ENCFF460XNN,ENCFF924MPJ" HiSeq 2000 2016-10-09T17:15:57.941611+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xZ80jv1XvFGkBjjfjQ3v ENCSR000EEM https://www.encodeproject.org/experiments/ENCSR000EEM transcription factor POLR2A-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF467DEL https://www.encodeproject.org/files/ENCFF467DEL/@@download/ENCFF467DEL.bam ENCFF220XSM https://www.encodeproject.org/files/ENCFF220XSM/@@download/ENCFF220XSM.bam 26.7 M 0 19.4 M 0.725 SE 36 36 native 0.0 M 13.9 M 13.3 M 0.496 0.95 0.96 33.40 115 1.58 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/d39b2937-53d6-4d0c-ba44-def3766b2f09/@@download/cross_correlation_plot/ENCFF000XWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALH ENCFF000XWJ Illumina Genome Analyzer 2016-12-11T04:55:38.014209+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166B5Q0369BgG8x1ygv1Xg7 ENCSR000EEM https://www.encodeproject.org/experiments/ENCSR000EEM transcription factor POLR2A-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF807LWH https://www.encodeproject.org/files/ENCFF807LWH/@@download/ENCFF807LWH.bam ENCFF377NEI https://www.encodeproject.org/files/ENCFF377NEI/@@download/ENCFF377NEI.bam 29.8 M 0 23.5 M 0.788 SE 36 36 native 0.0 M 17.1 M 16.2 M 0.546 0.95 0.96 33.46 115 1.46 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/0239ca9b-0fc7-4d45-965e-22c3de119d13/@@download/cross_correlation_plot/ENCFF000XWR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEK ENCFF000XWR Illumina Genome Analyzer 2016-12-11T04:59:11.365808+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166BF00369BJyPz9fb9qYXG ENCSR000EEP https://www.encodeproject.org/experiments/ENCSR000EEP transcription factor POLR2A-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EDX https://www.encodeproject.org/experiments/ENCSR000EDX "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF451VMR https://www.encodeproject.org/files/ENCFF451VMR/@@download/ENCFF451VMR.bam ENCFF244SHN https://www.encodeproject.org/files/ENCFF244SHN/@@download/ENCFF244SHN.bam 24.1 M 0 22.5 M 0.934 SE 36 36 native 0.0 M 17.3 M 16.8 M 0.698 0.98 0.98 41.65 110 1.04 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/b87779bb-d64f-4527-b8af-583dd998963e/@@download/cross_correlation_plot/ENCFF000XXC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGE ENCFF000XXC Illumina Genome Analyzer 2016-12-12T17:21:04.850043+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16245Q03699Z3Y8493qbp0j ENCSR000EDX https://www.encodeproject.org/experiments/ENCSR000EDX "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF628GCY https://www.encodeproject.org/files/ENCFF628GCY/@@download/ENCFF628GCY.bam ENCFF411YGP https://www.encodeproject.org/files/ENCFF411YGP/@@download/ENCFF411YGP.bam 31.3 M 0 27.9 M 0.891 SE 36 36 native 0.0 M 21.5 M 21.0 M 0.669 0.98 0.98 45.72 80 1.05 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/e39a2921-648a-488d-bf6c-aea45b09a12a/@@download/cross_correlation_plot/ENCFF000XXB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGD ENCFF000XXB Illumina Genome Analyzer 2016-12-12T17:21:55.193423+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16249j03697vfpg2qKbyZ4g ENCSR000EEQ https://www.encodeproject.org/experiments/ENCSR000EEQ "RNA binding protein,transcription factor" PPARGC1A-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EEN https://www.encodeproject.org/experiments/ENCSR000EEN control rabbit-IgG-control-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF165KZY https://www.encodeproject.org/files/ENCFF165KZY/@@download/ENCFF165KZY.bam ENCFF176RYY https://www.encodeproject.org/files/ENCFF176RYY/@@download/ENCFF176RYY.bam 56.4 M 0 45.2 M 0.800 SE 36 36 native 0.0 M 33.0 M 31.6 M 0.560 0.96 0.96 24.53 115 1.02 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8f7cbd6-d9ad-4d96-a277-a89e74956291/@@download/cross_correlation_plot/ENCFF000XTF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB018USI ENCFF000XTF Illumina Genome Analyzer 2016-10-29T18:05:56.851569+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xyZ00jv1X3pJJqk9y09kp ENCSR770GTP https://www.encodeproject.org/experiments/ENCSR770GTP control rabbit-IgG-control-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF275AKX https://www.encodeproject.org/files/ENCFF275AKX/@@download/ENCFF275AKX.bam ENCFF045HFN https://www.encodeproject.org/files/ENCFF045HFN/@@download/ENCFF045HFN.bam 75.2 M 0 73.8 M 0.981 PE 100 None 32.7 M 0.0 M 31.3 M 0.833 0.96 0.96 23.73 255 1.06 9.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/24786498-b172-46d4-bf90-3af32fd721d4/@@download/cross_correlation_plot/ENCFF002EIAENCFF002EID.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB724LMY michael-snyder:733_B_TruSeq_GATCAG "ENCFF002EIA,ENCFF002EID" HiSeq 2000 2016-05-06T18:10:55.668238+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqZF80369GkFPvq42zg1v5 ENCSR770GTP https://www.encodeproject.org/experiments/ENCSR770GTP control rabbit-IgG-control-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF508JSQ https://www.encodeproject.org/files/ENCFF508JSQ/@@download/ENCFF508JSQ.bam ENCFF150LPL https://www.encodeproject.org/files/ENCFF150LPL/@@download/ENCFF150LPL.bam 83.8 M 0 81.7 M 0.975 PE 100 None 36.3 M 0.0 M 35.0 M 0.834 0.96 0.96 27.59 235 1.05 7.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/a59468ea-1fcb-4731-863e-6d861563a550/@@download/cross_correlation_plot/ENCFF002EIBENCFF002EIC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB507TWK michael-snyder:733_B_TruSeq_ATCACG "ENCFF002EIB,ENCFF002EIC" HiSeq 2000 2016-05-06T18:11:13.657280+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqZJj03690j2jgp42pQ34V ENCSR000EEG https://www.encodeproject.org/experiments/ENCSR000EEG transcription factor RAD21-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF200JRU https://www.encodeproject.org/files/ENCFF200JRU/@@download/ENCFF200JRU.bam ENCFF143MIJ https://www.encodeproject.org/files/ENCFF143MIJ/@@download/ENCFF143MIJ.bam 27.4 M 0 22.8 M 0.831 SE 36 36 native 0.0 M 17.3 M 16.7 M 0.609 0.97 0.97 36.50 120 1.47 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca2d19ba-bde3-4ec4-896f-6dcc456e1e20/@@download/cross_correlation_plot/ENCFF000XXK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJS ENCFF000XXK Illumina Genome Analyzer 2016-12-10T20:26:26.180235+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Ygj03697xKX68qyy2k60 ENCSR000EEG https://www.encodeproject.org/experiments/ENCSR000EEG transcription factor RAD21-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF942GFS https://www.encodeproject.org/files/ENCFF942GFS/@@download/ENCFF942GFS.bam ENCFF461CLC https://www.encodeproject.org/files/ENCFF461CLC/@@download/ENCFF461CLC.bam 22.6 M 0 20.2 M 0.894 SE 36 36 native 0.0 M 15.6 M 15.0 M 0.665 0.97 0.97 37.87 120 1.72 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/846691f0-de6d-49b7-a799-eb451d292f7f/@@download/cross_correlation_plot/ENCFF000XXL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASJ ENCFF000XXL Illumina Genome Analyzer 2016-12-10T20:22:09.575095+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Yvj0369BV55708G9qb93 ENCSR081WLS https://www.encodeproject.org/experiments/ENCSR081WLS transcription factor RAD51-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF304JKT https://www.encodeproject.org/files/ENCFF304JKT/@@download/ENCFF304JKT.bam ENCFF360DVN https://www.encodeproject.org/files/ENCFF360DVN/@@download/ENCFF360DVN.bam 60.5 M 0 56.4 M 0.934 PE 100 100 native 24.1 M 0.0 M 23.4 M 0.773 0.97 0.97 34.47 215 1.08 3.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa7bd577-1307-4cac-80ed-5f2b2f40e2df/@@download/cross_correlation_plot/ENCFF228FHJENCFF707YZN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB586LIO michael-snyder:L-2199 "ENCFF228FHJ,ENCFF707YZN" HiSeq 2000 2016-10-09T17:39:21.093950+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kg80jv1XpBpGXQxqxY8k ENCSR081WLS https://www.encodeproject.org/experiments/ENCSR081WLS transcription factor RAD51-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF451NTQ https://www.encodeproject.org/files/ENCFF451NTQ/@@download/ENCFF451NTQ.bam ENCFF389GRV https://www.encodeproject.org/files/ENCFF389GRV/@@download/ENCFF389GRV.bam 55.8 M 0 52.3 M 0.936 PE 100 100 native 22.5 M 0.0 M 21.8 M 0.782 0.97 0.97 34.98 220 1.15 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/e331204c-e07c-460d-a3f2-696a9ca8c6eb/@@download/cross_correlation_plot/ENCFF352YZEENCFF296LZL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB215GBH michael-snyder:L-2200 "ENCFF352YZE,ENCFF296LZL" HiSeq 2000 2016-10-09T17:37:43.706912+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kkQ0jv1b6Q2yZ51Zb5Fj ENCSR000EDQ https://www.encodeproject.org/experiments/ENCSR000EDQ transcription factor RCOR1-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF807TIN https://www.encodeproject.org/files/ENCFF807TIN/@@download/ENCFF807TIN.bam ENCFF387LRB https://www.encodeproject.org/files/ENCFF387LRB/@@download/ENCFF387LRB.bam 30.1 M 0 29.5 M 0.981 SE 36 36 native 0.0 M 22.1 M 21.7 M 0.719 0.98 0.98 60.40 95 1.04 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/34c7dca3-9310-4313-bb68-188dbe4815df/@@download/cross_correlation_plot/ENCFF000XQW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJD ENCFF000XQW Illumina Genome Analyzer 2016-12-11T03:59:42.422312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164v8Q0369PvYp91zK1PxJ2 ENCSR000EDQ https://www.encodeproject.org/experiments/ENCSR000EDQ transcription factor RCOR1-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF535OVY https://www.encodeproject.org/files/ENCFF535OVY/@@download/ENCFF535OVY.bam ENCFF353CSF https://www.encodeproject.org/files/ENCFF353CSF/@@download/ENCFF353CSF.bam 30.2 M 0 29.2 M 0.968 SE 36 36 native 0.0 M 22.2 M 21.8 M 0.723 0.99 0.99 81.77 85 1.02 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f3aef72-7995-4d6a-a522-283b6f6e707f/@@download/cross_correlation_plot/ENCFF000XQY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVI ENCFF000XQY Illumina Genome Analyzer 2016-12-11T04:01:39.759919+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164vJ00369KbxV61z4GFvP6 ENCSR000EEA https://www.encodeproject.org/experiments/ENCSR000EEA transcription factor RFX5-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF569JCK https://www.encodeproject.org/files/ENCFF569JCK/@@download/ENCFF569JCK.bam ENCFF321PFO https://www.encodeproject.org/files/ENCFF321PFO/@@download/ENCFF321PFO.bam 31.9 M 0 28.5 M 0.893 SE 36 36 native 0.0 M 21.4 M 20.1 M 0.629 0.94 0.96 25.37 115 1.11 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/ffe690c8-465f-496a-8f5e-248e33acb959/@@download/cross_correlation_plot/ENCFF000XXZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGX ENCFF000XXZ Illumina Genome Analyzer 2016-12-11T04:15:47.944244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165JX803695yqvv8q311QQ8 ENCSR000EEA https://www.encodeproject.org/experiments/ENCSR000EEA transcription factor RFX5-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF380VYQ https://www.encodeproject.org/files/ENCFF380VYQ/@@download/ENCFF380VYQ.bam ENCFF743FPG https://www.encodeproject.org/files/ENCFF743FPG/@@download/ENCFF743FPG.bam 28.0 M 0 25.7 M 0.916 SE 36 36 native 0.0 M 18.8 M 18.0 M 0.640 0.96 0.97 41.08 135 1.11 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6f80a3b-1c00-440b-9d01-a21e846d16e6/@@download/cross_correlation_plot/ENCFF000XXX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAJ ENCFF000XXX Illumina Genome Analyzer 2016-12-11T04:13:50.181949+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Jg80369BJyPz9fb9qYBk ENCSR523XCR https://www.encodeproject.org/experiments/ENCSR523XCR "transcription factor,chromatin remodeller" RNF2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF447ZWG https://www.encodeproject.org/files/ENCFF447ZWG/@@download/ENCFF447ZWG.bam ENCFF534RDA https://www.encodeproject.org/files/ENCFF534RDA/@@download/ENCFF534RDA.bam 70.4 M 0 69.0 M 0.979 PE 100 100 native 30.7 M 0.0 M 30.0 M 0.852 0.98 0.98 47.53 265 1.07 5.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/150e5709-c1d2-4089-b2b8-cc53e20e80dd/@@download/cross_correlation_plot/ENCFF361RFXENCFF786WVF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB527SUL michael-snyder:L-493 "ENCFF361RFX,ENCFF786WVF" HiSeq 2000 2016-10-09T17:38:57.748893+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5ybj0jv1QZp37BGvK2BJJ ENCSR523XCR https://www.encodeproject.org/experiments/ENCSR523XCR "transcription factor,chromatin remodeller" RNF2-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF287PTX https://www.encodeproject.org/files/ENCFF287PTX/@@download/ENCFF287PTX.bam ENCFF850MPH https://www.encodeproject.org/files/ENCFF850MPH/@@download/ENCFF850MPH.bam 40.2 M 0 39.4 M 0.981 PE 100 100 native 17.3 M 0.0 M 17.0 M 0.845 0.98 0.98 47.04 205 1.12 6.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/605203ac-077c-438f-83c1-477fc86f4bdd/@@download/cross_correlation_plot/ENCFF479BPNENCFF163KYP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB726MYU michael-snyder:L-135 "ENCFF163KYP,ENCFF479BPN" HiSeq 2000 2016-10-09T17:36:07.663387+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5yk00jv1QkfFX8V1vJb9v ENCSR452YHM https://www.encodeproject.org/experiments/ENCSR452YHM transcription factor SIN3B-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF459UCK https://www.encodeproject.org/files/ENCFF459UCK/@@download/ENCFF459UCK.bam ENCFF779HZW https://www.encodeproject.org/files/ENCFF779HZW/@@download/ENCFF779HZW.bam 30.9 M 0 30.4 M 0.983 SE 36 36 native 0.0 M 23.7 M 22.6 M 0.732 0.96 0.96 25.69 125 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe996560-069d-47a4-89a7-6bd038fd717e/@@download/cross_correlation_plot/ENCFF002EDW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB165BOU michael-snyder:Sin3B_sc-13145_HepG2_Rep1 ENCFF002EDW Illumina Genome Analyzer IIx 2016-10-09T17:02:29.447476+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66J80jv1q5825v91XY317 ENCSR452YHM https://www.encodeproject.org/experiments/ENCSR452YHM transcription factor SIN3B-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF125NKO https://www.encodeproject.org/files/ENCFF125NKO/@@download/ENCFF125NKO.bam ENCFF004EMX https://www.encodeproject.org/files/ENCFF004EMX/@@download/ENCFF004EMX.bam 35.1 M 0 34.1 M 0.972 SE 36 36 native 0.0 M 25.9 M 25.1 M 0.715 0.97 0.97 35.72 95 1.05 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/2234bdc4-a8a9-4e58-a383-65d7091f66de/@@download/cross_correlation_plot/ENCFF002EDY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB320JAS michael-snyder:Sin3B_sc-13145_HepG2_Rep2 ENCFF002EDY Illumina Genome Analyzer IIx 2016-10-09T17:01:47.928193+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66P80jv1bJQB62j8VV6PB ENCSR887LYD https://www.encodeproject.org/experiments/ENCSR887LYD transcription factor SMARCC2-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF141NLB https://www.encodeproject.org/files/ENCFF141NLB/@@download/ENCFF141NLB.bam ENCFF172CMH https://www.encodeproject.org/files/ENCFF172CMH/@@download/ENCFF172CMH.bam 97.0 M 0 91.0 M 0.938 PE 100 100 native 39.8 M 0.0 M 36.4 M 0.750 0.91 0.91 11.61 150 1.05 3.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/1333e22d-43a8-4def-bd18-75cc03c0bff3/@@download/cross_correlation_plot/ENCFF827KUPENCFF210SAO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB713CKP michael-snyder:L-3511 "ENCFF827KUP,ENCFF210SAO" HiSeq 4000 2017-06-23T02:39:42.400979+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560b9803695V91q323G63y5 ENCSR887LYD https://www.encodeproject.org/experiments/ENCSR887LYD transcription factor SMARCC2-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF865RIS https://www.encodeproject.org/files/ENCFF865RIS/@@download/ENCFF865RIS.bam ENCFF449JJK https://www.encodeproject.org/files/ENCFF449JJK/@@download/ENCFF449JJK.bam 96.8 M 0 93.1 M 0.961 PE 100 100 native 40.5 M 0.0 M 36.3 M 0.750 0.90 0.90 9.46 165 1.05 4.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/f994f10e-12f7-42c6-8772-f3151b825b83/@@download/cross_correlation_plot/ENCFF753GKCENCFF595RYN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB228NLK michael-snyder:L-3512 "ENCFF595RYN,ENCFF753GKC" HiSeq 4000 2017-06-23T02:56:34.545013+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560bGj0369FYPYg311kYBZg ENCSR968QDP https://www.encodeproject.org/experiments/ENCSR968QDP transcription factor SMARCE1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF675HLZ https://www.encodeproject.org/files/ENCFF675HLZ/@@download/ENCFF675HLZ.bam ENCFF830BJO https://www.encodeproject.org/files/ENCFF830BJO/@@download/ENCFF830BJO.bam 95.2 M 0 87.2 M 0.916 PE 100 100 native 35.6 M 0.0 M 33.0 M 0.692 0.93 0.93 13.36 125 1.07 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/148b6eab-0f59-4d9d-9742-6747c47bf2da/@@download/cross_correlation_plot/ENCFF985OFUENCFF466FAG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB470QDO michael-snyder:L-3498 "ENCFF466FAG,ENCFF985OFU" HiSeq 4000 2017-06-06T18:20:00.825968+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3VK80369P28ZF91J6pJ7B ENCSR968QDP https://www.encodeproject.org/experiments/ENCSR968QDP transcription factor SMARCE1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF224ODF https://www.encodeproject.org/files/ENCFF224ODF/@@download/ENCFF224ODF.bam ENCFF624OSM https://www.encodeproject.org/files/ENCFF624OSM/@@download/ENCFF624OSM.bam 87.9 M 0 78.5 M 0.892 PE 100 100 native 32.3 M 0.0 M 29.8 M 0.678 0.92 0.92 12.48 130 1.07 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/df39341a-275c-4d49-ba55-3baec4c20acc/@@download/cross_correlation_plot/ENCFF637JXPENCFF107YXM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB794TBO michael-snyder:L-3499 "ENCFF637JXP,ENCFF107YXM" HiSeq 4000 2017-06-06T18:19:18.873535+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3VQ80369ByZ0V9126fK3j ENCSR000EDW https://www.encodeproject.org/experiments/ENCSR000EDW transcription factor SMC3-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF176NKY https://www.encodeproject.org/files/ENCFF176NKY/@@download/ENCFF176NKY.bam ENCFF191XVW https://www.encodeproject.org/files/ENCFF191XVW/@@download/ENCFF191XVW.bam 30.3 M 0 28.3 M 0.934 SE 36 36 native 0.0 M 21.6 M 20.9 M 0.689 0.97 0.97 37.16 120 1.09 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/41d6fb8e-0e1e-4f1e-ad89-0bf08f9f4120/@@download/cross_correlation_plot/ENCFF000XXY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANC ENCFF000XXY Illumina Genome Analyzer 2016-12-11T02:53:51.422158+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163zkQ03699Z3Y8493qbpzy ENCSR000EDW https://www.encodeproject.org/experiments/ENCSR000EDW transcription factor SMC3-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF363YBM https://www.encodeproject.org/files/ENCFF363YBM/@@download/ENCFF363YBM.bam ENCFF037GJA https://www.encodeproject.org/files/ENCFF037GJA/@@download/ENCFF037GJA.bam 29.1 M 0 25.8 M 0.889 SE 36 36 native 0.0 M 19.6 M 19.0 M 0.653 0.97 0.97 41.83 115 1.31 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/73f056c2-62a7-4d39-8136-8c001ad60d02/@@download/cross_correlation_plot/ENCFF000XYC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALS ENCFF000XYC Illumina Genome Analyzer 2016-12-11T02:48:03.813640+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163zy003697K4B1J71pxzxq ENCSR217JXX https://www.encodeproject.org/experiments/ENCSR217JXX "RNA binding protein,transcription factor" SNIP1-human HepG2 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR543BVU https://www.encodeproject.org/experiments/ENCSR543BVU transcription factor SOX6-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF076DBU https://www.encodeproject.org/files/ENCFF076DBU/@@download/ENCFF076DBU.bam ENCFF546AYS https://www.encodeproject.org/files/ENCFF546AYS/@@download/ENCFF546AYS.bam 70.5 M 0 67.9 M 0.964 PE 100 100 native 28.7 M 0.0 M 28.4 M 0.806 0.99 0.99 100.14 220 1.05 5.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/8c1905d9-4b0e-4937-9c59-6a249e906c3e/@@download/cross_correlation_plot/ENCFF031GLYENCFF835JHL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB215IJL michael-snyder:L-2185 "ENCFF031GLY,ENCFF835JHL" HiSeq 2000 2016-10-09T17:16:25.916894+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3y280jv1g5yGjfvVx0Kpg ENCSR543BVU https://www.encodeproject.org/experiments/ENCSR543BVU transcription factor SOX6-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF767TEU https://www.encodeproject.org/files/ENCFF767TEU/@@download/ENCFF767TEU.bam ENCFF493KMB https://www.encodeproject.org/files/ENCFF493KMB/@@download/ENCFF493KMB.bam 66.5 M 0 64.3 M 0.967 PE 100 100 native 27.4 M 0.0 M 26.9 M 0.808 0.98 0.98 56.54 220 1.05 4.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/813f4f28-06fd-4f15-a72a-95da364e728c/@@download/cross_correlation_plot/ENCFF020AAAENCFF993JOH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB434DGW michael-snyder:L-2186 "ENCFF993JOH,ENCFF020AAA" HiSeq 2000 2016-10-09T17:15:05.994224+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3y400jv1QxJBfj5Zb2pQ6 ENCSR334KIQ https://www.encodeproject.org/experiments/ENCSR334KIQ transcription factor SP1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF720ANK https://www.encodeproject.org/files/ENCFF720ANK/@@download/ENCFF720ANK.bam ENCFF378KCE https://www.encodeproject.org/files/ENCFF378KCE/@@download/ENCFF378KCE.bam 60.3 M 0 58.1 M 0.963 PE 100 100 native 24.3 M 0.0 M 24.0 M 0.797 0.99 0.99 103.13 230 1.05 4.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/a950c515-fca1-4e20-9dae-494f1bdff843/@@download/cross_correlation_plot/ENCFF042XDVENCFF324PPG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB748XVS michael-snyder:L-1766 "ENCFF042XDV,ENCFF324PPG" HiSeq 2000 2016-10-09T17:37:45.471457+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5z4j0jv1QZp37BGvK2BJg ENCSR334KIQ https://www.encodeproject.org/experiments/ENCSR334KIQ transcription factor SP1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF875FET https://www.encodeproject.org/files/ENCFF875FET/@@download/ENCFF875FET.bam ENCFF783UJA https://www.encodeproject.org/files/ENCFF783UJA/@@download/ENCFF783UJA.bam 68.7 M 0 66.1 M 0.962 PE 100 100 native 27.5 M 0.0 M 26.9 M 0.783 0.98 0.98 49.84 200 1.05 5.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/86f6d136-3ed1-406b-aa91-c1955f987e7a/@@download/cross_correlation_plot/ENCFF124RBKENCFF554IYL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB382UET michael-snyder:L-1767 "ENCFF124RBK,ENCFF554IYL" HiSeq 2000 2016-10-09T17:38:21.884673+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5z780jv1QkfFX8V1vJbBk ENCSR000EEO https://www.encodeproject.org/experiments/ENCSR000EEO transcription factor SREBF1-human HepG2 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR771GTF https://www.encodeproject.org/experiments/ENCSR771GTF "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF598KSY https://www.encodeproject.org/files/ENCFF598KSY/@@download/ENCFF598KSY.bam ENCFF373AWX https://www.encodeproject.org/files/ENCFF373AWX/@@download/ENCFF373AWX.bam 25.6 M 0 25.3 M 0.985 SE 36 36 native 0.0 M 19.3 M 18.7 M 0.728 0.97 0.97 34.61 115 1.02 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/807f90cf-b098-4ab2-9156-c723e4244d09/@@download/cross_correlation_plot/ENCFF002EEA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB264IUF michael-snyder:SUZ12_3737_HepG2_Rep1 ENCFF002EEA Illumina Genome Analyzer IIx 2016-10-09T17:33:31.758329+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4b200jv1g5yGjfvVx0PP5 ENCSR771GTF https://www.encodeproject.org/experiments/ENCSR771GTF "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF136LXS https://www.encodeproject.org/files/ENCFF136LXS/@@download/ENCFF136LXS.bam ENCFF894TPH https://www.encodeproject.org/files/ENCFF894TPH/@@download/ENCFF894TPH.bam 21.8 M 0 21.6 M 0.990 SE 36 36 native 0.0 M 16.3 M 16.0 M 0.734 0.98 0.99 75.17 110 1.09 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cca5e88-6f75-4675-b617-12172753689e/@@download/cross_correlation_plot/ENCFF002EEF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB305KTI michael-snyder:SUZ12_3737_HepG2_Rep2 ENCFF002EEF Illumina Genome Analyzer IIx 2016-10-09T17:33:55.197366+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4b3Q0jv1f60PxyZ9JGPYp ENCSR000EEL https://www.encodeproject.org/experiments/ENCSR000EEL transcription factor TBP-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF956OLR https://www.encodeproject.org/files/ENCFF956OLR/@@download/ENCFF956OLR.bam ENCFF570NNG https://www.encodeproject.org/files/ENCFF570NNG/@@download/ENCFF570NNG.bam 28.4 M 0 22.8 M 0.801 SE 36 36 native 0.0 M 16.3 M 15.6 M 0.549 0.96 0.97 46.34 140 1.20 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/f20f19ed-5103-4f2e-a3c9-f8c6ca561a91/@@download/cross_correlation_plot/ENCFF000XZL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACC ENCFF000XZL Illumina Genome Analyzer 2016-12-12T17:21:52.543768+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1621VQ0369PJ8BP63qf1FVP ENCSR000EEL https://www.encodeproject.org/experiments/ENCSR000EEL transcription factor TBP-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF031LWP https://www.encodeproject.org/files/ENCFF031LWP/@@download/ENCFF031LWP.bam ENCFF966RQD https://www.encodeproject.org/files/ENCFF966RQD/@@download/ENCFF966RQD.bam 25.1 M 0 21.6 M 0.861 SE 36 36 native 0.0 M 15.5 M 14.8 M 0.590 0.96 0.97 48.90 140 1.27 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/71f9c6f6-5340-4ca9-ba7a-e275607dcb21/@@download/cross_correlation_plot/ENCFF000XZI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACD ENCFF000XZI Illumina Genome Analyzer 2016-12-12T17:21:07.565975+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1621bj0369Bxb30J6x5bYvV ENCSR238QRG https://www.encodeproject.org/experiments/ENCSR238QRG transcription factor TBX3-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF106TAT https://www.encodeproject.org/files/ENCFF106TAT/@@download/ENCFF106TAT.bam ENCFF121JNK https://www.encodeproject.org/files/ENCFF121JNK/@@download/ENCFF121JNK.bam 234.6 M 0 226.3 M 0.965 PE 100 100 native 97.3 M 0.0 M 87.4 M 0.745 0.90 0.90 9.81 250 1.03 3.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/36424a0c-f03f-4ec2-97d1-ed9ada283862/@@download/cross_correlation_plot/ENCFF388ZHDENCFF606KRS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB611SYU michael-snyder:L-1886 "ENCFF606KRS,ENCFF388ZHD" HiSeq 4000 2016-10-27T22:40:24.677760+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfqj03694q32PPxBJ6ZyZ ENCSR238QRG https://www.encodeproject.org/experiments/ENCSR238QRG transcription factor TBX3-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF228ZGU https://www.encodeproject.org/files/ENCFF228ZGU/@@download/ENCFF228ZGU.bam ENCFF479RQX https://www.encodeproject.org/files/ENCFF479RQX/@@download/ENCFF479RQX.bam 96.7 M 0 93.5 M 0.966 PE 100 100 native 39.9 M 0.0 M 37.8 M 0.781 0.95 0.95 18.62 235 1.05 3.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/54447326-0c60-4b62-8d7f-3cba6d9f429c/@@download/cross_correlation_plot/ENCFF845RNPENCFF642JDC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB802CQC michael-snyder:L-1887 "ENCFF642JDC,ENCFF845RNP" HiSeq 4000 2016-10-27T22:28:52.132243+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfz003697KPkyX9BPQF2X ENCSR605YWG https://www.encodeproject.org/experiments/ENCSR605YWG transcription factor TBX3-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF862DYV https://www.encodeproject.org/files/ENCFF862DYV/@@download/ENCFF862DYV.bam ENCFF583TPJ https://www.encodeproject.org/files/ENCFF583TPJ/@@download/ENCFF583TPJ.bam 67.5 M 0 66.0 M 0.978 PE 100 100 native 28.8 M 0.0 M 28.2 M 0.834 0.98 0.98 46.40 225 1.06 4.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/04879bfa-aac0-46bb-95ed-8815c03fe799/@@download/cross_correlation_plot/ENCFF521BUZENCFF993ZKD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB919FIG michael-snyder:L-18 "ENCFF993ZKD,ENCFF521BUZ" HiSeq 2000 2016-10-09T17:11:55.056140+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kYj0jv1f60PxyZ9JGKpZ ENCSR605YWG https://www.encodeproject.org/experiments/ENCSR605YWG transcription factor TBX3-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF343FIG https://www.encodeproject.org/files/ENCFF343FIG/@@download/ENCFF343FIG.bam ENCFF205IXQ https://www.encodeproject.org/files/ENCFF205IXQ/@@download/ENCFF205IXQ.bam 72.1 M 0 69.8 M 0.969 PE 100 100 native 29.8 M 0.0 M 29.4 M 0.817 0.99 0.99 88.59 220 1.05 4.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d1bf6af-f504-403e-9992-15ce0221576a/@@download/cross_correlation_plot/ENCFF428YAWENCFF173TVY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB711ESZ michael-snyder:L-1932 "ENCFF428YAW,ENCFF173TVY" HiSeq 2000 2016-10-09T17:12:58.636760+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kb80jv1g5yGjfvVx0KbZ ENCSR894SXR https://www.encodeproject.org/experiments/ENCSR894SXR transcription factor TCF12-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF407CPT https://www.encodeproject.org/files/ENCFF407CPT/@@download/ENCFF407CPT.bam ENCFF731TFY https://www.encodeproject.org/files/ENCFF731TFY/@@download/ENCFF731TFY.bam 114.8 M 0 111.6 M 0.972 PE 100 100 native 48.3 M 0.0 M 44.8 M 0.780 0.93 0.93 13.57 140 1.04 2.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/402ef268-114a-4d08-8fb1-c64ee6a3c99e/@@download/cross_correlation_plot/ENCFF791QOWENCFF594LDJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB757YPJ michael-snyder:L-3456 "ENCFF594LDJ,ENCFF791QOW" HiSeq 4000 2017-06-06T18:25:54.122952+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Py00369BkKBG9095vxxz ENCSR894SXR https://www.encodeproject.org/experiments/ENCSR894SXR transcription factor TCF12-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF818HKZ https://www.encodeproject.org/files/ENCFF818HKZ/@@download/ENCFF818HKZ.bam ENCFF891JKK https://www.encodeproject.org/files/ENCFF891JKK/@@download/ENCFF891JKK.bam 96.6 M 0 94.5 M 0.979 PE 100 100 native 41.3 M 0.0 M 37.7 M 0.780 0.91 0.91 11.29 155 1.05 3.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/063707a9-27cf-4af4-94f1-073982ade350/@@download/cross_correlation_plot/ENCFF172SABENCFF615PQS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB558LXW michael-snyder:L-3457 "ENCFF615PQS,ENCFF172SAB" HiSeq 4000 2017-06-06T18:24:45.203566+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Q000369P28ZF91J6pJ50 ENCSR659SCK https://www.encodeproject.org/experiments/ENCSR659SCK RNA binding protein TOE1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF117NTL https://www.encodeproject.org/files/ENCFF117NTL/@@download/ENCFF117NTL.bam ENCFF916MYP https://www.encodeproject.org/files/ENCFF916MYP/@@download/ENCFF916MYP.bam 88.7 M 0 86.4 M 0.974 PE 100 100 native 37.4 M 0.0 M 30.1 M 0.680 0.81 0.80 4.95 160 1.05 2.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/39099e5d-7a46-4280-9b4f-6463f353165d/@@download/cross_correlation_plot/ENCFF383EPYENCFF321FSV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB714FDI michael-snyder:L-3513 "ENCFF383EPY,ENCFF321FSV" HiSeq 4000 2017-06-23T02:17:56.908721+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560bj00369FYPYg311kYBbB ENCSR659SCK https://www.encodeproject.org/experiments/ENCSR659SCK RNA binding protein TOE1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF310XQA https://www.encodeproject.org/files/ENCFF310XQA/@@download/ENCFF310XQA.bam ENCFF324UAX https://www.encodeproject.org/files/ENCFF324UAX/@@download/ENCFF324UAX.bam 107.5 M 0 103.5 M 0.963 PE 100 100 native 44.9 M 0.0 M 38.7 M 0.721 0.86 0.86 7.10 170 1.05 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c94e3f1-2b64-4d55-b231-52150781b33a/@@download/cross_correlation_plot/ENCFF177ZUVENCFF533WPW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB245UUR michael-snyder:L-3514 "ENCFF533WPW,ENCFF177ZUV" HiSeq 4000 2017-06-23T04:09:07.617795+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560bq803695V91q323G63z9 ENCSR506HXN https://www.encodeproject.org/experiments/ENCSR506HXN transcription factor TRIM22-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF172UCO https://www.encodeproject.org/files/ENCFF172UCO/@@download/ENCFF172UCO.bam ENCFF488IEY https://www.encodeproject.org/files/ENCFF488IEY/@@download/ENCFF488IEY.bam 65.5 M 0 63.1 M 0.964 PE 100 100 native 26.7 M 0.0 M 26.2 M 0.799 0.98 0.98 52.46 215 1.05 5.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/28f45d7d-5391-49bc-af26-53695a644c11/@@download/cross_correlation_plot/ENCFF115KHDENCFF110BCH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB552SSN michael-snyder:L-2187 "ENCFF110BCH,ENCFF115KHD" HiSeq 2000 2016-10-09T17:37:06.212700+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62b80jv1qJ3fJpV1YPf94 ENCSR506HXN https://www.encodeproject.org/experiments/ENCSR506HXN transcription factor TRIM22-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF107HRF https://www.encodeproject.org/files/ENCFF107HRF/@@download/ENCFF107HRF.bam ENCFF541HKM https://www.encodeproject.org/files/ENCFF541HKM/@@download/ENCFF541HKM.bam 70.7 M 0 68.2 M 0.965 PE 100 100 native 29.0 M 0.0 M 28.4 M 0.804 0.98 0.98 52.31 210 1.05 4.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/f29fb85a-dee2-4e91-9bd1-5e216e5e39ae/@@download/cross_correlation_plot/ENCFF521TTLENCFF156BTH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB692JIY michael-snyder:L-2188 "ENCFF156BTH,ENCFF521TTL" HiSeq 2000 2016-10-09T17:39:51.331616+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62g80jv1qJ3fJpV1YPf9J ENCSR000EEF https://www.encodeproject.org/experiments/ENCSR000EEF transcription factor USF2-human HepG2 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF782OFZ https://www.encodeproject.org/files/ENCFF782OFZ/@@download/ENCFF782OFZ.bam ENCFF500IDY https://www.encodeproject.org/files/ENCFF500IDY/@@download/ENCFF500IDY.bam 30.4 M 0 23.3 M 0.765 SE 36 36 native 0.0 M 16.4 M 16.1 M 0.527 0.98 0.98 60.13 115 1.09 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a08ad12-70b0-4afe-8659-aaf59aa8f6d7/@@download/cross_correlation_plot/ENCFF000XZT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJL ENCFF000XZT Illumina Genome Analyzer 2016-12-11T04:38:11.500463+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165kj00369KbxV61z4GFvgg ENCSR000EEF https://www.encodeproject.org/experiments/ENCSR000EEF transcription factor USF2-human HepG2 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF411RHI https://www.encodeproject.org/files/ENCFF411RHI/@@download/ENCFF411RHI.bam ENCFF898OAK https://www.encodeproject.org/files/ENCFF898OAK/@@download/ENCFF898OAK.bam 44.2 M 0 38.8 M 0.880 SE 36 36 native 0.0 M 27.7 M 27.2 M 0.616 0.98 0.99 82.94 115 1.06 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/d14b0a20-3b18-4b51-9946-5b1a601e5a42/@@download/cross_correlation_plot/ENCFF000XZV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMM ENCFF000XZV Illumina Genome Analyzer 2016-12-11T04:48:20.991122+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165kx80369BJyPz9fb9qYJg ENCSR799GOY https://www.encodeproject.org/experiments/ENCSR799GOY "RNA binding protein,transcription factor" YBX1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF973ZYR https://www.encodeproject.org/files/ENCFF973ZYR/@@download/ENCFF973ZYR.bam ENCFF169IAY https://www.encodeproject.org/files/ENCFF169IAY/@@download/ENCFF169IAY.bam 78.7 M 0 73.7 M 0.937 PE 100 100 native 31.1 M 0.0 M 30.3 M 0.769 0.97 0.97 38.70 205 1.05 4.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b643ade-9c03-4cfc-9a23-96f640692bbf/@@download/cross_correlation_plot/ENCFF611YHUENCFF681FMI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB830AOA michael-snyder:L-2195 "ENCFF611YHU,ENCFF681FMI" HiSeq 2000 2016-10-09T17:08:19.135859+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4X8j0jv1XvFGkBjjfjQp6 ENCSR799GOY https://www.encodeproject.org/experiments/ENCSR799GOY "RNA binding protein,transcription factor" YBX1-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF687IOA https://www.encodeproject.org/files/ENCFF687IOA/@@download/ENCFF687IOA.bam ENCFF025KYQ https://www.encodeproject.org/files/ENCFF025KYQ/@@download/ENCFF025KYQ.bam 76.7 M 0 71.2 M 0.928 PE 100 100 native 30.2 M 0.0 M 29.2 M 0.761 0.97 0.97 30.80 200 1.05 3.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/206e9323-63a0-475b-bdb7-015872207a15/@@download/cross_correlation_plot/ENCFF112QGYENCFF659TEJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB724OTH michael-snyder:L-2196 "ENCFF659TEJ,ENCFF112QGY" HiSeq 2000 2016-10-09T17:07:27.249783+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XBQ0jv1xPyfX78Yz4jG7 ENCSR525YFS https://www.encodeproject.org/experiments/ENCSR525YFS transcription factor ZBTB40-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF623YND https://www.encodeproject.org/files/ENCFF623YND/@@download/ENCFF623YND.bam ENCFF186RIK https://www.encodeproject.org/files/ENCFF186RIK/@@download/ENCFF186RIK.bam 74.1 M 0 71.8 M 0.968 PE 100 100 native 30.8 M 0.0 M 29.5 M 0.795 0.96 0.96 23.60 195 1.10 2.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/02182dd3-7458-4067-82a4-bff2dc8ff86d/@@download/cross_correlation_plot/ENCFF802HNQENCFF954DSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB262FQK michael-snyder:L-1900 "ENCFF954DSX,ENCFF802HNQ" HiSeq 2000 2016-10-09T17:34:35.705276+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5xk80jv1v69xp00g4J2V9 ENCSR525YFS https://www.encodeproject.org/experiments/ENCSR525YFS transcription factor ZBTB40-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF247NIG https://www.encodeproject.org/files/ENCFF247NIG/@@download/ENCFF247NIG.bam ENCFF534NHJ https://www.encodeproject.org/files/ENCFF534NHJ/@@download/ENCFF534NHJ.bam 82.5 M 0 80.4 M 0.974 PE 100 100 native 34.7 M 0.0 M 33.8 M 0.819 0.97 0.97 38.09 195 1.07 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c9ae7e3-8439-4bb0-a29e-cd689c3d512a/@@download/cross_correlation_plot/ENCFF827PIQENCFF949SIP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB666OIM michael-snyder:L-1901 "ENCFF827PIQ,ENCFF949SIP" HiSeq 2000 2016-10-09T17:34:34.404291+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5xqQ0jv1b6Q2yZ51Zb5Jv ENCSR157CAU https://www.encodeproject.org/experiments/ENCSR157CAU transcription factor ZKSCAN1-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF883UVV https://www.encodeproject.org/files/ENCFF883UVV/@@download/ENCFF883UVV.bam ENCFF245SLR https://www.encodeproject.org/files/ENCFF245SLR/@@download/ENCFF245SLR.bam 35.2 M 0 34.9 M 0.991 SE 36 36 native 0.0 M 26.8 M 25.9 M 0.736 0.97 0.97 34.38 120 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/070d6928-28ce-4476-844f-f53929344187/@@download/cross_correlation_plot/ENCFF002EEG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB784GTR michael-snyder:ZKSCAN1_HPA006672_HepG2_Rep1 ENCFF002EEG Illumina Genome Analyzer IIx 2016-10-09T17:02:07.838341+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4PJj0jv1XYYX2Fxk3f5PY ENCSR157CAU https://www.encodeproject.org/experiments/ENCSR157CAU transcription factor ZKSCAN1-human HepG2 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF641NQL https://www.encodeproject.org/files/ENCFF641NQL/@@download/ENCFF641NQL.bam ENCFF871SLH https://www.encodeproject.org/files/ENCFF871SLH/@@download/ENCFF871SLH.bam 30.7 M 0 30.4 M 0.991 SE 36 36 native 0.0 M 23.1 M 22.6 M 0.736 0.98 0.98 55.18 100 1.05 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/32941941-8a8c-43c1-a501-0586567c1d17/@@download/cross_correlation_plot/ENCFF002EEH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB385BLP michael-snyder:ZKSCAN1_HPA006672_HepG2_Rep3 ENCFF002EEH Illumina Genome Analyzer IIx 2016-10-09T17:01:54.747938+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4PP80jv1XYYX2Fxk3f5Pv ENCSR101FJT https://www.encodeproject.org/experiments/ENCSR101FJT transcription factor ZNF143-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF680GYM https://www.encodeproject.org/files/ENCFF680GYM/@@download/ENCFF680GYM.bam ENCFF026TDC https://www.encodeproject.org/files/ENCFF026TDC/@@download/ENCFF026TDC.bam 27.7 M 0 27.2 M 0.981 SE 36 36 native 0.0 M 21.2 M 19.7 M 0.710 0.93 0.95 23.87 120 1.26 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e9d4ee7-556f-42c6-9859-aa9df974ab1b/@@download/cross_correlation_plot/ENCFF001YXF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ADE ENCFF001YXF Illumina Genome Analyzer IIx 2016-10-09T17:00:27.613133+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4VBQ0jv1XYYX2Fxk3f5X8 ENCSR101FJT https://www.encodeproject.org/experiments/ENCSR101FJT transcription factor ZNF143-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF113VXD https://www.encodeproject.org/files/ENCFF113VXD/@@download/ENCFF113VXD.bam ENCFF904FVO https://www.encodeproject.org/files/ENCFF904FVO/@@download/ENCFF904FVO.bam 28.3 M 0 27.7 M 0.981 SE 36 36 native 0.0 M 21.0 M 19.2 M 0.678 0.92 0.94 21.14 120 1.33 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/10f1eb39-bc4e-499f-a7cb-597e6c0fa308/@@download/cross_correlation_plot/ENCFF001YXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ADF ENCFF001YXH Illumina Genome Analyzer IIx 2016-10-09T17:00:44.429637+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4VG80jv1f60PxyZ9JGPPY ENCSR683CSF https://www.encodeproject.org/experiments/ENCSR683CSF transcription factor ZNF207-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF447SWP https://www.encodeproject.org/files/ENCFF447SWP/@@download/ENCFF447SWP.bam ENCFF323YRS https://www.encodeproject.org/files/ENCFF323YRS/@@download/ENCFF323YRS.bam 120.5 M 0 115.7 M 0.960 PE 100 100 native 49.1 M 0.0 M 47.6 M 0.791 0.97 0.97 33.91 220 1.04 2.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7a74b15-7dcb-47a7-a190-362205aa7f9a/@@download/cross_correlation_plot/ENCFF888IQKENCFF239IAD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB456KGH michael-snyder:L-1784 "ENCFF888IQK,ENCFF239IAD" HiSeq 4000 2016-09-16T03:25:42.689403+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyX680369Fv9Fbyj2z3PzB ENCSR683CSF https://www.encodeproject.org/experiments/ENCSR683CSF transcription factor ZNF207-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF024FHS https://www.encodeproject.org/files/ENCFF024FHS/@@download/ENCFF024FHS.bam ENCFF053ZIW https://www.encodeproject.org/files/ENCFF053ZIW/@@download/ENCFF053ZIW.bam 70.6 M 0 67.3 M 0.954 PE 100 100 native 28.2 M 0.0 M 27.0 M 0.764 0.96 0.96 23.49 245 1.05 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c0ef2b4-bad6-4956-8c05-aff655f77390/@@download/cross_correlation_plot/ENCFF638EKMENCFF649RQR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB029DNY michael-snyder:L-1785 "ENCFF638EKM,ENCFF649RQR" HiSeq 4000 2016-09-16T03:19:55.488263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyXB00369J6bkz8ZJ7qyB1 ENCSR362NWP https://www.encodeproject.org/experiments/ENCSR362NWP transcription factor ZNF24-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF364EXI https://www.encodeproject.org/files/ENCFF364EXI/@@download/ENCFF364EXI.bam ENCFF620MCO https://www.encodeproject.org/files/ENCFF620MCO/@@download/ENCFF620MCO.bam 92.4 M 0 84.1 M 0.910 PE 100 100 native 36.2 M 0.0 M 33.0 M 0.713 0.91 0.91 10.92 160 1.10 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef357eec-d0c8-48a4-b3c7-f398a21df4e6/@@download/cross_correlation_plot/ENCFF814CIFENCFF860HSN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB755WIT michael-snyder:L-3515 "ENCFF814CIF,ENCFF860HSN" HiSeq 4000 2017-06-23T02:30:11.355897+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560bz0036957fYb30y1fF1z ENCSR362NWP https://www.encodeproject.org/experiments/ENCSR362NWP transcription factor ZNF24-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF195AYY https://www.encodeproject.org/files/ENCFF195AYY/@@download/ENCFF195AYY.bam ENCFF304DHX https://www.encodeproject.org/files/ENCFF304DHX/@@download/ENCFF304DHX.bam 80.2 M 0 72.7 M 0.907 PE 100 100 native 31.0 M 0.0 M 27.2 M 0.679 0.88 0.88 8.00 185 1.10 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa3e9903-711b-4767-afe7-ce93862656e2/@@download/cross_correlation_plot/ENCFF722QHDENCFF196OYG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB570MWZ michael-snyder:L-3516 "ENCFF722QHD,ENCFF196OYG" HiSeq 4000 2017-06-23T01:25:21.684710+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560f2j0369KvK6X31kB2jZq ENCSR101FJU https://www.encodeproject.org/experiments/ENCSR101FJU transcription factor ZNF384-human HepG2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF114WOS https://www.encodeproject.org/files/ENCFF114WOS/@@download/ENCFF114WOS.bam ENCFF015RFH https://www.encodeproject.org/files/ENCFF015RFH/@@download/ENCFF015RFH.bam 28.1 M 0 27.8 M 0.989 SE 36 36 native 0.0 M 21.2 M 20.2 M 0.719 0.95 0.95 21.80 130 1.10 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf00ecd6-e84d-4a5d-95e6-46019bb2febc/@@download/cross_correlation_plot/ENCFF001YXD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ADG ENCFF001YXD Illumina Genome Analyzer IIx 2016-10-09T16:59:41.019752+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45800jv1zBYbxYJ5zzzBP ENCSR101FJU https://www.encodeproject.org/experiments/ENCSR101FJU transcription factor ZNF384-human HepG2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF063NKS https://www.encodeproject.org/files/ENCFF063NKS/@@download/ENCFF063NKS.bam ENCFF601NME https://www.encodeproject.org/files/ENCFF601NME/@@download/ENCFF601NME.bam 30.1 M 0 29.9 M 0.992 SE 36 36 native 0.0 M 22.1 M 20.9 M 0.694 0.95 0.95 21.62 125 1.12 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/40788afc-27fa-4e9e-bbfb-feb6ebfad936/@@download/cross_correlation_plot/ENCFF001YXE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ADH ENCFF001YXE Illumina Genome Analyzer IIx 2016-10-09T16:59:38.691183+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv459Q0jv1XYYX2Fxk3f52k ENCSR957KYB https://www.encodeproject.org/experiments/ENCSR957KYB transcription factor BHLHE40-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF551QAX https://www.encodeproject.org/files/ENCFF551QAX/@@download/ENCFF551QAX.bam ENCFF722VQE https://www.encodeproject.org/files/ENCFF722VQE/@@download/ENCFF722VQE.bam 34.7 M 0 32.1 M 0.924 SE 36 36 native 0.0 M 25.0 M 20.5 M 0.591 0.83 0.83 5.72 110 1.39 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/b54eb7a2-5796-4a8a-b099-f6e58851b1c3/@@download/cross_correlation_plot/ENCFF002EVW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB546TSM michael-snyder:DEC1_NB100-1800_IMR-90_Rep1 ENCFF002EVW Illumina Genome Analyzer IIx 2016-08-30T17:53:21.335039+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ23j03695qVFpfJBXYkGG ENCSR957KYB https://www.encodeproject.org/experiments/ENCSR957KYB transcription factor BHLHE40-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF953OAD https://www.encodeproject.org/files/ENCFF953OAD/@@download/ENCFF953OAD.bam ENCFF198MNU https://www.encodeproject.org/files/ENCFF198MNU/@@download/ENCFF198MNU.bam 28.5 M 0 27.6 M 0.969 SE 36 36 native 0.0 M 21.8 M 18.7 M 0.657 0.86 0.86 6.90 140 1.20 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cbcba93-2b0c-4e7a-b5f2-1336f9071365/@@download/cross_correlation_plot/ENCFF002EVS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB964RDZ michael-snyder:DEC1_NB100-1800_IMR-90_Rep2 ENCFF002EVS Illumina Genome Analyzer IIx 2016-08-30T17:52:45.951713+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2680369P2yGzP5BYGyqV ENCSR000EFM https://www.encodeproject.org/experiments/ENCSR000EFM transcription factor CEBPB-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF643KYI https://www.encodeproject.org/files/ENCFF643KYI/@@download/ENCFF643KYI.bam ENCFF359YHS https://www.encodeproject.org/files/ENCFF359YHS/@@download/ENCFF359YHS.bam 28.4 M 0 27.9 M 0.982 SE 36 36 native 0.0 M 22.1 M 20.2 M 0.710 0.92 0.94 19.55 115 2.14 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4eb70db-7c98-46d6-801f-f5ba6d51b7ba/@@download/cross_correlation_plot/ENCFF000YBL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJF ENCFF000YBL Illumina Genome Analyzer 2016-12-10T22:45:40.836132+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Gq0036969X0jJ6p3ffbX ENCSR000EFM https://www.encodeproject.org/experiments/ENCSR000EFM transcription factor CEBPB-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF255AHN https://www.encodeproject.org/files/ENCFF255AHN/@@download/ENCFF255AHN.bam ENCFF056XVT https://www.encodeproject.org/files/ENCFF056XVT/@@download/ENCFF056XVT.bam 17.1 M 0 16.6 M 0.966 SE 36 36 native 0.0 M 13.0 M 12.3 M 0.715 0.95 0.95 25.35 120 2.30 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/2adea7c1-f750-42c7-8ef9-2716834b1c87/@@download/cross_correlation_plot/ENCFF000YBO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJE ENCFF000YBO Illumina Genome Analyzer 2016-12-10T21:52:09.606810+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Gzj036969X0jJ6p3ffbq ENCSR000EFC https://www.encodeproject.org/experiments/ENCSR000EFC "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF537IEQ https://www.encodeproject.org/files/ENCFF537IEQ/@@download/ENCFF537IEQ.bam ENCFF424IYB https://www.encodeproject.org/files/ENCFF424IYB/@@download/ENCFF424IYB.bam 29.0 M 0 28.3 M 0.975 SE 36 36 native 0.0 M 21.9 M 20.0 M 0.689 0.92 0.91 11.33 110 1.05 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/339f658b-23fd-4007-9d0e-7f6d6b1ef06f/@@download/cross_correlation_plot/ENCFF000YBU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFW ENCFF000YBU Illumina Genome Analyzer 2016-12-11T04:25:37.674848+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165PKQ03697k5jKB6pJ7qzg ENCSR000EFC https://www.encodeproject.org/experiments/ENCSR000EFC "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF069JVY https://www.encodeproject.org/files/ENCFF069JVY/@@download/ENCFF069JVY.bam ENCFF140BYS https://www.encodeproject.org/files/ENCFF140BYS/@@download/ENCFF140BYS.bam 22.3 M 0 21.5 M 0.965 SE 36 36 native 0.0 M 16.3 M 15.2 M 0.683 0.94 0.94 15.45 100 1.06 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7edf7df-93c4-4265-97d1-90a45089e166/@@download/cross_correlation_plot/ENCFF000YBW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARN ENCFF000YBW Illumina Genome Analyzer 2016-12-11T04:21:17.409640+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165PZ003697yz601ypVJ3bp ENCSR970FKL https://www.encodeproject.org/experiments/ENCSR970FKL control Control-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF195PNZ https://www.encodeproject.org/files/ENCFF195PNZ/@@download/ENCFF195PNZ.bam ENCFF352RKQ https://www.encodeproject.org/files/ENCFF352RKQ/@@download/ENCFF352RKQ.bam 42.4 M 0 41.6 M 0.982 SE 36 36 native 0.0 M 32.7 M 31.5 M 0.744 0.97 0.97 33.42 110 1.01 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/405a5b5b-9372-4cd6-a098-f94d8ca846d6/@@download/cross_correlation_plot/ENCFF584LXI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB262FRG michael-snyder:L-1670 ENCFF584LXI Illumina Genome Analyzer IIx 2016-08-30T17:55:36.626945+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ18803695qVFpfJBXYkFF ENCSR970FKL https://www.encodeproject.org/experiments/ENCSR970FKL control Control-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF928IDQ https://www.encodeproject.org/files/ENCFF928IDQ/@@download/ENCFF928IDQ.bam ENCFF433SPB https://www.encodeproject.org/files/ENCFF433SPB/@@download/ENCFF433SPB.bam 42.0 M 0 41.0 M 0.977 SE 36 36 native 0.0 M 32.4 M 31.5 M 0.752 0.98 0.98 51.72 85 1.01 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd6e93c1-ee6c-420e-99d5-8b7c6eef7de6/@@download/cross_correlation_plot/ENCFF492DKQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB451LZP michael-snyder:L-1671 ENCFF492DKQ Illumina Genome Analyzer IIx 2016-08-30T17:55:29.085751+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ1Bj0369F710GX9Bgbg0Y ENCSR000EFI https://www.encodeproject.org/experiments/ENCSR000EFI "transcription factor,RNA binding protein" CTCF-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF010FWV https://www.encodeproject.org/files/ENCFF010FWV/@@download/ENCFF010FWV.bam ENCFF356VNC https://www.encodeproject.org/files/ENCFF356VNC/@@download/ENCFF356VNC.bam 25.7 M 0 23.6 M 0.921 SE 36 36 native 0.0 M 18.9 M 16.6 M 0.646 0.88 0.89 9.39 130 2.10 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/060591ee-082d-445b-b088-256137bf3866/@@download/cross_correlation_plot/ENCFF000YCK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFD ENCFF000YCK Illumina Genome Analyzer 2016-12-11T04:41:23.590261+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165xpQ0369KbxV61z4GFvk5 ENCSR000EFI https://www.encodeproject.org/experiments/ENCSR000EFI "transcription factor,RNA binding protein" CTCF-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF431WUY https://www.encodeproject.org/files/ENCFF431WUY/@@download/ENCFF431WUY.bam ENCFF505JVH https://www.encodeproject.org/files/ENCFF505JVH/@@download/ENCFF505JVH.bam 24.1 M 0 23.0 M 0.955 SE 36 36 native 0.0 M 18.5 M 15.4 M 0.638 0.84 0.87 9.54 120 3.61 2.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c81a32d0-a890-4e73-864d-7ceccb6c49d6/@@download/cross_correlation_plot/ENCFF000YCM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFC ENCFF000YCM Illumina Genome Analyzer 2016-12-11T04:41:18.634199+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165xzQ0369GF0YB1zjPf738 ENCSR664OKA https://www.encodeproject.org/experiments/ENCSR664OKA transcription factor ELK1-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF870JSA https://www.encodeproject.org/files/ENCFF870JSA/@@download/ENCFF870JSA.bam ENCFF391YGA https://www.encodeproject.org/files/ENCFF391YGA/@@download/ENCFF391YGA.bam 26.2 M 0 24.0 M 0.915 SE 36 36 native 0.0 M 18.7 M 10.8 M 0.414 0.58 0.53 1.81 130 1.14 7.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/1781329b-cb21-4fa4-89b5-8a00ffe3ad93/@@download/cross_correlation_plot/ENCFF002EVU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB681IZD michael-snyder:ELK1_1277-1_IMR-90_Rep1 ENCFF002EVU Illumina Genome Analyzer IIx 2016-08-30T17:52:26.179096+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2PQ0369Kbz03YVBXFzyp ENCSR664OKA https://www.encodeproject.org/experiments/ENCSR664OKA transcription factor ELK1-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF898FWJ https://www.encodeproject.org/files/ENCFF898FWJ/@@download/ENCFF898FWJ.bam ENCFF085JGZ https://www.encodeproject.org/files/ENCFF085JGZ/@@download/ENCFF085JGZ.bam 31.2 M 0 29.2 M 0.936 SE 36 36 native 0.0 M 21.7 M 19.4 M 0.623 0.90 0.90 9.35 100 1.04 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/58bc3ef6-7d55-45c3-a23f-bcbe0b376c8b/@@download/cross_correlation_plot/ENCFF002EVT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB146KMA michael-snyder:ELK1_1277-1_IMR-90_Rep2 ENCFF002EVT Illumina Genome Analyzer IIx 2016-08-30T17:52:22.602802+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2X00369BQ7VQPxBqP1Pf ENCSR124AIG https://www.encodeproject.org/experiments/ENCSR124AIG transcription factor FOS-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF026TRP https://www.encodeproject.org/files/ENCFF026TRP/@@download/ENCFF026TRP.bam ENCFF635KHI https://www.encodeproject.org/files/ENCFF635KHI/@@download/ENCFF635KHI.bam 22.3 M 0 21.0 M 0.938 SE 36 36 native 0.0 M 16.2 M 15.6 M 0.699 0.96 0.96 25.49 130 1.15 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd7f1318-ab77-4961-976a-55c10c078d6d/@@download/cross_correlation_plot/ENCFF002EVM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB063BCL michael-snyder:c-Fos_sc-7202_IMR-90_Rep1 ENCFF002EVM Illumina Genome Analyzer IIx 2016-08-30T17:48:16.256185+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3Vj0369B78V6F5GJ9p2k ENCSR124AIG https://www.encodeproject.org/experiments/ENCSR124AIG transcription factor FOS-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF039IQB https://www.encodeproject.org/files/ENCFF039IQB/@@download/ENCFF039IQB.bam ENCFF258LUK https://www.encodeproject.org/files/ENCFF258LUK/@@download/ENCFF258LUK.bam 24.1 M 0 23.0 M 0.956 SE 36 36 native 0.0 M 18.1 M 16.9 M 0.703 0.94 0.94 15.90 135 1.29 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d962149d-7d31-435d-aad3-654cc0359b37/@@download/cross_correlation_plot/ENCFF002EVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB185HFY michael-snyder:c-Fos_sc-7202_IMR-90_Rep2 ENCFF002EVP Illumina Genome Analyzer IIx 2016-08-30T17:48:26.278563+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3Z8036954zK8K9G2jZfg ENCSR000EFH https://www.encodeproject.org/experiments/ENCSR000EFH transcription factor MAFK-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF748XLG https://www.encodeproject.org/files/ENCFF748XLG/@@download/ENCFF748XLG.bam ENCFF299POX https://www.encodeproject.org/files/ENCFF299POX/@@download/ENCFF299POX.bam 28.2 M 0 27.4 M 0.973 SE 36 36 native 0.0 M 21.9 M 20.2 M 0.717 0.92 0.94 19.09 125 1.56 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bc1061a-bed9-48fa-a1f3-4165e6f7e663/@@download/cross_correlation_plot/ENCFF000YCY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABV ENCFF000YCY Illumina Genome Analyzer 2016-10-09T16:54:37.033698+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J880jv1g5yGjfvVx0P7v ENCSR000EFH https://www.encodeproject.org/experiments/ENCSR000EFH transcription factor MAFK-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF044ZFD https://www.encodeproject.org/files/ENCFF044ZFD/@@download/ENCFF044ZFD.bam ENCFF180NNK https://www.encodeproject.org/files/ENCFF180NNK/@@download/ENCFF180NNK.bam 26.8 M 0 25.5 M 0.949 SE 36 36 native 0.0 M 20.2 M 18.6 M 0.695 0.92 0.93 16.16 135 1.48 2.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/067a249e-f913-4510-b4f4-0507a53d679f/@@download/cross_correlation_plot/ENCFF000YDA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABU ENCFF000YDA Illumina Genome Analyzer 2016-10-09T16:54:00.555809+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4J9j0jv1QxJBfj5Zb2pzp ENCSR000EFF https://www.encodeproject.org/experiments/ENCSR000EFF "RNA binding protein,transcription factor" MAZ-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF812FMM https://www.encodeproject.org/files/ENCFF812FMM/@@download/ENCFF812FMM.bam ENCFF867KQD https://www.encodeproject.org/files/ENCFF867KQD/@@download/ENCFF867KQD.bam 31.7 M 0 29.3 M 0.925 SE 36 36 native 0.0 M 23.2 M 15.1 M 0.476 0.65 0.62 2.33 120 1.13 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/78cba6ac-c824-40a6-be4b-0fedb7ed9730/@@download/cross_correlation_plot/ENCFF000YDG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABH ENCFF000YDG Illumina Genome Analyzer 2016-12-11T04:29:58.466740+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165V6j0369BJyPz9fb9qYFb ENCSR000EFF https://www.encodeproject.org/experiments/ENCSR000EFF "RNA binding protein,transcription factor" MAZ-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF035PHI https://www.encodeproject.org/files/ENCFF035PHI/@@download/ENCFF035PHI.bam ENCFF565LCU https://www.encodeproject.org/files/ENCFF565LCU/@@download/ENCFF565LCU.bam 28.7 M 0 26.7 M 0.927 SE 36 36 native 0.0 M 20.6 M 19.0 M 0.662 0.92 0.93 13.64 90 1.40 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1ac641e-9cff-4d71-9a0f-18677710c0d6/@@download/cross_correlation_plot/ENCFF000YDI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHH ENCFF000YDI Illumina Genome Analyzer 2016-12-11T04:27:57.030581+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165VFQ036969X0jJ6p3ffxQ ENCSR000EFE https://www.encodeproject.org/experiments/ENCSR000EFE transcription factor MXI1-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF793JKZ https://www.encodeproject.org/files/ENCFF793JKZ/@@download/ENCFF793JKZ.bam ENCFF194VKK https://www.encodeproject.org/files/ENCFF194VKK/@@download/ENCFF194VKK.bam 26.8 M 0 23.1 M 0.863 SE 36 36 native 0.0 M 18.4 M 10.9 M 0.409 0.60 0.56 1.96 120 1.22 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/05a6bb21-e79a-4e3d-aabb-14926769af7e/@@download/cross_correlation_plot/ENCFF000YDP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOI ENCFF000YDP Illumina Genome Analyzer 2016-12-10T21:50:36.446328+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163B7Q0369K8k6p8qBf9q1J ENCSR000EFE https://www.encodeproject.org/experiments/ENCSR000EFE transcription factor MXI1-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF552LJD https://www.encodeproject.org/files/ENCFF552LJD/@@download/ENCFF552LJD.bam ENCFF298XTJ https://www.encodeproject.org/files/ENCFF298XTJ/@@download/ENCFF298XTJ.bam 31.1 M 0 28.5 M 0.917 SE 36 36 native 0.0 M 21.8 M 19.3 M 0.619 0.88 0.88 8.17 110 1.19 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/a37ea058-d60a-40e8-8abe-6480289cdea2/@@download/cross_correlation_plot/ENCFF000YDR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOJ ENCFF000YDR Illumina Genome Analyzer 2016-12-10T22:47:12.628019+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163BG803699Z3Y8493qbppY ENCSR197WGI https://www.encodeproject.org/experiments/ENCSR197WGI transcription factor NFE2L2-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF461GBT https://www.encodeproject.org/files/ENCFF461GBT/@@download/ENCFF461GBT.bam ENCFF071JVO https://www.encodeproject.org/files/ENCFF071JVO/@@download/ENCFF071JVO.bam 30.1 M 0 28.2 M 0.937 SE 36 36 native 0.0 M 21.2 M 19.1 M 0.634 0.90 0.91 10.99 110 1.29 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1ee33c6-53bf-4c02-8dc0-3cfc7a5fa026/@@download/cross_correlation_plot/ENCFF002EWC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB802DMN michael-snyder:Nrf2_sc-13032_IMR-90_Rep2 ENCFF002EWC Illumina Genome Analyzer IIx 2016-08-30T17:52:23.691964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2b803695Q6VfV1Bpzxbg ENCSR197WGI https://www.encodeproject.org/experiments/ENCSR197WGI transcription factor NFE2L2-human IMR-90 primary cell 3 michael-snyder ENCODE3 GRCh38 ENCFF467POD https://www.encodeproject.org/files/ENCFF467POD/@@download/ENCFF467POD.bam ENCFF851GPH https://www.encodeproject.org/files/ENCFF851GPH/@@download/ENCFF851GPH.bam 23.9 M 0 20.6 M 0.861 SE 36 36 native 0.0 M 15.8 M 12.7 M 0.531 0.81 0.81 4.95 130 1.27 2.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/95485a06-4f90-441d-86fc-7309ab0baa38/@@download/cross_correlation_plot/ENCFF002EWD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB427MQL michael-snyder:Nrf2_sc-13032_IMR-90_Rep3 ENCFF002EWD Illumina Genome Analyzer IIx 2016-08-30T17:51:47.762138+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ2gj0369F710GX9Bgbg1k ENCSR000EFK https://www.encodeproject.org/experiments/ENCSR000EFK transcription factor POLR2A-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF515OCQ https://www.encodeproject.org/files/ENCFF515OCQ/@@download/ENCFF515OCQ.bam ENCFF401PIA https://www.encodeproject.org/files/ENCFF401PIA/@@download/ENCFF401PIA.bam 29.6 M 0 27.8 M 0.938 SE 36 36 native 0.0 M 22.2 M 19.7 M 0.664 0.89 0.91 11.34 110 1.44 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b6bc438-6b63-460b-bf26-3d79cd3bb4f7/@@download/cross_correlation_plot/ENCFF000YDX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADB ENCFF000YDX Illumina Genome Analyzer 2016-12-11T04:51:31.973174+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16637Q0369BV55708G9qbYy ENCSR000EFK https://www.encodeproject.org/experiments/ENCSR000EFK transcription factor POLR2A-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF706CBM https://www.encodeproject.org/files/ENCFF706CBM/@@download/ENCFF706CBM.bam ENCFF428GRJ https://www.encodeproject.org/files/ENCFF428GRJ/@@download/ENCFF428GRJ.bam 28.5 M 0 26.7 M 0.936 SE 36 36 native 0.0 M 21.0 M 18.5 M 0.649 0.88 0.88 8.72 130 1.25 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/4cba428f-162f-4ca1-a407-64691e49f1e1/@@download/cross_correlation_plot/ENCFF000YDZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASL ENCFF000YDZ Illumina Genome Analyzer 2016-12-11T04:51:48.552816+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1663J00369KbxV61z4GFvpk ENCSR000EFL https://www.encodeproject.org/experiments/ENCSR000EFL control rabbit-IgG-control-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF823WOO https://www.encodeproject.org/files/ENCFF823WOO/@@download/ENCFF823WOO.bam ENCFF756TTQ https://www.encodeproject.org/files/ENCFF756TTQ/@@download/ENCFF756TTQ.bam 35.0 M 0 33.4 M 0.954 SE 36 36 native 0.0 M 25.8 M 22.6 M 0.647 0.88 0.88 8.01 120 1.03 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ba9b9df-a0e3-48f8-91e0-d18571474be1/@@download/cross_correlation_plot/ENCFF000YCQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKI ENCFF000YCQ Illumina Genome Analyzer 2016-10-09T17:00:05.372685+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4B000jv1f60PxyZ9JGP9j ENCSR000EFL https://www.encodeproject.org/experiments/ENCSR000EFL control rabbit-IgG-control-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF494UKO https://www.encodeproject.org/files/ENCFF494UKO/@@download/ENCFF494UKO.bam ENCFF646OIA https://www.encodeproject.org/files/ENCFF646OIA/@@download/ENCFF646OIA.bam 31.4 M 0 27.4 M 0.874 SE 36 36 native 0.0 M 20.9 M 18.4 M 0.587 0.88 0.88 8.04 115 1.03 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/d5cd027d-82b3-4a1d-a1dc-b1daea2abf69/@@download/cross_correlation_plot/ENCFF000YCS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB673AYQ ENCFF000YCS Illumina Genome Analyzer 2016-10-09T16:59:38.404824+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4B180jv1XYYX2Fxk3f58p ENCSR000EFJ https://www.encodeproject.org/experiments/ENCSR000EFJ transcription factor RAD21-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF753ECA https://www.encodeproject.org/files/ENCFF753ECA/@@download/ENCFF753ECA.bam ENCFF638RTQ https://www.encodeproject.org/files/ENCFF638RTQ/@@download/ENCFF638RTQ.bam 27.6 M 0 26.5 M 0.961 SE 36 36 native 0.0 M 21.6 M 19.6 M 0.709 0.91 0.93 16.15 110 2.12 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/b88b181e-d0cd-472a-8cbf-a4f7b45ba68b/@@download/cross_correlation_plot/ENCFF000YEE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIU ENCFF000YEE Illumina Genome Analyzer 2016-12-10T23:45:57.194981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Kx803699Z3Y8493qbpqZ ENCSR000EFJ https://www.encodeproject.org/experiments/ENCSR000EFJ transcription factor RAD21-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF238XQT https://www.encodeproject.org/files/ENCFF238XQT/@@download/ENCFF238XQT.bam ENCFF271HSG https://www.encodeproject.org/files/ENCFF271HSG/@@download/ENCFF271HSG.bam 32.0 M 0 29.9 M 0.932 SE 36 36 native 0.0 M 23.6 M 21.6 M 0.673 0.91 0.92 13.20 120 1.60 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/210c82e6-7357-42ef-8920-eee3abf42372/@@download/cross_correlation_plot/ENCFF000YEG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIV ENCFF000YEG Illumina Genome Analyzer 2016-12-11T00:13:02.606948+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163P280369Bxb30J6x5bZ6b ENCSR000EFG https://www.encodeproject.org/experiments/ENCSR000EFG transcription factor RCOR1-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF939NEW https://www.encodeproject.org/files/ENCFF939NEW/@@download/ENCFF939NEW.bam ENCFF178QNC https://www.encodeproject.org/files/ENCFF178QNC/@@download/ENCFF178QNC.bam 31.0 M 0 29.7 M 0.959 SE 36 36 native 0.0 M 23.2 M 19.1 M 0.615 0.82 0.81 5.10 125 1.12 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb09b49b-6d98-45a4-ad48-6f40ce746cec/@@download/cross_correlation_plot/ENCFF000YCB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUL ENCFF000YCB Illumina Genome Analyzer 2016-12-11T02:48:20.659714+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164038036933PVVJ7Qq01V2 ENCSR000EFG https://www.encodeproject.org/experiments/ENCSR000EFG transcription factor RCOR1-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF397HYT https://www.encodeproject.org/files/ENCFF397HYT/@@download/ENCFF397HYT.bam ENCFF204IAC https://www.encodeproject.org/files/ENCFF204IAC/@@download/ENCFF204IAC.bam 31.3 M 0 29.4 M 0.938 SE 36 36 native 0.0 M 22.0 M 19.7 M 0.630 0.90 0.89 9.24 110 1.05 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/71cca08f-60dc-45d9-9637-27864ae7fd19/@@download/cross_correlation_plot/ENCFF000YCD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMN ENCFF000YCD Illumina Genome Analyzer 2016-12-11T02:53:43.213928+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1640800369445BJJ915X9jb ENCSR000EFD https://www.encodeproject.org/experiments/ENCSR000EFD transcription factor RFX5-human IMR-90 primary cell 1 michael-snyder ENCODE2 GRCh38 ENCFF820NUO https://www.encodeproject.org/files/ENCFF820NUO/@@download/ENCFF820NUO.bam ENCFF541IOW https://www.encodeproject.org/files/ENCFF541IOW/@@download/ENCFF541IOW.bam 29.9 M 0 26.7 M 0.895 SE 36 36 native 0.0 M 21.1 M 15.1 M 0.505 0.71 0.70 3.05 130 1.18 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ef0fd54-1cfd-430a-92b3-035c8de60c49/@@download/cross_correlation_plot/ENCFF000YEM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOE ENCFF000YEM Illumina Genome Analyzer 2016-12-10T22:23:54.511271+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163BX00369Bxb30J6x5bZ5Q ENCSR000EFD https://www.encodeproject.org/experiments/ENCSR000EFD transcription factor RFX5-human IMR-90 primary cell 2 michael-snyder ENCODE2 GRCh38 ENCFF821WPZ https://www.encodeproject.org/files/ENCFF821WPZ/@@download/ENCFF821WPZ.bam ENCFF987JAU https://www.encodeproject.org/files/ENCFF987JAU/@@download/ENCFF987JAU.bam 31.3 M 0 29.2 M 0.936 SE 36 36 native 0.0 M 22.0 M 20.0 M 0.639 0.91 0.91 11.33 105 1.08 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/852616bd-9785-4bf3-b51f-96bb7e12ee71/@@download/cross_correlation_plot/ENCFF000YEO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AET ENCFF000YEO Illumina Genome Analyzer 2016-12-10T22:23:45.453971+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Bfj03692f1gp513PxgGp ENCSR000HPG https://www.encodeproject.org/experiments/ENCSR000HPG transcription factor SMC3-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF195AOS https://www.encodeproject.org/files/ENCFF195AOS/@@download/ENCFF195AOS.bam ENCFF013WBK https://www.encodeproject.org/files/ENCFF013WBK/@@download/ENCFF013WBK.bam 28.1 M 0 27.1 M 0.966 SE 36 36 native 0.0 M 22.2 M 16.8 M 0.598 0.76 0.75 3.75 125 1.73 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/da1e6507-202d-440e-be50-1e99695589ef/@@download/cross_correlation_plot/ENCFF002EVY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB631ERN michael-snyder:SMC3_ab9263_IMR-90_Rep1 ENCFF002EVY Illumina Genome Analyzer IIx 2016-08-30T17:51:38.903497+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ33Q0369F710GX9Bgbg2F ENCSR000HPG https://www.encodeproject.org/experiments/ENCSR000HPG transcription factor SMC3-human IMR-90 primary cell 3 michael-snyder ENCODE3 GRCh38 ENCFF657UEE https://www.encodeproject.org/files/ENCFF657UEE/@@download/ENCFF657UEE.bam ENCFF616BAZ https://www.encodeproject.org/files/ENCFF616BAZ/@@download/ENCFF616BAZ.bam 23.4 M 0 20.7 M 0.882 SE 36 36 native 0.0 M 16.2 M 13.1 M 0.559 0.81 0.81 4.94 120 1.41 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/149ad28f-2d05-4089-9c69-08ad49207122/@@download/cross_correlation_plot/ENCFF002EWB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB850EBA michael-snyder:SMC3_ab9263_IMR-90_Rep3 ENCFF002EWB Illumina Genome Analyzer IIx 2016-08-30T17:48:14.749953+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3680369B5j9GPVGJ0Xy9 ENCSR513UQG https://www.encodeproject.org/experiments/ENCSR513UQG transcription factor USF2-human IMR-90 primary cell 1 michael-snyder ENCODE3 GRCh38 ENCFF144SKI https://www.encodeproject.org/files/ENCFF144SKI/@@download/ENCFF144SKI.bam ENCFF015QPY https://www.encodeproject.org/files/ENCFF015QPY/@@download/ENCFF015QPY.bam 32.1 M 0 29.2 M 0.910 SE 36 36 native 0.0 M 22.6 M 18.2 M 0.568 0.81 0.83 5.83 110 1.48 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/581056a9-bc04-4194-ab75-acf55bd9f524/@@download/cross_correlation_plot/ENCFF002EWI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB928PDD michael-snyder:USF2_ab60931_IMR-90_Rep1 ENCFF002EWI Illumina Genome Analyzer IIx 2016-08-30T17:48:33.512938+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3980369B5j9GPVGJ0XyX ENCSR513UQG https://www.encodeproject.org/experiments/ENCSR513UQG transcription factor USF2-human IMR-90 primary cell 2 michael-snyder ENCODE3 GRCh38 ENCFF128DIV https://www.encodeproject.org/files/ENCFF128DIV/@@download/ENCFF128DIV.bam ENCFF280FDN https://www.encodeproject.org/files/ENCFF280FDN/@@download/ENCFF280FDN.bam 29.0 M 0 28.2 M 0.972 SE 36 36 native 0.0 M 21.8 M 20.3 M 0.699 0.93 0.94 16.32 135 1.16 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/fdb71cd1-ba51-4f07-9b00-b40c94c6f786/@@download/cross_correlation_plot/ENCFF002EWA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB563AHW michael-snyder:USF2_ab60931_IMR-90_Rep2 ENCFF002EWA Illumina Genome Analyzer IIx 2016-08-30T17:48:42.514709+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3Fj03699Jb13XVGFx8vX ENCSR822CCM https://www.encodeproject.org/experiments/ENCSR822CCM transcription factor ARID1B-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF225IQS https://www.encodeproject.org/files/ENCFF225IQS/@@download/ENCFF225IQS.bam ENCFF059JBH https://www.encodeproject.org/files/ENCFF059JBH/@@download/ENCFF059JBH.bam 129.4 M 0 112.3 M 0.868 PE 100 100 native 48.5 M 0.0 M 44.8 M 0.692 0.92 0.92 13.07 200 1.57 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ad2148e-2064-45d0-9013-6983fd89e6e5/@@download/cross_correlation_plot/ENCFF680HKSENCFF065YSO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB485DXZ michael-snyder:L-2240 "ENCFF680HKS,ENCFF065YSO" HiSeq 4000 2016-10-27T22:17:15.825415+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bxxQ03697KPkyX9BPQF6b ENCSR822CCM https://www.encodeproject.org/experiments/ENCSR822CCM transcription factor ARID1B-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF431WVX https://www.encodeproject.org/files/ENCFF431WVX/@@download/ENCFF431WVX.bam ENCFF058QVM https://www.encodeproject.org/files/ENCFF058QVM/@@download/ENCFF058QVM.bam 184.6 M 0 179.7 M 0.973 PE 100 100 native 78.6 M 0.0 M 70.7 M 0.766 0.90 0.90 9.88 195 1.30 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/90b854b5-f9b0-4f1f-8b4f-55f56e880a86/@@download/cross_correlation_plot/ENCFF718FBAENCFF521KBW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB034SHO michael-snyder:L-2287 "ENCFF718FBA,ENCFF521KBW" HiSeq 4000 2016-10-27T22:25:36.353848+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08by2803694q32PPxBJ6b31 ENCSR000EFY https://www.encodeproject.org/experiments/ENCSR000EFY transcription factor ARID3A-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF495MEU https://www.encodeproject.org/files/ENCFF495MEU/@@download/ENCFF495MEU.bam ENCFF892CZA https://www.encodeproject.org/files/ENCFF892CZA/@@download/ENCFF892CZA.bam 28.3 M 0 27.4 M 0.967 SE 36 36 native 0.0 M 21.4 M 19.8 M 0.702 0.93 0.93 14.06 120 1.06 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/98cd1e3b-3bdf-4ab9-8773-03e8a7b8e6d0/@@download/cross_correlation_plot/ENCFF000YEU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUQ ENCFF000YEU Illumina Genome Analyzer 2016-12-11T03:00:48.754779+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1644b80369PvYp91zK1Px8j ENCSR000EFY https://www.encodeproject.org/experiments/ENCSR000EFY transcription factor ARID3A-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF477DKP https://www.encodeproject.org/files/ENCFF477DKP/@@download/ENCFF477DKP.bam ENCFF416CQL https://www.encodeproject.org/files/ENCFF416CQL/@@download/ENCFF416CQL.bam 15.0 M 0 13.8 M 0.919 SE 36 36 native 0.0 M 10.8 M 10.0 M 0.665 0.93 0.93 13.58 120 1.07 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/128062b8-6a58-4979-b246-ad16ed33b5d0/@@download/cross_correlation_plot/ENCFF000YEW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUP ENCFF000YEW Illumina Genome Analyzer 2016-12-11T02:42:47.629036+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1644p003696z7JqGk4Yzy6q ENCSR155KHM https://www.encodeproject.org/experiments/ENCSR155KHM transcription factor ARNT-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF108SDD https://www.encodeproject.org/files/ENCFF108SDD/@@download/ENCFF108SDD.bam ENCFF686XTG https://www.encodeproject.org/files/ENCFF686XTG/@@download/ENCFF686XTG.bam 71.8 M 0 70.7 M 0.984 PE 100 100 native 31.2 M 0.0 M 27.6 M 0.769 0.89 0.89 8.55 220 1.06 3.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/21e3cc65-044f-466c-b99a-8c51ffde279c/@@download/cross_correlation_plot/ENCFF109UIVENCFF748SHJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB465TLL michael-snyder:L-2061 "ENCFF748SHJ,ENCFF109UIV" HiSeq 2000 2016-10-09T17:04:44.955414+00:00 released processing https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44980jv1xPyfX78Yz4j0X ENCSR155KHM https://www.encodeproject.org/experiments/ENCSR155KHM transcription factor ARNT-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF928JGK https://www.encodeproject.org/files/ENCFF928JGK/@@download/ENCFF928JGK.bam ENCFF636HGA https://www.encodeproject.org/files/ENCFF636HGA/@@download/ENCFF636HGA.bam 62.0 M 0 61.0 M 0.985 PE 100 100 native 27.1 M 0.0 M 22.5 M 0.727 0.83 0.83 5.69 225 1.07 3.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/7979f189-255a-4823-80a8-f051452f258a/@@download/cross_correlation_plot/ENCFF126ENCENCFF198XWC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB945YAD michael-snyder:L-2062 "ENCFF198XWC,ENCFF126ENC" HiSeq 2000 2016-10-09T17:03:54.941858+00:00 released processing https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44Bj0jv1XYYX2Fxk3f51z ENCSR613NUC https://www.encodeproject.org/experiments/ENCSR613NUC transcription factor ARNT-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF490XTX https://www.encodeproject.org/files/ENCFF490XTX/@@download/ENCFF490XTX.bam ENCFF990IZY https://www.encodeproject.org/files/ENCFF990IZY/@@download/ENCFF990IZY.bam 78.7 M 0 77.3 M 0.982 PE 100 100 native 33.7 M 0.0 M 30.6 M 0.777 0.91 0.91 11.24 220 1.08 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/060794df-0545-4ea9-a1c9-1e8e98528c2d/@@download/cross_correlation_plot/ENCFF546YEQENCFF446XHP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB369GSL michael-snyder:L-209 "ENCFF546YEQ,ENCFF446XHP" HiSeq 2000 2016-10-09T17:31:28.135995+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64980jv1QZp37BGvK2BKZ ENCSR613NUC https://www.encodeproject.org/experiments/ENCSR613NUC transcription factor ARNT-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF258DFY https://www.encodeproject.org/files/ENCFF258DFY/@@download/ENCFF258DFY.bam ENCFF986DNW https://www.encodeproject.org/files/ENCFF986DNW/@@download/ENCFF986DNW.bam 59.7 M 0 58.7 M 0.984 PE 100 100 native 25.8 M 0.0 M 23.3 M 0.779 0.91 0.91 10.57 215 1.10 3.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/592ffcf3-2b3d-4405-a9ed-3f468dce47ec/@@download/cross_correlation_plot/ENCFF841ZHVENCFF382GYA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB295YUB michael-snyder:L-213 "ENCFF841ZHV,ENCFF382GYA" HiSeq 2000 2016-10-09T17:31:22.606024+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64FQ0jv1z5Z5kK1VpQJKQ ENCSR869IUD https://www.encodeproject.org/experiments/ENCSR869IUD transcription factor ATF2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF883MZR https://www.encodeproject.org/files/ENCFF883MZR/@@download/ENCFF883MZR.bam ENCFF123YZF https://www.encodeproject.org/files/ENCFF123YZF/@@download/ENCFF123YZF.bam 41.5 M 0 40.0 M 0.963 PE 100 100 native 16.8 M 0.0 M 14.4 M 0.696 0.87 0.87 7.33 215 1.43 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/17a847e1-db43-4b78-8621-a69a84ae01f3/@@download/cross_correlation_plot/ENCFF307XRLENCFF951ZXP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB336JCV michael-snyder:L-159 "ENCFF307XRL,ENCFF951ZXP" HiSeq 2000 2017-01-26T00:23:35.248477+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9q80369424qKP3Yf7xbf ENCSR869IUD https://www.encodeproject.org/experiments/ENCSR869IUD transcription factor ATF2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF719FYJ https://www.encodeproject.org/files/ENCFF719FYJ/@@download/ENCFF719FYJ.bam ENCFF718IGX https://www.encodeproject.org/files/ENCFF718IGX/@@download/ENCFF718IGX.bam 55.0 M 0 54.0 M 0.982 PE 100 100 native 23.8 M 0.0 M 20.5 M 0.747 0.89 0.89 9.22 195 1.81 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/0bc082df-835c-4489-8f39-610e9c156ff1/@@download/cross_correlation_plot/ENCFF043SEFENCFF780EID.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB389JVD michael-snyder:L-176 "ENCFF043SEF,ENCFF780EID" HiSeq 2000 2017-01-25T23:48:09.991767+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBBj0369BQ3qg2vYVZ667 ENCSR213QSF https://www.encodeproject.org/experiments/ENCSR213QSF transcription factor ATF3-human K562 immortalized cell line michael-snyder ENCODE3 no fastqs requires lab review ENCSR972ZBV https://www.encodeproject.org/experiments/ENCSR972ZBV transcription factor ATF7-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF518PQY https://www.encodeproject.org/files/ENCFF518PQY/@@download/ENCFF518PQY.bam ENCFF466NTV https://www.encodeproject.org/files/ENCFF466NTV/@@download/ENCFF466NTV.bam 96.7 M 0 90.0 M 0.930 PE 100 100 native 40.4 M 0.0 M 34.3 M 0.709 0.85 0.85 6.46 240 1.38 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ceade04-c5ea-4f68-b61d-f4ca36e1fcec/@@download/cross_correlation_plot/ENCFF002DORENCFF002EIJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB852VNZ michael-snyder:705_A_TruSeq_ATCACG "ENCFF002DOR,ENCFF002EIJ" HiSeq 2000 2016-10-29T18:02:46.277109+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B2B880jv1z876f29P7QP0x ENCSR972ZBV https://www.encodeproject.org/experiments/ENCSR972ZBV transcription factor ATF7-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF619XNM https://www.encodeproject.org/files/ENCFF619XNM/@@download/ENCFF619XNM.bam ENCFF980GTC https://www.encodeproject.org/files/ENCFF980GTC/@@download/ENCFF980GTC.bam 73.6 M 0 68.7 M 0.934 PE 100 100 native 30.6 M 0.0 M 22.4 M 0.610 0.73 0.73 3.59 235 1.29 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/533e0683-bd8a-421f-9002-a8189ed50ea7/@@download/cross_correlation_plot/ENCFF002DTYENCFF002DOV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB993OZH michael-snyder:705_B_TruSeq_ATCACG "ENCFF002DOV,ENCFF002DTY" HiSeq 2000 2016-10-29T17:59:48.627707+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B2BF80jv1yPb3j15B4q8PJ ENCSR000EGD https://www.encodeproject.org/experiments/ENCSR000EGD transcription factor BACH1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF151GOI https://www.encodeproject.org/files/ENCFF151GOI/@@download/ENCFF151GOI.bam ENCFF730CHT https://www.encodeproject.org/files/ENCFF730CHT/@@download/ENCFF730CHT.bam 20.9 M 0 19.6 M 0.936 SE 36 36 native 0.0 M 14.6 M 13.7 M 0.656 0.96 0.97 29.16 125 1.08 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/82186074-5506-4bd9-bf2c-b1ce8b6e0d8b/@@download/cross_correlation_plot/ENCFF000YFP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARO ENCFF000YFP Illumina Genome Analyzer 2016-12-10T17:52:29.672037+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162F2j03692f1gp513Pxg9J ENCSR000EGD https://www.encodeproject.org/experiments/ENCSR000EGD transcription factor BACH1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF540DXB https://www.encodeproject.org/files/ENCFF540DXB/@@download/ENCFF540DXB.bam ENCFF645XJA https://www.encodeproject.org/files/ENCFF645XJA/@@download/ENCFF645XJA.bam 33.2 M 0 32.7 M 0.983 SE 36 36 native 0.0 M 25.2 M 21.8 M 0.657 0.87 0.87 7.57 125 1.04 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/f19cc640-315a-4f43-a633-ae40ae1a329e/@@download/cross_correlation_plot/ENCFF000YFR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUT ENCFF000YFR Illumina Genome Analyzer 2016-12-10T19:29:42.292021+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162F7803695yqvv8q311Q51 ENCSR492LTS https://www.encodeproject.org/experiments/ENCSR492LTS "RNA binding protein,transcription factor" BCLAF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF323IVG https://www.encodeproject.org/files/ENCFF323IVG/@@download/ENCFF323IVG.bam ENCFF946YOG https://www.encodeproject.org/files/ENCFF946YOG/@@download/ENCFF946YOG.bam 57.5 M 0 48.0 M 0.834 PE 100 100 native 21.0 M 0.0 M 19.1 M 0.665 0.91 0.91 11.48 200 1.11 4.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd23a020-583f-4c77-a043-5d8d7b7de082/@@download/cross_correlation_plot/ENCFF744DBXENCFF834VSH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB051CXN michael-snyder:L-2907 "ENCFF744DBX,ENCFF834VSH" HiSeq 2000 2017-01-28T05:03:42.827462+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k3zj0369JXx505Zb65ZP3 ENCSR492LTS https://www.encodeproject.org/experiments/ENCSR492LTS "RNA binding protein,transcription factor" BCLAF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF862XFS https://www.encodeproject.org/files/ENCFF862XFS/@@download/ENCFF862XFS.bam ENCFF419APU https://www.encodeproject.org/files/ENCFF419APU/@@download/ENCFF419APU.bam 53.4 M 0 48.3 M 0.905 PE 100 100 native 21.1 M 0.0 M 20.1 M 0.755 0.95 0.95 21.90 185 1.10 3.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf9ac1b3-abf0-4a04-827b-6a41de533456/@@download/cross_correlation_plot/ENCFF188VONENCFF574FTC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB712HGK michael-snyder:L-2908 "ENCFF574FTC,ENCFF188VON" HiSeq 2000 2017-01-28T05:03:39.735340+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25k45j0369489G865ZjFfJv ENCSR808AKZ https://www.encodeproject.org/experiments/ENCSR808AKZ transcription factor BCOR-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF207LND https://www.encodeproject.org/files/ENCFF207LND/@@download/ENCFF207LND.bam ENCFF853ROL https://www.encodeproject.org/files/ENCFF853ROL/@@download/ENCFF853ROL.bam 60.0 M 0 57.6 M 0.959 PE 100 100 native 24.8 M 0.0 M 24.1 M 0.802 0.97 0.97 32.76 205 1.13 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a74bfef-63c4-488c-9456-8f77db6197b7/@@download/cross_correlation_plot/ENCFF949LLJENCFF036YYM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB786XSD michael-snyder:L-2041 "ENCFF036YYM,ENCFF949LLJ" HiSeq 2000 2016-10-09T17:08:01.929993+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4K700jv1QxJBfj5Zb2q0y ENCSR808AKZ https://www.encodeproject.org/experiments/ENCSR808AKZ transcription factor BCOR-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF541XEW https://www.encodeproject.org/files/ENCFF541XEW/@@download/ENCFF541XEW.bam ENCFF996EBH https://www.encodeproject.org/files/ENCFF996EBH/@@download/ENCFF996EBH.bam 64.4 M 0 61.9 M 0.960 PE 100 100 native 26.9 M 0.0 M 26.0 M 0.807 0.97 0.97 29.06 205 1.15 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2baf6bb-07d4-41d7-92eb-a292904430b2/@@download/cross_correlation_plot/ENCFF423KKFENCFF047XMV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB266GKU michael-snyder:L-2042 "ENCFF047XMV,ENCFF423KKF" HiSeq 2000 2016-10-09T17:08:41.938062+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4K8j0jv1vY92b0GYjVG3Q ENCSR000EGV https://www.encodeproject.org/experiments/ENCSR000EGV transcription factor BHLHE40-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF988VSQ https://www.encodeproject.org/files/ENCFF988VSQ/@@download/ENCFF988VSQ.bam ENCFF950BGX https://www.encodeproject.org/files/ENCFF950BGX/@@download/ENCFF950BGX.bam 40.7 M 0 35.8 M 0.879 SE 36 36 native 0.0 M 26.2 M 25.3 M 0.623 0.97 0.97 39.33 115 1.18 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/bcb24cd5-d7bb-4fe6-b356-84093b8d5075/@@download/cross_correlation_plot/ENCFF000YGJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJX ENCFF000YGJ Illumina Genome Analyzer 2016-12-10T19:09:09.984460+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1628k803697K4B1J71pxzPv ENCSR000EGV https://www.encodeproject.org/experiments/ENCSR000EGV transcription factor BHLHE40-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF213JOK https://www.encodeproject.org/files/ENCFF213JOK/@@download/ENCFF213JOK.bam ENCFF062TRG https://www.encodeproject.org/files/ENCFF062TRG/@@download/ENCFF062TRG.bam 38.5 M 0 35.7 M 0.927 SE 36 36 native 0.0 M 27.0 M 25.5 M 0.663 0.95 0.95 22.95 120 1.21 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/fff3a0fc-4f85-4d14-9615-7394e97a5581/@@download/cross_correlation_plot/ENCFF000YGQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUB ENCFF000YGQ Illumina Genome Analyzer 2016-12-10T19:02:12.011491+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1628yQ036933PVVJ7Qq014X ENCSR782WRO https://www.encodeproject.org/experiments/ENCSR782WRO "transcription factor,chromatin remodeller" BMI1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF110FDC https://www.encodeproject.org/files/ENCFF110FDC/@@download/ENCFF110FDC.bam ENCFF032TPO https://www.encodeproject.org/files/ENCFF032TPO/@@download/ENCFF032TPO.bam 31.7 M 0 31.4 M 0.988 SE 36 36 native 0.0 M 24.4 M 22.9 M 0.721 0.94 0.94 17.15 120 1.03 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/256ce643-6c32-4707-bcc0-5956fad65af4/@@download/cross_correlation_plot/ENCFF002EEY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB912TSW michael-snyder:BMI1_6964_K562_Rep1 ENCFF002EEY Illumina Genome Analyzer IIx 2016-10-09T17:00:00.759100+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43V00jv1XYYX2Fxk3f50x ENCSR782WRO https://www.encodeproject.org/experiments/ENCSR782WRO "transcription factor,chromatin remodeller" BMI1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF918CSI https://www.encodeproject.org/files/ENCFF918CSI/@@download/ENCFF918CSI.bam ENCFF163NLK https://www.encodeproject.org/files/ENCFF163NLK/@@download/ENCFF163NLK.bam 28.9 M 0 28.7 M 0.991 SE 36 36 native 0.0 M 22.1 M 20.3 M 0.703 0.92 0.92 12.89 115 1.03 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/29d36f85-2139-4c92-8feb-7ac90ec00c11/@@download/cross_correlation_plot/ENCFF002EEX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB326QCV michael-snyder:BMI1_6964_K562_Rep2 ENCFF002EEX Illumina Genome Analyzer IIx 2016-10-09T17:00:02.390522+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43XQ0jv1vY92b0GYjVFqF ENCSR223MLH https://www.encodeproject.org/experiments/ENCSR223MLH transcription factor BRCA1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF794MPI https://www.encodeproject.org/files/ENCFF794MPI/@@download/ENCFF794MPI.bam ENCFF110TPP https://www.encodeproject.org/files/ENCFF110TPP/@@download/ENCFF110TPP.bam 89.4 M 0 85.2 M 0.953 PE 100 100 native 37.0 M 0.0 M 32.0 M 0.716 0.87 0.87 7.44 245 1.04 3.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/64461829-2e7a-4b27-a147-133ba88364f7/@@download/cross_correlation_plot/ENCFF276RGLENCFF231TGV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB024FCM michael-snyder:L-3060 "ENCFF231TGV,ENCFF276RGL" HiSeq 4000 2016-10-27T22:28:16.256565+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bbX80369PQyG3V5B4501V ENCSR223MLH https://www.encodeproject.org/experiments/ENCSR223MLH transcription factor BRCA1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF490YME https://www.encodeproject.org/files/ENCFF490YME/@@download/ENCFF490YME.bam ENCFF496FJD https://www.encodeproject.org/files/ENCFF496FJD/@@download/ENCFF496FJD.bam 86.5 M 0 82.3 M 0.952 PE 100 100 native 35.6 M 0.0 M 28.5 M 0.660 0.80 0.80 4.95 265 1.04 6.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee4d82fa-b601-4d24-ae10-f3ceb46c7fab/@@download/cross_correlation_plot/ENCFF576EVCENCFF805AVF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB342MDN michael-snyder:L-3061 "ENCFF805AVF,ENCFF576EVC" HiSeq 4000 2016-10-27T22:27:45.713264+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bbbQ03695140QP5B2vxvb ENCSR350XWY https://www.encodeproject.org/experiments/ENCSR350XWY transcription factor C11orf30-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF077NYA https://www.encodeproject.org/files/ENCFF077NYA/@@download/ENCFF077NYA.bam ENCFF284AJX https://www.encodeproject.org/files/ENCFF284AJX/@@download/ENCFF284AJX.bam 124.6 M 0 101.7 M 0.816 PE 100 100 native 43.8 M 0.0 M 38.5 M 0.619 0.90 0.90 9.99 235 1.66 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/c47b6c93-9c14-42c0-a0bf-4050953c4d3e/@@download/cross_correlation_plot/ENCFF076YGTENCFF380PYR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB565EOJ michael-snyder:L-2238 "ENCFF076YGT,ENCFF380PYR" HiSeq 4000 2016-09-16T03:20:12.914946+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyyxj0369400B2BJvxzqXq ENCSR350XWY https://www.encodeproject.org/experiments/ENCSR350XWY transcription factor C11orf30-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF904OXK https://www.encodeproject.org/files/ENCFF904OXK/@@download/ENCFF904OXK.bam ENCFF464JSQ https://www.encodeproject.org/files/ENCFF464JSQ/@@download/ENCFF464JSQ.bam 35.4 M 0 33.5 M 0.948 PE 100 100 native 14.6 M 0.0 M 13.3 M 0.752 0.92 0.92 11.96 230 1.72 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/bae1a7df-cb4c-4873-8975-55f18f59cd44/@@download/cross_correlation_plot/ENCFF749RRKENCFF325DTB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB298MSG michael-snyder:L-2285 "ENCFF325DTB,ENCFF749RRK" HiSeq 4000 2016-09-16T03:15:27.690937+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyz1803696Pxzk584jfj8v ENCSR343IFJ https://www.encodeproject.org/experiments/ENCSR343IFJ transcription factor CC2D1A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF138PZX https://www.encodeproject.org/files/ENCFF138PZX/@@download/ENCFF138PZX.bam ENCFF689TUR https://www.encodeproject.org/files/ENCFF689TUR/@@download/ENCFF689TUR.bam 62.2 M 0 55.6 M 0.894 PE 100 100 native 24.2 M 0.0 M 20.8 M 0.669 0.86 0.86 7.14 215 1.10 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/fda97cd1-bed5-483a-8717-d9d06437f887/@@download/cross_correlation_plot/ENCFF608EHVENCFF197ETF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB913NPL michael-snyder:L-1980 "ENCFF197ETF,ENCFF608EHV" HiSeq 2000 2016-10-09T17:03:38.399843+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XZQ0jv1QxJBfj5Zb2q4v ENCSR343IFJ https://www.encodeproject.org/experiments/ENCSR343IFJ transcription factor CC2D1A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF039QUZ https://www.encodeproject.org/files/ENCFF039QUZ/@@download/ENCFF039QUZ.bam ENCFF306KNJ https://www.encodeproject.org/files/ENCFF306KNJ/@@download/ENCFF306KNJ.bam 72.1 M 0 66.0 M 0.916 PE 100 100 native 28.8 M 0.0 M 24.8 M 0.687 0.86 0.86 6.98 205 1.15 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/2aa5ed3b-b271-45b0-80d7-29804310c0a3/@@download/cross_correlation_plot/ENCFF160TXMENCFF134VGP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB211LQN michael-snyder:L-1981 "ENCFF160TXM,ENCFF134VGP" HiSeq 2000 2016-10-09T17:07:28.667282+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Xf00jv1vY92b0GYjVG89 ENCSR121PFY https://www.encodeproject.org/experiments/ENCSR121PFY transcription factor CDC5L-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF201MXQ https://www.encodeproject.org/files/ENCFF201MXQ/@@download/ENCFF201MXQ.bam ENCFF014PIX https://www.encodeproject.org/files/ENCFF014PIX/@@download/ENCFF014PIX.bam 53.7 M 0 52.8 M 0.983 PE 100 100 native 23.3 M 0.0 M 22.2 M 0.825 0.95 0.95 22.12 200 1.09 3.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2a411d1-0e33-4ef4-99c8-115afbd52a55/@@download/cross_correlation_plot/ENCFF847ZNJENCFF300KRT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB691DTZ michael-snyder:L-2278 "ENCFF847ZNJ,ENCFF300KRT" HiSeq 2000 2016-10-09T17:12:06.897160+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3j600jv1XYYX2Fxk3f4Y8 ENCSR121PFY https://www.encodeproject.org/experiments/ENCSR121PFY transcription factor CDC5L-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF049RJI https://www.encodeproject.org/files/ENCFF049RJI/@@download/ENCFF049RJI.bam ENCFF357YDT https://www.encodeproject.org/files/ENCFF357YDT/@@download/ENCFF357YDT.bam 53.0 M 0 51.6 M 0.973 PE 100 100 native 22.9 M 0.0 M 21.5 M 0.809 0.94 0.94 17.10 195 1.10 3.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc4fda36-6a61-402b-9236-1425216a8513/@@download/cross_correlation_plot/ENCFF899BAMENCFF146CPM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB557YKO michael-snyder:L-2279 "ENCFF146CPM,ENCFF899BAM" HiSeq 2000 2016-10-09T17:12:06.802796+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3j7Q0jv1XYYX2Fxk3f4YV ENCSR000EHE https://www.encodeproject.org/experiments/ENCSR000EHE transcription factor CEBPB-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF729WGC https://www.encodeproject.org/files/ENCFF729WGC/@@download/ENCFF729WGC.bam ENCFF763YQX https://www.encodeproject.org/files/ENCFF763YQX/@@download/ENCFF763YQX.bam 31.5 M 0 28.0 M 0.890 SE 36 36 native 0.0 M 20.9 M 19.4 M 0.616 0.93 0.95 28.52 115 1.62 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c3f87b5-2d1e-4dc7-acf2-1dbb4a1fecaa/@@download/cross_correlation_plot/ENCFF000YIC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVH ENCFF000YIC Illumina Genome Analyzer 2016-12-10T21:40:17.916874+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16368803693J2XX63yZ7BxQ ENCSR000EHE https://www.encodeproject.org/experiments/ENCSR000EHE transcription factor CEBPB-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF953ZZL https://www.encodeproject.org/files/ENCFF953ZZL/@@download/ENCFF953ZZL.bam ENCFF443POA https://www.encodeproject.org/files/ENCFF443POA/@@download/ENCFF443POA.bam 25.3 M 0 23.4 M 0.926 SE 36 36 native 0.0 M 17.3 M 16.2 M 0.639 0.93 0.95 21.55 130 1.49 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/39a1814f-77f9-463d-9379-22f1241abb7d/@@download/cross_correlation_plot/ENCFF000YID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVG ENCFF000YID Illumina Genome Analyzer 2016-12-10T21:29:43.584411+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1636J00369KQ3Yk1yz1kfZY ENCSR618GDK https://www.encodeproject.org/experiments/ENCSR618GDK "RNA binding protein,transcription factor" CEBPZ-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF576EDK https://www.encodeproject.org/files/ENCFF576EDK/@@download/ENCFF576EDK.bam ENCFF351YEW https://www.encodeproject.org/files/ENCFF351YEW/@@download/ENCFF351YEW.bam 24.1 M 0 22.3 M 0.923 SE 36 36 native 0.0 M 16.9 M 16.3 M 0.676 0.97 0.97 29.53 110 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/25ce52d7-07ae-421d-94e5-b85c621f2479/@@download/cross_correlation_plot/ENCFF002EEE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB194JWF michael-snyder:CEBPZ_SAB2100398_K562_Rep1 ENCFF002EEE Illumina Genome Analyzer IIx 2016-10-09T17:00:32.398581+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv491Q0jv1f60PxyZ9JGP92 ENCSR618GDK https://www.encodeproject.org/experiments/ENCSR618GDK "RNA binding protein,transcription factor" CEBPZ-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF799RPS https://www.encodeproject.org/files/ENCFF799RPS/@@download/ENCFF799RPS.bam ENCFF588IRF https://www.encodeproject.org/files/ENCFF588IRF/@@download/ENCFF588IRF.bam 29.5 M 0 27.4 M 0.929 SE 36 36 native 0.0 M 21.1 M 19.0 M 0.643 0.90 0.90 9.85 120 1.05 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/21cbfb94-fe56-4437-9042-16022c1e449b/@@download/cross_correlation_plot/ENCFF002EEI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB154RYN michael-snyder:CEBPZ_SAB2100398_K562_Rep4 ENCFF002EEI Illumina Genome Analyzer IIx 2016-10-09T17:00:20.099805+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv492j0jv1QxJBfj5Zb2ppQ ENCSR065XVO https://www.encodeproject.org/experiments/ENCSR065XVO transcription factor CHAMP1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF824HGA https://www.encodeproject.org/files/ENCFF824HGA/@@download/ENCFF824HGA.bam ENCFF653KCU https://www.encodeproject.org/files/ENCFF653KCU/@@download/ENCFF653KCU.bam 131.3 M 0 123.3 M 0.939 PE 100 100 native 53.0 M 0.0 M 43.1 M 0.657 0.86 0.86 7.01 190 1.06 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a6b7599-0e14-4947-a1f0-00e0a9b2610c/@@download/cross_correlation_plot/ENCFF088KVKENCFF576YEJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB935DOS michael-snyder:L-1760 "ENCFF088KVK,ENCFF576YEJ" HiSeq 4000 2016-09-16T03:25:23.156468+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyPpj0369B06vx3GQPgx4P ENCSR065XVO https://www.encodeproject.org/experiments/ENCSR065XVO transcription factor CHAMP1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF432NAV https://www.encodeproject.org/files/ENCFF432NAV/@@download/ENCFF432NAV.bam ENCFF769FYR https://www.encodeproject.org/files/ENCFF769FYR/@@download/ENCFF769FYR.bam 88.5 M 0 83.8 M 0.946 PE 100 100 native 36.3 M 0.0 M 32.2 M 0.727 0.90 0.90 9.95 220 1.07 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/6069ae71-6b23-4dbc-b8e0-fd6917a71556/@@download/cross_correlation_plot/ENCFF740JJXENCFF507REW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB140LPS michael-snyder:L-1761 "ENCFF507REW,ENCFF740JJX" HiSeq 4000 2016-09-16T03:21:22.179944+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyPyQ0369JpJK47VQg9x0Q ENCSR315NNL https://www.encodeproject.org/experiments/ENCSR315NNL transcription factor CHAMP1-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR000EHD https://www.encodeproject.org/experiments/ENCSR000EHD "RNA binding protein,transcription factor" CHD2-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF699ZAV https://www.encodeproject.org/files/ENCFF699ZAV/@@download/ENCFF699ZAV.bam ENCFF072EPY https://www.encodeproject.org/files/ENCFF072EPY/@@download/ENCFF072EPY.bam 24.8 M 0 22.6 M 0.913 SE 36 36 native 0.0 M 17.1 M 16.0 M 0.646 0.94 0.97 52.27 120 1.33 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1c13153-75a8-46fc-84b2-dca7dfd5a492/@@download/cross_correlation_plot/ENCFF000YJT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADK ENCFF000YJT Illumina Genome Analyzer 2016-12-11T04:53:50.515611+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667J003697yz601ypVJ3qq ENCSR000EHD https://www.encodeproject.org/experiments/ENCSR000EHD "RNA binding protein,transcription factor" CHD2-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF304KIE https://www.encodeproject.org/files/ENCFF304KIE/@@download/ENCFF304KIE.bam ENCFF790ZVP https://www.encodeproject.org/files/ENCFF790ZVP/@@download/ENCFF790ZVP.bam 24.6 M 0 23.1 M 0.940 SE 36 36 native 0.0 M 17.2 M 16.6 M 0.674 0.96 0.98 47.36 140 1.19 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd49d8eb-465f-45ca-a407-ed72beca1a69/@@download/cross_correlation_plot/ENCFF000YJU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARL ENCFF000YJU Illumina Genome Analyzer 2016-12-11T04:55:46.210331+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1667X80369KbxV61z4GFvxQ ENCSR080EOT https://www.encodeproject.org/experiments/ENCSR080EOT control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF156FED https://www.encodeproject.org/files/ENCFF156FED/@@download/ENCFF156FED.bam ENCFF993HAX https://www.encodeproject.org/files/ENCFF993HAX/@@download/ENCFF993HAX.bam 41.5 M 0 41.2 M 0.992 SE 36 36 None 0.0 M 32.6 M 29.9 M 0.721 0.93 0.93 14.62 110 1.02 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/03c071e6-c1fa-4e71-999b-9ab6a56bbf5e/@@download/cross_correlation_plot/ENCFF002ECW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB618PJR michael-snyder:Input_K562_Rep1 ENCFF002ECW Illumina Genome Analyzer IIx 2016-05-06T18:15:13.487844+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq5xQ036900Z43v02XzqQQ ENCSR080EOT https://www.encodeproject.org/experiments/ENCSR080EOT control Control-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF577FNG https://www.encodeproject.org/files/ENCFF577FNG/@@download/ENCFF577FNG.bam ENCFF674KBD https://www.encodeproject.org/files/ENCFF674KBD/@@download/ENCFF674KBD.bam 40.8 M 0 40.5 M 0.994 SE 36 36 None 0.0 M 32.1 M 29.8 M 0.732 0.94 0.94 16.99 130 1.02 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/3efa9929-1ab3-49b5-8b07-5696c3d78724/@@download/cross_correlation_plot/ENCFF002ECS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB902CBU michael-snyder:Input_K562_Rep2 ENCFF002ECS Illumina Genome Analyzer IIx 2016-05-06T18:14:59.688834+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq5z003690KqX0q02qJpBq ENCSR085OAX https://www.encodeproject.org/experiments/ENCSR085OAX control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF898KHD https://www.encodeproject.org/files/ENCFF898KHD/@@download/ENCFF898KHD.bam ENCFF680JEZ https://www.encodeproject.org/files/ENCFF680JEZ/@@download/ENCFF680JEZ.bam 65.4 M 0 64.1 M 0.980 PE 100 None 27.6 M 0.0 M 26.6 M 0.814 0.98 0.98 59.06 195 1.07 3.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/91538679-2ca9-4a29-8785-edcac00fefdc/@@download/cross_correlation_plot/ENCFF760WPAENCFF950USL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB340ZRV michael-snyder:L-2517 "ENCFF760WPA,ENCFF950USL" HiSeq 2000 2016-05-06T18:19:47.678748+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq66003699b4kxvj2Yx1Kg ENCSR097PLG https://www.encodeproject.org/experiments/ENCSR097PLG control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF780MVW https://www.encodeproject.org/files/ENCFF780MVW/@@download/ENCFF780MVW.bam ENCFF078QXI https://www.encodeproject.org/files/ENCFF078QXI/@@download/ENCFF078QXI.bam 84.1 M 0 83.2 M 0.989 PE 100 100 None 37.1 M 0.0 M 34.2 M 0.815 0.93 0.93 14.20 265 1.05 7.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/820532b7-6daf-4e91-b86d-225336a74c06/@@download/cross_correlation_plot/ENCFF698OMKENCFF340RXU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB664IVC michael-snyder:L-2436 "ENCFF698OMK,ENCFF340RXU" HiSeq 2000 2016-05-06T18:20:31.797506+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq6800369J44Fjx82zx7P7 ENCSR108OFV https://www.encodeproject.org/experiments/ENCSR108OFV control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF752BZZ https://www.encodeproject.org/files/ENCFF752BZZ/@@download/ENCFF752BZZ.bam ENCFF956FKI https://www.encodeproject.org/files/ENCFF956FKI/@@download/ENCFF956FKI.bam 132.6 M 0 130.0 M 0.980 PE 100 100 native 55.3 M 0.0 M 54.5 M 0.822 0.99 0.99 72.57 240 1.02 9.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/d802216e-2b65-4e59-b470-46759b666efe/@@download/cross_correlation_plot/ENCFF144ZOKENCFF514OKS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB365EOZ peggy-farnham:ZNF512-INPUT-library "ENCFF514OKS,ENCFF144ZOK" HiSeq 2000 2016-10-29T18:19:12.114409+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xz8j0jv1xg5PX69583gg0 ENCSR159MTA https://www.encodeproject.org/experiments/ENCSR159MTA control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF713PVH https://www.encodeproject.org/files/ENCFF713PVH/@@download/ENCFF713PVH.bam ENCFF065XTC https://www.encodeproject.org/files/ENCFF065XTC/@@download/ENCFF065XTC.bam 141.3 M 0 135.7 M 0.961 PE 100 100 native 55.0 M 0.0 M 52.8 M 0.747 0.96 0.96 25.06 135 1.01 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c85771a-5280-44e7-b925-09151dab9a10/@@download/cross_correlation_plot/ENCFF953WVUENCFF911YKD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB080KZF peggy-farnham:CEBPG-INPUT-library "ENCFF953WVU,ENCFF911YKD" HiSeq 2000 2017-04-09T00:14:02.704296+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z06g80369PkjqY4vkP6FkZ ENCSR173USI https://www.encodeproject.org/experiments/ENCSR173USI control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF910IKB https://www.encodeproject.org/files/ENCFF910IKB/@@download/ENCFF910IKB.bam ENCFF739EFS https://www.encodeproject.org/files/ENCFF739EFS/@@download/ENCFF739EFS.bam 95.2 M 0 94.0 M 0.988 PE 100 100 None 42.5 M 0.0 M 38.9 M 0.817 0.93 0.92 13.14 170 1.06 5.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/014c3538-8fb6-4fdf-87fa-fe913b8e6424/@@download/cross_correlation_plot/ENCFF002EFFENCFF002EFH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB783NHP "michael-snyder:734_B_TruSeq_CAGATC,michael-snyder:L-504" "ENCFF002EFH,ENCFF002EFF" HiSeq 2000 2016-05-06T18:23:28.150158+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq7G803693y6b8xQ2p1gBq ENCSR173USI https://www.encodeproject.org/experiments/ENCSR173USI control Control-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF227IZS https://www.encodeproject.org/files/ENCFF227IZS/@@download/ENCFF227IZS.bam ENCFF122LEY https://www.encodeproject.org/files/ENCFF122LEY/@@download/ENCFF122LEY.bam 90.5 M 0 89.4 M 0.988 PE 100 100 None 40.4 M 0.0 M 35.9 M 0.794 0.90 0.90 10.07 180 1.07 5.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/e81c3deb-4db0-483c-b1d1-76cc8daca187/@@download/cross_correlation_plot/ENCFF002EFDENCFF002EFA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB359ZTD "michael-snyder:734_B_TruSeq_GATCAG,michael-snyder:L-505" "ENCFF002EFA,ENCFF002EFD" HiSeq 2000 2016-05-06T18:22:44.656819+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq7K803693y6b8xQ2p1gF3 ENCSR176UHI https://www.encodeproject.org/experiments/ENCSR176UHI control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF652CFB https://www.encodeproject.org/files/ENCFF652CFB/@@download/ENCFF652CFB.bam ENCFF676RXD https://www.encodeproject.org/files/ENCFF676RXD/@@download/ENCFF676RXD.bam 75.9 M 0 74.3 M 0.979 PE 100 100 native 33.0 M 0.0 M 31.1 M 0.819 0.95 0.95 20.72 175 1.07 4.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/69943651-b979-4dcb-8da2-a70e49061285/@@download/cross_correlation_plot/ENCFF725WQMENCFF768JTI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB766EJE michael-snyder:L-2532 "ENCFF768JTI,ENCFF725WQM" HiSeq 4000 2016-12-15T10:42:36.460329+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y6qQ03691Gf0q79x2xqxk ENCSR198KYG https://www.encodeproject.org/experiments/ENCSR198KYG control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF700BKM https://www.encodeproject.org/files/ENCFF700BKM/@@download/ENCFF700BKM.bam ENCFF250MUN https://www.encodeproject.org/files/ENCFF250MUN/@@download/ENCFF250MUN.bam 54.9 M 0 53.7 M 0.978 PE 100 100 None 23.1 M 0.0 M 21.1 M 0.770 0.92 0.92 12.82 200 1.08 4.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/038636e8-5df9-4dd1-bed4-aa4ffc4e3e1f/@@download/cross_correlation_plot/ENCFF860YMHENCFF769QGP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB089NIL michael-snyder:L-2564 "ENCFF769QGP,ENCFF860YMH" HiSeq 2000 2016-05-06T18:17:43.044769+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq7yQ03699b4kxvj2Yx1Q9 ENCSR209YCR https://www.encodeproject.org/experiments/ENCSR209YCR control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF680XQR https://www.encodeproject.org/files/ENCFF680XQR/@@download/ENCFF680XQR.bam ENCFF783ZDX https://www.encodeproject.org/files/ENCFF783ZDX/@@download/ENCFF783ZDX.bam 86.2 M 0 84.4 M 0.979 PE 100 100 native 35.7 M 0.0 M 34.7 M 0.804 0.98 0.98 49.28 220 1.03 3.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4bff7cf-f391-4e62-8dfa-8aafc230a64b/@@download/cross_correlation_plot/ENCFF406XFMENCFF055UND.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB395VPY peggy-farnham:ZNF740-INPUT-library "ENCFF406XFM,ENCFF055UND" HiSeq 2000 2016-10-29T18:12:35.582861+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xzGQ0jv1X3pJJqk9y09pX ENCSR249OFO https://www.encodeproject.org/experiments/ENCSR249OFO control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF247YFL https://www.encodeproject.org/files/ENCFF247YFL/@@download/ENCFF247YFL.bam ENCFF235PUM https://www.encodeproject.org/files/ENCFF235PUM/@@download/ENCFF235PUM.bam 60.2 M 0 59.4 M 0.987 PE 100 None 26.4 M 0.0 M 25.2 M 0.838 0.96 0.96 23.33 235 1.07 10.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/61334262-485e-4082-8369-d0bda59272ae/@@download/cross_correlation_plot/ENCFF918QAPENCFF419AVJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB503VCE michael-snyder:L-2411 "ENCFF419AVJ,ENCFF918QAP" HiSeq 2000 2016-05-06T18:19:23.310208+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq978036986q4kkQ2Q0KJX ENCSR256DQC https://www.encodeproject.org/experiments/ENCSR256DQC control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF002WSA https://www.encodeproject.org/files/ENCFF002WSA/@@download/ENCFF002WSA.bam ENCFF819UEP https://www.encodeproject.org/files/ENCFF819UEP/@@download/ENCFF819UEP.bam 39.2 M 0 38.0 M 0.969 PE 100 100 None 16.4 M 0.0 M 16.2 M 0.825 0.99 0.99 87.53 170 1.13 3.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/70d515d8-f3a7-40a9-a637-439232d34e6c/@@download/cross_correlation_plot/ENCFF717YHUENCFF031XFH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB663ULD michael-snyder:L-2481 "ENCFF717YHU,ENCFF031XFH" HiSeq 2000 2016-05-06T18:16:00.724416+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq9X003691Q4QQpZ2q8BFF ENCSR298DKW https://www.encodeproject.org/experiments/ENCSR298DKW control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF868RUE https://www.encodeproject.org/files/ENCFF868RUE/@@download/ENCFF868RUE.bam ENCFF664ACJ https://www.encodeproject.org/files/ENCFF664ACJ/@@download/ENCFF664ACJ.bam 55.8 M 0 54.5 M 0.976 PE 100 100 None 23.2 M 0.0 M 22.5 M 0.804 0.98 0.98 61.11 200 1.09 7.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/145d5ede-bab0-4602-985f-f66867ee1022/@@download/cross_correlation_plot/ENCFF427TURENCFF422LHF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB994GJI michael-snyder:L-2529 "ENCFF427TUR,ENCFF422LHF" HiSeq 2000 2016-05-06T18:18:54.575020+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqB80036961GyjjQ2QP8GZ ENCSR298QDM https://www.encodeproject.org/experiments/ENCSR298QDM control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF390ATQ https://www.encodeproject.org/files/ENCFF390ATQ/@@download/ENCFF390ATQ.bam ENCFF331RMR https://www.encodeproject.org/files/ENCFF331RMR/@@download/ENCFF331RMR.bam 38.9 M 0 37.9 M 0.975 PE 100 100 None 16.5 M 0.0 M 15.7 M 0.806 0.96 0.96 25.00 200 1.10 5.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3ef9789-cd95-4af0-aefa-9c340828bcfe/@@download/cross_correlation_plot/ENCFF703OVMENCFF898SRJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB977LNM michael-snyder:L-2596 "ENCFF898SRJ,ENCFF703OVM" HiSeq 2000 2016-05-06T18:16:02.679885+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqBBj03692Fy2Pk02vGV9y ENCSR329YMD https://www.encodeproject.org/experiments/ENCSR329YMD control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF343UNB https://www.encodeproject.org/files/ENCFF343UNB/@@download/ENCFF343UNB.bam ENCFF303IUY https://www.encodeproject.org/files/ENCFF303IUY/@@download/ENCFF303IUY.bam 62.1 M 0 60.6 M 0.974 PE 100 None 25.5 M 0.0 M 24.6 M 0.791 0.97 0.97 39.08 195 1.07 3.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/8fb7f7be-f126-433a-8b10-c67135353bf2/@@download/cross_correlation_plot/ENCFF338LYQENCFF746XJG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB560AIC michael-snyder:L-2546 "ENCFF338LYQ,ENCFF746XJG" HiSeq 2000 2016-05-06T18:19:27.675465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqF7Q036929FJGg42Xq1qY ENCSR369LPC https://www.encodeproject.org/experiments/ENCSR369LPC control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF266FHE https://www.encodeproject.org/files/ENCFF266FHE/@@download/ENCFF266FHE.bam ENCFF181XUO https://www.encodeproject.org/files/ENCFF181XUO/@@download/ENCFF181XUO.bam 73.3 M 0 71.7 M 0.978 PE 100 None 30.7 M 0.0 M 29.9 M 0.815 0.99 0.99 82.84 190 1.06 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/271599c2-7ec6-4b35-afde-458458b2afa4/@@download/cross_correlation_plot/ENCFF931LWJENCFF928HTI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB611KDW michael-snyder:L-2516 "ENCFF931LWJ,ENCFF928HTI" HiSeq 2000 2016-05-06T18:19:24.103029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqG1j03691Q4QQpZ2q8BPq ENCSR375CYS https://www.encodeproject.org/experiments/ENCSR375CYS control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF886VAQ https://www.encodeproject.org/files/ENCFF886VAQ/@@download/ENCFF886VAQ.bam 52.1 M 0 51.2 M 0.982 PE 100 100 native 22.2 M 0.0 M 20.4 M 0.785 0.94 0.94 16.58 200 1.09 5.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/8192287a-ac55-454f-81ec-49bbed767c68/@@download/cross_correlation_plot/ENCFF160VFXENCFF439KJM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB959EQZ michael-snyder:L-2370 "ENCFF439KJM,ENCFF160VFX" HiSeq 2000 2016-10-24T15:57:06.318201+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzgBYxj03691BqxPKQFG34j1 ENCSR387MCX https://www.encodeproject.org/experiments/ENCSR387MCX control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF243UPF https://www.encodeproject.org/files/ENCFF243UPF/@@download/ENCFF243UPF.bam ENCFF664TWH https://www.encodeproject.org/files/ENCFF664TWH/@@download/ENCFF664TWH.bam 80.3 M 0 79.4 M 0.988 PE 100 100 None 35.2 M 0.0 M 32.5 M 0.810 0.94 0.94 15.92 280 1.06 7.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/16260777-af47-4442-8349-d6116362fbba/@@download/cross_correlation_plot/ENCFF285JYIENCFF420KFM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB045WLS michael-snyder:L-2437 "ENCFF420KFM,ENCFF285JYI" HiSeq 2000 2016-05-06T18:18:51.128647+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGB803692Fy2Pk02vGVGJ ENCSR412HJH https://www.encodeproject.org/experiments/ENCSR412HJH control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF306LVM https://www.encodeproject.org/files/ENCFF306LVM/@@download/ENCFF306LVM.bam ENCFF129RAC https://www.encodeproject.org/files/ENCFF129RAC/@@download/ENCFF129RAC.bam 69.8 M 0 67.9 M 0.974 PE 100 100 native 28.6 M 0.0 M 27.2 M 0.780 0.98 0.98 40.29 200 1.06 5.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed3a77e1-cdc3-4d05-af9a-8a547128736c/@@download/cross_correlation_plot/ENCFF650GDLENCFF132ASO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB447KRR michael-snyder:L-2544 "ENCFF132ASO,ENCFF650GDL" HiSeq 2000 2016-10-29T18:08:55.881621+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xyy00jv1V3377YJjkvQ6b ENCSR468BNS https://www.encodeproject.org/experiments/ENCSR468BNS control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF276OII https://www.encodeproject.org/files/ENCFF276OII/@@download/ENCFF276OII.bam ENCFF578IIL https://www.encodeproject.org/files/ENCFF578IIL/@@download/ENCFF578IIL.bam 80.9 M 0 79.8 M 0.986 PE 100 100 native 35.5 M 0.0 M 31.5 M 0.778 0.89 0.89 8.94 220 1.06 7.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/f999f6e0-9829-4344-a891-f1fa5037d131/@@download/cross_correlation_plot/ENCFF236YCRENCFF113QAJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB491YHQ michael-snyder:L-2429 "ENCFF236YCR,ENCFF113QAJ" HiSeq 2000 2016-08-30T17:54:22.864865+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ48j03695qVFpfJBXYkKq ENCSR489RLS https://www.encodeproject.org/experiments/ENCSR489RLS control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF073AHU https://www.encodeproject.org/files/ENCFF073AHU/@@download/ENCFF073AHU.bam ENCFF399UCQ https://www.encodeproject.org/files/ENCFF399UCQ/@@download/ENCFF399UCQ.bam 73.6 M 0 72.0 M 0.977 PE 100 100 None 30.8 M 0.0 M 30.2 M 0.820 0.99 0.99 81.36 200 1.06 3.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e3dac3a-2a55-4aa4-aaef-2cf223492983/@@download/cross_correlation_plot/ENCFF823MCHENCFF904LUM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB189DCJ michael-snyder:L-2533 "ENCFF904LUM,ENCFF823MCH" HiSeq 2000 2016-05-06T18:18:04.905471+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKGj03690j2jgp42pQ2zJ ENCSR492SGS https://www.encodeproject.org/experiments/ENCSR492SGS control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF458FYW https://www.encodeproject.org/files/ENCFF458FYW/@@download/ENCFF458FYW.bam ENCFF402FMI https://www.encodeproject.org/files/ENCFF402FMI/@@download/ENCFF402FMI.bam 82.4 M 0 80.8 M 0.981 PE 100 100 native 34.7 M 0.0 M 33.7 M 0.818 0.98 0.98 50.31 220 1.03 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/873af187-0b81-46fb-81c3-1dabfa2a9088/@@download/cross_correlation_plot/ENCFF598DYOENCFF821AJH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB126ABP peggy-farnham:GTF2A2-INPUT-library "ENCFF598DYO,ENCFF821AJH" HiSeq 2000 2016-10-29T18:11:49.628427+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xyqj0jv1X404175P5YZGg ENCSR545WDI https://www.encodeproject.org/experiments/ENCSR545WDI control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF824YEY https://www.encodeproject.org/files/ENCFF824YEY/@@download/ENCFF824YEY.bam ENCFF994WBV https://www.encodeproject.org/files/ENCFF994WBV/@@download/ENCFF994WBV.bam 72.8 M 0 72.0 M 0.989 PE 100 100 None 31.9 M 0.0 M 28.0 M 0.770 0.89 0.88 8.42 315 1.06 7.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/b92d2fa5-db14-437b-bfa9-072e4913f5a8/@@download/cross_correlation_plot/ENCFF795KJTENCFF067HZB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB096NOI michael-snyder:L-2438 "ENCFF795KJT,ENCFF067HZB" HiSeq 2000 2016-05-06T18:17:41.540822+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKy0036961GyjjQ2QP8VB ENCSR557SDQ https://www.encodeproject.org/experiments/ENCSR557SDQ control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF596JNR https://www.encodeproject.org/files/ENCFF596JNR/@@download/ENCFF596JNR.bam ENCFF485XVB https://www.encodeproject.org/files/ENCFF485XVB/@@download/ENCFF485XVB.bam 33.7 M 0 32.7 M 0.969 PE 100 100 None 14.1 M 0.0 M 13.8 M 0.821 0.99 0.99 74.30 180 1.14 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/723a01b2-d440-4a73-8725-b50c4edc5fe0/@@download/cross_correlation_plot/ENCFF217VQEENCFF241ECN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB527HRB michael-snyder:L-2484 "ENCFF217VQE,ENCFF241ECN" HiSeq 2000 2016-05-06T18:12:27.238716+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqPPj036986q4kkQ2Q0KYp ENCSR565XPP https://www.encodeproject.org/experiments/ENCSR565XPP control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF394JQH https://www.encodeproject.org/files/ENCFF394JQH/@@download/ENCFF394JQH.bam ENCFF744QNF https://www.encodeproject.org/files/ENCFF744QNF/@@download/ENCFF744QNF.bam 54.3 M 0 53.2 M 0.980 PE 100 100 native 22.6 M 0.0 M 21.6 M 0.797 0.97 0.97 39.27 240 1.05 3.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/9660177b-3876-4e2d-a7da-0b616a19ff8e/@@download/cross_correlation_plot/ENCFF224SOHENCFF451VBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB306PZQ peggy-farnham:ATF3-INPUT-library "ENCFF224SOH,ENCFF451VBV" HiSeq 2000 2016-10-29T18:07:56.177335+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xyf80jv1Qy5BPY9P9V714 ENCSR578DNH https://www.encodeproject.org/experiments/ENCSR578DNH control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF399WOX https://www.encodeproject.org/files/ENCFF399WOX/@@download/ENCFF399WOX.bam ENCFF880EVO https://www.encodeproject.org/files/ENCFF880EVO/@@download/ENCFF880EVO.bam 77.9 M 0 76.9 M 0.987 PE 100 100 None 34.2 M 0.0 M 30.5 M 0.782 0.90 0.90 9.38 235 1.06 8.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/e70d83f5-3869-4cc4-9db6-e6c91793441f/@@download/cross_correlation_plot/ENCFF047NSEENCFF743SMH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB956QKL michael-snyder:L-2427 "ENCFF047NSE,ENCFF743SMH" HiSeq 2000 2016-05-06T18:15:43.028057+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqPy003692Fy2Pk02vGVQp ENCSR578SNR https://www.encodeproject.org/experiments/ENCSR578SNR control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF209VFR https://www.encodeproject.org/files/ENCFF209VFR/@@download/ENCFF209VFR.bam ENCFF797ZEF https://www.encodeproject.org/files/ENCFF797ZEF/@@download/ENCFF797ZEF.bam 68.1 M 0 65.2 M 0.958 PE 100 100 None 27.0 M 0.0 M 26.1 M 0.767 0.98 0.98 63.36 160 1.08 4.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/018d46bd-0cb3-4ec8-8af9-893ee2c11a03/@@download/cross_correlation_plot/ENCFF390XLAENCFF783BXZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB955VGG michael-snyder:L-2499 "ENCFF783BXZ,ENCFF390XLA" HiSeq 2000 2016-05-06T18:15:12.293492+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQ08036961GyjjQ2QP8Vy ENCSR614FBE https://www.encodeproject.org/experiments/ENCSR614FBE control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF816BIC https://www.encodeproject.org/files/ENCFF816BIC/@@download/ENCFF816BIC.bam ENCFF819OTY https://www.encodeproject.org/files/ENCFF819OTY/@@download/ENCFF819OTY.bam 83.0 M 0 81.2 M 0.978 PE 100 100 native 36.0 M 0.0 M 33.3 M 0.803 0.93 0.93 14.15 220 1.06 7.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/d59c82ef-509f-4978-9570-3b980b580168/@@download/cross_correlation_plot/ENCFF258YTRENCFF910GLH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB877BWJ michael-snyder:L-2439 "ENCFF258YTR,ENCFF910GLH" HiSeq 2000 2016-10-29T18:09:52.635748+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xyjj0jv1z876f29P7QK1f ENCSR623SDL https://www.encodeproject.org/experiments/ENCSR623SDL control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF177OCL https://www.encodeproject.org/files/ENCFF177OCL/@@download/ENCFF177OCL.bam ENCFF471FGD https://www.encodeproject.org/files/ENCFF471FGD/@@download/ENCFF471FGD.bam 84.5 M 0 81.2 M 0.962 PE 100 100 native 34.0 M 0.0 M 32.3 M 0.766 0.96 0.96 27.03 180 1.07 6.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/6abc2316-6d7e-4c02-b4f6-46ba5496ddc9/@@download/cross_correlation_plot/ENCFF417ORBENCFF839JCV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB906RKA michael-snyder:L-2468 "ENCFF417ORB,ENCFF839JCV" HiSeq 2000 2016-10-29T18:14:33.962461+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xz380jv1X404175P5YZJ0 ENCSR632PAG https://www.encodeproject.org/experiments/ENCSR632PAG control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF790TAN https://www.encodeproject.org/files/ENCFF790TAN/@@download/ENCFF790TAN.bam ENCFF682IVV https://www.encodeproject.org/files/ENCFF682IVV/@@download/ENCFF682IVV.bam 123.3 M 0 119.3 M 0.968 PE 100 100 native 52.3 M 0.0 M 37.8 M 0.613 0.74 0.73 3.63 215 1.05 3.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/38eeacb7-b0d0-4735-906b-6b5b1e0f492e/@@download/cross_correlation_plot/ENCFF498JMOENCFF502GTS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB010XKT michael-snyder:L-3064 "ENCFF502GTS,ENCFF498JMO" HiSeq 4000 2016-09-16T03:23:39.023450+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyP5j03696Pxzk584jfj11 ENCSR632PAG https://www.encodeproject.org/experiments/ENCSR632PAG control Control-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF712WXB https://www.encodeproject.org/files/ENCFF712WXB/@@download/ENCFF712WXB.bam ENCFF799RFR https://www.encodeproject.org/files/ENCFF799RFR/@@download/ENCFF799RFR.bam 123.0 M 0 115.3 M 0.937 PE 100 100 native 50.3 M 0.0 M 38.5 M 0.627 0.77 0.77 4.19 225 1.04 3.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/19100e97-88eb-4fe9-88cf-f2ad7603cbf3/@@download/cross_correlation_plot/ENCFF259GQAENCFF837MIV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB780OJF michael-snyder:L-3065 "ENCFF837MIV,ENCFF259GQA" HiSeq 4000 2016-09-16T03:23:37.413351+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyP980369JP9931xpgPYxv ENCSR658AGP https://www.encodeproject.org/experiments/ENCSR658AGP control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF796JTX https://www.encodeproject.org/files/ENCFF796JTX/@@download/ENCFF796JTX.bam ENCFF584IGM https://www.encodeproject.org/files/ENCFF584IGM/@@download/ENCFF584IGM.bam 55.0 M 0 54.0 M 0.983 PE 100 100 native 23.9 M 0.0 M 20.9 M 0.759 0.89 0.89 8.77 210 1.07 4.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c66b8f7-e53a-4b57-b64b-91cce1c5a24e/@@download/cross_correlation_plot/ENCFF410PHDENCFF368UOC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB140WNS michael-snyder:L-2117 "ENCFF368UOC,ENCFF410PHD" HiSeq 2000 2016-10-27T22:20:49.949156+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bq4803695YX1xgJBKFkq3 ENCSR658AGP https://www.encodeproject.org/experiments/ENCSR658AGP control Control-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF720AUK https://www.encodeproject.org/files/ENCFF720AUK/@@download/ENCFF720AUK.bam ENCFF997PGK https://www.encodeproject.org/files/ENCFF997PGK/@@download/ENCFF997PGK.bam 75.0 M 0 73.8 M 0.984 PE 100 100 native 32.5 M 0.0 M 30.5 M 0.813 0.95 0.95 19.80 205 1.06 5.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4343495-ea56-4c02-8f9a-db33253e27f1/@@download/cross_correlation_plot/ENCFF240DTEENCFF608MDV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB066PQJ michael-snyder:L-2118 "ENCFF240DTE,ENCFF608MDV" HiSeq 2000 2016-10-27T22:22:17.119221+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bq7j036923z1QYVBPp83Q ENCSR667RDX https://www.encodeproject.org/experiments/ENCSR667RDX control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF102ZZG https://www.encodeproject.org/files/ENCFF102ZZG/@@download/ENCFF102ZZG.bam ENCFF073ZQP https://www.encodeproject.org/files/ENCFF073ZQP/@@download/ENCFF073ZQP.bam 27.0 M 0 26.6 M 0.983 PE 100 100 None 11.7 M 0.0 M 11.5 M 0.850 0.99 0.99 124.75 190 1.16 7.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/f728494e-5cbb-405b-920f-847bc6a766c1/@@download/cross_correlation_plot/ENCFF487HZMENCFF510RBZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB862KDB michael-snyder:L-2531 "ENCFF487HZM,ENCFF510RBZ" HiSeq 2000 2016-05-06T18:08:46.957428+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqVyQ0369GkFPvq42zg1kX ENCSR709DHP https://www.encodeproject.org/experiments/ENCSR709DHP control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF647SZO https://www.encodeproject.org/files/ENCFF647SZO/@@download/ENCFF647SZO.bam ENCFF208ONE https://www.encodeproject.org/files/ENCFF208ONE/@@download/ENCFF208ONE.bam 57.3 M 0 56.2 M 0.981 PE 100 100 None 24.3 M 0.0 M 22.7 M 0.793 0.95 0.94 18.01 200 1.08 5.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/8115d7ae-78f7-4d45-bd7e-8d30180d6e25/@@download/cross_correlation_plot/ENCFF614IRSENCFF817GNU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB693HUO michael-snyder:L-2561 "ENCFF614IRS,ENCFF817GNU" HiSeq 2000 2016-05-06T18:11:05.666609+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqXQ803690j2jgp42pQ33Y ENCSR724HDV https://www.encodeproject.org/experiments/ENCSR724HDV control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF647OZY https://www.encodeproject.org/files/ENCFF647OZY/@@download/ENCFF647OZY.bam ENCFF846RGV https://www.encodeproject.org/files/ENCFF846RGV/@@download/ENCFF846RGV.bam 72.3 M 0 70.4 M 0.974 PE 100 None 29.7 M 0.0 M 28.6 M 0.791 0.97 0.97 38.85 195 1.07 3.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/d70f7139-a1a7-4e28-bb87-bf9c025def51/@@download/cross_correlation_plot/ENCFF795ITHENCFF729LDU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB106RCN michael-snyder:L-2543 "ENCFF795ITH,ENCFF729LDU" HiSeq 2000 2016-05-06T18:15:24.509759+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqY400369PPK4xgv2b79PQ ENCSR727UQK https://www.encodeproject.org/experiments/ENCSR727UQK control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF547QCM https://www.encodeproject.org/files/ENCFF547QCM/@@download/ENCFF547QCM.bam ENCFF330VDK https://www.encodeproject.org/files/ENCFF330VDK/@@download/ENCFF330VDK.bam 82.4 M 0 79.1 M 0.960 PE 100 100 None 32.8 M 0.0 M 31.2 M 0.758 0.97 0.97 37.17 195 1.07 5.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab997bd7-94fb-4a28-9563-05b38f06f527/@@download/cross_correlation_plot/ENCFF345KINENCFF211RBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB341QQP michael-snyder:L-2466 "ENCFF211RBV,ENCFF345KIN" HiSeq 2000 2016-05-06T18:16:09.966161+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqY5j0369PPK4xgv2b79Pk ENCSR776RXA https://www.encodeproject.org/experiments/ENCSR776RXA control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF448DJP https://www.encodeproject.org/files/ENCFF448DJP/@@download/ENCFF448DJP.bam ENCFF299CFZ https://www.encodeproject.org/files/ENCFF299CFZ/@@download/ENCFF299CFZ.bam 47.4 M 0 45.9 M 0.968 PE 100 100 native 18.5 M 0.0 M 17.6 M 0.740 0.96 0.96 23.22 400 1.05 3.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b18ffc4-3b86-453f-80e6-0d17e2ce4bab/@@download/cross_correlation_plot/ENCFF096LLUENCFF026HSI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB868ABL peggy-farnham:POLR2H-INPUT-library "ENCFF026HSI,ENCFF096LLU" HiSeq 2000 2016-10-29T18:06:40.793258+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xz5j0jv1V3377YJjkvQ6y ENCSR781GAA https://www.encodeproject.org/experiments/ENCSR781GAA control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF059OPC https://www.encodeproject.org/files/ENCFF059OPC/@@download/ENCFF059OPC.bam ENCFF968WGN https://www.encodeproject.org/files/ENCFF968WGN/@@download/ENCFF968WGN.bam 80.4 M 0 79.3 M 0.986 PE 100 100 None 35.5 M 0.0 M 29.2 M 0.726 0.83 0.82 5.46 220 1.07 5.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/73977743-d286-43b2-bd52-30df289a0ee4/@@download/cross_correlation_plot/ENCFF622ATIENCFF114DVM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB356AAP michael-snyder:L-2428 "ENCFF114DVM,ENCFF622ATI" HiSeq 2000 2016-05-06T18:10:32.402566+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqZqj0369PPK4xgv2b79VB ENCSR805ITZ https://www.encodeproject.org/experiments/ENCSR805ITZ control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF441HVC https://www.encodeproject.org/files/ENCFF441HVC/@@download/ENCFF441HVC.bam ENCFF626HOS https://www.encodeproject.org/files/ENCFF626HOS/@@download/ENCFF626HOS.bam 28.2 M 0 27.7 M 0.983 PE 100 None 12.2 M 0.0 M 12.0 M 0.853 0.99 0.99 117.25 175 1.17 7.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/267ee2a8-602f-405b-a97b-97e5208dcd2c/@@download/cross_correlation_plot/ENCFF096CKYENCFF849TLD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB766EJE michael-snyder:L-2532 "ENCFF849TLD,ENCFF096CKY" HiSeq 2000 2016-05-06T18:04:49.127423+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqbb00369PPK4xgv2b79XP ENCSR889QUI https://www.encodeproject.org/experiments/ENCSR889QUI control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF779PRW https://www.encodeproject.org/files/ENCFF779PRW/@@download/ENCFF779PRW.bam ENCFF498EYF https://www.encodeproject.org/files/ENCFF498EYF/@@download/ENCFF498EYF.bam 72.9 M 0 72.0 M 0.987 PE 100 100 None 32.0 M 0.0 M 28.8 M 0.790 0.91 0.91 10.39 250 1.06 7.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/50820e2a-6c30-4254-af19-9b2e4aa45d55/@@download/cross_correlation_plot/ENCFF168MSTENCFF962SMK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB443RVW michael-snyder:L-2404 "ENCFF962SMK,ENCFF168MST" HiSeq 2000 2016-05-06T18:08:46.199296+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqgq8036929FJGg42Xq298 ENCSR910NJG https://www.encodeproject.org/experiments/ENCSR910NJG control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF350IRK https://www.encodeproject.org/files/ENCFF350IRK/@@download/ENCFF350IRK.bam ENCFF500BKR https://www.encodeproject.org/files/ENCFF500BKR/@@download/ENCFF500BKR.bam 61.2 M 0 59.1 M 0.966 PE 100 100 native 23.9 M 0.0 M 23.4 M 0.764 0.98 0.98 51.20 225 1.06 4.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7f1875f-e62e-4092-b0f0-b99ccd419c83/@@download/cross_correlation_plot/ENCFF203GDEENCFF671HJP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB281PIG peggy-farnham:NFE2L1-INPUT-library "ENCFF671HJP,ENCFF203GDE" HiSeq 2000 2016-10-29T18:07:58.944038+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xz0Q0jv1pgF5f15PFG1ZP ENCSR922MYB https://www.encodeproject.org/experiments/ENCSR922MYB control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF172LMI https://www.encodeproject.org/files/ENCFF172LMI/@@download/ENCFF172LMI.bam ENCFF180NRS https://www.encodeproject.org/files/ENCFF180NRS/@@download/ENCFF180NRS.bam 73.0 M 0 70.2 M 0.961 PE 100 100 None 29.3 M 0.0 M 28.5 M 0.781 0.98 0.98 61.01 190 1.08 6.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d548fee-23dd-4e4a-bfe5-c81f5380a968/@@download/cross_correlation_plot/ENCFF563YDIENCFF527UFN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB838IQJ michael-snyder:L-2467 "ENCFF563YDI,ENCFF527UFN" HiSeq 2000 2016-05-06T18:10:22.959690+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqjkQ0369PPK4xgv2b79fk ENCSR962GNR https://www.encodeproject.org/experiments/ENCSR962GNR control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF936BLQ https://www.encodeproject.org/files/ENCFF936BLQ/@@download/ENCFF936BLQ.bam ENCFF911DUX https://www.encodeproject.org/files/ENCFF911DUX/@@download/ENCFF911DUX.bam 78.9 M 0 77.9 M 0.987 PE 100 100 None 34.7 M 0.0 M 31.5 M 0.798 0.91 0.91 11.04 175 1.07 8.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e1c11fb-5fba-4b3e-ae78-5aceb1fe1d9a/@@download/cross_correlation_plot/ENCFF697PWIENCFF486HGM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB639AYO michael-snyder:L-2394 "ENCFF697PWI,ENCFF486HGM" HiSeq 2000 2016-05-06T18:09:55.903674+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqkJ0036961GyjjQ2QP8yj ENCSR978IXJ https://www.encodeproject.org/experiments/ENCSR978IXJ control Control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF423TQJ https://www.encodeproject.org/files/ENCFF423TQJ/@@download/ENCFF423TQJ.bam ENCFF200PJM https://www.encodeproject.org/files/ENCFF200PJM/@@download/ENCFF200PJM.bam 60.1 M 0 58.9 M 0.980 PE 100 100 None 25.3 M 0.0 M 23.9 M 0.795 0.98 0.98 43.42 200 1.08 3.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/2edbe4ca-7c3e-49de-8625-35895c9d0810/@@download/cross_correlation_plot/ENCFF467ZVSENCFF969JRS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB249RSO michael-snyder:L-2513 "ENCFF969JRS,ENCFF467ZVS" HiSeq 2000 2016-05-06T17:33:38.145763+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqkkQ03691Q4QQpZ2q8F06 ENCSR130HEG https://www.encodeproject.org/experiments/ENCSR130HEG transcription factor COPS2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF307UCL https://www.encodeproject.org/files/ENCFF307UCL/@@download/ENCFF307UCL.bam ENCFF747VXT https://www.encodeproject.org/files/ENCFF747VXT/@@download/ENCFF747VXT.bam 127.7 M 0 123.0 M 0.963 PE 100 100 native 52.8 M 0.0 M 41.4 M 0.648 0.79 0.78 4.48 210 1.04 4.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/bafb9db1-e93b-4b30-b800-6b8f20e1bc4f/@@download/cross_correlation_plot/ENCFF610FSQENCFF064WKY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB481LNJ michael-snyder:L-2801 "ENCFF064WKY,ENCFF610FSQ" HiSeq 4000 2016-09-16T03:23:13.598960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyg380369J6bkz8ZJ7qyGp ENCSR130HEG https://www.encodeproject.org/experiments/ENCSR130HEG transcription factor COPS2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF423MBY https://www.encodeproject.org/files/ENCFF423MBY/@@download/ENCFF423MBY.bam ENCFF716BSA https://www.encodeproject.org/files/ENCFF716BSA/@@download/ENCFF716BSA.bam 92.4 M 0 89.4 M 0.968 PE 100 100 native 38.7 M 0.0 M 28.1 M 0.608 0.73 0.72 3.59 225 1.05 5.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/73baf0b9-9ed7-4b7e-8eec-90269995f563/@@download/cross_correlation_plot/ENCFF257UIVENCFF042QKO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB229IMX michael-snyder:L-2802 "ENCFF042QKO,ENCFF257UIV" HiSeq 4000 2016-09-16T03:20:26.265998+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyg7003696x9VJV48y49yf ENCSR109YGM https://www.encodeproject.org/experiments/ENCSR109YGM transcription factor CREB3L1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF405YCF https://www.encodeproject.org/files/ENCFF405YCF/@@download/ENCFF405YCF.bam ENCFF465XCK https://www.encodeproject.org/files/ENCFF465XCK/@@download/ENCFF465XCK.bam 56.3 M 0 52.9 M 0.939 PE 100 100 native 23.8 M 0.0 M 18.2 M 0.646 0.77 0.76 3.98 220 1.11 4.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/b88c2742-5e54-4456-abbf-de0ca8e5e619/@@download/cross_correlation_plot/ENCFF002EINENCFF002EIS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB488XXX michael-snyder:809_B_TruSeq_ATCACG "ENCFF002EIS,ENCFF002EIN" HiSeq 2000 2016-10-29T18:04:33.703540+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B253Q0jv1xYX7855VG0J9y ENCSR109YGM https://www.encodeproject.org/experiments/ENCSR109YGM transcription factor CREB3L1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF358SSM https://www.encodeproject.org/files/ENCFF358SSM/@@download/ENCFF358SSM.bam ENCFF926PJS https://www.encodeproject.org/files/ENCFF926PJS/@@download/ENCFF926PJS.bam 57.8 M 0 55.0 M 0.952 PE 100 100 native 24.7 M 0.0 M 19.3 M 0.667 0.78 0.78 4.33 240 1.18 2.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/466cf858-1179-4c3d-b65d-f03d2065822a/@@download/cross_correlation_plot/ENCFF002EITENCFF002EIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB300HOB michael-snyder:809_B_TruSeq_CGATGT "ENCFF002EIQ,ENCFF002EIT" HiSeq 2000 2016-10-29T18:03:34.708070+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B256Q0jv1vZv5fZ4xvzGxp ENCSR402XII https://www.encodeproject.org/experiments/ENCSR402XII RNA binding protein CSDE1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF515NUR https://www.encodeproject.org/files/ENCFF515NUR/@@download/ENCFF515NUR.bam ENCFF569VJP https://www.encodeproject.org/files/ENCFF569VJP/@@download/ENCFF569VJP.bam 121.1 M 0 117.5 M 0.970 PE 100 100 native 51.0 M 0.0 M 45.9 M 0.758 0.90 0.90 9.87 225 1.05 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/969a7ffc-4152-4068-a80f-57f80eb886b5/@@download/cross_correlation_plot/ENCFF940EGQENCFF255NDV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB922NZS michael-snyder:L-1796 "ENCFF940EGQ,ENCFF255NDV" HiSeq 4000 2016-09-16T03:21:10.509150+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypP0036945x1X1GjJQQ0X ENCSR402XII https://www.encodeproject.org/experiments/ENCSR402XII RNA binding protein CSDE1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF993QLY https://www.encodeproject.org/files/ENCFF993QLY/@@download/ENCFF993QLY.bam ENCFF049HMA https://www.encodeproject.org/files/ENCFF049HMA/@@download/ENCFF049HMA.bam 86.9 M 0 84.4 M 0.971 PE 100 100 native 36.7 M 0.0 M 31.0 M 0.713 0.84 0.84 6.25 215 1.07 2.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4cd2f79-e1cc-4616-a109-4c54767b5683/@@download/cross_correlation_plot/ENCFF265YIHENCFF213FVU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB279IWB michael-snyder:L-1797 "ENCFF213FVU,ENCFF265YIH" HiSeq 4000 2016-09-16T03:19:35.581371+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypVj0369GX4Qp1Gv142PX ENCSR626QJQ https://www.encodeproject.org/experiments/ENCSR626QJQ RNA binding protein CSDE1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF746ASI https://www.encodeproject.org/files/ENCFF746ASI/@@download/ENCFF746ASI.bam ENCFF701MUQ https://www.encodeproject.org/files/ENCFF701MUQ/@@download/ENCFF701MUQ.bam 59.1 M 0 58.0 M 0.981 PE 100 100 native 25.6 M 0.0 M 24.2 M 0.818 0.94 0.94 17.84 205 1.06 5.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/d72b2605-2945-42cf-94c2-532fcc3f3061/@@download/cross_correlation_plot/ENCFF083CSAENCFF042ZPU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB857BOS michael-snyder:L-1843 "ENCFF083CSA,ENCFF042ZPU" HiSeq 2000 2016-10-09T17:13:49.461609+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vZQ0jv1XvFGkBjjfjQ25 ENCSR626QJQ https://www.encodeproject.org/experiments/ENCSR626QJQ RNA binding protein CSDE1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF864RNL https://www.encodeproject.org/files/ENCFF864RNL/@@download/ENCFF864RNL.bam ENCFF992YGA https://www.encodeproject.org/files/ENCFF992YGA/@@download/ENCFF992YGA.bam 57.9 M 0 56.9 M 0.982 PE 100 100 native 25.1 M 0.0 M 24.1 M 0.833 0.96 0.96 25.58 205 1.06 5.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/319522d0-d5c0-4971-b68f-019f954c7e2f/@@download/cross_correlation_plot/ENCFF270QZWENCFF910CUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB814QOY michael-snyder:L-1844 "ENCFF910CUI,ENCFF270QZW" HiSeq 2000 2016-10-09T17:13:54.282565+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vf00jv1xPyfX78Yz4gYq ENCSR201NQZ https://www.encodeproject.org/experiments/ENCSR201NQZ "transcription factor,chromatin remodeller" CTBP1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF809OVE https://www.encodeproject.org/files/ENCFF809OVE/@@download/ENCFF809OVE.bam ENCFF646WCS https://www.encodeproject.org/files/ENCFF646WCS/@@download/ENCFF646WCS.bam 79.8 M 0 74.8 M 0.937 PE 100 100 native 33.1 M 0.0 M 31.9 M 0.800 0.97 0.97 29.29 230 1.19 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/248d9dde-96c7-41a6-a025-d63c018d4ea3/@@download/cross_correlation_plot/ENCFF829YQDENCFF077DIB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB774PTZ michael-snyder:L-348 "ENCFF829YQD,ENCFF077DIB" HiSeq 2000 2016-10-27T22:34:01.709791+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bb0j0369PQyG3V5B45017 ENCSR201NQZ https://www.encodeproject.org/experiments/ENCSR201NQZ "transcription factor,chromatin remodeller" CTBP1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF331BYU https://www.encodeproject.org/files/ENCFF331BYU/@@download/ENCFF331BYU.bam ENCFF576WJI https://www.encodeproject.org/files/ENCFF576WJI/@@download/ENCFF576WJI.bam 77.4 M 0 75.9 M 0.981 PE 100 100 native 34.3 M 0.0 M 32.6 M 0.843 0.95 0.95 20.99 190 1.10 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/d36bdf75-d53e-4d66-b3b1-6c39219173f4/@@download/cross_correlation_plot/ENCFF034WZZENCFF350AMO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB493DRJ michael-snyder:L-418 "ENCFF350AMO,ENCFF034WZZ" HiSeq 2000 2016-10-27T22:31:04.632258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bb4803697KPkyX9BPQF1k ENCSR000EGM https://www.encodeproject.org/experiments/ENCSR000EGM "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF198CVB https://www.encodeproject.org/files/ENCFF198CVB/@@download/ENCFF198CVB.bam ENCFF442SVG https://www.encodeproject.org/files/ENCFF442SVG/@@download/ENCFF442SVG.bam 33.9 M 0 33.1 M 0.977 SE 36 36 None 0.0 M 26.1 M 22.0 M 0.648 0.85 0.87 8.16 110 2.06 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/66defdbe-963b-4ac9-9e1b-cd22edc565c5/@@download/cross_correlation_plot/ENCFF000YLW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIN ENCFF000YLW Illumina Genome Analyzer 2016-07-28T00:32:26.666542+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYb3Q03695kFGBYkGK8p9q ENCSR000EGM https://www.encodeproject.org/experiments/ENCSR000EGM "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF488CXC https://www.encodeproject.org/files/ENCFF488CXC/@@download/ENCFF488CXC.bam ENCFF650KWF https://www.encodeproject.org/files/ENCFF650KWF/@@download/ENCFF650KWF.bam 33.1 M 0 32.5 M 0.983 SE 36 36 None 0.0 M 25.5 M 22.6 M 0.682 0.89 0.90 11.18 115 1.72 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce784fda-1397-43d1-abd2-738a67b557be/@@download/cross_correlation_plot/ENCFF000YLY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVT ENCFF000YLY Illumina Genome Analyzer 2016-07-28T00:32:45.366029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYb5Q03697GbqkgJGPb7pK ENCSR000EFO https://www.encodeproject.org/experiments/ENCSR000EFO transcription factor CUX1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF482CMU https://www.encodeproject.org/files/ENCFF482CMU/@@download/ENCFF482CMU.bam ENCFF578UPA https://www.encodeproject.org/files/ENCFF578UPA/@@download/ENCFF578UPA.bam 36.9 M 0 35.6 M 0.965 SE 36 36 native 0.0 M 27.1 M 26.1 M 0.706 0.96 0.96 26.23 110 1.03 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/685721e2-90f4-4131-8dbf-f77da62a216d/@@download/cross_correlation_plot/ENCFF000YHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APU ENCFF000YHM Illumina Genome Analyzer 2016-12-11T03:57:06.496599+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164jgQ0369KbxV61z4GFvJP ENCSR000EFO https://www.encodeproject.org/experiments/ENCSR000EFO transcription factor CUX1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF662BBY https://www.encodeproject.org/files/ENCFF662BBY/@@download/ENCFF662BBY.bam ENCFF151VAM https://www.encodeproject.org/files/ENCFF151VAM/@@download/ENCFF151VAM.bam 35.7 M 0 34.9 M 0.980 SE 36 36 native 0.0 M 26.5 M 24.8 M 0.695 0.94 0.94 16.16 115 1.04 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8e10299-3504-4717-ab78-55b2b5ca289a/@@download/cross_correlation_plot/ENCFF000YHO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJR ENCFF000YHO Illumina Genome Analyzer 2016-12-11T03:57:08.559165+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164jv80369KbxV61z4GFvJq ENCSR446LAV https://www.encodeproject.org/experiments/ENCSR446LAV "RNA binding protein,transcription factor" DDX20-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF562ATM https://www.encodeproject.org/files/ENCFF562ATM/@@download/ENCFF562ATM.bam ENCFF522QSE https://www.encodeproject.org/files/ENCFF522QSE/@@download/ENCFF522QSE.bam 46.9 M 0 45.6 M 0.973 PE 100 100 native 20.0 M 0.0 M 17.2 M 0.735 0.86 0.86 7.08 220 1.20 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc2cacbf-dd43-4f36-b726-be53c8f2ae37/@@download/cross_correlation_plot/ENCFF771DFRENCFF931EDX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB692OES michael-snyder:L-187 "ENCFF771DFR,ENCFF931EDX" HiSeq 2000 2016-10-09T17:11:13.150294+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gf00jv1zBYbxYJ5zzyvX ENCSR446LAV https://www.encodeproject.org/experiments/ENCSR446LAV "RNA binding protein,transcription factor" DDX20-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF546ZLD https://www.encodeproject.org/files/ENCFF546ZLD/@@download/ENCFF546ZLD.bam ENCFF256ZQB https://www.encodeproject.org/files/ENCFF256ZQB/@@download/ENCFF256ZQB.bam 54.8 M 0 53.7 M 0.979 PE 100 100 native 23.6 M 0.0 M 18.0 M 0.656 0.76 0.76 4.09 200 1.21 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/e023060a-9906-46cd-83a1-8385c00f531c/@@download/cross_correlation_plot/ENCFF881HGOENCFF071FDG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB712CAM michael-snyder:L-188 "ENCFF071FDG,ENCFF881HGO" HiSeq 2000 2016-10-09T17:11:22.854889+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3ggQ0jv1vY92b0GYjVFKy ENCSR987PBI https://www.encodeproject.org/experiments/ENCSR987PBI "transcription factor,RNA binding protein" DNMT1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF573OTF https://www.encodeproject.org/files/ENCFF573OTF/@@download/ENCFF573OTF.bam ENCFF022XSP https://www.encodeproject.org/files/ENCFF022XSP/@@download/ENCFF022XSP.bam 53.5 M 0 52.5 M 0.981 PE 100 100 native 23.3 M 0.0 M 20.5 M 0.767 0.88 0.88 8.17 210 1.08 4.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bc4d2e6-aa6c-4327-a6d1-c7fdbec5c8ea/@@download/cross_correlation_plot/ENCFF126MZPENCFF553GOC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB111IXN michael-snyder:L-2105 "ENCFF553GOC,ENCFF126MZP" HiSeq 2000 2016-10-09T17:02:29.917896+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Fk00jv1f60PxyZ9JGPFj ENCSR987PBI https://www.encodeproject.org/experiments/ENCSR987PBI "transcription factor,RNA binding protein" DNMT1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF378UVV https://www.encodeproject.org/files/ENCFF378UVV/@@download/ENCFF378UVV.bam ENCFF273UPH https://www.encodeproject.org/files/ENCFF273UPH/@@download/ENCFF273UPH.bam 68.7 M 0 67.8 M 0.987 PE 100 100 native 30.1 M 0.0 M 28.3 M 0.824 0.94 0.94 16.81 200 1.06 5.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab77f0e7-9448-4d8f-b9e7-18b4dda63fab/@@download/cross_correlation_plot/ENCFF436CBCENCFF306GVI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB946ZIV michael-snyder:L-2106 "ENCFF436CBC,ENCFF306GVI" HiSeq 2000 2016-10-09T17:04:12.930221+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Fpj0jv1g5yGjfvVx0P69 ENCSR219BXP https://www.encodeproject.org/experiments/ENCSR219BXP transcription factor DPF2-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR715CCR https://www.encodeproject.org/experiments/ENCSR715CCR transcription factor DPF2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF990RGE https://www.encodeproject.org/files/ENCFF990RGE/@@download/ENCFF990RGE.bam ENCFF558VZG https://www.encodeproject.org/files/ENCFF558VZG/@@download/ENCFF558VZG.bam 56.1 M 0 54.9 M 0.978 PE 100 100 native 24.1 M 0.0 M 22.5 M 0.804 0.94 0.94 15.59 205 1.31 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/7dee2170-db8c-424c-bbe7-f289b282c08b/@@download/cross_correlation_plot/ENCFF579BJGENCFF031JCO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB708CTN michael-snyder:L-227 "ENCFF579BJG,ENCFF031JCO" HiSeq 2000 2016-10-09T17:03:54.902137+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44J00jv1zBYbxYJ5zzz9B ENCSR715CCR https://www.encodeproject.org/experiments/ENCSR715CCR transcription factor DPF2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF205JWI https://www.encodeproject.org/files/ENCFF205JWI/@@download/ENCFF205JWI.bam ENCFF769IXF https://www.encodeproject.org/files/ENCFF769IXF/@@download/ENCFF769IXF.bam 58.7 M 0 57.1 M 0.973 PE 100 100 native 24.7 M 0.0 M 23.8 M 0.810 0.96 0.96 27.86 200 1.24 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c8ae122-d526-44b7-abf5-a5032f441f87/@@download/cross_correlation_plot/ENCFF389HJOENCFF290HFY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB882FCY michael-snyder:L-228 "ENCFF389HJO,ENCFF290HFY" HiSeq 2000 2016-10-09T17:03:59.134350+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44Kj0jv1XvFGkBjjfjQBX ENCSR563LLO https://www.encodeproject.org/experiments/ENCSR563LLO transcription factor E2F1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF846CYU https://www.encodeproject.org/files/ENCFF846CYU/@@download/ENCFF846CYU.bam ENCFF606KRZ https://www.encodeproject.org/files/ENCFF606KRZ/@@download/ENCFF606KRZ.bam 37.0 M 0 36.1 M 0.976 PE 100 100 native 15.8 M 0.0 M 12.7 M 0.687 0.81 0.81 5.15 235 1.15 3.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/ded9b39b-2221-4762-885b-53bd21664a7b/@@download/cross_correlation_plot/ENCFF749JUGENCFF942QFN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB809EWT michael-snyder:L-1718 "ENCFF942QFN,ENCFF749JUG" HiSeq 2000 2017-01-26T00:26:29.813619+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K93803698k8BZGpKx02x6 ENCSR563LLO https://www.encodeproject.org/experiments/ENCSR563LLO transcription factor E2F1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF226KOW https://www.encodeproject.org/files/ENCFF226KOW/@@download/ENCFF226KOW.bam ENCFF757DMU https://www.encodeproject.org/files/ENCFF757DMU/@@download/ENCFF757DMU.bam 54.1 M 0 53.1 M 0.981 PE 100 100 native 23.2 M 0.0 M 19.6 M 0.726 0.85 0.84 6.28 230 1.12 2.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/216da630-4f00-4972-baef-1882636bd42e/@@download/cross_correlation_plot/ENCFF907JIEENCFF399CCC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB250QWI michael-snyder:L-1719 "ENCFF399CCC,ENCFF907JIE" HiSeq 2000 2017-01-26T00:25:26.947011+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9fQ036937yFgPVXB72q4 ENCSR171CAY https://www.encodeproject.org/experiments/ENCSR171CAY transcription factor E2F7-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF104VVO https://www.encodeproject.org/files/ENCFF104VVO/@@download/ENCFF104VVO.bam ENCFF884LNX https://www.encodeproject.org/files/ENCFF884LNX/@@download/ENCFF884LNX.bam 56.6 M 0 50.8 M 0.897 PE 100 100 native 21.9 M 0.0 M 19.5 M 0.688 0.89 0.89 8.85 190 1.10 3.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/81473525-73f6-4251-b8fd-5e424612d0ec/@@download/cross_correlation_plot/ENCFF928ZASENCFF971CJJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB673VPK michael-snyder:L-2937 "ENCFF928ZAS,ENCFF971CJJ" HiSeq 2000 2017-02-22T05:23:27.149077+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Yq803699xZQ11gXX3YQj ENCSR171CAY https://www.encodeproject.org/experiments/ENCSR171CAY transcription factor E2F7-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF246CLD https://www.encodeproject.org/files/ENCFF246CLD/@@download/ENCFF246CLD.bam ENCFF930PEE https://www.encodeproject.org/files/ENCFF930PEE/@@download/ENCFF930PEE.bam 56.8 M 0 50.9 M 0.896 PE 100 100 native 22.0 M 0.0 M 16.6 M 0.586 0.76 0.76 4.02 195 1.12 3.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7f59679-f162-4e71-aedd-72acf894d803/@@download/cross_correlation_plot/ENCFF124KEVENCFF584BPF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB499FII michael-snyder:L-2938 "ENCFF124KEV,ENCFF584BPF" HiSeq 2000 2017-02-22T05:23:32.982215+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Yz803699xZQ11gXX3YV0 ENCSR091GVJ https://www.encodeproject.org/experiments/ENCSR091GVJ "recombinant protein,transcription factor" eGFP-ATF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF892LAS https://www.encodeproject.org/files/ENCFF892LAS/@@download/ENCFF892LAS.bam ENCFF954ERL https://www.encodeproject.org/files/ENCFF954ERL/@@download/ENCFF954ERL.bam 73.6 M 0 72.9 M 0.989 PE 100 100 native 32.6 M 0.0 M 30.2 M 0.819 0.93 0.93 13.43 300 1.41 2.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7198b24-eb43-44b4-b4ae-e4efe4567bb9/@@download/cross_correlation_plot/ENCFF018HQRENCFF016FNK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB730PMZ michael-snyder:L-2430 "ENCFF016FNK,ENCFF018HQR" HiSeq 2000 2016-10-09T17:37:13.626761+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv63jj0jv1f6Kg8jbGjKZJ4 ENCSR091GVJ https://www.encodeproject.org/experiments/ENCSR091GVJ "recombinant protein,transcription factor" eGFP-ATF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF774RUP https://www.encodeproject.org/files/ENCFF774RUP/@@download/ENCFF774RUP.bam ENCFF878XMR https://www.encodeproject.org/files/ENCFF878XMR/@@download/ENCFF878XMR.bam 64.7 M 0 63.9 M 0.989 PE 100 100 native 28.6 M 0.0 M 25.8 M 0.799 0.90 0.90 10.16 330 1.40 2.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd8a3007-4968-49f4-b1b7-722ffbfd44dc/@@download/cross_correlation_plot/ENCFF693JKIENCFF109NTO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB608TSI michael-snyder:L-2431 "ENCFF693JKI,ENCFF109NTO" HiSeq 2000 2016-10-09T17:31:16.264120+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv63q00jv1YvGVzF100Zf7g ENCSR632DCH https://www.encodeproject.org/experiments/ENCSR632DCH "recombinant protein,transcription factor" eGFP-ATF3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF327XSI https://www.encodeproject.org/files/ENCFF327XSI/@@download/ENCFF327XSI.bam ENCFF631UIG https://www.encodeproject.org/files/ENCFF631UIG/@@download/ENCFF631UIG.bam 91.6 M 0 90.3 M 0.985 PE 100 100 native 39.7 M 0.0 M 22.2 M 0.485 0.59 0.57 2.19 300 1.42 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/af7c71b1-e54a-4f0b-90b0-4fbfa3d02b2f/@@download/cross_correlation_plot/ENCFF647KQTENCFF311SGU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB789MHG peggy-farnham:ATF3-Rep1-library "ENCFF311SGU,ENCFF647KQT" HiSeq 2000 2016-10-09T17:13:09.387473+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jbj0jv1vY92b0GYjVFPz ENCSR632DCH https://www.encodeproject.org/experiments/ENCSR632DCH "recombinant protein,transcription factor" eGFP-ATF3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF938FQC https://www.encodeproject.org/files/ENCFF938FQC/@@download/ENCFF938FQC.bam ENCFF192UGS https://www.encodeproject.org/files/ENCFF192UGS/@@download/ENCFF192UGS.bam 57.4 M 0 56.5 M 0.985 PE 100 100 native 24.8 M 0.0 M 18.0 M 0.629 0.76 0.75 3.86 240 1.50 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/7fa74f3d-4218-4549-886c-f8e37de8da0e/@@download/cross_correlation_plot/ENCFF497JNWENCFF842CFV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB917NMY peggy-farnham:ATF3-Rep2-library "ENCFF842CFV,ENCFF497JNW" HiSeq 2000 2016-10-09T17:11:44.938484+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jg80jv1XvFGkBjjfjPyv ENCSR416QLJ https://www.encodeproject.org/experiments/ENCSR416QLJ "recombinant protein,transcription factor" eGFP-CEBPB-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF002PNZ https://www.encodeproject.org/files/ENCFF002PNZ/@@download/ENCFF002PNZ.bam ENCFF260QKA https://www.encodeproject.org/files/ENCFF260QKA/@@download/ENCFF260QKA.bam 76.0 M 0 75.0 M 0.986 PE 100 100 native 33.5 M 0.0 M 31.5 M 0.829 0.94 0.94 17.21 260 1.25 2.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/1944a829-9a53-4f1a-ae54-e0add48e28a9/@@download/cross_correlation_plot/ENCFF156EZYENCFF052XOQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB181FUM michael-snyder:L-2398 "ENCFF052XOQ,ENCFF156EZY" HiSeq 2000 2016-10-09T17:15:17.792869+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vjj0jv1zBYbxYJ5zzz1x ENCSR416QLJ https://www.encodeproject.org/experiments/ENCSR416QLJ "recombinant protein,transcription factor" eGFP-CEBPB-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF346SNT https://www.encodeproject.org/files/ENCFF346SNT/@@download/ENCFF346SNT.bam ENCFF273RLA https://www.encodeproject.org/files/ENCFF273RLA/@@download/ENCFF273RLA.bam 78.3 M 0 77.1 M 0.984 PE 100 100 native 34.4 M 0.0 M 32.4 M 0.828 0.95 0.94 18.03 260 1.29 2.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/53cd6156-2c21-4805-a18c-b242caaf503e/@@download/cross_correlation_plot/ENCFF470OUZENCFF555QJQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB764OUU michael-snyder:L-2399 "ENCFF470OUZ,ENCFF555QJQ" HiSeq 2000 2016-10-09T17:15:26.414542+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vp80jv1xPyfX78Yz4gZ6 ENCSR490LWA https://www.encodeproject.org/experiments/ENCSR490LWA "recombinant protein,transcription factor" eGFP-CEBPG-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF801LQC https://www.encodeproject.org/files/ENCFF801LQC/@@download/ENCFF801LQC.bam ENCFF703DBL https://www.encodeproject.org/files/ENCFF703DBL/@@download/ENCFF703DBL.bam 77.9 M 0 75.6 M 0.971 PE 100 100 native 31.4 M 0.0 M 29.5 M 0.759 0.94 0.94 16.99 255 1.10 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/e330736c-2461-4e5d-ae53-cc1762ffc21d/@@download/cross_correlation_plot/ENCFF496CZAENCFF028NOQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB238BOS peggy-farnham:CEBPG-Rep1-library "ENCFF496CZA,ENCFF028NOQ" HiSeq 2000 2017-04-06T20:44:03.125885+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Xq6F003698f3QVFK2gPb1k ENCSR490LWA https://www.encodeproject.org/experiments/ENCSR490LWA "recombinant protein,transcription factor" eGFP-CEBPG-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF092XPV https://www.encodeproject.org/files/ENCFF092XPV/@@download/ENCFF092XPV.bam ENCFF303IRP https://www.encodeproject.org/files/ENCFF303IRP/@@download/ENCFF303IRP.bam 95.3 M 0 91.7 M 0.961 PE 100 100 native 38.4 M 0.0 M 35.8 M 0.752 0.94 0.93 15.11 230 1.11 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/870baa9e-1888-4ddf-9f90-97add3ec065b/@@download/cross_correlation_plot/ENCFF392MVWENCFF567TRK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB366UYZ peggy-farnham:CEBPG-Rep2-library "ENCFF392MVW,ENCFF567TRK" HiSeq 2000 2017-04-06T20:47:03.187744+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Xq6K803692ZJBzFKGJ0J4b ENCSR093FKD https://www.encodeproject.org/experiments/ENCSR093FKD "recombinant protein,transcription factor" eGFP-CREB3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF334OKF https://www.encodeproject.org/files/ENCFF334OKF/@@download/ENCFF334OKF.bam ENCFF324FUU https://www.encodeproject.org/files/ENCFF324FUU/@@download/ENCFF324FUU.bam 43.4 M 0 40.3 M 0.928 PE 100 100 native 17.2 M 0.0 M 14.4 M 0.665 0.84 0.84 5.92 215 1.14 5.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/60770cd6-64de-45fa-9a13-7827fb057b2c/@@download/cross_correlation_plot/ENCFF199DADENCFF026WQA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB894ECJ michael-snyder:L-2487 "ENCFF026WQA,ENCFF199DAD" HiSeq 2000 2016-10-09T17:02:24.474549+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4FJQ0jv1f60PxyZ9JGPFK ENCSR093FKD https://www.encodeproject.org/experiments/ENCSR093FKD "recombinant protein,transcription factor" eGFP-CREB3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF294DBF https://www.encodeproject.org/files/ENCFF294DBF/@@download/ENCFF294DBF.bam ENCFF907KXX https://www.encodeproject.org/files/ENCFF907KXX/@@download/ENCFF907KXX.bam 38.4 M 0 36.3 M 0.945 PE 100 100 native 15.7 M 0.0 M 12.0 M 0.622 0.76 0.75 3.90 245 1.17 5.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6c57876-a4d5-4e5b-a683-3277bd8d752c/@@download/cross_correlation_plot/ENCFF274ZEZENCFF565JGI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB660WJW michael-snyder:L-2493 "ENCFF274ZEZ,ENCFF565JGI" HiSeq 2000 2016-10-09T17:01:40.098678+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4FP00jv1XvFGkBjjfjQY2 ENCSR382AIB https://www.encodeproject.org/experiments/ENCSR382AIB "recombinant protein,transcription factor" eGFP-DDX20-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF810IRF https://www.encodeproject.org/files/ENCFF810IRF/@@download/ENCFF810IRF.bam ENCFF756RLM https://www.encodeproject.org/files/ENCFF756RLM/@@download/ENCFF756RLM.bam 47.8 M 0 45.5 M 0.952 PE 100 100 native 19.6 M 0.0 M 15.0 M 0.626 0.77 0.77 4.22 210 1.11 4.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b6eeb4b-ba0b-4288-b7b2-756ed64f2814/@@download/cross_correlation_plot/ENCFF706WJQENCFF077SBC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB448FFW michael-snyder:L-2503 "ENCFF706WJQ,ENCFF077SBC" HiSeq 2000 2016-10-09T17:11:32.484718+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fY00jv1zBYbxYJ5zzypq ENCSR382AIB https://www.encodeproject.org/experiments/ENCSR382AIB "recombinant protein,transcription factor" eGFP-DDX20-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF760JNE https://www.encodeproject.org/files/ENCFF760JNE/@@download/ENCFF760JNE.bam ENCFF542YLK https://www.encodeproject.org/files/ENCFF542YLK/@@download/ENCFF542YLK.bam 43.0 M 0 41.7 M 0.970 PE 100 100 native 18.2 M 0.0 M 14.3 M 0.665 0.79 0.79 4.66 225 1.11 5.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/111884d6-8358-4e3f-84b0-eb1f9bddc2aa/@@download/cross_correlation_plot/ENCFF129CFJENCFF674JSK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB035HCQ michael-snyder:L-2508 "ENCFF674JSK,ENCFF129CFJ" HiSeq 2000 2016-10-09T17:12:23.284643+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3fZj0jv1QxJBfj5Zb2pF9 ENCSR167JBG https://www.encodeproject.org/experiments/ENCSR167JBG "recombinant protein,transcription factor" eGFP-DIDO1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF730MAX https://www.encodeproject.org/files/ENCFF730MAX/@@download/ENCFF730MAX.bam ENCFF518PFA https://www.encodeproject.org/files/ENCFF518PFA/@@download/ENCFF518PFA.bam 49.0 M 0 47.2 M 0.964 PE 100 100 native 20.2 M 0.0 M 18.9 M 0.772 0.94 0.94 15.29 200 1.11 3.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ae02630-de53-4a73-9162-9098f0c23b68/@@download/cross_correlation_plot/ENCFF382BWEENCFF943GMA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB326QJS michael-snyder:L-2535 "ENCFF943GMA,ENCFF382BWE" HiSeq 2000 2016-10-09T17:35:32.387947+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5yyQ0jv1QkfFX8V1vJbB6 ENCSR167JBG https://www.encodeproject.org/experiments/ENCSR167JBG "recombinant protein,transcription factor" eGFP-DIDO1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF384DMV https://www.encodeproject.org/files/ENCFF384DMV/@@download/ENCFF384DMV.bam ENCFF937GJL https://www.encodeproject.org/files/ENCFF937GJL/@@download/ENCFF937GJL.bam 45.1 M 0 42.6 M 0.945 PE 100 100 native 17.0 M 0.0 M 15.6 M 0.693 0.92 0.92 12.57 215 1.11 3.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4ca554c-a611-4081-8520-2aefd24bc4c9/@@download/cross_correlation_plot/ENCFF597HDKENCFF992IHE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB066KAL michael-snyder:L-2539 "ENCFF597HDK,ENCFF992IHE" HiSeq 2000 2016-10-09T17:35:28.168835+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5z0j0jv1QkfFX8V1vJbBP ENCSR596IKD https://www.encodeproject.org/experiments/ENCSR596IKD "recombinant protein,transcription factor" eGFP-ETS2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF950PAH https://www.encodeproject.org/files/ENCFF950PAH/@@download/ENCFF950PAH.bam ENCFF848MVQ https://www.encodeproject.org/files/ENCFF848MVQ/@@download/ENCFF848MVQ.bam 105.4 M 0 103.0 M 0.977 PE 100 100 native 45.7 M 0.0 M 22.4 M 0.425 0.49 0.44 1.56 245 1.07 10.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/9288973e-0b1c-4bf5-a36c-546ef0f8e087/@@download/cross_correlation_plot/ENCFF466RJAENCFF548XLM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB128AXH michael-snyder:L-2414 "ENCFF466RJA,ENCFF548XLM" HiSeq 2000 2016-10-09T17:07:32.406389+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49jQ0jv1XYYX2Fxk3f58G ENCSR596IKD https://www.encodeproject.org/experiments/ENCSR596IKD "recombinant protein,transcription factor" eGFP-ETS2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF535SSL https://www.encodeproject.org/files/ENCFF535SSL/@@download/ENCFF535SSL.bam ENCFF705TUS https://www.encodeproject.org/files/ENCFF705TUS/@@download/ENCFF705TUS.bam 100.1 M 0 97.9 M 0.978 PE 100 100 native 43.6 M 0.0 M 27.8 M 0.556 0.64 0.61 2.36 220 1.05 11.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/d13d2bec-f98d-4493-9f24-240bc9b40888/@@download/cross_correlation_plot/ENCFF947BPKENCFF817VCN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB796TLJ michael-snyder:L-2415 "ENCFF817VCN,ENCFF947BPK" HiSeq 2000 2016-10-09T17:07:48.809237+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49p00jv1QxJBfj5Zb2pvJ ENCSR277DMR https://www.encodeproject.org/experiments/ENCSR277DMR "recombinant protein,transcription factor" eGFP-ETV1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF670SFK https://www.encodeproject.org/files/ENCFF670SFK/@@download/ENCFF670SFK.bam ENCFF631AMI https://www.encodeproject.org/files/ENCFF631AMI/@@download/ENCFF631AMI.bam 38.9 M 0 37.5 M 0.964 PE 100 100 native 16.4 M 0.0 M 15.6 M 0.802 0.95 0.95 19.77 195 1.21 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/80e3cbb8-f246-4e32-8320-96492d97d466/@@download/cross_correlation_plot/ENCFF990FFMENCFF865UHF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB560SBO michael-snyder:L-2521 "ENCFF990FFM,ENCFF865UHF" HiSeq 2000 2016-10-09T17:13:03.862465+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jK00jv1XYYX2Fxk3f4Yv ENCSR277DMR https://www.encodeproject.org/experiments/ENCSR277DMR "recombinant protein,transcription factor" eGFP-ETV1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF656BKZ https://www.encodeproject.org/files/ENCFF656BKZ/@@download/ENCFF656BKZ.bam ENCFF743WHS https://www.encodeproject.org/files/ENCFF743WHS/@@download/ENCFF743WHS.bam 57.0 M 0 55.7 M 0.978 PE 100 100 native 24.3 M 0.0 M 23.4 M 0.822 0.97 0.97 29.91 180 1.16 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/78f7cc00-c3ff-40ae-8b7e-2567bf254494/@@download/cross_correlation_plot/ENCFF548SNSENCFF898MPN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB001EOO michael-snyder:L-2526 "ENCFF548SNS,ENCFF898MPN" HiSeq 2000 2016-10-09T17:12:54.613962+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jPQ0jv1xPyfX78Yz4gPx ENCSR801RPW https://www.encodeproject.org/experiments/ENCSR801RPW "recombinant protein,transcription factor" eGFP-GTF2A2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF438XEX https://www.encodeproject.org/files/ENCFF438XEX/@@download/ENCFF438XEX.bam ENCFF679UCS https://www.encodeproject.org/files/ENCFF679UCS/@@download/ENCFF679UCS.bam 105.0 M 0 102.6 M 0.977 PE 100 100 native 43.7 M 0.0 M 37.8 M 0.720 0.87 0.86 7.03 220 1.03 3.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/f466435f-0b13-4f7b-bcc0-d95631cc9a19/@@download/cross_correlation_plot/ENCFF677HTAENCFF339NHI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB428JWA peggy-farnham:GTF2A2-Rep1-library "ENCFF677HTA,ENCFF339NHI" HiSeq 2000 2016-10-09T17:19:29.188924+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xyQ0jv1xPyfX78Yz4gbX ENCSR801RPW https://www.encodeproject.org/experiments/ENCSR801RPW "recombinant protein,transcription factor" eGFP-GTF2A2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF709ZMI https://www.encodeproject.org/files/ENCFF709ZMI/@@download/ENCFF709ZMI.bam ENCFF302XKP https://www.encodeproject.org/files/ENCFF302XKP/@@download/ENCFF302XKP.bam 65.5 M 0 64.2 M 0.980 PE 100 100 native 27.5 M 0.0 M 25.7 M 0.783 0.93 0.93 14.89 255 1.03 6.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/faa49a9c-89d9-49fa-8d30-3ed206db3928/@@download/cross_correlation_plot/ENCFF483AVNENCFF264IWL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB086WYJ peggy-farnham:GTF2A2-Rep2-library "ENCFF264IWL,ENCFF483AVN" HiSeq 2000 2016-10-09T17:14:36.139230+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3y000jv1xPyfX78Yz4gbq ENCSR835TCD https://www.encodeproject.org/experiments/ENCSR835TCD "recombinant protein,transcription factor" eGFP-HDAC8-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF997BDJ https://www.encodeproject.org/files/ENCFF997BDJ/@@download/ENCFF997BDJ.bam ENCFF068FBW https://www.encodeproject.org/files/ENCFF068FBW/@@download/ENCFF068FBW.bam 83.2 M 0 78.1 M 0.939 PE 100 100 native 34.5 M 0.0 M 22.5 M 0.542 0.65 0.65 2.74 245 1.08 6.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/2627885a-68df-47d4-a013-a49917938876/@@download/cross_correlation_plot/ENCFF493AAYENCFF391EFO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB240SJJ michael-snyder:L-2420 "ENCFF391EFO,ENCFF493AAY" HiSeq 2000 2016-10-09T17:40:04.050362+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qfQ0jv1xFKXGVbpg0QBB ENCSR835TCD https://www.encodeproject.org/experiments/ENCSR835TCD "recombinant protein,transcription factor" eGFP-HDAC8-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF285FGV https://www.encodeproject.org/files/ENCFF285FGV/@@download/ENCFF285FGV.bam ENCFF150IJU https://www.encodeproject.org/files/ENCFF150IJU/@@download/ENCFF150IJU.bam 95.3 M 0 87.7 M 0.920 PE 100 100 native 38.7 M 0.0 M 24.5 M 0.514 0.63 0.63 2.63 255 1.08 7.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe6fcfcc-67ba-4297-bb8d-5fa41198eeea/@@download/cross_correlation_plot/ENCFF393ANWENCFF351UCM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB824ZRT michael-snyder:L-2421 "ENCFF393ANW,ENCFF351UCM" HiSeq 2000 2016-10-09T17:39:57.354512+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qjQ0jv1pBzjzVx0B7f43 ENCSR619GFP https://www.encodeproject.org/experiments/ENCSR619GFP "recombinant protein,transcription factor" eGFP-HINFP-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF448SJG https://www.encodeproject.org/files/ENCFF448SJG/@@download/ENCFF448SJG.bam ENCFF541OKB https://www.encodeproject.org/files/ENCFF541OKB/@@download/ENCFF541OKB.bam 50.3 M 0 49.2 M 0.978 PE 100 100 native 21.8 M 0.0 M 19.1 M 0.761 0.88 0.88 8.24 180 1.14 3.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7083428-c14f-425b-83ff-4bd5ce24c1f1/@@download/cross_correlation_plot/ENCFF551WWRENCFF541TDH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB011FKD michael-snyder:L-2473 "ENCFF551WWR,ENCFF541TDH" HiSeq 2000 2016-10-09T17:08:20.063858+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69180jv1XQK7ZK9053Xj9 ENCSR619GFP https://www.encodeproject.org/experiments/ENCSR619GFP "recombinant protein,transcription factor" eGFP-HINFP-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF786KLU https://www.encodeproject.org/files/ENCFF786KLU/@@download/ENCFF786KLU.bam ENCFF065IPK https://www.encodeproject.org/files/ENCFF065IPK/@@download/ENCFF065IPK.bam 47.9 M 0 47.1 M 0.983 PE 100 100 native 20.9 M 0.0 M 19.9 M 0.829 0.95 0.95 19.75 185 1.14 2.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/7076d4bd-7c7b-43be-8399-4dbe14e67728/@@download/cross_correlation_plot/ENCFF423ZOGENCFF224KMR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB540BAL michael-snyder:L-2478 "ENCFF423ZOG,ENCFF224KMR" HiSeq 2000 2016-10-09T17:08:28.232111+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv693Q0jv1QkfFX8V1vJbGX ENCSR005NMT https://www.encodeproject.org/experiments/ENCSR005NMT "recombinant protein,transcription factor" eGFP-ID3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF695GTB https://www.encodeproject.org/files/ENCFF695GTB/@@download/ENCFF695GTB.bam ENCFF197AGW https://www.encodeproject.org/files/ENCFF197AGW/@@download/ENCFF197AGW.bam 83.3 M 0 80.5 M 0.966 PE 100 100 native 35.4 M 0.0 M 29.9 M 0.718 0.85 0.85 6.53 250 1.11 3.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/00d371c7-05fc-4b71-9240-97ddd9a0d831/@@download/cross_correlation_plot/ENCFF542CMJENCFF780YRV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB842NPF michael-snyder:L-2422 "ENCFF780YRV,ENCFF542CMJ" HiSeq 2000 2016-10-09T17:17:15.314627+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bP00jv1vY92b0GYjVFGX ENCSR005NMT https://www.encodeproject.org/experiments/ENCSR005NMT "recombinant protein,transcription factor" eGFP-ID3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF115BME https://www.encodeproject.org/files/ENCFF115BME/@@download/ENCFF115BME.bam ENCFF090EWM https://www.encodeproject.org/files/ENCFF090EWM/@@download/ENCFF090EWM.bam 95.7 M 0 91.9 M 0.960 PE 100 100 native 40.3 M 0.0 M 29.6 M 0.619 0.74 0.73 3.75 265 1.09 3.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1a511fd-79af-4398-b8bb-51c993bdeb0d/@@download/cross_correlation_plot/ENCFF548RTAENCFF916QKA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB314DMO michael-snyder:L-2423 "ENCFF548RTA,ENCFF916QKA" HiSeq 2000 2016-10-09T17:23:22.800037+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bQj0jv1vY92b0GYjVFGq ENCSR648INT https://www.encodeproject.org/experiments/ENCSR648INT "recombinant protein,transcription factor" eGFP-ILK-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF145ZDW https://www.encodeproject.org/files/ENCFF145ZDW/@@download/ENCFF145ZDW.bam ENCFF751PQV https://www.encodeproject.org/files/ENCFF751PQV/@@download/ENCFF751PQV.bam 53.6 M 0 51.5 M 0.962 PE 100 100 native 22.0 M 0.0 M 18.2 M 0.681 0.83 0.83 5.64 210 1.10 4.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8e42bc5-f28a-4e4c-8507-867efad82ae7/@@download/cross_correlation_plot/ENCFF395XDNENCFF188LAZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB758UNH michael-snyder:L-2339 "ENCFF188LAZ,ENCFF395XDN" HiSeq 2000 2016-10-09T17:03:37.057134+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6QxQ0jv1vY92b0GYjVGK2 ENCSR648INT https://www.encodeproject.org/experiments/ENCSR648INT "recombinant protein,transcription factor" eGFP-ILK-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF831ODM https://www.encodeproject.org/files/ENCFF831ODM/@@download/ENCFF831ODM.bam ENCFF821DYA https://www.encodeproject.org/files/ENCFF821DYA/@@download/ENCFF821DYA.bam 81.6 M 0 78.5 M 0.962 PE 100 100 native 33.1 M 0.0 M 22.6 M 0.553 0.68 0.67 2.93 170 1.11 3.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/4308bf4d-3c59-42b0-9e33-5e3304cf0b35/@@download/cross_correlation_plot/ENCFF908PTRENCFF007IDQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB107LBU michael-snyder:L-2340 "ENCFF908PTR,ENCFF007IDQ" HiSeq 2000 2016-10-09T17:06:15.375337+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Qzj0jv1XvFGkBjjfjV1y ENCSR854MCV https://www.encodeproject.org/experiments/ENCSR854MCV "recombinant protein,transcription factor" eGFP-IRF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF701KAF https://www.encodeproject.org/files/ENCFF701KAF/@@download/ENCFF701KAF.bam ENCFF162RPJ https://www.encodeproject.org/files/ENCFF162RPJ/@@download/ENCFF162RPJ.bam 63.1 M 0 62.3 M 0.988 PE 100 100 native 27.8 M 0.0 M 23.7 M 0.751 0.85 0.85 6.53 325 1.10 4.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/b8244993-7df4-42d3-b547-d55866616e33/@@download/cross_correlation_plot/ENCFF031RWNENCFF031WIT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB534ROR michael-snyder:L-2432 "ENCFF031WIT,ENCFF031RWN" HiSeq 2000 2016-10-09T17:08:58.357885+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6BF00jv1x3KYJK9kQ04j6 ENCSR854MCV https://www.encodeproject.org/experiments/ENCSR854MCV "recombinant protein,transcription factor" eGFP-IRF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF922JWO https://www.encodeproject.org/files/ENCFF922JWO/@@download/ENCFF922JWO.bam ENCFF561XXS https://www.encodeproject.org/files/ENCFF561XXS/@@download/ENCFF561XXS.bam 59.0 M 0 58.1 M 0.985 PE 100 100 native 25.7 M 0.0 M 18.0 M 0.611 0.70 0.69 3.08 335 1.10 7.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe9c1a94-cf70-44ec-ac3f-a73e39acb6dc/@@download/cross_correlation_plot/ENCFF602NSLENCFF071PWE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB442GMR michael-snyder:L-2433 "ENCFF602NSL,ENCFF071PWE" HiSeq 2000 2016-10-09T17:08:12.211411+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6BJ80jv1fGZb9Vx2f3z3y ENCSR926KTP https://www.encodeproject.org/experiments/ENCSR926KTP "recombinant protein,transcription factor" eGFP-IRF9-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF634KQT https://www.encodeproject.org/files/ENCFF634KQT/@@download/ENCFF634KQT.bam ENCFF368NNC https://www.encodeproject.org/files/ENCFF368NNC/@@download/ENCFF368NNC.bam 61.3 M 0 60.0 M 0.978 PE 100 100 native 26.0 M 0.0 M 24.4 M 0.797 0.94 0.94 16.96 190 1.08 3.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/d3086ac0-7a71-4571-9120-ac0245091254/@@download/cross_correlation_plot/ENCFF034WFDENCFF183THJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB656SZS michael-snyder:L-2549 "ENCFF034WFD,ENCFF183THJ" HiSeq 2000 2016-10-09T17:37:37.435507+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5y600jv1z5Z5kK1VpQJJf ENCSR926KTP https://www.encodeproject.org/experiments/ENCSR926KTP "recombinant protein,transcription factor" eGFP-IRF9-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF623MQU https://www.encodeproject.org/files/ENCFF623MQU/@@download/ENCFF623MQU.bam ENCFF044WSQ https://www.encodeproject.org/files/ENCFF044WSQ/@@download/ENCFF044WSQ.bam 56.3 M 0 54.5 M 0.967 PE 100 100 native 23.2 M 0.0 M 21.7 M 0.770 0.94 0.94 15.85 200 1.08 3.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/53d771bd-07c6-4172-bf0d-a15963625ec9/@@download/cross_correlation_plot/ENCFF137GVEENCFF991EAW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB892HRZ michael-snyder:L-2555 "ENCFF991EAW,ENCFF137GVE" HiSeq 2000 2016-10-09T17:37:22.698589+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5y9Q0jv1z38xVGv104v5J ENCSR550HCT https://www.encodeproject.org/experiments/ENCSR550HCT "recombinant protein,transcription factor" eGFP-KLF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF878UKW https://www.encodeproject.org/files/ENCFF878UKW/@@download/ENCFF878UKW.bam ENCFF185DKY https://www.encodeproject.org/files/ENCFF185DKY/@@download/ENCFF185DKY.bam 74.7 M 0 73.6 M 0.986 PE 100 100 native 32.9 M 0.0 M 30.1 M 0.807 0.92 0.92 11.68 235 1.06 7.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/4aee8ce1-b317-4d1b-b8d9-492fae618f46/@@download/cross_correlation_plot/ENCFF942FDDENCFF807OLO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB606PCO michael-snyder:L-2407 "ENCFF942FDD,ENCFF807OLO" HiSeq 2000 2016-10-09T17:14:11.439818+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gK00jv1XvFGkBjjfjPxQ ENCSR550HCT https://www.encodeproject.org/experiments/ENCSR550HCT "recombinant protein,transcription factor" eGFP-KLF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF378QWS https://www.encodeproject.org/files/ENCFF378QWS/@@download/ENCFF378QWS.bam ENCFF099BYY https://www.encodeproject.org/files/ENCFF099BYY/@@download/ENCFF099BYY.bam 75.5 M 0 74.2 M 0.983 PE 100 100 native 33.0 M 0.0 M 31.2 M 0.826 0.94 0.94 17.77 245 1.06 5.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9d69c2a-5e59-4e58-aaf7-7c428c8a7d4b/@@download/cross_correlation_plot/ENCFF994DFNENCFF438UFH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB371OAT michael-snyder:L-2408 "ENCFF994DFN,ENCFF438UFH" HiSeq 2000 2016-10-09T17:13:48.853729+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gPQ0jv1g5yGjfvVx0KZ5 ENCSR608HVP https://www.encodeproject.org/experiments/ENCSR608HVP "recombinant protein,transcription factor" eGFP-KLF13-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF829XLC https://www.encodeproject.org/files/ENCFF829XLC/@@download/ENCFF829XLC.bam ENCFF046OVB https://www.encodeproject.org/files/ENCFF046OVB/@@download/ENCFF046OVB.bam 59.4 M 0 58.1 M 0.978 PE 100 100 native 25.4 M 0.0 M 17.5 M 0.590 0.69 0.68 2.96 210 1.11 8.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae5064fb-4731-43d8-aef0-2fa474b66495/@@download/cross_correlation_plot/ENCFF358PYPENCFF684JBQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB645ARI michael-snyder:L-2389 "ENCFF684JBQ,ENCFF358PYP" HiSeq 2000 2016-10-09T17:14:18.800892+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40080jv1zBYbxYJ5zzz3k ENCSR608HVP https://www.encodeproject.org/experiments/ENCSR608HVP "recombinant protein,transcription factor" eGFP-KLF13-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF771KEQ https://www.encodeproject.org/files/ENCFF771KEQ/@@download/ENCFF771KEQ.bam ENCFF466WRX https://www.encodeproject.org/files/ENCFF466WRX/@@download/ENCFF466WRX.bam 77.8 M 0 76.3 M 0.981 PE 100 100 native 33.5 M 0.0 M 29.9 M 0.769 0.89 0.89 9.24 195 1.09 6.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4aa8db8-d2b7-4e25-8fa2-b351231e5ad9/@@download/cross_correlation_plot/ENCFF519FTAENCFF607CQM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB203KFJ michael-snyder:L-2390 "ENCFF519FTA,ENCFF607CQM" HiSeq 2000 2016-10-09T17:17:20.222473+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv401j0jv1vY92b0GYjVFgQ ENCSR818DQV https://www.encodeproject.org/experiments/ENCSR818DQV "recombinant protein,transcription factor" eGFP-MAFG-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF773DBT https://www.encodeproject.org/files/ENCFF773DBT/@@download/ENCFF773DBT.bam ENCFF804RFI https://www.encodeproject.org/files/ENCFF804RFI/@@download/ENCFF804RFI.bam 63.1 M 0 61.9 M 0.981 PE 100 100 native 27.0 M 0.0 M 24.2 M 0.768 0.91 0.91 11.39 225 1.34 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/d773f02e-5c66-45df-84b9-ad00abc52aa8/@@download/cross_correlation_plot/ENCFF683PDCENCFF307CQO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB754JCU michael-snyder:L-2458 "ENCFF683PDC,ENCFF307CQO" HiSeq 2000 2016-10-09T17:06:32.965651+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6J100jv1YFyQ90J3z9yfJ ENCSR818DQV https://www.encodeproject.org/experiments/ENCSR818DQV "recombinant protein,transcription factor" eGFP-MAFG-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF253HOC https://www.encodeproject.org/files/ENCFF253HOC/@@download/ENCFF253HOC.bam ENCFF181XDA https://www.encodeproject.org/files/ENCFF181XDA/@@download/ENCFF181XDA.bam 59.2 M 0 58.1 M 0.980 PE 100 100 native 25.5 M 0.0 M 23.3 M 0.788 0.93 0.93 13.28 215 1.43 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/71b49e45-061c-4e58-9926-39f657447d08/@@download/cross_correlation_plot/ENCFF711WIAENCFF131JSB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB918FBQ michael-snyder:L-2462 "ENCFF131JSB,ENCFF711WIA" HiSeq 2000 2016-10-09T17:06:01.996390+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6J380jv1v69xp00g4J2Yz ENCSR647ZXA https://www.encodeproject.org/experiments/ENCSR647ZXA "recombinant protein,transcription factor" eGFP-MEF2D-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF047IWR https://www.encodeproject.org/files/ENCFF047IWR/@@download/ENCFF047IWR.bam ENCFF968AVX https://www.encodeproject.org/files/ENCFF968AVX/@@download/ENCFF968AVX.bam 43.7 M 0 41.9 M 0.960 PE 100 100 native 18.0 M 0.0 M 17.0 M 0.781 0.95 0.95 19.10 215 1.12 2.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5f29e5b-1cac-4f18-9d5e-b6fabccb109b/@@download/cross_correlation_plot/ENCFF987YBAENCFF482ODR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB091OUX michael-snyder:L-2536 "ENCFF482ODR,ENCFF987YBA" HiSeq 2000 2016-10-09T17:03:35.826120+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42180jv1zBYbxYJ5zzz77 ENCSR647ZXA https://www.encodeproject.org/experiments/ENCSR647ZXA "recombinant protein,transcription factor" eGFP-MEF2D-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF662HRL https://www.encodeproject.org/files/ENCFF662HRL/@@download/ENCFF662HRL.bam ENCFF161JEL https://www.encodeproject.org/files/ENCFF161JEL/@@download/ENCFF161JEL.bam 51.7 M 0 48.8 M 0.944 PE 100 100 native 19.5 M 0.0 M 18.3 M 0.709 0.94 0.94 17.17 205 1.13 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/e86cf4ef-5ed8-4b15-ae85-b8270be54805/@@download/cross_correlation_plot/ENCFF703DNAENCFF958CZA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB428UIE michael-snyder:L-2540 "ENCFF958CZA,ENCFF703DNA" HiSeq 2000 2016-10-09T17:04:52.373418+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42300jv1QxJBfj5Zb2pYb ENCSR552YGL https://www.encodeproject.org/experiments/ENCSR552YGL "recombinant protein,transcription factor" eGFP-NFE2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF581SOT https://www.encodeproject.org/files/ENCFF581SOT/@@download/ENCFF581SOT.bam ENCFF722CKU https://www.encodeproject.org/files/ENCFF722CKU/@@download/ENCFF722CKU.bam 49.6 M 0 48.7 M 0.981 PE 100 100 native 21.4 M 0.0 M 19.5 M 0.786 0.95 0.95 20.73 210 1.78 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/95ac7042-4d28-4d44-84b8-008733bea72b/@@download/cross_correlation_plot/ENCFF118PSYENCFF034LKJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB768TMO michael-snyder:L-2315 "ENCFF118PSY,ENCFF034LKJ" HiSeq 2000 2016-10-09T17:30:25.457881+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64bj0jv1z38xVGv104v67 ENCSR552YGL https://www.encodeproject.org/experiments/ENCSR552YGL "recombinant protein,transcription factor" eGFP-NFE2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF945TUI https://www.encodeproject.org/files/ENCFF945TUI/@@download/ENCFF945TUI.bam ENCFF651SRT https://www.encodeproject.org/files/ENCFF651SRT/@@download/ENCFF651SRT.bam 36.9 M 0 36.0 M 0.976 PE 100 100 native 15.7 M 0.0 M 14.5 M 0.784 0.95 0.95 18.04 205 1.65 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6b2e61b-153a-41ae-be7a-c6cb9d80e100/@@download/cross_correlation_plot/ENCFF719JFLENCFF105YSI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB695IPK michael-snyder:L-2366 "ENCFF719JFL,ENCFF105YSI" HiSeq 2000 2016-10-09T17:04:18.727776+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64j00jv1z5Z5kK1VpQJKk ENCSR557PSD https://www.encodeproject.org/experiments/ENCSR557PSD "recombinant protein,transcription factor" eGFP-NFE2L1-human K562 immortalized cell line michael-snyder ENCODE3 no fastqs pipeline completed ENCSR632SHZ https://www.encodeproject.org/experiments/ENCSR632SHZ "recombinant protein,transcription factor" eGFP-NFE2L1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF697TDR https://www.encodeproject.org/files/ENCFF697TDR/@@download/ENCFF697TDR.bam ENCFF700LWP https://www.encodeproject.org/files/ENCFF700LWP/@@download/ENCFF700LWP.bam 65.4 M 0 63.2 M 0.966 PE 100 100 native 27.1 M 0.0 M 23.6 M 0.722 0.87 0.87 7.61 200 1.08 6.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/1404eb73-52ea-4503-8e3a-dc62c46cf220/@@download/cross_correlation_plot/ENCFF576NTQENCFF686CXJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB296MDB michael-snyder:L-2459 "ENCFF576NTQ,ENCFF686CXJ" HiSeq 2000 2016-10-09T17:08:00.606682+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4QQj0jv1QxJBfj5Zb2q36 ENCSR632SHZ https://www.encodeproject.org/experiments/ENCSR632SHZ "recombinant protein,transcription factor" eGFP-NFE2L1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF027QPB https://www.encodeproject.org/files/ENCFF027QPB/@@download/ENCFF027QPB.bam ENCFF383VZD https://www.encodeproject.org/files/ENCFF383VZD/@@download/ENCFF383VZD.bam 45.5 M 0 43.9 M 0.964 PE 100 100 native 19.2 M 0.0 M 12.6 M 0.555 0.66 0.67 3.00 205 1.20 4.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/047be280-78b7-4c80-9e18-53fdce9e00ee/@@download/cross_correlation_plot/ENCFF226RVIENCFF657HVC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB069WHB michael-snyder:L-2463 "ENCFF657HVC,ENCFF226RVI" HiSeq 2000 2016-10-09T17:03:18.443850+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4QX80jv1XYYX2Fxk3f5VP ENCSR178DEG https://www.encodeproject.org/experiments/ENCSR178DEG "recombinant protein,transcription factor" eGFP-NR2C1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF096KBP https://www.encodeproject.org/files/ENCFF096KBP/@@download/ENCFF096KBP.bam ENCFF276NMY https://www.encodeproject.org/files/ENCFF276NMY/@@download/ENCFF276NMY.bam 80.7 M 0 78.6 M 0.973 PE 100 100 native 34.8 M 0.0 M 29.4 M 0.727 0.84 0.84 6.27 185 1.32 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec929db2-234b-4793-993f-1a661cf8fd07/@@download/cross_correlation_plot/ENCFF960ZIDENCFF096VXL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB755WMD michael-snyder:L-2522 "ENCFF096VXL,ENCFF960ZID" HiSeq 4000 2016-12-15T03:55:53.940112+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qFX00369G1Z412B01V1xj ENCSR178DEG https://www.encodeproject.org/experiments/ENCSR178DEG "recombinant protein,transcription factor" eGFP-NR2C1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF285CII https://www.encodeproject.org/files/ENCFF285CII/@@download/ENCFF285CII.bam ENCFF402ILX https://www.encodeproject.org/files/ENCFF402ILX/@@download/ENCFF402ILX.bam 58.7 M 0 57.2 M 0.975 PE 100 100 native 25.6 M 0.0 M 21.2 M 0.722 0.83 0.83 5.72 190 1.37 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/88d4fbdd-86e3-4416-ab50-ed678b1e1399/@@download/cross_correlation_plot/ENCFF621NBRENCFF230HNM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB152UJT michael-snyder:L-2527 "ENCFF621NBR,ENCFF230HNM" HiSeq 4000 2016-12-15T02:32:40.749016+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18qJ1j03694jP708pv8X4y0 ENCSR130PDE https://www.encodeproject.org/experiments/ENCSR130PDE "recombinant protein,transcription factor" eGFP-NR4A1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF786GEU https://www.encodeproject.org/files/ENCFF786GEU/@@download/ENCFF786GEU.bam ENCFF237ZDR https://www.encodeproject.org/files/ENCFF237ZDR/@@download/ENCFF237ZDR.bam 110.7 M 0 104.1 M 0.940 PE 100 100 native 45.9 M 0.0 M 27.3 M 0.493 0.60 0.59 2.38 240 1.10 3.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2d9a1fd-ce88-4861-840f-c09577530c1f/@@download/cross_correlation_plot/ENCFF760LCQENCFF681PIN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB952VTX michael-snyder:L-2424 "ENCFF760LCQ,ENCFF681PIN" HiSeq 2000 2016-08-30T17:59:17.950336+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3gj0369Kbz03YVBXG008 ENCSR130PDE https://www.encodeproject.org/experiments/ENCSR130PDE "recombinant protein,transcription factor" eGFP-NR4A1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF908PSF https://www.encodeproject.org/files/ENCFF908PSF/@@download/ENCFF908PSF.bam ENCFF810QEF https://www.encodeproject.org/files/ENCFF810QEF/@@download/ENCFF810QEF.bam 118.9 M 0 109.3 M 0.919 PE 100 100 native 48.1 M 0.0 M 26.1 M 0.439 0.54 0.53 2.06 230 1.10 3.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/68c8632c-45b4-465d-bb5c-7368d7979dcd/@@download/cross_correlation_plot/ENCFF671VDIENCFF301GRJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB336CSQ michael-snyder:L-2425 "ENCFF301GRJ,ENCFF671VDI" HiSeq 2000 2016-08-30T17:57:52.427913+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ3pj0369BQ7VQPxBqP1QJ ENCSR263DFP https://www.encodeproject.org/experiments/ENCSR263DFP "recombinant protein,transcription factor" eGFP-PBX2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF616QUW https://www.encodeproject.org/files/ENCFF616QUW/@@download/ENCFF616QUW.bam ENCFF982QMD https://www.encodeproject.org/files/ENCFF982QMD/@@download/ENCFF982QMD.bam 58.0 M 0 56.6 M 0.976 PE 100 100 native 24.7 M 0.0 M 19.9 M 0.687 0.81 0.80 4.94 200 1.44 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cc05263-e633-445a-a0a3-1d0f242164e5/@@download/cross_correlation_plot/ENCFF932THVENCFF410UIX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB725KCV michael-snyder:L-2460 "ENCFF410UIX,ENCFF932THV" HiSeq 2000 2016-10-09T17:37:12.199515+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61y00jv1q5825v91XY305 ENCSR263DFP https://www.encodeproject.org/experiments/ENCSR263DFP "recombinant protein,transcription factor" eGFP-PBX2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF577WGL https://www.encodeproject.org/files/ENCFF577WGL/@@download/ENCFF577WGL.bam ENCFF466NIM https://www.encodeproject.org/files/ENCFF466NIM/@@download/ENCFF466NIM.bam 45.4 M 0 43.9 M 0.968 PE 100 100 native 19.4 M 0.0 M 14.9 M 0.658 0.77 0.77 4.19 220 1.50 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/83f89ff8-dad3-4a33-8618-f239daddf46b/@@download/cross_correlation_plot/ENCFF176RUDENCFF793URQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB199PDG michael-snyder:L-2464 "ENCFF793URQ,ENCFF176RUD" HiSeq 2000 2016-10-09T17:39:05.741164+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62000jv1z5Z5kK1VpQJK5 ENCSR400FSM https://www.encodeproject.org/experiments/ENCSR400FSM "recombinant protein,transcription factor" eGFP-POLR2H-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF241ZAF https://www.encodeproject.org/files/ENCFF241ZAF/@@download/ENCFF241ZAF.bam ENCFF665FNS https://www.encodeproject.org/files/ENCFF665FNS/@@download/ENCFF665FNS.bam 62.9 M 0 61.4 M 0.975 PE 100 100 native 26.7 M 0.0 M 16.5 M 0.526 0.63 0.63 2.73 260 1.25 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/4acb82a2-bb03-460e-8122-455d3b47aa75/@@download/cross_correlation_plot/ENCFF613UATENCFF618IBA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB223NVK peggy-farnham:POLR2H-Rep1-library "ENCFF618IBA,ENCFF613UAT" HiSeq 2000 2016-10-08T07:51:09.150799+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbJg00jv1qz5v4z8X7v4vy ENCSR400FSM https://www.encodeproject.org/experiments/ENCSR400FSM "recombinant protein,transcription factor" eGFP-POLR2H-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF825VBC https://www.encodeproject.org/files/ENCFF825VBC/@@download/ENCFF825VBC.bam ENCFF398YEY https://www.encodeproject.org/files/ENCFF398YEY/@@download/ENCFF398YEY.bam 68.1 M 0 67.0 M 0.984 PE 100 100 native 29.6 M 0.0 M 20.6 M 0.604 0.70 0.69 3.04 235 1.33 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/900a5399-f0a4-4357-b247-b9e48f65fcb2/@@download/cross_correlation_plot/ENCFF524UOO-ENCFF022SAF_pooledENCFF277ZND-ENCFF446YHR_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB890AJD peggy-farnham:POLR2H-Rep2-library "ENCFF022SAF,ENCFF524UOO,ENCFF446YHR,ENCFF277ZND" HiSeq 2000 2016-10-08T07:51:36.827298+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbJkj0jv1XGZPJj8YpxPJy ENCSR126FZN https://www.encodeproject.org/experiments/ENCSR126FZN "recombinant protein,transcription factor" eGFP-PTRF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF400SKV https://www.encodeproject.org/files/ENCFF400SKV/@@download/ENCFF400SKV.bam ENCFF507CFN https://www.encodeproject.org/files/ENCFF507CFN/@@download/ENCFF507CFN.bam 64.4 M 0 61.9 M 0.962 PE 100 100 native 26.6 M 0.0 M 23.9 M 0.743 0.90 0.90 9.83 220 1.07 3.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee2d8cff-e844-4493-863a-fffd71044ab5/@@download/cross_correlation_plot/ENCFF474LQUENCFF532XZW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB576AXT michael-snyder:L-2506 "ENCFF474LQU,ENCFF532XZW" HiSeq 2000 2016-10-09T17:06:18.792301+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Jkj0jv1vY92b0GYjVGJV ENCSR126FZN https://www.encodeproject.org/experiments/ENCSR126FZN "recombinant protein,transcription factor" eGFP-PTRF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF498KCA https://www.encodeproject.org/files/ENCFF498KCA/@@download/ENCFF498KCA.bam ENCFF647HAV https://www.encodeproject.org/files/ENCFF647HAV/@@download/ENCFF647HAV.bam 61.6 M 0 60.4 M 0.980 PE 100 100 native 26.1 M 0.0 M 23.6 M 0.767 0.91 0.91 10.37 215 1.07 4.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/f46d78c6-294d-4a5d-b4e9-3b93d9a8da06/@@download/cross_correlation_plot/ENCFF141RCBENCFF781WSM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB834VOO michael-snyder:L-2511 "ENCFF141RCB,ENCFF781WSM" HiSeq 2000 2016-10-09T17:09:16.219892+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Jv00jv1XvFGkBjjfjV15 ENCSR314BBS https://www.encodeproject.org/experiments/ENCSR314BBS "recombinant protein,transcription factor" eGFP-PTTG1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF586KRI https://www.encodeproject.org/files/ENCFF586KRI/@@download/ENCFF586KRI.bam ENCFF102GIR https://www.encodeproject.org/files/ENCFF102GIR/@@download/ENCFF102GIR.bam 47.7 M 0 46.8 M 0.980 PE 100 100 native 20.3 M 0.0 M 18.1 M 0.759 0.90 0.89 9.23 225 1.10 4.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/dec9d3bb-eb7c-47f9-8a15-92c7257156c0/@@download/cross_correlation_plot/ENCFF529BRMENCFF277CCO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB710GIY michael-snyder:L-2507 "ENCFF277CCO,ENCFF529BRM" HiSeq 2000 2016-10-09T17:12:48.415067+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xfQ0jv1vY92b0GYjVFbG ENCSR314BBS https://www.encodeproject.org/experiments/ENCSR314BBS "recombinant protein,transcription factor" eGFP-PTTG1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF662KUU https://www.encodeproject.org/files/ENCFF662KUU/@@download/ENCFF662KUU.bam ENCFF109QZW https://www.encodeproject.org/files/ENCFF109QZW/@@download/ENCFF109QZW.bam 54.7 M 0 53.8 M 0.982 PE 100 100 native 23.4 M 0.0 M 21.3 M 0.779 0.91 0.91 11.36 220 1.08 4.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/df7890e1-a230-4639-ac8a-c4cc294bb72b/@@download/cross_correlation_plot/ENCFF349DXWENCFF660MJG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB636VQQ michael-snyder:L-2512 "ENCFF349DXW,ENCFF660MJG" HiSeq 2000 2016-10-09T17:13:52.387316+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xj80jv1XYYX2Fxk3f4kV ENCSR410DWC https://www.encodeproject.org/experiments/ENCSR410DWC "recombinant protein,transcription factor" eGFP-PYGO2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF434YXL https://www.encodeproject.org/files/ENCFF434YXL/@@download/ENCFF434YXL.bam ENCFF609XXU https://www.encodeproject.org/files/ENCFF609XXU/@@download/ENCFF609XXU.bam 64.5 M 0 61.8 M 0.958 PE 100 100 native 26.3 M 0.0 M 23.3 M 0.724 0.89 0.89 8.95 200 1.09 4.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/24d6d407-3d06-45ee-87d7-b26d70688e42/@@download/cross_correlation_plot/ENCFF150HADENCFF768KWX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB851MSF michael-snyder:L-2519 "ENCFF768KWX,ENCFF150HAD" HiSeq 2000 2016-10-09T17:04:18.180985+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6V9Q0jv1QkfFX8V1vJbK4 ENCSR410DWC https://www.encodeproject.org/experiments/ENCSR410DWC "recombinant protein,transcription factor" eGFP-PYGO2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF649ORS https://www.encodeproject.org/files/ENCFF649ORS/@@download/ENCFF649ORS.bam ENCFF279FNY https://www.encodeproject.org/files/ENCFF279FNY/@@download/ENCFF279FNY.bam 69.3 M 0 67.5 M 0.974 PE 100 100 native 28.5 M 0.0 M 22.1 M 0.637 0.78 0.77 4.25 195 1.08 5.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/43ec3e32-4b3f-430e-af59-10ecbb227ada/@@download/cross_correlation_plot/ENCFF315YLZENCFF649JEY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB329LTQ michael-snyder:L-2524 "ENCFF649JEY,ENCFF315YLZ" HiSeq 2000 2016-10-09T17:04:46.577175+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6VG00jv1YvGVzF100Zf9P ENCSR772EEN https://www.encodeproject.org/experiments/ENCSR772EEN "recombinant protein,transcription factor" eGFP-RELA-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF557QLG https://www.encodeproject.org/files/ENCFF557QLG/@@download/ENCFF557QLG.bam ENCFF180NUP https://www.encodeproject.org/files/ENCFF180NUP/@@download/ENCFF180NUP.bam 70.4 M 0 69.5 M 0.987 PE 100 100 native 30.9 M 0.0 M 28.1 M 0.798 0.91 0.91 10.91 285 1.06 9.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/55b5f33e-738c-4a58-8577-441fb63fec77/@@download/cross_correlation_plot/ENCFF148FMXENCFF528GYT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB998PQU michael-snyder:L-2434 "ENCFF148FMX,ENCFF528GYT" HiSeq 2000 2016-10-09T17:14:23.433402+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zJ80jv1f60PxyZ9JGP1V ENCSR772EEN https://www.encodeproject.org/experiments/ENCSR772EEN "recombinant protein,transcription factor" eGFP-RELA-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF158BYF https://www.encodeproject.org/files/ENCFF158BYF/@@download/ENCFF158BYF.bam ENCFF608LFT https://www.encodeproject.org/files/ENCFF608LFT/@@download/ENCFF608LFT.bam 62.5 M 0 61.7 M 0.988 PE 100 100 native 27.4 M 0.0 M 21.6 M 0.691 0.79 0.78 4.40 305 1.07 8.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/e52393b2-16dc-4a2a-a990-765631d3a89e/@@download/cross_correlation_plot/ENCFF074UIOENCFF186DEJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB738KFG michael-snyder:L-2435 "ENCFF186DEJ,ENCFF074UIO" HiSeq 2000 2016-10-09T17:13:29.941930+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zP00jv1vY92b0GYjVFfp ENCSR671GFC https://www.encodeproject.org/experiments/ENCSR671GFC "recombinant protein,transcription factor" eGFP-TAF7-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF562PEW https://www.encodeproject.org/files/ENCFF562PEW/@@download/ENCFF562PEW.bam ENCFF611NQA https://www.encodeproject.org/files/ENCFF611NQA/@@download/ENCFF611NQA.bam 67.1 M 0 64.8 M 0.965 PE 100 100 native 28.0 M 0.0 M 26.0 M 0.775 0.93 0.93 14.13 190 1.09 3.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ee648fb-ca96-4299-a0af-ac63ee1118b7/@@download/cross_correlation_plot/ENCFF926UQWENCFF098GTH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB704OAE michael-snyder:L-2552 "ENCFF926UQW,ENCFF098GTH" HiSeq 2000 2016-10-09T17:09:10.551819+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6BVQ0jv1b6Q2yZ51Zb5Yj ENCSR671GFC https://www.encodeproject.org/experiments/ENCSR671GFC "recombinant protein,transcription factor" eGFP-TAF7-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF931HWG https://www.encodeproject.org/files/ENCFF931HWG/@@download/ENCFF931HWG.bam ENCFF348ZJL https://www.encodeproject.org/files/ENCFF348ZJL/@@download/ENCFF348ZJL.bam 55.9 M 0 53.3 M 0.954 PE 100 100 native 22.6 M 0.0 M 21.0 M 0.751 0.93 0.93 13.96 200 1.10 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/60b98c6c-29f9-477b-95ba-97c3b46f0ad7/@@download/cross_correlation_plot/ENCFF099UOSENCFF790ADI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB350DWH michael-snyder:L-2558 "ENCFF099UOS,ENCFF790ADI" HiSeq 2000 2016-10-09T17:08:28.690110+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6BYj0jv1XYYX2Fxk3f69z ENCSR635GTR https://www.encodeproject.org/experiments/ENCSR635GTR "recombinant protein,transcription factor" eGFP-TEAD2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF280AEF https://www.encodeproject.org/files/ENCFF280AEF/@@download/ENCFF280AEF.bam ENCFF192VLT https://www.encodeproject.org/files/ENCFF192VLT/@@download/ENCFF192VLT.bam 59.4 M 0 58.2 M 0.980 PE 100 100 native 25.6 M 0.0 M 24.4 M 0.823 0.96 0.96 23.05 180 1.08 3.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2d7a9d7-5b91-45b6-99f3-39acc721e799/@@download/cross_correlation_plot/ENCFF677HXIENCFF442MPQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB047LXS michael-snyder:L-2470 "ENCFF442MPQ,ENCFF677HXI" HiSeq 2000 2016-10-09T17:07:22.179720+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4PB00jv1zBYbxYJ5zzzVG ENCSR635GTR https://www.encodeproject.org/experiments/ENCSR635GTR "recombinant protein,transcription factor" eGFP-TEAD2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF949ENV https://www.encodeproject.org/files/ENCFF949ENV/@@download/ENCFF949ENV.bam ENCFF363TIR https://www.encodeproject.org/files/ENCFF363TIR/@@download/ENCFF363TIR.bam 57.9 M 0 56.8 M 0.981 PE 100 100 native 25.1 M 0.0 M 23.8 M 0.823 0.95 0.95 20.02 170 1.10 3.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/134386d2-b697-44ac-be66-e96994aaa5ca/@@download/cross_correlation_plot/ENCFF734FMSENCFF335SYB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB385HFC michael-snyder:L-2475 "ENCFF335SYB,ENCFF734FMS" HiSeq 2000 2016-10-09T17:06:06.797363+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4PFQ0jv1vY92b0GYjVG4Q ENCSR787RVK https://www.encodeproject.org/experiments/ENCSR787RVK "recombinant protein,transcription factor" eGFP-TSC22D4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF302OZO https://www.encodeproject.org/files/ENCFF302OZO/@@download/ENCFF302OZO.bam ENCFF541FEN https://www.encodeproject.org/files/ENCFF541FEN/@@download/ENCFF541FEN.bam 90.3 M 0 88.0 M 0.975 PE 100 100 native 37.6 M 0.0 M 37.1 M 0.822 0.99 0.99 88.49 190 1.06 3.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/be4ed288-efca-45d8-a90f-33e649f06af7/@@download/cross_correlation_plot/ENCFF284BOOENCFF014DOG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB021WRW michael-snyder:L-2586 "ENCFF014DOG,ENCFF284BOO" HiSeq 2000 2016-10-09T17:41:12.364629+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5zY00jv1xFKXGVbpg0QF9 ENCSR787RVK https://www.encodeproject.org/experiments/ENCSR787RVK "recombinant protein,transcription factor" eGFP-TSC22D4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF498EFE https://www.encodeproject.org/files/ENCFF498EFE/@@download/ENCFF498EFE.bam ENCFF898IOL https://www.encodeproject.org/files/ENCFF898IOL/@@download/ENCFF898IOL.bam 49.3 M 0 48.2 M 0.977 PE 100 100 native 20.7 M 0.0 M 20.5 M 0.834 0.99 0.99 151.69 185 1.09 4.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6872dcb-7253-4076-890a-c7c10fbf31d3/@@download/cross_correlation_plot/ENCFF493SOQENCFF398EAS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB483YWT michael-snyder:L-2591 "ENCFF493SOQ,ENCFF398EAS" HiSeq 2000 2016-10-09T17:36:06.651202+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5zf80jv1b6Q2yZ51Zb5K4 ENCSR117WTM https://www.encodeproject.org/experiments/ENCSR117WTM "recombinant protein,transcription factor" eGFP-ZNF24-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF391BBO https://www.encodeproject.org/files/ENCFF391BBO/@@download/ENCFF391BBO.bam ENCFF561BHX https://www.encodeproject.org/files/ENCFF561BHX/@@download/ENCFF561BHX.bam 49.5 M 0 47.8 M 0.965 PE 100 100 native 20.5 M 0.0 M 19.9 M 0.804 0.97 0.97 35.71 220 1.13 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/96d57084-7427-42f6-893d-ba1e3572c149/@@download/cross_correlation_plot/ENCFF977AJQENCFF157JAL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB849NCQ michael-snyder:L-2538 "ENCFF977AJQ,ENCFF157JAL" HiSeq 2000 2016-10-09T17:02:50.472120+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Fb80jv1vY92b0GYjVG1v ENCSR117WTM https://www.encodeproject.org/experiments/ENCSR117WTM "recombinant protein,transcription factor" eGFP-ZNF24-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF396AXY https://www.encodeproject.org/files/ENCFF396AXY/@@download/ENCFF396AXY.bam ENCFF524RZA https://www.encodeproject.org/files/ENCFF524RZA/@@download/ENCFF524RZA.bam 45.1 M 0 42.9 M 0.951 PE 100 100 native 17.1 M 0.0 M 16.8 M 0.745 0.98 0.98 60.17 210 1.14 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd0ee3b3-1060-4827-8bf1-263bbf1f5544/@@download/cross_correlation_plot/ENCFF718HUUENCFF615CRG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB753TOI michael-snyder:L-2542 "ENCFF615CRG,ENCFF718HUU" HiSeq 2000 2016-10-09T17:02:53.516145+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4FfQ0jv1QxJBfj5Zb2pxk ENCSR674SCQ https://www.encodeproject.org/experiments/ENCSR674SCQ "recombinant protein,transcription factor" eGFP-ZNF354B-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF864BUV https://www.encodeproject.org/files/ENCFF864BUV/@@download/ENCFF864BUV.bam ENCFF693AQW https://www.encodeproject.org/files/ENCFF693AQW/@@download/ENCFF693AQW.bam 159.4 M 0 151.8 M 0.952 PE 100 100 native 62.5 M 0.0 M 55.9 M 0.701 0.89 0.89 9.18 260 1.02 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6a93676-b218-4d23-bd6d-bcce822b98fa/@@download/cross_correlation_plot/ENCFF132GDVENCFF407ICD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB877DTV peggy-farnham:ZNF354B_Rep1-library "ENCFF407ICD,ENCFF132GDV" HiSeq 4000 2017-02-09T16:23:34.262951+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2Jf9380369P0pv25XgqQ8BF ENCSR674SCQ https://www.encodeproject.org/experiments/ENCSR674SCQ "recombinant protein,transcription factor" eGFP-ZNF354B-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF103HTZ https://www.encodeproject.org/files/ENCFF103HTZ/@@download/ENCFF103HTZ.bam ENCFF730WWH https://www.encodeproject.org/files/ENCFF730WWH/@@download/ENCFF730WWH.bam 163.5 M 0 157.1 M 0.961 PE 100 100 native 65.1 M 0.0 M 57.0 M 0.697 0.88 0.87 7.77 230 1.03 3.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/d81904d5-a12d-46ca-82cc-daed89c66ef3/@@download/cross_correlation_plot/ENCFF185PQGENCFF835TQN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB440JVS peggy-farnham:ZNF354B_Rep2-library "ENCFF835TQN,ENCFF185PQG" HiSeq 4000 2017-02-09T16:23:52.694756+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2Jf99Q0369JvJJB5Xq16900 ENCSR598TIR https://www.encodeproject.org/experiments/ENCSR598TIR "recombinant protein,transcription factor" eGFP-ZNF507-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF606TJM https://www.encodeproject.org/files/ENCFF606TJM/@@download/ENCFF606TJM.bam ENCFF156HSL https://www.encodeproject.org/files/ENCFF156HSL/@@download/ENCFF156HSL.bam 95.9 M 0 91.5 M 0.954 PE 100 100 native 36.7 M 0.0 M 34.6 M 0.721 0.94 0.94 16.98 270 1.05 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/87bccfa7-c915-4fca-8387-4b09e21ab5a1/@@download/cross_correlation_plot/ENCFF306MYTENCFF574SDW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB805SUJ peggy-farnham:ZNF507_Rep1-library "ENCFF574SDW,ENCFF306MYT" HiSeq 4000 2017-02-09T16:17:17.876313+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2Jf9Gj0369P0pv25XgqQ8Bf ENCSR598TIR https://www.encodeproject.org/experiments/ENCSR598TIR "recombinant protein,transcription factor" eGFP-ZNF507-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF772UWJ https://www.encodeproject.org/files/ENCFF772UWJ/@@download/ENCFF772UWJ.bam ENCFF582ETC https://www.encodeproject.org/files/ENCFF582ETC/@@download/ENCFF582ETC.bam 160.7 M 0 153.7 M 0.957 PE 100 100 native 62.8 M 0.0 M 57.4 M 0.714 0.91 0.91 11.33 260 1.03 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8285423-5c95-403f-8300-c7dfd17b4576/@@download/cross_correlation_plot/ENCFF240EGCENCFF905PWR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB115LID peggy-farnham:ZNF507_Rep2-library "ENCFF240EGC,ENCFF905PWR" HiSeq 4000 2017-02-09T16:23:34.316618+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2Jf9fj0369JvJJB5Xq16917 ENCSR591CCL https://www.encodeproject.org/experiments/ENCSR591CCL "recombinant protein,transcription factor" eGFP-ZNF512-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF996AFH https://www.encodeproject.org/files/ENCFF996AFH/@@download/ENCFF996AFH.bam ENCFF093LOE https://www.encodeproject.org/files/ENCFF093LOE/@@download/ENCFF093LOE.bam 121.8 M 0 119.7 M 0.983 PE 100 100 native 51.0 M 0.0 M 50.2 M 0.825 0.99 0.99 67.32 315 1.03 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca430610-c75c-4c20-a6c4-b4d3362d3aa0/@@download/cross_correlation_plot/ENCFF123LEBENCFF229NRD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB502KXG peggy-farnham:ZNF512-Rep1-library "ENCFF229NRD,ENCFF123LEB" HiSeq 2000 2016-10-09T17:15:35.438106+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6JJ80jv1b6Q2yZ51Zb5Zp ENCSR591CCL https://www.encodeproject.org/experiments/ENCSR591CCL "recombinant protein,transcription factor" eGFP-ZNF512-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF300AUR https://www.encodeproject.org/files/ENCFF300AUR/@@download/ENCFF300AUR.bam ENCFF120HZB https://www.encodeproject.org/files/ENCFF120HZB/@@download/ENCFF120HZB.bam 109.1 M 0 107.2 M 0.983 PE 100 100 native 45.5 M 0.0 M 44.7 M 0.820 0.98 0.98 54.80 265 1.03 2.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b6d4695-b634-4c16-9d76-5441cd4d8e1f/@@download/cross_correlation_plot/ENCFF968UUMENCFF055XKT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB836XAD peggy-farnham:ZNF512-Rep2-library "ENCFF055XKT,ENCFF968UUM" HiSeq 2000 2016-10-09T17:13:07.598572+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6JPQ0jv1XpBpGXQxqxYQx ENCSR532EMP https://www.encodeproject.org/experiments/ENCSR532EMP "recombinant protein,transcription factor" eGFP-ZNF740-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF165STC https://www.encodeproject.org/files/ENCFF165STC/@@download/ENCFF165STC.bam ENCFF850OUI https://www.encodeproject.org/files/ENCFF850OUI/@@download/ENCFF850OUI.bam 75.2 M 0 73.6 M 0.980 PE 100 100 native 31.7 M 0.0 M 28.7 M 0.764 0.91 0.90 10.21 225 1.02 12.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/1bcbe2bd-4658-420c-98d3-b8353c4d0ade/@@download/cross_correlation_plot/ENCFF607RXBENCFF633AET.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB852SAT peggy-farnham:ZNF740-Rep1-library "ENCFF633AET,ENCFF607RXB" HiSeq 2000 2016-10-09T17:04:12.687527+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46F80jv1XvFGkBjjfjQJ5 ENCSR532EMP https://www.encodeproject.org/experiments/ENCSR532EMP "recombinant protein,transcription factor" eGFP-ZNF740-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF694KHP https://www.encodeproject.org/files/ENCFF694KHP/@@download/ENCFF694KHP.bam ENCFF831QFF https://www.encodeproject.org/files/ENCFF831QFF/@@download/ENCFF831QFF.bam 101.3 M 0 99.3 M 0.980 PE 100 100 native 42.7 M 0.0 M 35.5 M 0.701 0.83 0.83 5.57 250 1.03 3.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/8673b0ed-219b-411d-aef8-c57868856607/@@download/cross_correlation_plot/ENCFF554XIXENCFF111REI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB015DNV peggy-farnham:ZNF740-Rep2-library "ENCFF111REI,ENCFF554XIX" HiSeq 2000 2016-10-09T17:08:05.331865+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46Gj0jv1XYYX2Fxk3f554 ENCSR024CNP https://www.encodeproject.org/experiments/ENCSR024CNP transcription factor EGR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF528YNP https://www.encodeproject.org/files/ENCFF528YNP/@@download/ENCFF528YNP.bam ENCFF316YDL https://www.encodeproject.org/files/ENCFF316YDL/@@download/ENCFF316YDL.bam 75.0 M 0 72.9 M 0.971 PE 100 100 native 31.4 M 0.0 M 28.8 M 0.767 0.92 0.92 11.78 180 1.30 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/070a4140-5d82-4993-b1ae-ab38c9b01d10/@@download/cross_correlation_plot/ENCFF025AGMENCFF751XCN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB345UGA michael-snyder:L-2945 "ENCFF751XCN,ENCFF025AGM" HiSeq 2000 2017-02-22T05:25:41.379258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5YXQ0369Pxz1G3pPgxjQ2 ENCSR024CNP https://www.encodeproject.org/experiments/ENCSR024CNP transcription factor EGR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF431IVA https://www.encodeproject.org/files/ENCFF431IVA/@@download/ENCFF431IVA.bam ENCFF234MFX https://www.encodeproject.org/files/ENCFF234MFX/@@download/ENCFF234MFX.bam 57.9 M 0 55.8 M 0.964 PE 100 100 native 24.0 M 0.0 M 19.9 M 0.687 0.83 0.83 5.64 185 1.34 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd12aaf0-3e11-4f4e-8ef5-44c4119a27af/@@download/cross_correlation_plot/ENCFF871VWHENCFF045QIG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB428KJP michael-snyder:L-2946 "ENCFF045QIG,ENCFF871VWH" HiSeq 2000 2017-02-22T05:23:41.377465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5Yfj036951XgQKGZX8569 ENCSR211LTF https://www.encodeproject.org/experiments/ENCSR211LTF transcription factor EGR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF153QLL https://www.encodeproject.org/files/ENCFF153QLL/@@download/ENCFF153QLL.bam ENCFF652QJT https://www.encodeproject.org/files/ENCFF652QJT/@@download/ENCFF652QJT.bam 50.2 M 0 48.9 M 0.976 PE 100 100 native 21.6 M 0.0 M 19.6 M 0.782 0.91 0.91 10.67 220 1.24 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/6145c2b5-2805-4077-b401-efa1ee771b53/@@download/cross_correlation_plot/ENCFF326BXXENCFF207NIS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB999MQA michael-snyder:L-2799 "ENCFF207NIS,ENCFF326BXX" HiSeq 2000 2017-01-31T17:43:25.687122+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27xpp80369P8ygG5ZVzfP45 ENCSR211LTF https://www.encodeproject.org/experiments/ENCSR211LTF transcription factor EGR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF259XPA https://www.encodeproject.org/files/ENCFF259XPA/@@download/ENCFF259XPA.bam ENCFF992NYF https://www.encodeproject.org/files/ENCFF992NYF/@@download/ENCFF992NYF.bam 49.3 M 0 48.5 M 0.983 PE 100 100 native 21.4 M 0.0 M 19.5 M 0.790 0.91 0.91 11.00 215 1.26 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/759c5582-cfd6-4a62-ac04-4af70b3ec07a/@@download/cross_correlation_plot/ENCFF217XOVENCFF599IKS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB012WJS michael-snyder:L-2800 "ENCFF599IKS,ENCFF217XOV" HiSeq 2000 2017-01-31T17:43:21.278509+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F27zzx803691f6y913jXVV01 ENCSR502OEK https://www.encodeproject.org/experiments/ENCSR502OEK transcription factor ELF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF784MTZ https://www.encodeproject.org/files/ENCFF784MTZ/@@download/ENCFF784MTZ.bam ENCFF713WWL https://www.encodeproject.org/files/ENCFF713WWL/@@download/ENCFF713WWL.bam 50.5 M 0 46.3 M 0.917 PE 100 100 native 20.5 M 0.0 M 19.1 M 0.758 0.93 0.93 15.06 240 1.17 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/78297368-a438-402a-a392-80dbf8bfbaec/@@download/cross_correlation_plot/ENCFF132GWNENCFF456MJL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB183AFP michael-snyder:L-2021 "ENCFF456MJL,ENCFF132GWN" HiSeq 2000 2016-10-09T17:37:06.794723+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kF00jv1pBzjzVx0B7f35 ENCSR502OEK https://www.encodeproject.org/experiments/ENCSR502OEK transcription factor ELF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF477CYZ https://www.encodeproject.org/files/ENCFF477CYZ/@@download/ENCFF477CYZ.bam ENCFF561PIE https://www.encodeproject.org/files/ENCFF561PIE/@@download/ENCFF561PIE.bam 52.7 M 0 49.6 M 0.941 PE 100 100 native 22.0 M 0.0 M 20.9 M 0.794 0.95 0.95 21.33 225 1.14 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/f936baaa-154a-4563-9863-a262bdae451b/@@download/cross_correlation_plot/ENCFF932JXGENCFF070OBA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB181VJH michael-snyder:L-2022 "ENCFF932JXG,ENCFF070OBA" HiSeq 2000 2016-10-09T17:37:23.346361+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kJ00jv1YvGVzF100Zf54 ENCSR638QHV https://www.encodeproject.org/experiments/ENCSR638QHV transcription factor ELF4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF339RWU https://www.encodeproject.org/files/ENCFF339RWU/@@download/ENCFF339RWU.bam ENCFF039TGK https://www.encodeproject.org/files/ENCFF039TGK/@@download/ENCFF039TGK.bam 53.0 M 0 52.0 M 0.982 PE 100 100 native 23.2 M 0.0 M 17.9 M 0.677 0.77 0.77 4.23 220 1.22 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bad3226-39e1-40cf-beee-fe166b92ae5e/@@download/cross_correlation_plot/ENCFF587AYWENCFF625HJX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB492XWJ michael-snyder:L-1800 "ENCFF587AYW,ENCFF625HJX" HiSeq 2000 2016-10-09T17:05:26.228330+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6GKj0jv1fvz446Zf2J5xV ENCSR638QHV https://www.encodeproject.org/experiments/ENCSR638QHV transcription factor ELF4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF958WMW https://www.encodeproject.org/files/ENCFF958WMW/@@download/ENCFF958WMW.bam ENCFF921IIJ https://www.encodeproject.org/files/ENCFF921IIJ/@@download/ENCFF921IIJ.bam 32.9 M 0 32.3 M 0.982 PE 100 100 native 14.3 M 0.0 M 12.9 M 0.782 0.90 0.90 9.97 215 1.22 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c2b6ba4-11ba-481e-a54f-fd3f1f2998f4/@@download/cross_correlation_plot/ENCFF270PKYENCFF029HOW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB861IEP michael-snyder:L-1801 "ENCFF270PKY,ENCFF029HOW" HiSeq 2000 2016-10-09T17:05:04.925992+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6GV80jv1YFyQ90J3z9ybx ENCSR000EFU https://www.encodeproject.org/experiments/ENCSR000EFU transcription factor ELK1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF554BLC https://www.encodeproject.org/files/ENCFF554BLC/@@download/ENCFF554BLC.bam ENCFF790WTE https://www.encodeproject.org/files/ENCFF790WTE/@@download/ENCFF790WTE.bam 27.8 M 0 25.9 M 0.933 SE 36 36 native 0.0 M 19.9 M 19.1 M 0.687 0.96 0.96 24.14 140 1.02 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/d428d39f-ffd4-4dad-8f2f-a0a232c49801/@@download/cross_correlation_plot/ENCFF000YMO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMV ENCFF000YMO Illumina Genome Analyzer 2016-12-11T03:29:00.460060+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Z7803696Kk1YFv8qy55P ENCSR000EFU https://www.encodeproject.org/experiments/ENCSR000EFU transcription factor ELK1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF865ISL https://www.encodeproject.org/files/ENCFF865ISL/@@download/ENCFF865ISL.bam ENCFF818OUC https://www.encodeproject.org/files/ENCFF818OUC/@@download/ENCFF818OUC.bam 20.4 M 0 19.1 M 0.933 SE 36 36 native 0.0 M 14.4 M 13.9 M 0.683 0.97 0.97 37.42 100 1.04 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c21d08e-83d6-4134-b14a-52da3aef0832/@@download/cross_correlation_plot/ENCFF000YMR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANU ENCFF000YMR Illumina Genome Analyzer 2016-12-11T03:19:22.828818+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164ZG003696Kk1YFv8qy55j ENCSR000EGE https://www.encodeproject.org/experiments/ENCSR000EGE transcription factor EP300-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF982AFE https://www.encodeproject.org/files/ENCFF982AFE/@@download/ENCFF982AFE.bam ENCFF883XER https://www.encodeproject.org/files/ENCFF883XER/@@download/ENCFF883XER.bam 32.0 M 0 29.3 M 0.918 SE 36 36 native 0.0 M 22.9 M 20.9 M 0.654 0.92 0.92 11.98 125 1.16 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9c554dc-9901-4419-aeba-1d349d2af5ec/@@download/cross_correlation_plot/ENCFF000YVM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHG ENCFF000YVM Illumina Genome Analyzer 2016-12-11T02:28:46.217450+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163kJ003699Z3Y8493qbpyZ ENCSR000EGE https://www.encodeproject.org/experiments/ENCSR000EGE transcription factor EP300-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF200PYZ https://www.encodeproject.org/files/ENCFF200PYZ/@@download/ENCFF200PYZ.bam ENCFF566CML https://www.encodeproject.org/files/ENCFF566CML/@@download/ENCFF566CML.bam 32.9 M 0 31.7 M 0.962 SE 36 36 native 0.0 M 25.0 M 22.7 M 0.690 0.91 0.92 12.14 125 1.33 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/68c5fe49-67e3-4fd6-8cf9-d0db159b385b/@@download/cross_correlation_plot/ENCFF000YVO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHF ENCFF000YVO Illumina Genome Analyzer 2016-12-11T02:29:18.445433+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163kX8036933PVVJ7Qq01KJ ENCSR000EGY https://www.encodeproject.org/experiments/ENCSR000EGY transcription factor EP300-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF419COX https://www.encodeproject.org/files/ENCFF419COX/@@download/ENCFF419COX.bam ENCFF708ZJO https://www.encodeproject.org/files/ENCFF708ZJO/@@download/ENCFF708ZJO.bam 27.8 M 0 1.8 M 0.066 SE 36 36 native 0.0 M 0.2 M 0.2 M 0.008 1.00 1.00 1115.01 -135 1.03 -1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/47ac0380-8025-4b97-8973-36d687eb059c/@@download/cross_correlation_plot/ENCFF000YWT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHC ENCFF000YWT Illumina Genome Analyzer 2016-12-11T02:52:13.381985+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1649q003695Kj1j8qPQgkYk ENCSR000EGY https://www.encodeproject.org/experiments/ENCSR000EGY transcription factor EP300-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF362KLU https://www.encodeproject.org/files/ENCFF362KLU/@@download/ENCFF362KLU.bam ENCFF485LXI https://www.encodeproject.org/files/ENCFF485LXI/@@download/ENCFF485LXI.bam 31.3 M 0 27.7 M 0.887 SE 36 36 native 0.0 M 20.9 M 18.2 M 0.581 0.87 0.87 7.29 110 1.04 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/7680e702-ad76-4c50-a402-88802dea1a3b/@@download/cross_correlation_plot/ENCFF000YWU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AII ENCFF000YWU Illumina Genome Analyzer 2016-12-11T03:09:27.844769+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1649zj03697vfpg2qKbyZV3 ENCSR817QKV https://www.encodeproject.org/experiments/ENCSR817QKV transcription factor EP400-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF751WCI https://www.encodeproject.org/files/ENCFF751WCI/@@download/ENCFF751WCI.bam ENCFF111XPI https://www.encodeproject.org/files/ENCFF111XPI/@@download/ENCFF111XPI.bam 80.9 M 0 77.0 M 0.952 PE 100 100 native 33.5 M 0.0 M 22.7 M 0.561 0.68 0.68 3.14 265 1.19 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c8de939-6c53-4e8f-b7b1-8abaa89d6db8/@@download/cross_correlation_plot/ENCFF604RKIENCFF478BKV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB312GNT michael-snyder:L-2239 "ENCFF604RKI,ENCFF478BKV" HiSeq 4000 2016-09-16T03:20:12.232040+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyXy003696x9VJV48y49qp ENCSR817QKV https://www.encodeproject.org/experiments/ENCSR817QKV transcription factor EP400-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF786JYO https://www.encodeproject.org/files/ENCFF786JYO/@@download/ENCFF786JYO.bam ENCFF622EUC https://www.encodeproject.org/files/ENCFF622EUC/@@download/ENCFF622EUC.bam 226.0 M 0 215.8 M 0.955 PE 100 100 native 94.1 M 0.0 M 75.9 M 0.672 0.81 0.81 5.13 235 1.16 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/5be707cb-a722-4f68-b898-4f49cd6eccf5/@@download/cross_correlation_plot/ENCFF076RPAENCFF636OJT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB410LRX michael-snyder:L-2286 "ENCFF636OJT,ENCFF076RPA" HiSeq 4000 2016-09-16T03:30:14.476528+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyY200369J6bkz8ZJ7qyBQ ENCSR486IFJ https://www.encodeproject.org/experiments/ENCSR486IFJ transcription factor ESRRA-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF857YYV https://www.encodeproject.org/files/ENCFF857YYV/@@download/ENCFF857YYV.bam ENCFF957ZDE https://www.encodeproject.org/files/ENCFF957ZDE/@@download/ENCFF957ZDE.bam 67.6 M 0 65.1 M 0.963 PE 100 100 native 29.4 M 0.0 M 26.8 M 0.793 0.91 0.91 11.28 170 1.27 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/61148f48-df58-451b-bde2-ea13c7401b8e/@@download/cross_correlation_plot/ENCFF002DOXENCFF002EFV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB180ZTB michael-snyder:672_B_TruSeq_TTAGGC "ENCFF002EFV,ENCFF002DOX" HiSeq 2000 2016-10-09T17:05:50.248953+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41VQ0jv1g5yGjfvVx0Kxq ENCSR486IFJ https://www.encodeproject.org/experiments/ENCSR486IFJ transcription factor ESRRA-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF320WXN https://www.encodeproject.org/files/ENCFF320WXN/@@download/ENCFF320WXN.bam ENCFF469LYX https://www.encodeproject.org/files/ENCFF469LYX/@@download/ENCFF469LYX.bam 70.5 M 0 65.3 M 0.927 PE 100 100 native 29.5 M 0.0 M 19.6 M 0.555 0.67 0.66 2.80 245 1.17 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e7568ef-04c3-4fde-beb1-12a326ff4fc3/@@download/cross_correlation_plot/ENCFF002DUBENCFF002DOY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB650BRJ michael-snyder:705_B_TruSeq_CGATGT "ENCFF002DOY,ENCFF002DUB" HiSeq 2000 2016-10-09T17:05:43.843346+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41Y80jv1zBYbxYJ5zzz60 ENCSR124BJR https://www.encodeproject.org/experiments/ENCSR124BJR transcription factor ETV6-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF003FNG https://www.encodeproject.org/files/ENCFF003FNG/@@download/ENCFF003FNG.bam ENCFF807KWU https://www.encodeproject.org/files/ENCFF807KWU/@@download/ENCFF807KWU.bam 30.7 M 0 27.3 M 0.890 SE 36 36 native 0.0 M 20.7 M 19.4 M 0.631 0.94 0.94 16.83 110 1.05 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a344b95-2e86-4770-aff8-adad8549deaf/@@download/cross_correlation_plot/ENCFF002EEK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB247PDR michael-snyder:ETV6_sc-166835_K562_Rep1 ENCFF002EEK Illumina Genome Analyzer IIx 2016-10-08T07:48:13.798318+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbJPj0jv1ZZ7QvzQX049jq ENCSR124BJR https://www.encodeproject.org/experiments/ENCSR124BJR transcription factor ETV6-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF417FHN https://www.encodeproject.org/files/ENCFF417FHN/@@download/ENCFF417FHN.bam ENCFF373SHV https://www.encodeproject.org/files/ENCFF373SHV/@@download/ENCFF373SHV.bam 28.8 M 0 25.9 M 0.898 SE 36 36 native 0.0 M 19.9 M 18.0 M 0.625 0.91 0.91 10.78 135 1.03 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/94172f03-7ed9-412a-a254-772d8ceac3f1/@@download/cross_correlation_plot/ENCFF002EEB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB365UJY michael-snyder:ETV6_sc-166835_K562_Rep2 ENCFF002EEB Illumina Genome Analyzer IIx 2016-10-08T07:47:45.790307+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbJVj0jv1XGZPJj8YpxPJf ENCSR819LHG https://www.encodeproject.org/experiments/ENCSR819LHG transcription factor FOXA1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF611PXX https://www.encodeproject.org/files/ENCFF611PXX/@@download/ENCFF611PXX.bam ENCFF009OHH https://www.encodeproject.org/files/ENCFF009OHH/@@download/ENCFF009OHH.bam 75.2 M 0 71.8 M 0.954 PE 100 100 native 28.7 M 0.0 M 25.8 M 0.685 0.90 0.90 9.51 200 1.06 7.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/3361811c-aeca-4af2-826e-537e2de135b6/@@download/cross_correlation_plot/ENCFF394CJBENCFF186GBM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB089LJO michael-snyder:L-2970 "ENCFF394CJB,ENCFF186GBM" HiSeq 2000 2016-10-27T22:21:00.649809+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bxfQ03695YX1xgJBKFkx9 ENCSR819LHG https://www.encodeproject.org/experiments/ENCSR819LHG transcription factor FOXA1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF364SJK https://www.encodeproject.org/files/ENCFF364SJK/@@download/ENCFF364SJK.bam ENCFF134FYL https://www.encodeproject.org/files/ENCFF134FYL/@@download/ENCFF134FYL.bam 60.9 M 0 57.7 M 0.947 PE 100 100 native 22.9 M 0.0 M 20.6 M 0.677 0.90 0.90 9.77 200 1.08 4.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/2750e319-fdc2-40f4-bf62-ddfa167ffe9d/@@download/cross_correlation_plot/ENCFF692TZIENCFF762YIW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB562CFQ michael-snyder:L-2971 "ENCFF762YIW,ENCFF692TZI" HiSeq 2000 2016-10-27T22:17:52.748311+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bxkj036923z1QYVBPp85K ENCSR302AWT https://www.encodeproject.org/experiments/ENCSR302AWT transcription factor FOXK2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF703CKR https://www.encodeproject.org/files/ENCFF703CKR/@@download/ENCFF703CKR.bam ENCFF919HNS https://www.encodeproject.org/files/ENCFF919HNS/@@download/ENCFF919HNS.bam 40.6 M 0 39.9 M 0.983 PE 100 100 native 17.6 M 0.0 M 16.5 M 0.812 0.94 0.94 16.08 195 1.15 2.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d474ee7-6f97-4a6b-b2dc-23085bc2b55a/@@download/cross_correlation_plot/ENCFF097VAHENCFF795LQA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB993DGG michael-snyder:L-162 "ENCFF795LQA,ENCFF097VAH" HiSeq 2000 2016-10-09T17:07:52.213420+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6B4j0jv1x3KYJK9kQ04gq ENCSR302AWT https://www.encodeproject.org/experiments/ENCSR302AWT transcription factor FOXK2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF931HHQ https://www.encodeproject.org/files/ENCFF931HHQ/@@download/ENCFF931HHQ.bam ENCFF172BUN https://www.encodeproject.org/files/ENCFF172BUN/@@download/ENCFF172BUN.bam 51.8 M 0 51.1 M 0.985 PE 100 100 native 22.5 M 0.0 M 21.7 M 0.836 0.96 0.96 27.18 200 1.14 2.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f116b0b-7af4-45db-8a4c-416fa52b3e69/@@download/cross_correlation_plot/ENCFF383GMFENCFF441GEH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB941GGD michael-snyder:L-179 "ENCFF441GEH,ENCFF383GMF" HiSeq 2000 2016-10-09T17:08:51.139823+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6B780jv1XpBpGXQxqxYQ6 ENCSR508DQA https://www.encodeproject.org/experiments/ENCSR508DQA transcription factor FOXK2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF373AFZ https://www.encodeproject.org/files/ENCFF373AFZ/@@download/ENCFF373AFZ.bam ENCFF718ARO https://www.encodeproject.org/files/ENCFF718ARO/@@download/ENCFF718ARO.bam 50.0 M 0 48.4 M 0.967 PE 100 100 native 20.9 M 0.0 M 18.6 M 0.746 0.89 0.89 9.11 165 1.24 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/12d769b5-f174-4612-adec-d9a3852d40e5/@@download/cross_correlation_plot/ENCFF260CTFENCFF959CFI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB318JMG michael-snyder:L-161 "ENCFF959CFI,ENCFF260CTF" HiSeq 2000 2016-10-09T17:12:43.512893+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vvQ0jv1xPyfX78Yz4gZP ENCSR508DQA https://www.encodeproject.org/experiments/ENCSR508DQA transcription factor FOXK2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF563FZR https://www.encodeproject.org/files/ENCFF563FZR/@@download/ENCFF563FZR.bam ENCFF156DFG https://www.encodeproject.org/files/ENCFF156DFG/@@download/ENCFF156DFG.bam 43.8 M 0 43.0 M 0.983 PE 100 100 native 18.9 M 0.0 M 18.2 M 0.831 0.96 0.96 25.74 235 1.20 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad59467b-d88c-4644-884f-b70e3c1b0ba1/@@download/cross_correlation_plot/ENCFF344DMAENCFF164JCA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB308QXN michael-snyder:L-178 "ENCFF344DMA,ENCFF164JCA" HiSeq 2000 2016-10-09T17:12:46.229645+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vy00jv1XvFGkBjjfjQ2Q ENCSR429QPP https://www.encodeproject.org/experiments/ENCSR429QPP transcription factor FOXM1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF182YDN https://www.encodeproject.org/files/ENCFF182YDN/@@download/ENCFF182YDN.bam ENCFF463IID https://www.encodeproject.org/files/ENCFF463IID/@@download/ENCFF463IID.bam 44.0 M 0 43.0 M 0.977 PE 100 100 native 19.2 M 0.0 M 14.7 M 0.670 0.77 0.77 4.22 220 1.21 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/255fa576-a6d2-4abe-90b0-14f664fe6bef/@@download/cross_correlation_plot/ENCFF167VUSENCFF007LTF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB006HES michael-snyder:L-281 "ENCFF007LTF,ENCFF167VUS" HiSeq 2000 2016-10-09T17:07:05.947602+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4JPj0jv1XvFGkBjjfjQb4 ENCSR429QPP https://www.encodeproject.org/experiments/ENCSR429QPP transcription factor FOXM1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF855NIZ https://www.encodeproject.org/files/ENCFF855NIZ/@@download/ENCFF855NIZ.bam ENCFF066BXQ https://www.encodeproject.org/files/ENCFF066BXQ/@@download/ENCFF066BXQ.bam 60.0 M 0 58.4 M 0.975 PE 100 100 native 25.7 M 0.0 M 17.6 M 0.588 0.69 0.68 3.10 210 1.21 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d9607da-1a02-4edd-b7a5-70c306867c91/@@download/cross_correlation_plot/ENCFF888ZYMENCFF749GVI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB351DCF michael-snyder:L-282 "ENCFF749GVI,ENCFF888ZYM" HiSeq 2000 2016-10-09T17:07:24.565818+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4JVQ0jv1QxJBfj5Zb2q04 ENCSR000EFT https://www.encodeproject.org/experiments/ENCSR000EFT transcription factor GATA1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF392GZX https://www.encodeproject.org/files/ENCFF392GZX/@@download/ENCFF392GZX.bam ENCFF355PTV https://www.encodeproject.org/files/ENCFF355PTV/@@download/ENCFF355PTV.bam 26.7 M 0 22.9 M 0.859 SE 36 28 28 0.0 M 16.4 M 14.6 M 0.547 0.89 0.89 9.18 115 1.27 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef107f2c-34d5-40be-8b68-8beb43254c92/@@download/cross_correlation_plot/ENCFF000YND-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJT ENCFF000YND Illumina Genome Analyzer 2017-01-05T21:22:40.439214+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7q5003699GG65G542pjZp ENCSR000EFT https://www.encodeproject.org/experiments/ENCSR000EFT transcription factor GATA1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF431ZVW https://www.encodeproject.org/files/ENCFF431ZVW/@@download/ENCFF431ZVW.bam ENCFF485XKZ https://www.encodeproject.org/files/ENCFF485XKZ/@@download/ENCFF485XKZ.bam 26.0 M 0 24.8 M 0.955 SE 36 28 28 0.0 M 17.8 M 15.1 M 0.581 0.85 0.85 6.25 110 1.12 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/93ed5cbf-1fe2-4044-a4c9-4269a308be61/@@download/cross_correlation_plot/ENCFF000YNF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADA ENCFF000YNF Illumina Genome Analyzer 2017-01-05T21:23:05.085550+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7qBQ0369Pyf0JG49f3355 ENCSR547LKC https://www.encodeproject.org/experiments/ENCSR547LKC transcription factor GATAD2B-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF918JWJ https://www.encodeproject.org/files/ENCFF918JWJ/@@download/ENCFF918JWJ.bam ENCFF204LAC https://www.encodeproject.org/files/ENCFF204LAC/@@download/ENCFF204LAC.bam 93.5 M 0 91.3 M 0.976 PE 100 100 native 40.8 M 0.0 M 36.3 M 0.775 0.89 0.89 8.84 160 1.06 2.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/f81a2042-fea2-451c-8616-9599abf0ec5c/@@download/cross_correlation_plot/ENCFF489DPLENCFF999EFL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB668YGI michael-snyder:L-3388 "ENCFF489DPL,ENCFF999EFL" HiSeq 4000 2017-04-19T10:54:53.360055+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q7zpj0369JF3x84jBzQ38g ENCSR547LKC https://www.encodeproject.org/experiments/ENCSR547LKC transcription factor GATAD2B-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF580EBG https://www.encodeproject.org/files/ENCFF580EBG/@@download/ENCFF580EBG.bam ENCFF505PWS https://www.encodeproject.org/files/ENCFF505PWS/@@download/ENCFF505PWS.bam 114.9 M 0 109.9 M 0.957 PE 100 100 native 48.8 M 0.0 M 41.6 M 0.724 0.85 0.85 6.62 155 1.06 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/04732920-8a38-4b98-a221-34dd5ea2432a/@@download/cross_correlation_plot/ENCFF552ETPENCFF523ULM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB788LZY michael-snyder:L-3389 "ENCFF523ULM,ENCFF552ETP" HiSeq 4000 2017-04-19T10:56:35.603329+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q804Q0369Pq0zYPpqJvbPK ENCSR000EHC https://www.encodeproject.org/experiments/ENCSR000EHC "RNA binding protein,transcription factor" GTF2F1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF040MZK https://www.encodeproject.org/files/ENCFF040MZK/@@download/ENCFF040MZK.bam ENCFF376DQB https://www.encodeproject.org/files/ENCFF376DQB/@@download/ENCFF376DQB.bam 29.3 M 0 26.5 M 0.907 SE 36 36 native 0.0 M 19.4 M 18.4 M 0.628 0.95 0.95 19.10 105 1.03 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7bb591a-12f8-435c-9414-88f355e10ae3/@@download/cross_correlation_plot/ENCFF000YOM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARP ENCFF000YOM Illumina Genome Analyzer 2016-12-11T00:14:23.700594+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163X3j0369Bxb30J6x5bZ7z ENCSR000EHC https://www.encodeproject.org/experiments/ENCSR000EHC "RNA binding protein,transcription factor" GTF2F1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF215TDO https://www.encodeproject.org/files/ENCFF215TDO/@@download/ENCFF215TDO.bam ENCFF073UUX https://www.encodeproject.org/files/ENCFF073UUX/@@download/ENCFF073UUX.bam 22.2 M 0 20.3 M 0.918 SE 36 36 native 0.0 M 15.0 M 14.7 M 0.665 0.98 0.98 53.36 100 1.04 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a613a11-97fd-40f0-b785-90b7a2e9ac72/@@download/cross_correlation_plot/ENCFF000YOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADY ENCFF000YOO Illumina Genome Analyzer 2016-12-10T23:46:02.240312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163X8Q036933PVVJ7Qq01JY ENCSR000EFN https://www.encodeproject.org/experiments/ENCSR000EFN transcription factor HCFC1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF976DWY https://www.encodeproject.org/files/ENCFF976DWY/@@download/ENCFF976DWY.bam ENCFF754SCV https://www.encodeproject.org/files/ENCFF754SCV/@@download/ENCFF754SCV.bam 29.8 M 0 29.1 M 0.976 SE 36 36 native 0.0 M 22.3 M 20.9 M 0.703 0.94 0.96 27.69 110 1.31 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0699b04-c5cb-42f0-94e5-375984101a56/@@download/cross_correlation_plot/ENCFF000YOE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASP ENCFF000YOE Illumina Genome Analyzer 2016-12-10T18:43:57.706978+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1629k803697vfpg2qKbyZ5P ENCSR000EFN https://www.encodeproject.org/experiments/ENCSR000EFN transcription factor HCFC1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF068XVC https://www.encodeproject.org/files/ENCFF068XVC/@@download/ENCFF068XVC.bam ENCFF220DXN https://www.encodeproject.org/files/ENCFF220DXN/@@download/ENCFF220DXN.bam 22.9 M 0 22.2 M 0.969 SE 36 36 native 0.0 M 17.2 M 16.0 M 0.700 0.94 0.95 25.06 120 1.53 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/a849710d-d529-406a-95ac-dbe0c317b078/@@download/cross_correlation_plot/ENCFF000YOG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASO ENCFF000YOG Illumina Genome Analyzer 2016-12-10T17:49:37.200978+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1629xj03692pJ09J76g5ffB ENCSR387UWP https://www.encodeproject.org/experiments/ENCSR387UWP "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF677JTW https://www.encodeproject.org/files/ENCFF677JTW/@@download/ENCFF677JTW.bam ENCFF278JTC https://www.encodeproject.org/files/ENCFF278JTC/@@download/ENCFF278JTC.bam 48.3 M 0 47.6 M 0.985 PE 100 100 native 21.4 M 0.0 M 18.1 M 0.750 0.85 0.85 6.45 215 1.27 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/16ad406a-2157-4a81-98ff-50794c734e68/@@download/cross_correlation_plot/ENCFF919QDEENCFF034CSX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB942RWU michael-snyder:L-11 "ENCFF034CSX,ENCFF919QDE" HiSeq 2000 2016-10-09T17:12:32.371592+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vQQ0jv1g5yGjfvVx0Kjy ENCSR387UWP https://www.encodeproject.org/experiments/ENCSR387UWP "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF921IAQ https://www.encodeproject.org/files/ENCFF921IAQ/@@download/ENCFF921IAQ.bam ENCFF035YWU https://www.encodeproject.org/files/ENCFF035YWU/@@download/ENCFF035YWU.bam 63.2 M 0 61.1 M 0.967 PE 100 100 native 26.4 M 0.0 M 22.0 M 0.695 0.83 0.83 5.87 210 1.27 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2f6543c-2c3a-4c7e-8693-9eb3464bd979/@@download/cross_correlation_plot/ENCFF517OWMENCFF871YPD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB118ODS michael-snyder:L-12 "ENCFF517OWM,ENCFF871YPD" HiSeq 2000 2016-10-09T17:13:51.110351+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vX00jv1f60PxyZ9JGKy4 ENCSR568PGX https://www.encodeproject.org/experiments/ENCSR568PGX "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF785NOU https://www.encodeproject.org/files/ENCFF785NOU/@@download/ENCFF785NOU.bam ENCFF789EWD https://www.encodeproject.org/files/ENCFF789EWD/@@download/ENCFF789EWD.bam 144.0 M 0 127.3 M 0.884 PE 100 100 native 56.3 M 0.0 M 32.2 M 0.447 0.57 0.57 2.26 205 1.06 4.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/0996f851-f953-40c2-90c9-926459a85a61/@@download/cross_correlation_plot/ENCFF895UGJENCFF910QTP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB747FPE michael-snyder:L-2915 "ENCFF895UGJ,ENCFF910QTP" HiSeq 4000 2016-10-27T22:24:11.794444+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bpG80369PQyG3V5B4504p ENCSR568PGX https://www.encodeproject.org/experiments/ENCSR568PGX "transcription factor,chromatin remodeller,RNA binding protein" HDAC1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF135YTU https://www.encodeproject.org/files/ENCFF135YTU/@@download/ENCFF135YTU.bam ENCFF550JCP https://www.encodeproject.org/files/ENCFF550JCP/@@download/ENCFF550JCP.bam 195.0 M 0 170.2 M 0.873 PE 100 100 native 74.0 M 0.0 M 55.7 M 0.571 0.75 0.75 3.87 190 1.04 3.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/28fe0b49-b39e-4219-9a5d-932c4fd512ba/@@download/cross_correlation_plot/ENCFF677ULQENCFF410PAM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB254MAR michael-snyder:L-2916 "ENCFF677ULQ,ENCFF410PAM" HiSeq 4000 2016-10-27T22:31:30.504269+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bpPQ0369GJ6xQfbB7F5zK ENCSR075HTM https://www.encodeproject.org/experiments/ENCSR075HTM "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF408BKE https://www.encodeproject.org/files/ENCFF408BKE/@@download/ENCFF408BKE.bam ENCFF203LSM https://www.encodeproject.org/files/ENCFF203LSM/@@download/ENCFF203LSM.bam 51.7 M 0 50.7 M 0.981 PE 100 100 native 22.6 M 0.0 M 20.2 M 0.783 0.90 0.90 9.60 215 1.15 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd713f07-903c-4ae7-86b0-12678a78f840/@@download/cross_correlation_plot/ENCFF362ZRFENCFF896IZU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB511MDO michael-snyder:L-2107 "ENCFF896IZU,ENCFF362ZRF" HiSeq 2000 2016-10-09T17:03:50.392303+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49V00jv1g5yGjfvVx0P3j ENCSR075HTM https://www.encodeproject.org/experiments/ENCSR075HTM "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF497GOO https://www.encodeproject.org/files/ENCFF497GOO/@@download/ENCFF497GOO.bam ENCFF876AWI https://www.encodeproject.org/files/ENCFF876AWI/@@download/ENCFF876AWI.bam 54.7 M 0 52.2 M 0.955 PE 100 100 native 23.2 M 0.0 M 21.4 M 0.782 0.92 0.92 12.80 220 1.11 2.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/878994d8-0cf1-4190-aa3e-d5cc1c297cc7/@@download/cross_correlation_plot/ENCFF990UUVENCFF741IHV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB207AXV michael-snyder:L-2108 "ENCFF990UUV,ENCFF741IHV" HiSeq 2000 2016-10-09T17:03:51.467811+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49XQ0jv1QxJBfj5Zb2pqY ENCSR197ALX https://www.encodeproject.org/experiments/ENCSR197ALX "RNA binding protein,transcription factor" HDGF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF702WHX https://www.encodeproject.org/files/ENCFF702WHX/@@download/ENCFF702WHX.bam ENCFF761ABS https://www.encodeproject.org/files/ENCFF761ABS/@@download/ENCFF761ABS.bam 40.6 M 0 40.2 M 0.990 PE 100 100 native 18.0 M 0.0 M 17.8 M 0.880 0.99 0.99 160.20 245 1.08 3.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/05994415-7ed4-42bb-9955-1f9cb6283090/@@download/cross_correlation_plot/ENCFF513AFYENCFF256BLE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB004BGH michael-snyder:L-175 "ENCFF513AFY,ENCFF256BLE" HiSeq 2000 2016-10-09T17:06:32.834171+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6F980jv1f60PxyZ9JGPfq ENCSR197ALX https://www.encodeproject.org/experiments/ENCSR197ALX "RNA binding protein,transcription factor" HDGF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF795OAZ https://www.encodeproject.org/files/ENCFF795OAZ/@@download/ENCFF795OAZ.bam ENCFF847GWD https://www.encodeproject.org/files/ENCFF847GWD/@@download/ENCFF847GWD.bam 65.3 M 0 63.1 M 0.966 PE 100 100 native 26.5 M 0.0 M 26.2 M 0.802 0.99 0.99 97.44 205 1.07 3.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e010d3e-7acd-4dd4-912e-c045cb4d1e8a/@@download/cross_correlation_plot/ENCFF112IGAENCFF302OWI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB562GOJ michael-snyder:L-184 "ENCFF112IGA,ENCFF302OWI" HiSeq 2000 2016-10-09T17:08:05.723777+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6FFQ0jv1xPyfX78Yz4jXf ENCSR563YDA https://www.encodeproject.org/experiments/ENCSR563YDA "RNA binding protein,transcription factor" HDGF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF769DDY https://www.encodeproject.org/files/ENCFF769DDY/@@download/ENCFF769DDY.bam ENCFF603HFB https://www.encodeproject.org/files/ENCFF603HFB/@@download/ENCFF603HFB.bam 55.0 M 0 54.2 M 0.985 PE 100 100 native 23.8 M 0.0 M 23.6 M 0.859 0.99 0.99 136.63 205 1.07 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc8913e3-78ce-417e-bea6-7ac9e87e158b/@@download/cross_correlation_plot/ENCFF598OBQENCFF324VNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB914YJE michael-snyder:L-174 "ENCFF324VNE,ENCFF598OBQ" HiSeq 2000 2016-10-09T17:30:06.091895+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66k00jv1q5825v91XY322 ENCSR563YDA https://www.encodeproject.org/experiments/ENCSR563YDA "RNA binding protein,transcription factor" HDGF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF221CPW https://www.encodeproject.org/files/ENCFF221CPW/@@download/ENCFF221CPW.bam ENCFF878BKO https://www.encodeproject.org/files/ENCFF878BKO/@@download/ENCFF878BKO.bam 69.9 M 0 67.3 M 0.963 PE 100 100 native 27.9 M 0.0 M 27.5 M 0.787 0.99 0.99 83.35 215 1.07 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/5742357d-6b15-4727-a4a6-70b85152d869/@@download/cross_correlation_plot/ENCFF664YJDENCFF214MWL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB520NBN michael-snyder:L-194 "ENCFF664YJD,ENCFF214MWL" HiSeq 2000 2016-10-09T17:30:33.110513+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66q00jv1q5825v91XY32F ENCSR091JXL https://www.encodeproject.org/experiments/ENCSR091JXL transcription factor HES1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF502NAY https://www.encodeproject.org/files/ENCFF502NAY/@@download/ENCFF502NAY.bam ENCFF635ZWL https://www.encodeproject.org/files/ENCFF635ZWL/@@download/ENCFF635ZWL.bam 50.6 M 0 49.1 M 0.971 PE 100 100 native 21.8 M 0.0 M 18.2 M 0.718 0.84 0.83 5.87 210 1.13 3.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/24562ffd-04b5-4f51-83f7-d329b406518d/@@download/cross_correlation_plot/ENCFF429KAXENCFF887TVH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB827SWV michael-snyder:L-283 "ENCFF429KAX,ENCFF887TVH" HiSeq 2000 2016-10-09T17:37:02.043265+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bx00jv1xPyfX78Yz4jQK ENCSR091JXL https://www.encodeproject.org/experiments/ENCSR091JXL transcription factor HES1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF046ACV https://www.encodeproject.org/files/ENCFF046ACV/@@download/ENCFF046ACV.bam ENCFF180TDZ https://www.encodeproject.org/files/ENCFF180TDZ/@@download/ENCFF180TDZ.bam 56.5 M 0 54.8 M 0.970 PE 100 100 native 24.1 M 0.0 M 17.7 M 0.626 0.74 0.73 3.63 210 1.14 3.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/308b1bfc-4d26-457d-9359-076011ec03b5/@@download/cross_correlation_plot/ENCFF583IRHENCFF600EDO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB696JWA michael-snyder:L-284 "ENCFF583IRH,ENCFF600EDO" HiSeq 2000 2016-10-09T17:38:32.459627+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4byj0jv1xPyfX78Yz4jQf ENCSR090JNM https://www.encodeproject.org/experiments/ENCSR090JNM RNA binding protein HLTF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF499CUL https://www.encodeproject.org/files/ENCFF499CUL/@@download/ENCFF499CUL.bam ENCFF926TVS https://www.encodeproject.org/files/ENCFF926TVS/@@download/ENCFF926TVS.bam 77.7 M 0 70.6 M 0.909 PE 100 100 native 30.7 M 0.0 M 30.0 M 0.774 0.98 0.98 50.18 200 1.07 3.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4e1a242-b7c7-42ba-859e-ce00121fca02/@@download/cross_correlation_plot/ENCFF787PGAENCFF017GMQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB220ELT michael-snyder:L-2236 "ENCFF787PGA,ENCFF017GMQ" HiSeq 2000 2016-10-09T17:39:13.585921+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61G00jv1fGZb9Vx2f3z2Q ENCSR090JNM https://www.encodeproject.org/experiments/ENCSR090JNM RNA binding protein HLTF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF904NPY https://www.encodeproject.org/files/ENCFF904NPY/@@download/ENCFF904NPY.bam ENCFF320FWE https://www.encodeproject.org/files/ENCFF320FWE/@@download/ENCFF320FWE.bam 59.3 M 0 58.1 M 0.981 PE 100 100 native 25.6 M 0.0 M 25.1 M 0.847 0.98 0.98 53.52 200 1.07 3.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f0afad7-91ed-4eaa-89b2-34a28309ff47/@@download/cross_correlation_plot/ENCFF873BJLENCFF565HIN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB261PCM michael-snyder:L-2283 "ENCFF565HIN,ENCFF873BJL" HiSeq 2000 2016-10-09T17:35:57.624711+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61K80jv1XpBpGXQxqxYJj ENCSR395HWC https://www.encodeproject.org/experiments/ENCSR395HWC transcription factor IKZF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF013MXK https://www.encodeproject.org/files/ENCFF013MXK/@@download/ENCFF013MXK.bam ENCFF781YKJ https://www.encodeproject.org/files/ENCFF781YKJ/@@download/ENCFF781YKJ.bam 45.3 M 0 43.3 M 0.956 PE 100 100 native 19.2 M 0.0 M 17.2 M 0.758 0.89 0.89 9.08 210 1.46 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc4a21ca-bfe4-4908-b984-a98e5ed7c683/@@download/cross_correlation_plot/ENCFF687HHRENCFF222FXU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB102PME michael-snyder:L-285 "ENCFF687HHR,ENCFF222FXU" HiSeq 2000 2016-10-09T17:36:38.622036+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ZKQ0jv1XvFGkBjjfjQvK ENCSR395HWC https://www.encodeproject.org/experiments/ENCSR395HWC transcription factor IKZF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF752FIR https://www.encodeproject.org/files/ENCFF752FIR/@@download/ENCFF752FIR.bam ENCFF160IPT https://www.encodeproject.org/files/ENCFF160IPT/@@download/ENCFF160IPT.bam 58.9 M 0 57.1 M 0.969 PE 100 100 native 25.1 M 0.0 M 20.2 M 0.687 0.81 0.80 4.94 205 1.66 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7c76686-9154-4168-b9ea-3e0c1d839825/@@download/cross_correlation_plot/ENCFF015LUTENCFF424OOE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB877SBR michael-snyder:L-286 "ENCFF424OOE,ENCFF015LUT" HiSeq 2000 2016-10-09T17:37:42.495487+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ZQ00jv1f60PxyZ9JGPYB ENCSR948VFL https://www.encodeproject.org/experiments/ENCSR948VFL transcription factor IKZF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF880SVB https://www.encodeproject.org/files/ENCFF880SVB/@@download/ENCFF880SVB.bam ENCFF693BGB https://www.encodeproject.org/files/ENCFF693BGB/@@download/ENCFF693BGB.bam 69.1 M 0 66.5 M 0.962 PE 100 100 native 29.1 M 0.0 M 28.5 M 0.824 0.98 0.98 45.70 200 1.25 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/c51e7af7-315d-41eb-abbf-45ede762d175/@@download/cross_correlation_plot/ENCFF156ZUZENCFF738CWY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB592VTM michael-snyder:L-2035 "ENCFF738CWY,ENCFF156ZUZ" HiSeq 2000 2016-10-08T07:46:56.212638+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbKKQ0jv1k8Jzvv9Z4ZY2y ENCSR948VFL https://www.encodeproject.org/experiments/ENCSR948VFL transcription factor IKZF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF016KRJ https://www.encodeproject.org/files/ENCFF016KRJ/@@download/ENCFF016KRJ.bam ENCFF818AVS https://www.encodeproject.org/files/ENCFF818AVS/@@download/ENCFF818AVS.bam 64.1 M 0 61.5 M 0.958 PE 100 100 native 27.0 M 0.0 M 26.3 M 0.819 0.97 0.97 38.05 195 1.40 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/d788bf9c-b603-47a2-95eb-ba7874e86441/@@download/cross_correlation_plot/ENCFF936LDIENCFF245IWG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB190FZE michael-snyder:L-2036 "ENCFF936LDI,ENCFF245IWG" HiSeq 2000 2016-10-08T07:44:22.407495+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbKV00jv1k8Jzvv9Z4ZY38 ENCSR000EGK https://www.encodeproject.org/experiments/ENCSR000EGK transcription factor IRF1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF168KTM https://www.encodeproject.org/files/ENCFF168KTM/@@download/ENCFF168KTM.bam ENCFF014UWV https://www.encodeproject.org/files/ENCFF014UWV/@@download/ENCFF014UWV.bam 25.8 M 0 25.1 M 0.974 SE 36 27 27 0.0 M 18.1 M 16.5 M 0.639 0.91 0.91 11.00 125 1.10 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/a057ab51-37af-4e19-a28c-be36e48c9789/@@download/cross_correlation_plot/ENCFF000YRQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APZ ENCFF000YRQ Illumina Genome Analyzer 2017-02-24T16:16:59.374580+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbPP003692fX3p8F7PgzBZ ENCSR000EGK https://www.encodeproject.org/experiments/ENCSR000EGK transcription factor IRF1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF299HHL https://www.encodeproject.org/files/ENCFF299HHL/@@download/ENCFF299HHL.bam ENCFF642KEX https://www.encodeproject.org/files/ENCFF642KEX/@@download/ENCFF642KEX.bam 32.7 M 0 31.9 M 0.976 SE 36 27 27 0.0 M 23.1 M 20.8 M 0.637 0.90 0.90 9.86 120 1.09 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/404a5442-082e-4b8c-835a-3d2743af315a/@@download/cross_correlation_plot/ENCFF000YRS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AVF ENCFF000YRS Illumina Genome Analyzer 2017-02-24T16:17:32.974503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbPZj03692ZzXjFjXX42g8 ENCSR000EGL https://www.encodeproject.org/experiments/ENCSR000EGL transcription factor IRF1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF259RRK https://www.encodeproject.org/files/ENCFF259RRK/@@download/ENCFF259RRK.bam ENCFF929ENI https://www.encodeproject.org/files/ENCFF929ENI/@@download/ENCFF929ENI.bam 32.5 M 0 31.4 M 0.968 SE 36 27 27 0.0 M 22.9 M 19.8 M 0.610 0.87 0.86 7.21 120 1.16 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/bba2817c-c157-488e-816d-930f59e6e177/@@download/cross_correlation_plot/ENCFF000YRH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASM ENCFF000YRH Illumina Genome Analyzer 2016-12-13T03:34:09.317034+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zqq003692pJ09J76g6090 ENCSR000EGL https://www.encodeproject.org/experiments/ENCSR000EGL transcription factor IRF1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF244IJF https://www.encodeproject.org/files/ENCFF244IJF/@@download/ENCFF244IJF.bam ENCFF509OLO https://www.encodeproject.org/files/ENCFF509OLO/@@download/ENCFF509OLO.bam 31.6 M 0 30.9 M 0.976 SE 36 27 27 0.0 M 22.1 M 20.6 M 0.651 0.93 0.93 14.79 115 1.08 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1ecea69-964f-4e5a-a7fe-267d9171195d/@@download/cross_correlation_plot/ENCFF000YRJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASN ENCFF000YRJ Illumina Genome Analyzer 2016-12-13T03:44:10.641174+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zxy003698ZxQY8q63XPYB ENCSR000EGT https://www.encodeproject.org/experiments/ENCSR000EGT transcription factor IRF1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF728WOA https://www.encodeproject.org/files/ENCFF728WOA/@@download/ENCFF728WOA.bam ENCFF728IDI https://www.encodeproject.org/files/ENCFF728IDI/@@download/ENCFF728IDI.bam 21.3 M 0 17.7 M 0.830 SE 36 27 27 0.0 M 11.9 M 11.3 M 0.533 0.96 0.96 24.34 120 1.33 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/a23ce311-3c1b-4b4f-a9f0-d2a49a6506dd/@@download/cross_correlation_plot/ENCFF000YSV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABO ENCFF000YSV Illumina Genome Analyzer 2016-12-13T03:23:30.263682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZyQ003695yqvv8q311kG1 ENCSR000EGT https://www.encodeproject.org/experiments/ENCSR000EGT transcription factor IRF1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF489YJG https://www.encodeproject.org/files/ENCFF489YJG/@@download/ENCFF489YJG.bam ENCFF061GCD https://www.encodeproject.org/files/ENCFF061GCD/@@download/ENCFF061GCD.bam 18.0 M 0 11.6 M 0.643 SE 27 27 27 0.0 M 6.9 M 6.7 M 0.371 0.97 0.97 36.41 115 1.38 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/932f5b94-9d69-4455-b737-644761aac05b/@@download/cross_correlation_plot/ENCFF000YTB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABN ENCFF000YTB Illumina Genome Analyzer 2016-12-13T03:14:09.728112+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZyBj036933PVVJ7Qq0Z7X ENCSR000EGU https://www.encodeproject.org/experiments/ENCSR000EGU transcription factor IRF1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF424IRC https://www.encodeproject.org/files/ENCFF424IRC/@@download/ENCFF424IRC.bam ENCFF323VLM https://www.encodeproject.org/files/ENCFF323VLM/@@download/ENCFF323VLM.bam 25.3 M 0 19.1 M 0.757 SE 36 27 27 0.0 M 13.0 M 12.6 M 0.497 0.97 0.97 31.72 105 1.04 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc0ccfca-2cb0-42fe-a879-2b6b5a188a6c/@@download/cross_correlation_plot/ENCFF000YRO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANB ENCFF000YRO Illumina Genome Analyzer 2016-12-13T03:34:22.777007+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zy5003698ZxQY8q63XPYg ENCSR000EGU https://www.encodeproject.org/experiments/ENCSR000EGU transcription factor IRF1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF408WDT https://www.encodeproject.org/files/ENCFF408WDT/@@download/ENCFF408WDT.bam ENCFF309IQN https://www.encodeproject.org/files/ENCFF309IQN/@@download/ENCFF309IQN.bam 9.9 M 0 8.9 M 0.898 SE 27 27 27 0.0 M 6.0 M 5.8 M 0.583 0.96 0.96 27.69 90 1.07 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/72c47d29-5116-4939-a87f-133af2b86126/@@download/cross_correlation_plot/ENCFF000YSL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANA ENCFF000YSL Illumina Genome Analyzer 2016-12-13T02:55:39.632994+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zyyj03695yqvv8q311kGX ENCSR376WCJ https://www.encodeproject.org/experiments/ENCSR376WCJ transcription factor IRF2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF178EJY https://www.encodeproject.org/files/ENCFF178EJY/@@download/ENCFF178EJY.bam ENCFF826PAN https://www.encodeproject.org/files/ENCFF826PAN/@@download/ENCFF826PAN.bam 31.0 M 0 30.3 M 0.979 SE 36 36 native 0.0 M 23.4 M 22.2 M 0.717 0.95 0.95 20.50 115 1.06 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/222c566c-f9cd-401a-9c0e-87a104bc1dfe/@@download/cross_correlation_plot/ENCFF002EEJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB806EAG michael-snyder:IRF2_sc-13042_K562_Rep1 ENCFF002EEJ Illumina Genome Analyzer IIx 2016-10-09T17:05:24.027192+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5q5Q0jv1v69xp00g4J2Pv ENCSR376WCJ https://www.encodeproject.org/experiments/ENCSR376WCJ transcription factor IRF2-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF057KBN https://www.encodeproject.org/files/ENCFF057KBN/@@download/ENCFF057KBN.bam ENCFF463OMQ https://www.encodeproject.org/files/ENCFF463OMQ/@@download/ENCFF463OMQ.bam 33.9 M 0 33.4 M 0.984 SE 36 36 native 0.0 M 25.9 M 24.7 M 0.727 0.95 0.96 22.80 110 1.07 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/81457edc-50dc-4f46-a689-96661b1cd95d/@@download/cross_correlation_plot/ENCFF002EEC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB222OKX michael-snyder:IRF2_sc-13042_K562_Rep3 ENCFF002EEC Illumina Genome Analyzer IIx 2016-10-09T17:05:22.761367+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5q780jv1b6Q2yZ51Zb5Gz ENCSR000EFS https://www.encodeproject.org/experiments/ENCSR000EFS transcription factor JUN-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF924CYX https://www.encodeproject.org/files/ENCFF924CYX/@@download/ENCFF924CYX.bam ENCFF156KMN https://www.encodeproject.org/files/ENCFF156KMN/@@download/ENCFF156KMN.bam 15.4 M 0 14.3 M 0.930 SE 36 36 native 0.0 M 11.1 M 9.9 M 0.644 0.90 0.90 9.49 110 1.17 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/bedc4ee3-5dec-469a-ba27-cec121ab91fb/@@download/cross_correlation_plot/ENCFF000YJJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQX ENCFF000YJJ Illumina Genome Analyzer 2016-12-11T02:16:52.047685+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163yk003690xXYVJ7Fj2f3f ENCSR000EFS https://www.encodeproject.org/experiments/ENCSR000EFS transcription factor JUN-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF014UUB https://www.encodeproject.org/files/ENCFF014UUB/@@download/ENCFF014UUB.bam ENCFF253URQ https://www.encodeproject.org/files/ENCFF253URQ/@@download/ENCFF253URQ.bam 28.4 M 0 27.8 M 0.977 SE 36 36 native 0.0 M 21.4 M 19.1 M 0.673 0.90 0.90 9.35 110 1.12 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/d57a3eb5-d725-469f-9481-4ad892a94a38/@@download/cross_correlation_plot/ENCFF000YJL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APO ENCFF000YJL Illumina Genome Analyzer 2016-12-11T02:41:23.944832+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163yy0036933PVVJ7Qq01QY ENCSR000EGH https://www.encodeproject.org/experiments/ENCSR000EGH transcription factor JUN-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF703YNU https://www.encodeproject.org/files/ENCFF703YNU/@@download/ENCFF703YNU.bam ENCFF931WZH https://www.encodeproject.org/files/ENCFF931WZH/@@download/ENCFF931WZH.bam 16.9 M 0 15.2 M 0.899 SE 36 27 27 0.0 M 10.9 M 9.0 M 0.529 0.83 0.82 5.29 125 1.17 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e80d927-84a3-478a-bcff-7984ca8c3013/@@download/cross_correlation_plot/ENCFF000YIP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQQ ENCFF000YIP Illumina Genome Analyzer 2016-12-13T03:03:40.649973+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zx1003692pJ09J76g60B3 ENCSR000EGH https://www.encodeproject.org/experiments/ENCSR000EGH transcription factor JUN-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF527CTN https://www.encodeproject.org/files/ENCFF527CTN/@@download/ENCFF527CTN.bam ENCFF790LTB https://www.encodeproject.org/files/ENCFF790LTB/@@download/ENCFF790LTB.bam 23.6 M 0 19.7 M 0.834 SE 36 27 27 0.0 M 14.1 M 9.8 M 0.414 0.70 0.68 2.86 130 1.20 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/19ff86b2-6f92-41ae-8d19-405a60e55e35/@@download/cross_correlation_plot/ENCFF000YIR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APB ENCFF000YIR Illumina Genome Analyzer 2016-12-13T03:22:41.036008+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zy6003699Z3Y8493qf2qj ENCSR000EGN https://www.encodeproject.org/experiments/ENCSR000EGN transcription factor JUND-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF400BSN https://www.encodeproject.org/files/ENCFF400BSN/@@download/ENCFF400BSN.bam ENCFF800MCM https://www.encodeproject.org/files/ENCFF800MCM/@@download/ENCFF800MCM.bam 21.3 M 0 20.5 M 0.963 SE 36 36 native 0.0 M 15.7 M 15.0 M 0.704 0.96 0.96 26.36 105 1.43 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/d83f7d69-dc53-4db4-b1c8-433db33e1f18/@@download/cross_correlation_plot/ENCFF000YSC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALZ ENCFF000YSC Illumina Genome Analyzer 2016-12-12T17:21:57.648006+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1622Kj036933PVVJ7Qq012P ENCSR000EGN https://www.encodeproject.org/experiments/ENCSR000EGN transcription factor JUND-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF321ZQU https://www.encodeproject.org/files/ENCFF321ZQU/@@download/ENCFF321ZQU.bam ENCFF624HEI https://www.encodeproject.org/files/ENCFF624HEI/@@download/ENCFF624HEI.bam 34.1 M 0 33.5 M 0.983 SE 36 36 native 0.0 M 26.5 M 24.6 M 0.721 0.93 0.94 18.40 110 1.46 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/e29a2ae3-1055-4b48-90b0-5222fc49f69c/@@download/cross_correlation_plot/ENCFF000YSE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKO ENCFF000YSE Illumina Genome Analyzer 2016-12-12T17:22:31.031529+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1622Y8036969X0jJ6p3ffJV ENCSR086FZL https://www.encodeproject.org/experiments/ENCSR086FZL transcription factor KAT8-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF707JIA https://www.encodeproject.org/files/ENCFF707JIA/@@download/ENCFF707JIA.bam ENCFF098EFO https://www.encodeproject.org/files/ENCFF098EFO/@@download/ENCFF098EFO.bam 50.4 M 0 49.4 M 0.980 PE 100 100 native 21.8 M 0.0 M 18.3 M 0.727 0.84 0.84 6.07 225 1.08 5.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/771f8860-96eb-4b4f-9433-af53dba55c2e/@@download/cross_correlation_plot/ENCFF505YGUENCFF093OLE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB849SFJ michael-snyder:L-2077 "ENCFF505YGU,ENCFF093OLE" HiSeq 2000 2016-10-09T17:37:22.617267+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bV00jv1vY92b0GYjVGBY ENCSR086FZL https://www.encodeproject.org/experiments/ENCSR086FZL transcription factor KAT8-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF578CKQ https://www.encodeproject.org/files/ENCFF578CKQ/@@download/ENCFF578CKQ.bam ENCFF569IGT https://www.encodeproject.org/files/ENCFF569IGT/@@download/ENCFF569IGT.bam 47.1 M 0 45.8 M 0.971 PE 100 100 native 20.2 M 0.0 M 16.3 M 0.692 0.81 0.80 4.95 220 1.09 6.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd4a8c6f-6e93-46e0-aa83-790d5f721639/@@download/cross_correlation_plot/ENCFF005NCEENCFF932SKI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB686JVZ michael-snyder:L-2078 "ENCFF932SKI,ENCFF005NCE" HiSeq 2000 2016-10-09T17:37:39.183846+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bXj0jv1QxJBfj5Zb2q6x ENCSR360HRA https://www.encodeproject.org/experiments/ENCSR360HRA "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF342FIU https://www.encodeproject.org/files/ENCFF342FIU/@@download/ENCFF342FIU.bam ENCFF297IPL https://www.encodeproject.org/files/ENCFF297IPL/@@download/ENCFF297IPL.bam 154.0 M 0 140.0 M 0.909 PE 100 100 native 61.1 M 0.0 M 52.3 M 0.679 0.86 0.86 6.84 210 1.06 2.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/8812b9f4-5dd0-499d-b5b5-2c3b37293a03/@@download/cross_correlation_plot/ENCFF761NMEENCFF468WZY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB990HZH michael-snyder:L-2881 "ENCFF761NME,ENCFF468WZY" HiSeq 4000 2016-10-26T21:39:13.510962+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07yF1003699pQzk2JB6K76y ENCSR360HRA https://www.encodeproject.org/experiments/ENCSR360HRA "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF042LKP https://www.encodeproject.org/files/ENCFF042LKP/@@download/ENCFF042LKP.bam ENCFF295PZT https://www.encodeproject.org/files/ENCFF295PZT/@@download/ENCFF295PZT.bam 92.1 M 0 81.6 M 0.886 PE 100 100 native 35.2 M 0.0 M 31.0 M 0.673 0.88 0.88 8.18 210 1.14 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/34537ff3-e44c-4a50-83ae-35062b2c6a47/@@download/cross_correlation_plot/ENCFF401OZYENCFF672AOW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB498HDN michael-snyder:L-2882 "ENCFF672AOW,ENCFF401OZY" HiSeq 4000 2016-10-26T21:33:26.841244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07yF4Q0369FFbbzvx9jvv50 ENCSR908CMW https://www.encodeproject.org/experiments/ENCSR908CMW "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF599IYT https://www.encodeproject.org/files/ENCFF599IYT/@@download/ENCFF599IYT.bam ENCFF392ICN https://www.encodeproject.org/files/ENCFF392ICN/@@download/ENCFF392ICN.bam 181.8 M 0 168.6 M 0.927 PE 100 100 native 73.5 M 0.0 M 65.8 M 0.724 0.90 0.90 9.47 205 1.11 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/e98e8d86-7a6c-4152-aca5-b4ddc8aa3035/@@download/cross_correlation_plot/ENCFF147CXNENCFF408SWF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB314IGB michael-snyder:L-2879 "ENCFF408SWF,ENCFF147CXN" HiSeq 4000 2016-09-16T03:27:01.578001+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyqP80369B1pgXbv4QG0Pv ENCSR908CMW https://www.encodeproject.org/experiments/ENCSR908CMW "transcription factor,chromatin remodeller,RNA binding protein" KDM1A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF008IZS https://www.encodeproject.org/files/ENCFF008IZS/@@download/ENCFF008IZS.bam ENCFF916XXF https://www.encodeproject.org/files/ENCFF916XXF/@@download/ENCFF916XXF.bam 102.8 M 0 91.0 M 0.885 PE 100 100 native 39.2 M 0.0 M 34.1 M 0.663 0.87 0.87 7.52 200 1.13 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/61a18ab1-9c48-4821-8987-7768dbddb494/@@download/cross_correlation_plot/ENCFF263QASENCFF763NMB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB115MXQ michael-snyder:L-2880 "ENCFF263QAS,ENCFF763NMB" HiSeq 4000 2016-09-16T03:21:24.458611+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyqY80369Fb155KvKP91JF ENCSR530XQI https://www.encodeproject.org/experiments/ENCSR530XQI transcription factor L3MBTL2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF856TBD https://www.encodeproject.org/files/ENCFF856TBD/@@download/ENCFF856TBD.bam ENCFF704JZA https://www.encodeproject.org/files/ENCFF704JZA/@@download/ENCFF704JZA.bam 86.9 M 0 85.3 M 0.982 PE 100 100 native 38.6 M 0.0 M 30.3 M 0.698 0.79 0.78 4.37 205 1.19 2.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/dea9e7db-c45e-4dce-9855-57e30cc9c4c5/@@download/cross_correlation_plot/ENCFF945QMWENCFF139CLF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB030YBJ michael-snyder:L-452 "ENCFF945QMW,ENCFF139CLF" HiSeq 2000 2016-10-09T17:05:12.043437+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46g80jv1f60PxyZ9JGP68 ENCSR530XQI https://www.encodeproject.org/experiments/ENCSR530XQI transcription factor L3MBTL2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF799FNR https://www.encodeproject.org/files/ENCFF799FNR/@@download/ENCFF799FNR.bam ENCFF587FKZ https://www.encodeproject.org/files/ENCFF587FKZ/@@download/ENCFF587FKZ.bam 77.9 M 0 76.7 M 0.984 PE 100 100 native 34.8 M 0.0 M 27.3 M 0.701 0.79 0.78 4.34 235 1.48 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/38cc13f7-dda1-4c88-bd7e-9ebe980391b9/@@download/cross_correlation_plot/ENCFF756MPLENCFF347VNR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB003ART michael-snyder:L-456 "ENCFF347VNR,ENCFF756MPL" HiSeq 2000 2016-10-09T17:04:18.848502+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46jj0jv1XvFGkBjjfjQJq ENCSR288MOZ https://www.encodeproject.org/experiments/ENCSR288MOZ RNA binding protein LARP7-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF518GJM https://www.encodeproject.org/files/ENCFF518GJM/@@download/ENCFF518GJM.bam ENCFF041PSY https://www.encodeproject.org/files/ENCFF041PSY/@@download/ENCFF041PSY.bam 81.5 M 0 76.5 M 0.938 PE 100 100 native 33.2 M 0.0 M 32.5 M 0.798 0.98 0.98 53.24 205 1.06 3.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2dbeba3-2093-4fb1-a585-7034153be130/@@download/cross_correlation_plot/ENCFF324CSRENCFF351HKA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB980GXV michael-snyder:L-2235 "ENCFF324CSR,ENCFF351HKA" HiSeq 2000 2016-10-09T17:16:31.632884+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40fQ0jv1XYYX2Fxk3f4xv ENCSR288MOZ https://www.encodeproject.org/experiments/ENCSR288MOZ RNA binding protein LARP7-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF076WTJ https://www.encodeproject.org/files/ENCFF076WTJ/@@download/ENCFF076WTJ.bam ENCFF469PIJ https://www.encodeproject.org/files/ENCFF469PIJ/@@download/ENCFF469PIJ.bam 63.6 M 0 62.3 M 0.980 PE 100 100 native 27.4 M 0.0 M 26.5 M 0.835 0.97 0.97 34.71 190 1.07 4.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae1b49a0-ba42-4c49-a0b6-4f85f8399e9a/@@download/cross_correlation_plot/ENCFF582HZVENCFF924YBQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB746VSG michael-snyder:L-2282 "ENCFF924YBQ,ENCFF582HZV" HiSeq 2000 2016-10-09T17:13:45.255147+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40j00jv1QxJBfj5Zb2pX2 ENCSR343ELW https://www.encodeproject.org/experiments/ENCSR343ELW transcription factor LEF1-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF178YFO https://www.encodeproject.org/files/ENCFF178YFO/@@download/ENCFF178YFO.bam ENCFF442IUC https://www.encodeproject.org/files/ENCFF442IUC/@@download/ENCFF442IUC.bam 79.6 M 0 78.6 M 0.987 PE 100 100 native 34.8 M 0.0 M 28.9 M 0.725 0.85 0.85 6.38 210 1.10 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/38cd0b95-6b8b-4d7c-9c5e-58d45e97c6a6/@@download/cross_correlation_plot/ENCFF211HMLENCFF238ZLM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB462YLN michael-snyder:L-312 "ENCFF238ZLM,ENCFF211HML" HiSeq 2000 2016-10-09T17:05:13.459678+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45ZQ0jv1xPyfX78Yz4j1f ENCSR343ELW https://www.encodeproject.org/experiments/ENCSR343ELW transcription factor LEF1-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF933HFV https://www.encodeproject.org/files/ENCFF933HFV/@@download/ENCFF933HFV.bam ENCFF994AZS https://www.encodeproject.org/files/ENCFF994AZS/@@download/ENCFF994AZS.bam 71.2 M 0 70.4 M 0.989 PE 100 100 native 31.2 M 0.0 M 27.2 M 0.765 0.88 0.88 8.32 210 1.09 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/eff2ad2a-f94c-4aa3-a711-c695c4d251c0/@@download/cross_correlation_plot/ENCFF643QTBENCFF103BRX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB949BLX michael-snyder:L-316 "ENCFF103BRX,ENCFF643QTB" HiSeq 2000 2016-10-09T17:04:29.168991+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45f00jv1XvFGkBjjfjQG1 ENCSR832OGB https://www.encodeproject.org/experiments/ENCSR832OGB transcription factor LEF1-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF605ZNL https://www.encodeproject.org/files/ENCFF605ZNL/@@download/ENCFF605ZNL.bam ENCFF467IBT https://www.encodeproject.org/files/ENCFF467IBT/@@download/ENCFF467IBT.bam 61.6 M 0 60.0 M 0.974 PE 100 100 native 26.6 M 0.0 M 21.3 M 0.691 0.80 0.80 4.73 215 1.08 5.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/966c6ef3-7f86-4ce5-b361-b9a3b5b465b9/@@download/cross_correlation_plot/ENCFF850KNYENCFF037ZGC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB736UKF michael-snyder:L-313 "ENCFF850KNY,ENCFF037ZGC" HiSeq 2000 2017-02-22T05:24:26.254311+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5bJ003693jBB7J99QFPGy ENCSR832OGB https://www.encodeproject.org/experiments/ENCSR832OGB transcription factor LEF1-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF347QZM https://www.encodeproject.org/files/ENCFF347QZM/@@download/ENCFF347QZM.bam ENCFF972DIA https://www.encodeproject.org/files/ENCFF972DIA/@@download/ENCFF972DIA.bam 66.6 M 0 65.8 M 0.987 PE 100 100 native 29.1 M 0.0 M 25.9 M 0.777 0.89 0.89 8.74 210 1.07 3.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/04dc5d47-7d29-4f42-a33b-5f7501f04295/@@download/cross_correlation_plot/ENCFF087CSKENCFF660QON.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB862OTV michael-snyder:L-317 "ENCFF660QON,ENCFF087CSK" HiSeq 2000 2017-02-22T05:24:28.546665+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2f5bV00369Pxz1G3pPgxjX2 ENCSR000EGI https://www.encodeproject.org/experiments/ENCSR000EGI transcription factor MAFF-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF097GYE https://www.encodeproject.org/files/ENCFF097GYE/@@download/ENCFF097GYE.bam ENCFF017RID https://www.encodeproject.org/files/ENCFF017RID/@@download/ENCFF017RID.bam 28.6 M 0 26.9 M 0.943 SE 36 36 native 0.0 M 20.3 M 19.4 M 0.680 0.96 0.96 25.72 130 1.15 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c527a24-58f4-4e91-8e74-ae8233b8d25b/@@download/cross_correlation_plot/ENCFF000YSQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATL ENCFF000YSQ Illumina Genome Analyzer 2016-12-11T03:22:22.795289+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164V9j0369PvYp91zK1PxBv ENCSR000EGI https://www.encodeproject.org/experiments/ENCSR000EGI transcription factor MAFF-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF589IXE https://www.encodeproject.org/files/ENCFF589IXE/@@download/ENCFF589IXE.bam ENCFF269UVL https://www.encodeproject.org/files/ENCFF269UVL/@@download/ENCFF269UVL.bam 27.4 M 0 27.1 M 0.987 SE 36 36 native 0.0 M 21.1 M 20.1 M 0.734 0.96 0.96 30.18 120 1.28 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca9da9f3-bddc-47a8-ab96-827cf3854a99/@@download/cross_correlation_plot/ENCFF000YSS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJZ ENCFF000YSS Illumina Genome Analyzer 2016-12-11T03:21:55.055508+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164VKj03697yz601ypVJ3J2 ENCSR000EGX https://www.encodeproject.org/experiments/ENCSR000EGX transcription factor MAFK-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF719OIE https://www.encodeproject.org/files/ENCFF719OIE/@@download/ENCFF719OIE.bam ENCFF762UBK https://www.encodeproject.org/files/ENCFF762UBK/@@download/ENCFF762UBK.bam 50.7 M 0 42.5 M 0.837 SE 36 36 native 0.0 M 31.1 M 30.1 M 0.593 0.97 0.97 37.75 120 1.09 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/6648ec85-5508-43e8-b5c1-0a2843e6c6a9/@@download/cross_correlation_plot/ENCFF000YUE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOF ENCFF000YUE Illumina Genome Analyzer 2016-10-09T17:34:28.289461+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bb00jv1zBYbxYJ5zzzgG ENCSR000EGX https://www.encodeproject.org/experiments/ENCSR000EGX transcription factor MAFK-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF852HSQ https://www.encodeproject.org/files/ENCFF852HSQ/@@download/ENCFF852HSQ.bam ENCFF914RBV https://www.encodeproject.org/files/ENCFF914RBV/@@download/ENCFF914RBV.bam 43.7 M 0 38.6 M 0.883 SE 36 36 native 0.0 M 29.5 M 27.2 M 0.623 0.93 0.94 16.67 130 1.22 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/a06838b9-2888-465e-9cfc-297b97e9e5c8/@@download/cross_correlation_plot/ENCFF000YUC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOG ENCFF000YUC Illumina Genome Analyzer 2016-10-09T17:34:23.296429+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bfQ0jv1XvFGkBjjfjQyX ENCSR000EFV https://www.encodeproject.org/experiments/ENCSR000EFV transcription factor MAX-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF360QBV https://www.encodeproject.org/files/ENCFF360QBV/@@download/ENCFF360QBV.bam ENCFF083GLO https://www.encodeproject.org/files/ENCFF083GLO/@@download/ENCFF083GLO.bam 24.5 M 0 24.1 M 0.985 SE 36 36 native 0.0 M 18.8 M 17.9 M 0.733 0.96 0.96 30.37 100 1.53 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/654dd941-dc17-4f6b-9259-f77d3e9d6b5b/@@download/cross_correlation_plot/ENCFF000YTF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALL ENCFF000YTF Illumina Genome Analyzer 2016-12-11T03:01:52.476232+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1646Yj03699Z3Y8493qbq1q ENCSR000EFV https://www.encodeproject.org/experiments/ENCSR000EFV transcription factor MAX-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF635HIS https://www.encodeproject.org/files/ENCFF635HIS/@@download/ENCFF635HIS.bam ENCFF844LIK https://www.encodeproject.org/files/ENCFF844LIK/@@download/ENCFF844LIK.bam 9.9 M 0 9.8 M 0.991 SE 36 36 native 0.0 M 7.6 M 7.4 M 0.750 0.97 0.97 37.96 110 1.56 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/aeed58cc-f2b9-4057-9975-2437e1c28443/@@download/cross_correlation_plot/ENCFF000YTH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AND ENCFF000YTH Illumina Genome Analyzer 2016-12-11T02:39:37.000372+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1646jQ0369F4yf5544b19JG ENCSR000EFX https://www.encodeproject.org/experiments/ENCSR000EFX "RNA binding protein,transcription factor" MAZ-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF966GGG https://www.encodeproject.org/files/ENCFF966GGG/@@download/ENCFF966GGG.bam ENCFF164ZNV https://www.encodeproject.org/files/ENCFF164ZNV/@@download/ENCFF164ZNV.bam 30.1 M 0 29.3 M 0.973 SE 36 36 native 0.0 M 22.5 M 21.9 M 0.725 0.98 0.98 41.74 100 1.11 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/5fb3822d-9550-44c0-85a4-21a5909c2557/@@download/cross_correlation_plot/ENCFF000YTS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIB ENCFF000YTS Illumina Genome Analyzer 2016-12-11T05:05:08.461426+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166G280369KQ3Yk1yz1kj14 ENCSR000EFX https://www.encodeproject.org/experiments/ENCSR000EFX "RNA binding protein,transcription factor" MAZ-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF103RBU https://www.encodeproject.org/files/ENCFF103RBU/@@download/ENCFF103RBU.bam ENCFF419IJR https://www.encodeproject.org/files/ENCFF419IJR/@@download/ENCFF419IJR.bam 26.1 M 0 25.2 M 0.966 SE 36 36 native 0.0 M 19.8 M 19.0 M 0.730 0.96 0.97 31.20 95 1.45 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1e91fce-86fd-474d-9cc0-c2a701e51105/@@download/cross_correlation_plot/ENCFF000YTU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIC ENCFF000YTU Illumina Genome Analyzer 2016-12-11T05:01:38.080213+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166G800369BJyPz9fb9qYY4 ENCSR138SFL https://www.encodeproject.org/experiments/ENCSR138SFL transcription factor MCM2-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR990AZC https://www.encodeproject.org/experiments/ENCSR990AZC transcription factor MCM3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF668FCG https://www.encodeproject.org/files/ENCFF668FCG/@@download/ENCFF668FCG.bam ENCFF642KOW https://www.encodeproject.org/files/ENCFF642KOW/@@download/ENCFF642KOW.bam 75.1 M 0 73.5 M 0.979 PE 100 100 native 32.1 M 0.0 M 31.3 M 0.833 0.98 0.97 39.92 175 1.06 2.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2b8c41a-0bc2-45de-b5a8-ece3d51668c0/@@download/cross_correlation_plot/ENCFF568RGZENCFF567PIT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB545UPC michael-snyder:L-2111 "ENCFF568RGZ,ENCFF567PIT" HiSeq 2000 2016-10-09T17:39:30.904072+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bJ00jv1xPyfX78Yz4jPQ ENCSR990AZC https://www.encodeproject.org/experiments/ENCSR990AZC transcription factor MCM3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF145NON https://www.encodeproject.org/files/ENCFF145NON/@@download/ENCFF145NON.bam ENCFF961BZW https://www.encodeproject.org/files/ENCFF961BZW/@@download/ENCFF961BZW.bam 87.1 M 0 85.4 M 0.980 PE 100 100 native 37.3 M 0.0 M 36.5 M 0.839 0.98 0.98 52.91 180 1.05 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/73f6da8e-34af-419c-b669-22c3cc827c8e/@@download/cross_correlation_plot/ENCFF721WRKENCFF501RUA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB362HCT michael-snyder:L-2112 "ENCFF721WRK,ENCFF501RUA" HiSeq 2000 2016-10-09T17:42:50.174758+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bKj0jv1xPyfX78Yz4jPj ENCSR079WHK https://www.encodeproject.org/experiments/ENCSR079WHK transcription factor MCM5-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF125HKL https://www.encodeproject.org/files/ENCFF125HKL/@@download/ENCFF125HKL.bam ENCFF505ZCU https://www.encodeproject.org/files/ENCFF505ZCU/@@download/ENCFF505ZCU.bam 48.8 M 0 47.7 M 0.978 PE 100 100 native 20.9 M 0.0 M 19.0 M 0.778 0.91 0.91 10.74 205 1.07 4.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/889bb570-30d2-464d-ad6c-af68c9dbc1bc/@@download/cross_correlation_plot/ENCFF383AYSENCFF710PPD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB071ZTO michael-snyder:L-2113 "ENCFF383AYS,ENCFF710PPD" HiSeq 2000 2016-10-09T17:37:35.817079+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4b900jv1xPyfX78Yz4jP8 ENCSR079WHK https://www.encodeproject.org/experiments/ENCSR079WHK transcription factor MCM5-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF046VNU https://www.encodeproject.org/files/ENCFF046VNU/@@download/ENCFF046VNU.bam ENCFF584NCF https://www.encodeproject.org/files/ENCFF584NCF/@@download/ENCFF584NCF.bam 51.8 M 0 50.9 M 0.982 PE 100 100 native 22.4 M 0.0 M 20.9 M 0.805 0.94 0.93 15.10 205 1.07 4.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1f08e20-2f3e-4553-89df-3bee4afc9c42/@@download/cross_correlation_plot/ENCFF447WZHENCFF238TRM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB142QTG michael-snyder:L-2114 "ENCFF238TRM,ENCFF447WZH" HiSeq 2000 2016-10-09T17:37:21.387218+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bBQ0jv1XYYX2Fxk3f5bZ ENCSR038RGL https://www.encodeproject.org/experiments/ENCSR038RGL transcription factor MCM7-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF980TTL https://www.encodeproject.org/files/ENCFF980TTL/@@download/ENCFF980TTL.bam ENCFF153NPR https://www.encodeproject.org/files/ENCFF153NPR/@@download/ENCFF153NPR.bam 48.6 M 0 47.7 M 0.980 PE 100 100 native 20.9 M 0.0 M 19.8 M 0.812 0.95 0.94 17.93 220 1.07 4.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bdb8f9d-aced-483f-b407-fb4f3e9b1303/@@download/cross_correlation_plot/ENCFF764UGYENCFF712YHQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB956UEP michael-snyder:L-2123 "ENCFF764UGY,ENCFF712YHQ" HiSeq 2000 2016-10-09T17:30:25.256456+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66280jv1XQK7ZK9053Xg1 ENCSR038RGL https://www.encodeproject.org/experiments/ENCSR038RGL transcription factor MCM7-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF245YPG https://www.encodeproject.org/files/ENCFF245YPG/@@download/ENCFF245YPG.bam ENCFF341WCH https://www.encodeproject.org/files/ENCFF341WCH/@@download/ENCFF341WCH.bam 53.4 M 0 52.5 M 0.983 PE 100 100 native 23.1 M 0.0 M 22.0 M 0.822 0.95 0.95 20.97 200 1.06 3.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/43053e51-eea7-457f-8ff6-1d58cbf2f4be/@@download/cross_correlation_plot/ENCFF224YLQENCFF736AVM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB712EEZ michael-snyder:L-2124 "ENCFF224YLQ,ENCFF736AVM" HiSeq 2000 2016-10-09T17:30:44.039962+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv664Q0jv1QkfFX8V1vJbFx ENCSR068VRA https://www.encodeproject.org/experiments/ENCSR068VRA transcription factor MCM7-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 unrunnable ENCSR542WJU https://www.encodeproject.org/experiments/ENCSR542WJU transcription factor MCM7-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF995UTD https://www.encodeproject.org/files/ENCFF995UTD/@@download/ENCFF995UTD.bam ENCFF512QAY https://www.encodeproject.org/files/ENCFF512QAY/@@download/ENCFF512QAY.bam 71.5 M 0 69.9 M 0.977 PE 100 100 native 30.5 M 0.0 M 29.9 M 0.837 0.98 0.98 55.55 195 1.05 3.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/664dd369-a22c-45fb-aab6-33dffee363b7/@@download/cross_correlation_plot/ENCFF640FTHENCFF909ZLD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB469VTS michael-snyder:L-1836 "ENCFF909ZLD,ENCFF640FTH" HiSeq 2000 2016-10-09T17:05:56.718163+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4F680jv1f60PxyZ9JGPF2 ENCSR542WJU https://www.encodeproject.org/experiments/ENCSR542WJU transcription factor MCM7-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF548AHK https://www.encodeproject.org/files/ENCFF548AHK/@@download/ENCFF548AHK.bam ENCFF853ARE https://www.encodeproject.org/files/ENCFF853ARE/@@download/ENCFF853ARE.bam 74.9 M 0 73.4 M 0.980 PE 100 100 native 32.3 M 0.0 M 31.6 M 0.844 0.98 0.98 51.81 200 1.05 2.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/75c1b3c8-35c4-4280-b540-d758395074be/@@download/cross_correlation_plot/ENCFF250AVGENCFF121ACO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB563WZL michael-snyder:L-1837 "ENCFF121ACO,ENCFF250AVG" HiSeq 2000 2016-10-09T17:04:27.326891+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4F7j0jv1vY92b0GYjVG1J ENCSR710WLO https://www.encodeproject.org/experiments/ENCSR710WLO transcription factor MGA-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF330XAC https://www.encodeproject.org/files/ENCFF330XAC/@@download/ENCFF330XAC.bam ENCFF796GXD https://www.encodeproject.org/files/ENCFF796GXD/@@download/ENCFF796GXD.bam 213.7 M 0 207.2 M 0.970 PE 100 100 native 90.4 M 0.0 M 74.1 M 0.693 0.82 0.82 5.45 225 1.12 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0e0b57e-0801-4fcb-a081-b22089a06a6b/@@download/cross_correlation_plot/ENCFF434ISCENCFF105BAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB315ZKU michael-snyder:L-1770 "ENCFF105BAY,ENCFF434ISC" HiSeq 4000 2016-09-16T03:29:30.675981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGykG00369G2Yz4yQjpqfJ4 ENCSR710WLO https://www.encodeproject.org/experiments/ENCSR710WLO transcription factor MGA-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF066JMV https://www.encodeproject.org/files/ENCFF066JMV/@@download/ENCFF066JMV.bam ENCFF099AAR https://www.encodeproject.org/files/ENCFF099AAR/@@download/ENCFF099AAR.bam 105.5 M 0 99.1 M 0.940 PE 100 100 native 43.3 M 0.0 M 32.0 M 0.607 0.74 0.74 3.76 245 1.21 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/1072cb46-f0e2-42f9-94e5-96c76096f134/@@download/cross_correlation_plot/ENCFF194JCSENCFF831HED.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB486UZD michael-snyder:L-1771 "ENCFF831HED,ENCFF194JCS" HiSeq 4000 2016-09-16T03:21:04.391708+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGykPj0369BP06Yb0qGVZJb ENCSR426MDV https://www.encodeproject.org/experiments/ENCSR426MDV transcription factor MIER1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF682OCC https://www.encodeproject.org/files/ENCFF682OCC/@@download/ENCFF682OCC.bam ENCFF940ZRQ https://www.encodeproject.org/files/ENCFF940ZRQ/@@download/ENCFF940ZRQ.bam 92.2 M 0 90.8 M 0.985 PE 100 100 native 40.1 M 0.0 M 36.5 M 0.791 0.91 0.91 10.71 230 1.07 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8cef925-9205-4552-9251-4ba454289c70/@@download/cross_correlation_plot/ENCFF391PZVENCFF060OGJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB410LKO michael-snyder:L-2057 "ENCFF391PZV,ENCFF060OGJ" HiSeq 2000 2016-10-09T17:38:26.611678+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv630j0jv1xFKXGVbpg0QFZ ENCSR426MDV https://www.encodeproject.org/experiments/ENCSR426MDV transcription factor MIER1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF639CLN https://www.encodeproject.org/files/ENCFF639CLN/@@download/ENCFF639CLN.bam ENCFF722EKW https://www.encodeproject.org/files/ENCFF722EKW/@@download/ENCFF722EKW.bam 44.5 M 0 43.5 M 0.978 PE 100 100 native 19.3 M 0.0 M 17.3 M 0.779 0.90 0.90 9.54 240 1.12 2.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a8baddd-b05c-4261-bd61-6b207c2ed59c/@@download/cross_correlation_plot/ENCFF910KPSENCFF612DVW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB381GMS michael-snyder:L-2058 "ENCFF910KPS,ENCFF612DVW" HiSeq 2000 2016-10-09T17:34:23.148249+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv632j0jv1pBzjzVx0B7f4j ENCSR107GRP https://www.encodeproject.org/experiments/ENCSR107GRP transcription factor MLLT1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF887LAD https://www.encodeproject.org/files/ENCFF887LAD/@@download/ENCFF887LAD.bam ENCFF103HMX https://www.encodeproject.org/files/ENCFF103HMX/@@download/ENCFF103HMX.bam 57.7 M 0 56.5 M 0.979 PE 100 100 native 24.6 M 0.0 M 23.6 M 0.816 0.96 0.96 22.75 180 1.17 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/38e3dba5-641a-40d1-ae49-9db2bc98f4d4/@@download/cross_correlation_plot/ENCFF994RSCENCFF755BUR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB321MJU michael-snyder:L-164 "ENCFF755BUR,ENCFF994RSC" HiSeq 2000 2016-10-09T17:38:41.346696+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4YQj0jv1XYYX2Fxk3f5Z4 ENCSR107GRP https://www.encodeproject.org/experiments/ENCSR107GRP transcription factor MLLT1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF777ZPZ https://www.encodeproject.org/files/ENCFF777ZPZ/@@download/ENCFF777ZPZ.bam ENCFF819AWT https://www.encodeproject.org/files/ENCFF819AWT/@@download/ENCFF819AWT.bam 83.6 M 0 82.0 M 0.981 PE 100 100 native 35.7 M 0.0 M 34.3 M 0.821 0.96 0.96 27.83 190 1.14 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d048324-147b-4401-aacb-04a450d065ff/@@download/cross_correlation_plot/ENCFF135KOWENCFF789UDV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB240GID michael-snyder:L-181 "ENCFF789UDV,ENCFF135KOW" HiSeq 2000 2016-10-09T17:39:53.114549+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4YX80jv1vY92b0GYjVG93 ENCSR675LRO https://www.encodeproject.org/experiments/ENCSR675LRO transcription factor MLLT1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF131XTL https://www.encodeproject.org/files/ENCFF131XTL/@@download/ENCFF131XTL.bam ENCFF701CLT https://www.encodeproject.org/files/ENCFF701CLT/@@download/ENCFF701CLT.bam 63.3 M 0 62.1 M 0.981 PE 100 100 native 27.1 M 0.0 M 26.1 M 0.826 0.97 0.97 29.28 190 1.08 3.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/0461eed1-196c-48b3-9afc-4b6134aeb809/@@download/cross_correlation_plot/ENCFF826AKYENCFF299YIC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB314WBY michael-snyder:L-163 "ENCFF826AKY,ENCFF299YIC" HiSeq 2000 2016-10-09T17:06:21.224586+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Kg80jv1XYYX2Fxk3f6Fp ENCSR675LRO https://www.encodeproject.org/experiments/ENCSR675LRO transcription factor MLLT1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF353XMB https://www.encodeproject.org/files/ENCFF353XMB/@@download/ENCFF353XMB.bam ENCFF084FTC https://www.encodeproject.org/files/ENCFF084FTC/@@download/ENCFF084FTC.bam 60.5 M 0 59.3 M 0.981 PE 100 100 native 26.0 M 0.0 M 25.2 M 0.834 0.97 0.97 35.31 180 1.10 3.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/d58a8a2b-a126-4c7f-a0f3-041ee2d56adc/@@download/cross_correlation_plot/ENCFF745PCHENCFF050YVZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB155HWK michael-snyder:L-180 "ENCFF050YVZ,ENCFF745PCH" HiSeq 2000 2016-10-09T17:05:38.398135+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6KkQ0jv1QxJBfj5Zb2q9Y ENCSR390VGH https://www.encodeproject.org/experiments/ENCSR390VGH transcription factor MNT-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF803TYM https://www.encodeproject.org/files/ENCFF803TYM/@@download/ENCFF803TYM.bam ENCFF398EEB https://www.encodeproject.org/files/ENCFF398EEB/@@download/ENCFF398EEB.bam 86.4 M 0 82.9 M 0.960 PE 100 100 native 36.2 M 0.0 M 25.8 M 0.597 0.71 0.72 3.54 205 1.25 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/fad44d33-b512-4396-8f67-57f0253ea744/@@download/cross_correlation_plot/ENCFF514ZDJENCFF249PNP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB744RBK michael-snyder:L-2958 "ENCFF249PNP,ENCFF514ZDJ" HiSeq 4000 2016-12-07T18:39:07.002127+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13X75Q03691Pqx659jbbK0x ENCSR390VGH https://www.encodeproject.org/experiments/ENCSR390VGH transcription factor MNT-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF698VVG https://www.encodeproject.org/files/ENCFF698VVG/@@download/ENCFF698VVG.bam ENCFF960KBQ https://www.encodeproject.org/files/ENCFF960KBQ/@@download/ENCFF960KBQ.bam 99.7 M 0 96.2 M 0.965 PE 100 100 native 41.9 M 0.0 M 28.1 M 0.563 0.67 0.67 3.09 255 1.28 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e4afc05-eddf-4c3f-aeb7-a6ea0c0cb298/@@download/cross_correlation_plot/ENCFF756SROENCFF615SHE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB679AQM michael-snyder:L-2959 "ENCFF756SRO,ENCFF615SHE" HiSeq 4000 2016-12-07T18:39:43.906413+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13X7J803696Fp2759YJGkfP ENCSR512NLO https://www.encodeproject.org/experiments/ENCSR512NLO transcription factor MNT-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF911BGV https://www.encodeproject.org/files/ENCFF911BGV/@@download/ENCFF911BGV.bam ENCFF921KHT https://www.encodeproject.org/files/ENCFF921KHT/@@download/ENCFF921KHT.bam 59.9 M 0 58.8 M 0.981 PE 100 100 native 25.9 M 0.0 M 22.8 M 0.761 0.88 0.88 8.31 220 1.21 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/18d6c0a6-80b1-495f-be73-3bc74e2ff4c4/@@download/cross_correlation_plot/ENCFF642JVDENCFF196AKS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB153XIV michael-snyder:L-1676 "ENCFF642JVD,ENCFF196AKS" HiSeq 2000 2017-05-05T21:43:57.277799+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vJQ03698KGf370q9770y ENCSR512NLO https://www.encodeproject.org/experiments/ENCSR512NLO transcription factor MNT-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF767FRB https://www.encodeproject.org/files/ENCFF767FRB/@@download/ENCFF767FRB.bam ENCFF153SPR https://www.encodeproject.org/files/ENCFF153SPR/@@download/ENCFF153SPR.bam 53.9 M 0 52.9 M 0.981 PE 100 100 native 23.3 M 0.0 M 19.2 M 0.711 0.83 0.82 5.51 215 1.20 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f2ef1c9-92f1-487a-bf95-f2bd23a2924a/@@download/cross_correlation_plot/ENCFF244ECJENCFF335ZAN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB230CRX michael-snyder:L-1677 "ENCFF335ZAN,ENCFF244ECJ" HiSeq 2000 2017-05-05T21:15:07.263597+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469vVQ0369JxZVj70Jj0Bvv ENCSR979QYJ https://www.encodeproject.org/experiments/ENCSR979QYJ transcription factor MNT-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF358HOW https://www.encodeproject.org/files/ENCFF358HOW/@@download/ENCFF358HOW.bam ENCFF572ZQQ https://www.encodeproject.org/files/ENCFF572ZQQ/@@download/ENCFF572ZQQ.bam 107.6 M 0 103.1 M 0.958 PE 100 100 native 45.1 M 0.0 M 31.8 M 0.590 0.71 0.71 3.49 220 1.13 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/95690452-465d-41a7-bf61-ad459c9cb9a8/@@download/cross_correlation_plot/ENCFF678PWCENCFF627YOB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB226MVW michael-snyder:L-2956 "ENCFF627YOB,ENCFF678PWC" HiSeq 4000 2016-12-07T18:40:51.770993+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13X7bj0369G8vjB4F09xPpy ENCSR979QYJ https://www.encodeproject.org/experiments/ENCSR979QYJ transcription factor MNT-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF036IOO https://www.encodeproject.org/files/ENCFF036IOO/@@download/ENCFF036IOO.bam ENCFF291YBA https://www.encodeproject.org/files/ENCFF291YBA/@@download/ENCFF291YBA.bam 104.4 M 0 101.3 M 0.971 PE 100 100 native 44.0 M 0.0 M 25.5 M 0.489 0.58 0.58 2.43 255 1.13 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d16d636-2107-4e2c-9f17-eedd79249f9f/@@download/cross_correlation_plot/ENCFF911ICFENCFF393ZLC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB949TNV michael-snyder:L-2957 "ENCFF911ICF,ENCFF393ZLC" HiSeq 4000 2016-12-07T18:39:20.242237+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13X7xj03698KZ5p4BY9z66X ENCSR000EHM https://www.encodeproject.org/experiments/ENCSR000EHM control mouse-IgG-control-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF715JBE https://www.encodeproject.org/files/ENCFF715JBE/@@download/ENCFF715JBE.bam ENCFF368JQX https://www.encodeproject.org/files/ENCFF368JQX/@@download/ENCFF368JQX.bam 18.1 M 0 15.9 M 0.880 SE 28 28 native 0.0 M 11.6 M 10.9 M 0.602 0.94 0.94 16.58 105 1.03 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6521021-2e27-49de-a9c2-eab604beee98/@@download/cross_correlation_plot/ENCFF000YQB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOA ENCFF000YQB Illumina Genome Analyzer 2016-10-26T17:36:27.706152+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082fY803698JBzYyJKPZBjj ENCSR000EHM https://www.encodeproject.org/experiments/ENCSR000EHM control mouse-IgG-control-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF156NSV https://www.encodeproject.org/files/ENCFF156NSV/@@download/ENCFF156NSV.bam ENCFF648WLU https://www.encodeproject.org/files/ENCFF648WLU/@@download/ENCFF648WLU.bam 19.3 M 0 17.2 M 0.891 SE 28 28 native 0.0 M 12.5 M 11.8 M 0.611 0.94 0.94 18.13 105 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f00fccb-ba98-4edc-952e-ff1986817e8c/@@download/cross_correlation_plot/ENCFF000YQC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATB ENCFF000YQC Illumina Genome Analyzer 2016-10-26T17:36:29.971946+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082fgj03692g2Q4k5K0j91G ENCSR807BGP https://www.encodeproject.org/experiments/ENCSR807BGP transcription factor MTA1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF241GJI https://www.encodeproject.org/files/ENCFF241GJI/@@download/ENCFF241GJI.bam ENCFF852HQJ https://www.encodeproject.org/files/ENCFF852HQJ/@@download/ENCFF852HQJ.bam 52.9 M 0 51.8 M 0.978 PE 100 100 native 22.6 M 0.0 M 21.0 M 0.792 0.93 0.93 13.82 200 1.20 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/a24de28d-234f-4366-b325-e17136cadff0/@@download/cross_correlation_plot/ENCFF434PLOENCFF139SOU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB732NWZ michael-snyder:L-1697 "ENCFF139SOU,ENCFF434PLO" HiSeq 2000 2017-05-05T08:35:16.712342+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yqY003699xk39703jJkZb ENCSR807BGP https://www.encodeproject.org/experiments/ENCSR807BGP transcription factor MTA1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF647FZE https://www.encodeproject.org/files/ENCFF647FZE/@@download/ENCFF647FZE.bam ENCFF838ZKA https://www.encodeproject.org/files/ENCFF838ZKA/@@download/ENCFF838ZKA.bam 62.9 M 0 61.6 M 0.980 PE 100 100 native 26.9 M 0.0 M 25.1 M 0.799 0.93 0.93 14.74 200 1.11 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/49315ab0-381f-454c-a4c1-0cd40665b04f/@@download/cross_correlation_plot/ENCFF638OLJENCFF032QDB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB573EWI michael-snyder:L-1701 "ENCFF032QDB,ENCFF638OLJ" HiSeq 2000 2017-05-05T09:48:28.882695+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yqfQ0369JxZVj70Jj069f ENCSR113LAS https://www.encodeproject.org/experiments/ENCSR113LAS transcription factor MTA2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF254IUH https://www.encodeproject.org/files/ENCFF254IUH/@@download/ENCFF254IUH.bam ENCFF509PAP https://www.encodeproject.org/files/ENCFF509PAP/@@download/ENCFF509PAP.bam 41.2 M 0 40.0 M 0.971 PE 100 100 native 17.5 M 0.0 M 16.0 M 0.776 0.92 0.92 11.76 185 1.25 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/fbcdb00a-9cc9-431e-bc87-f18107384e1f/@@download/cross_correlation_plot/ENCFF697STRENCFF766QOB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB281FLC michael-snyder:L-166 "ENCFF697STR,ENCFF766QOB" HiSeq 2000 2016-10-09T17:34:16.851188+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv629j0jv1Zx550yGy68YYv ENCSR113LAS https://www.encodeproject.org/experiments/ENCSR113LAS transcription factor MTA2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF167NVK https://www.encodeproject.org/files/ENCFF167NVK/@@download/ENCFF167NVK.bam ENCFF158BEJ https://www.encodeproject.org/files/ENCFF158BEJ/@@download/ENCFF158BEJ.bam 38.1 M 0 37.3 M 0.980 PE 100 100 native 16.5 M 0.0 M 15.6 M 0.819 0.95 0.95 19.46 185 1.29 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/67e86ed3-4c7a-476d-acef-d3c6c576231d/@@download/cross_correlation_plot/ENCFF887TWQENCFF374EZV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB820SCT michael-snyder:L-183 "ENCFF374EZV,ENCFF887TWQ" HiSeq 2000 2016-10-09T17:34:38.865708+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62G00jv1k8yv12k9xk5gv ENCSR411UYA https://www.encodeproject.org/experiments/ENCSR411UYA transcription factor MTA2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF750EKT https://www.encodeproject.org/files/ENCFF750EKT/@@download/ENCFF750EKT.bam ENCFF884PHH https://www.encodeproject.org/files/ENCFF884PHH/@@download/ENCFF884PHH.bam 57.6 M 0 56.5 M 0.982 PE 100 100 native 24.7 M 0.0 M 23.3 M 0.810 0.95 0.95 18.64 185 1.11 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/36c1a995-9dcf-42d7-a3b3-c8295c556407/@@download/cross_correlation_plot/ENCFF693GDAENCFF259AYK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB922EBZ michael-snyder:L-165 "ENCFF693GDA,ENCFF259AYK" HiSeq 2000 2016-10-09T17:12:32.136524+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gB80jv1zBYbxYJ5zzyqx ENCSR411UYA https://www.encodeproject.org/experiments/ENCSR411UYA transcription factor MTA2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF563DGZ https://www.encodeproject.org/files/ENCFF563DGZ/@@download/ENCFF563DGZ.bam ENCFF783HJX https://www.encodeproject.org/files/ENCFF783HJX/@@download/ENCFF783HJX.bam 51.5 M 0 50.7 M 0.984 PE 100 100 native 22.2 M 0.0 M 21.4 M 0.830 0.97 0.97 28.50 200 1.10 2.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/71028fec-1ad9-4134-8f38-5f521ad4e908/@@download/cross_correlation_plot/ENCFF693CFRENCFF238FNW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB262OYC michael-snyder:L-182 "ENCFF238FNW,ENCFF693CFR" HiSeq 2000 2016-10-09T17:12:20.664801+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gFQ0jv1zBYbxYJ5zzyv5 ENCSR914NEI https://www.encodeproject.org/experiments/ENCSR914NEI transcription factor MTA3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF560QOE https://www.encodeproject.org/files/ENCFF560QOE/@@download/ENCFF560QOE.bam ENCFF061FRE https://www.encodeproject.org/files/ENCFF061FRE/@@download/ENCFF061FRE.bam 85.3 M 0 79.9 M 0.937 PE 100 100 native 35.9 M 0.0 M 30.8 M 0.723 0.86 0.86 7.52 235 1.13 2.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/c25f5644-d95e-4be8-bbd9-b56a99651267/@@download/cross_correlation_plot/ENCFF002EFWENCFF002DPG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB056KZR michael-snyder:705_B_TruSeq_TGACCA "ENCFF002DPG,ENCFF002EFW" HiSeq 2000 2017-03-03T17:57:43.607373+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKk8j036933fj85pZ427zV ENCSR914NEI https://www.encodeproject.org/experiments/ENCSR914NEI transcription factor MTA3-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF508SQK https://www.encodeproject.org/files/ENCFF508SQK/@@download/ENCFF508SQK.bam ENCFF408PVR https://www.encodeproject.org/files/ENCFF408PVR/@@download/ENCFF408PVR.bam 74.7 M 0 73.9 M 0.989 PE 101 101 native 33.3 M 0.0 M 31.6 M 0.845 0.95 0.95 19.40 160 1.10 2.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/00e1b11c-381d-467e-b012-2f54bda8e9ce/@@download/cross_correlation_plot/ENCFF894NUIENCFF809IJU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB143OZQ "ENCFF809IJU,ENCFF894NUI" HiSeq 2000 2017-03-03T17:56:22.531546+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKkK803693zfzy122BqVG0 ENCSR000EGZ https://www.encodeproject.org/experiments/ENCSR000EGZ transcription factor MXI1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF388QNA https://www.encodeproject.org/files/ENCFF388QNA/@@download/ENCFF388QNA.bam ENCFF322OYY https://www.encodeproject.org/files/ENCFF322OYY/@@download/ENCFF322OYY.bam 28.1 M 0 24.8 M 0.881 SE 36 36 native 0.0 M 18.7 M 17.8 M 0.633 0.96 0.96 22.45 105 1.05 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/ffb647cf-df1c-458e-90f6-e8b06372e736/@@download/cross_correlation_plot/ENCFF000YUK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ASZ ENCFF000YUK Illumina Genome Analyzer 2016-12-11T03:06:59.323986+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1648q80369Bxb30J6x5bZGF ENCSR000EGZ https://www.encodeproject.org/experiments/ENCSR000EGZ transcription factor MXI1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF726UVN https://www.encodeproject.org/files/ENCFF726UVN/@@download/ENCFF726UVN.bam ENCFF260VIR https://www.encodeproject.org/files/ENCFF260VIR/@@download/ENCFF260VIR.bam 27.5 M 0 23.5 M 0.857 SE 36 36 native 0.0 M 18.1 M 16.0 M 0.581 0.88 0.88 8.20 130 1.07 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/aac216f8-8440-47d7-8363-95f96b9d358b/@@download/cross_correlation_plot/ENCFF000YUJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APH ENCFF000YUJ Illumina Genome Analyzer 2016-12-11T03:05:10.371048+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16490Q0369BJyPz9fb9qY01 ENCSR425THE https://www.encodeproject.org/experiments/ENCSR425THE transcription factor MYBL2-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR000EGJ https://www.encodeproject.org/experiments/ENCSR000EGJ transcription factor MYC-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF641HZR https://www.encodeproject.org/files/ENCFF641HZR/@@download/ENCFF641HZR.bam ENCFF191PXA https://www.encodeproject.org/files/ENCFF191PXA/@@download/ENCFF191PXA.bam 24.1 M 0 21.8 M 0.904 SE 36 36 native 0.0 M 17.0 M 15.7 M 0.651 0.92 0.92 13.45 105 1.46 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/62756ed7-05bb-4e5b-b61a-b7841952e682/@@download/cross_correlation_plot/ENCFF000YKO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOY ENCFF000YKO Illumina Genome Analyzer 2016-12-11T03:22:04.880541+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Y8j0369GF0YB1zjPf6bz ENCSR000EGJ https://www.encodeproject.org/experiments/ENCSR000EGJ transcription factor MYC-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF006GQZ https://www.encodeproject.org/files/ENCFF006GQZ/@@download/ENCFF006GQZ.bam ENCFF936GCU https://www.encodeproject.org/files/ENCFF936GCU/@@download/ENCFF936GCU.bam 28.5 M 0 26.8 M 0.940 SE 36 36 native 0.0 M 20.9 M 19.2 M 0.674 0.92 0.92 12.85 110 1.19 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/184c467b-a72f-4177-9fcd-5e1a0318252b/@@download/cross_correlation_plot/ENCFF000YKR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEQ ENCFF000YKR Illumina Genome Analyzer 2016-12-11T03:28:33.465778+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164YJj03693J2XX63yZ7F08 ENCSR000EGS https://www.encodeproject.org/experiments/ENCSR000EGS transcription factor MYC-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF239WGU https://www.encodeproject.org/files/ENCFF239WGU/@@download/ENCFF239WGU.bam ENCFF207JFR https://www.encodeproject.org/files/ENCFF207JFR/@@download/ENCFF207JFR.bam 26.8 M 0 19.8 M 0.738 SE 36 27 27 0.0 M 13.3 M 12.7 M 0.474 0.96 0.96 24.25 100 1.24 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/34c5ee94-9135-47dc-9a79-59c6f90bd9e0/@@download/cross_correlation_plot/ENCFF000YKZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOK ENCFF000YKZ Illumina Genome Analyzer 2017-02-24T16:17:24.692959+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gb84803691jF9jFjv0J0z9 ENCSR000EGS https://www.encodeproject.org/experiments/ENCSR000EGS transcription factor MYC-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF836IMK https://www.encodeproject.org/files/ENCFF836IMK/@@download/ENCFF836IMK.bam ENCFF229LOS https://www.encodeproject.org/files/ENCFF229LOS/@@download/ENCFF229LOS.bam 23.9 M 0 22.2 M 0.927 SE 36 27 27 0.0 M 16.3 M 15.1 M 0.632 0.93 0.94 18.00 110 1.87 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab74972f-1f70-4c59-912d-5db2a29e27a7/@@download/cross_correlation_plot/ENCFF000YLA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEH ENCFF000YLA Illumina Genome Analyzer 2017-02-24T16:17:49.609017+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gb8BQ03695fz0jGqG6g2G8 ENCSR085QEV https://www.encodeproject.org/experiments/ENCSR085QEV transcription factor NBN-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF397LNB https://www.encodeproject.org/files/ENCFF397LNB/@@download/ENCFF397LNB.bam ENCFF732ZCF https://www.encodeproject.org/files/ENCFF732ZCF/@@download/ENCFF732ZCF.bam 49.2 M 0 48.4 M 0.983 PE 100 100 native 21.2 M 0.0 M 19.1 M 0.778 0.90 0.90 10.22 205 1.12 2.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb255ec2-61ab-4dd0-948c-bf19ca206aa5/@@download/cross_correlation_plot/ENCFF854CCCENCFF881JDL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB619XMM michael-snyder:L-287 "ENCFF854CCC,ENCFF881JDL" HiSeq 2000 2016-10-09T17:06:01.674613+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4K300jv1XvFGkBjjfjQfZ ENCSR085QEV https://www.encodeproject.org/experiments/ENCSR085QEV transcription factor NBN-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF700WSI https://www.encodeproject.org/files/ENCFF700WSI/@@download/ENCFF700WSI.bam ENCFF106JJJ https://www.encodeproject.org/files/ENCFF106JJJ/@@download/ENCFF106JJJ.bam 77.8 M 0 76.2 M 0.980 PE 100 100 native 33.0 M 0.0 M 29.2 M 0.751 0.89 0.89 8.58 190 1.08 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/36e07950-338c-4924-8609-61c144676636/@@download/cross_correlation_plot/ENCFF321LCCENCFF581MDG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB817KEF michael-snyder:L-291 "ENCFF321LCC,ENCFF581MDG" HiSeq 2000 2016-10-09T17:11:34.046311+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4K4Q0jv1zBYbxYJ5zzzQ6 ENCSR931HNY https://www.encodeproject.org/experiments/ENCSR931HNY transcription factor NCOA1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF427CAA https://www.encodeproject.org/files/ENCFF427CAA/@@download/ENCFF427CAA.bam ENCFF941FBC https://www.encodeproject.org/files/ENCFF941FBC/@@download/ENCFF941FBC.bam 38.1 M 0 34.3 M 0.900 PE 100 100 native 14.8 M 0.0 M 13.5 M 0.707 0.91 0.91 11.02 210 1.16 2.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/249f6354-e88b-41dd-b885-5193ab637d99/@@download/cross_correlation_plot/ENCFF137DWPENCFF033TZD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB964OKL michael-snyder:L-1990 "ENCFF033TZD,ENCFF137DWP" HiSeq 2000 2016-10-09T17:02:50.894649+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49980jv1xPyfX78Yz4j4K ENCSR931HNY https://www.encodeproject.org/experiments/ENCSR931HNY transcription factor NCOA1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF314PZG https://www.encodeproject.org/files/ENCFF314PZG/@@download/ENCFF314PZG.bam ENCFF814XIO https://www.encodeproject.org/files/ENCFF814XIO/@@download/ENCFF814XIO.bam 47.6 M 0 44.2 M 0.929 PE 100 100 native 19.4 M 0.0 M 18.6 M 0.783 0.96 0.96 25.29 215 1.16 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c3b3e27-7411-4d46-a1e4-0c39a4022666/@@download/cross_correlation_plot/ENCFF165NJFENCFF226TLO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB652PHI michael-snyder:L-1991 "ENCFF226TLO,ENCFF165NJF" HiSeq 2000 2016-10-09T17:03:24.698621+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49Bj0jv1QxJBfj5Zb2pq0 ENCSR168CEE https://www.encodeproject.org/experiments/ENCSR168CEE transcription factor NCOA6-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF910GRL https://www.encodeproject.org/files/ENCFF910GRL/@@download/ENCFF910GRL.bam ENCFF036PMT https://www.encodeproject.org/files/ENCFF036PMT/@@download/ENCFF036PMT.bam 103.3 M 0 85.8 M 0.830 PE 100 100 native 37.0 M 0.0 M 32.2 M 0.623 0.87 0.87 7.63 205 1.07 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/5bd4faca-932c-496a-a3d7-a3c9381274c4/@@download/cross_correlation_plot/ENCFF956KKUENCFF957QWK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB969PLT michael-snyder:L-2885 "ENCFF957QWK,ENCFF956KKU" HiSeq 4000 2016-09-16T03:22:08.547479+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyV2Q036994Jx4PVBXKXq5 ENCSR168CEE https://www.encodeproject.org/experiments/ENCSR168CEE transcription factor NCOA6-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF362KOB https://www.encodeproject.org/files/ENCFF362KOB/@@download/ENCFF362KOB.bam ENCFF847DHJ https://www.encodeproject.org/files/ENCFF847DHJ/@@download/ENCFF847DHJ.bam 94.9 M 0 80.9 M 0.852 PE 100 100 native 34.9 M 0.0 M 29.1 M 0.614 0.84 0.83 5.87 220 1.07 3.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/de6ff0c4-d60d-437e-99cc-5ac9ad916bc0/@@download/cross_correlation_plot/ENCFF666XKIENCFF059NSA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB082ZYY michael-snyder:L-2886 "ENCFF666XKI,ENCFF059NSA" HiSeq 4000 2016-09-16T03:21:44.604741+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyV5Q0369BvpJbQkBjPZFz ENCSR298JCG https://www.encodeproject.org/experiments/ENCSR298JCG "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF488BQX https://www.encodeproject.org/files/ENCFF488BQX/@@download/ENCFF488BQX.bam ENCFF905LBF https://www.encodeproject.org/files/ENCFF905LBF/@@download/ENCFF905LBF.bam 51.2 M 0 50.1 M 0.979 PE 100 100 native 22.2 M 0.0 M 20.7 M 0.810 0.94 0.94 15.29 220 1.08 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/b172f29d-5e17-473c-901b-a8686d132f77/@@download/cross_correlation_plot/ENCFF979ZZFENCFF253UMC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB229LKR michael-snyder:L-1857 "ENCFF979ZZF,ENCFF253UMC" HiSeq 2000 2016-10-27T22:25:39.436792+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bgQj03697KPkyX9BPQF2q ENCSR298JCG https://www.encodeproject.org/experiments/ENCSR298JCG "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF247FGI https://www.encodeproject.org/files/ENCFF247FGI/@@download/ENCFF247FGI.bam ENCFF456UFJ https://www.encodeproject.org/files/ENCFF456UFJ/@@download/ENCFF456UFJ.bam 46.7 M 0 45.6 M 0.976 PE 100 100 native 20.2 M 0.0 M 18.7 M 0.801 0.93 0.93 13.54 220 1.08 3.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bf2fcee-0fe8-4c7d-a746-1ade81162fc6/@@download/cross_correlation_plot/ENCFF417KCIENCFF241ADB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB844VLU michael-snyder:L-1858 "ENCFF241ADB,ENCFF417KCI" HiSeq 2000 2016-10-27T22:25:04.625132+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bgZ00369GJ6xQfbB7F5vf ENCSR798ILC https://www.encodeproject.org/experiments/ENCSR798ILC "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF033JFM https://www.encodeproject.org/files/ENCFF033JFM/@@download/ENCFF033JFM.bam ENCFF059UBN https://www.encodeproject.org/files/ENCFF059UBN/@@download/ENCFF059UBN.bam 41.4 M 0 40.5 M 0.978 PE 100 100 native 17.9 M 0.0 M 16.4 M 0.791 0.92 0.92 12.06 210 1.40 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/600d2ec8-aa01-4409-a054-ca93b357164e/@@download/cross_correlation_plot/ENCFF455UQAENCFF714KWX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB829ZPM michael-snyder:L-1726 "ENCFF455UQA,ENCFF714KWX" HiSeq 2000 2016-09-07T16:34:15.625909+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz7bjv00369K8fzV21yYP237 ENCSR798ILC https://www.encodeproject.org/experiments/ENCSR798ILC "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF072KEJ https://www.encodeproject.org/files/ENCFF072KEJ/@@download/ENCFF072KEJ.bam ENCFF694HJF https://www.encodeproject.org/files/ENCFF694HJF/@@download/ENCFF694HJF.bam 48.2 M 0 47.3 M 0.982 PE 100 100 native 20.8 M 0.0 M 18.8 M 0.781 0.91 0.91 10.42 210 1.43 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/d79755bb-c9f5-4ff9-bf75-4261eef1d7f3/@@download/cross_correlation_plot/ENCFF268XRYENCFF642TLW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB732JMK michael-snyder:L-1727 "ENCFF268XRY,ENCFF642TLW" HiSeq 2000 2016-09-07T16:34:48.005276+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz7bjz803693JjKQB1yzv775 ENCSR910JAI https://www.encodeproject.org/experiments/ENCSR910JAI "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF129RYE https://www.encodeproject.org/files/ENCFF129RYE/@@download/ENCFF129RYE.bam ENCFF484LPC https://www.encodeproject.org/files/ENCFF484LPC/@@download/ENCFF484LPC.bam 138.6 M 0 133.3 M 0.961 PE 100 100 native 58.4 M 0.0 M 49.6 M 0.716 0.85 0.85 6.68 185 1.14 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ec5a241-712a-45ce-9b63-015f3be7386b/@@download/cross_correlation_plot/ENCFF224PWBENCFF337XLT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB309ZUD michael-snyder:L-2974 "ENCFF224PWB,ENCFF337XLT" HiSeq 4000 2016-11-02T23:16:55.433163+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbGBQ0369448Z3JGpJkKb4 ENCSR910JAI https://www.encodeproject.org/experiments/ENCSR910JAI "transcription factor,chromatin remodeller" NCOR1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF420DGT https://www.encodeproject.org/files/ENCFF420DGT/@@download/ENCFF420DGT.bam ENCFF420TEY https://www.encodeproject.org/files/ENCFF420TEY/@@download/ENCFF420TEY.bam 104.3 M 0 101.0 M 0.968 PE 100 100 native 43.9 M 0.0 M 34.0 M 0.652 0.78 0.77 4.41 195 1.28 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb79b916-a03a-45e3-9873-df4bda627ed6/@@download/cross_correlation_plot/ENCFF443EYGENCFF435JEO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB984CDI michael-snyder:L-2975 "ENCFF435JEO,ENCFF443EYG" HiSeq 4000 2016-11-02T23:13:24.200650+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbJQQ0369PJxfVGQp32BFf ENCSR796ITY https://www.encodeproject.org/experiments/ENCSR796ITY transcription factor NFIC-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF272DYC https://www.encodeproject.org/files/ENCFF272DYC/@@download/ENCFF272DYC.bam ENCFF212AKE https://www.encodeproject.org/files/ENCFF212AKE/@@download/ENCFF212AKE.bam 164.9 M 0 160.8 M 0.975 PE 100 100 native 71.7 M 0.0 M 61.3 M 0.743 0.86 0.86 7.07 175 1.29 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c0ee924-3e27-4fea-9b1e-614139be5b83/@@download/cross_correlation_plot/ENCFF534ZOYENCFF077ONG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB244LCH michael-snyder:L-2304 "ENCFF534ZOY,ENCFF077ONG" HiSeq 4000 2016-10-27T22:25:11.169164+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bxFQ0369GJ6xQfbB7F61Q ENCSR796ITY https://www.encodeproject.org/experiments/ENCSR796ITY transcription factor NFIC-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF059AYM https://www.encodeproject.org/files/ENCFF059AYM/@@download/ENCFF059AYM.bam ENCFF753EXC https://www.encodeproject.org/files/ENCFF753EXC/@@download/ENCFF753EXC.bam 140.9 M 0 137.3 M 0.974 PE 100 100 native 60.4 M 0.0 M 51.3 M 0.728 0.85 0.85 6.45 210 1.44 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/9577caba-775d-4597-b416-da007bf5f1da/@@download/cross_correlation_plot/ENCFF439DZEENCFF456ASW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB642HDH michael-snyder:L-2305 "ENCFF439DZE,ENCFF456ASW" HiSeq 4000 2016-10-27T22:24:02.800668+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bxP8036923z1QYVBPp854 ENCSR657EOF https://www.encodeproject.org/experiments/ENCSR657EOF transcription factor NFRKB-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF437UWB https://www.encodeproject.org/files/ENCFF437UWB/@@download/ENCFF437UWB.bam ENCFF949DRZ https://www.encodeproject.org/files/ENCFF949DRZ/@@download/ENCFF949DRZ.bam 37.2 M 0 36.5 M 0.981 PE 100 100 native 15.8 M 0.0 M 15.3 M 0.822 0.97 0.97 28.54 210 1.16 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1085698-f2f2-4bf2-b5db-1f98d26aec15/@@download/cross_correlation_plot/ENCFF705WPLENCFF139VNK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB364GTX michael-snyder:L-1776 "ENCFF705WPL,ENCFF139VNK" HiSeq 2000 2016-10-09T17:34:31.735256+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61000jv1f60PxyZ9JGPbj ENCSR657EOF https://www.encodeproject.org/experiments/ENCSR657EOF transcription factor NFRKB-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF530UEA https://www.encodeproject.org/files/ENCFF530UEA/@@download/ENCFF530UEA.bam ENCFF608FVU https://www.encodeproject.org/files/ENCFF608FVU/@@download/ENCFF608FVU.bam 31.6 M 0 30.9 M 0.980 PE 100 100 native 13.6 M 0.0 M 13.2 M 0.836 0.97 0.97 33.82 210 1.16 2.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b48bbfe-e6fc-4517-9bbc-0170f88d5dd0/@@download/cross_correlation_plot/ENCFF340VHIENCFF710XSY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB547SPX michael-snyder:L-1777 "ENCFF710XSY,ENCFF340VHI" HiSeq 2000 2016-10-09T17:34:17.397868+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61280jv1XYYX2Fxk3f69b ENCSR085DDI https://www.encodeproject.org/experiments/ENCSR085DDI transcription factor NFXL1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF318SPV https://www.encodeproject.org/files/ENCFF318SPV/@@download/ENCFF318SPV.bam ENCFF390DUS https://www.encodeproject.org/files/ENCFF390DUS/@@download/ENCFF390DUS.bam 63.4 M 0 60.5 M 0.955 PE 100 100 native 26.5 M 0.0 M 25.6 M 0.807 0.96 0.96 28.19 200 1.07 3.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b14faa7-ef7d-4688-b465-980481bd00d8/@@download/cross_correlation_plot/ENCFF358LFLENCFF575GFV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB191LFO michael-snyder:L-2043 "ENCFF358LFL,ENCFF575GFV" HiSeq 2000 2016-10-09T17:14:14.776590+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vGj0jv1f60PxyZ9JGKxq ENCSR085DDI https://www.encodeproject.org/experiments/ENCSR085DDI transcription factor NFXL1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF833ZOK https://www.encodeproject.org/files/ENCFF833ZOK/@@download/ENCFF833ZOK.bam ENCFF484ZNM https://www.encodeproject.org/files/ENCFF484ZNM/@@download/ENCFF484ZNM.bam 50.5 M 0 48.3 M 0.955 PE 100 100 native 21.2 M 0.0 M 20.5 M 0.810 0.96 0.96 27.30 210 1.09 3.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab772488-5250-4b71-aa11-9bd78b129e8f/@@download/cross_correlation_plot/ENCFF277SWUENCFF197EBM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB322GCM michael-snyder:L-2044 "ENCFF197EBM,ENCFF277SWU" HiSeq 2000 2016-10-09T17:13:15.073821+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vK80jv1zBYbxYJ5zzz1V ENCSR000EGR https://www.encodeproject.org/experiments/ENCSR000EGR transcription factor NFYA-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF818QIJ https://www.encodeproject.org/files/ENCFF818QIJ/@@download/ENCFF818QIJ.bam ENCFF485LHB https://www.encodeproject.org/files/ENCFF485LHB/@@download/ENCFF485LHB.bam 20.6 M 0 13.0 M 0.632 SE 34 27 27 0.0 M 9.0 M 7.1 M 0.343 0.79 0.79 4.96 105 1.43 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/490eb879-8904-4fc6-a179-6610da40355c/@@download/cross_correlation_plot/ENCFF000YUV-ENCFF000YUU_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATR "ENCFF000YUV,ENCFF000YUU" Illumina Genome Analyzer 2017-07-11T21:26:34.963283+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5XXXXj03691X1jJ2b5gyg11 ENCSR000EGR https://www.encodeproject.org/experiments/ENCSR000EGR transcription factor NFYA-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF363BPK https://www.encodeproject.org/files/ENCFF363BPK/@@download/ENCFF363BPK.bam ENCFF332TEB https://www.encodeproject.org/files/ENCFF332TEB/@@download/ENCFF332TEB.bam 17.5 M 0 8.3 M 0.476 SE 34 27 27 0.0 M 4.6 M 3.8 M 0.219 0.84 0.84 6.08 90 1.32 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/9373ea2b-2ff3-4c88-86eb-5feb43e01ae8/@@download/cross_correlation_plot/ENCFF000YVR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALC ENCFF000YVR Illumina Genome Analyzer 2017-07-11T21:16:34.387162+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5XXXbj0369K8BqF2fFFg18F ENCSR000EGQ https://www.encodeproject.org/experiments/ENCSR000EGQ transcription factor NFYB-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF817VBY https://www.encodeproject.org/files/ENCFF817VBY/@@download/ENCFF817VBY.bam ENCFF838ILZ https://www.encodeproject.org/files/ENCFF838ILZ/@@download/ENCFF838ILZ.bam 19.1 M 0 8.3 M 0.436 SE 34 27 27 0.0 M 4.3 M 3.6 M 0.186 0.83 0.85 6.79 150 3.37 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a226edf-d1f6-46c7-9da8-a0f6ddb0da84/@@download/cross_correlation_plot/ENCFF000YVV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAA ENCFF000YVV Illumina Genome Analyzer 2017-07-20T18:25:10.310363+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5jKJKj0369036YB6Qz0gJ43 ENCSR000EGQ https://www.encodeproject.org/experiments/ENCSR000EGQ transcription factor NFYB-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF267XWV https://www.encodeproject.org/files/ENCFF267XWV/@@download/ENCFF267XWV.bam ENCFF068JXL https://www.encodeproject.org/files/ENCFF068JXL/@@download/ENCFF068JXL.bam 15.3 M 0 9.4 M 0.617 SE 34 27 27 0.0 M 6.3 M 3.6 M 0.235 0.57 0.67 3.56 115 5.86 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bdadb4d-439b-4db1-9fad-164300c0e028/@@download/cross_correlation_plot/ENCFF000YVB-ENCFF000YVA_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALA "ENCFF000YVB,ENCFF000YVA" Illumina Genome Analyzer 2017-07-20T18:23:52.943254+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5jKJX0036971XFvJ466ZKGj ENCSR331BDJ https://www.encodeproject.org/experiments/ENCSR331BDJ RNA binding protein NKRF-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF887MQT https://www.encodeproject.org/files/ENCFF887MQT/@@download/ENCFF887MQT.bam ENCFF311QZG https://www.encodeproject.org/files/ENCFF311QZG/@@download/ENCFF311QZG.bam 52.5 M 0 50.3 M 0.958 PE 100 100 native 21.9 M 0.0 M 21.3 M 0.811 0.97 0.97 35.09 195 1.08 3.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/48c6c6c0-ad51-4d77-93c4-30359f8cab9a/@@download/cross_correlation_plot/ENCFF735DMNENCFF708VCO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB437YKX michael-snyder:L-2037 "ENCFF708VCO,ENCFF735DMN" HiSeq 2000 2016-10-09T17:37:49.927708+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5p980jv1YvGVzF100Zf5P ENCSR331BDJ https://www.encodeproject.org/experiments/ENCSR331BDJ RNA binding protein NKRF-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF543IWP https://www.encodeproject.org/files/ENCFF543IWP/@@download/ENCFF543IWP.bam ENCFF425ZWU https://www.encodeproject.org/files/ENCFF425ZWU/@@download/ENCFF425ZWU.bam 72.4 M 0 69.5 M 0.960 PE 100 100 native 30.4 M 0.0 M 29.2 M 0.807 0.96 0.96 25.72 215 1.10 2.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ebfc58a-e4f0-4b3b-972c-62c966611e1c/@@download/cross_correlation_plot/ENCFF599KBSENCFF259JYL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB457YMV michael-snyder:L-2038 "ENCFF259JYL,ENCFF599KBS" HiSeq 2000 2016-10-09T17:41:45.106269+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5pFQ0jv1QkfFX8V1vJb93 ENCSR886RYH https://www.encodeproject.org/experiments/ENCSR886RYH "RNA binding protein,transcription factor" NONO-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF008CUX https://www.encodeproject.org/files/ENCFF008CUX/@@download/ENCFF008CUX.bam ENCFF085YFB https://www.encodeproject.org/files/ENCFF085YFB/@@download/ENCFF085YFB.bam 73.4 M 0 63.4 M 0.865 PE 100 100 native 28.3 M 0.0 M 16.5 M 0.449 0.58 0.59 2.42 180 1.18 4.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/52b63a26-43b6-4df5-ba28-a17577bf71b5/@@download/cross_correlation_plot/ENCFF902KOTENCFF499MPN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB394RCX michael-snyder:L-3131 "ENCFF499MPN,ENCFF902KOT" HiSeq 4000 2017-01-28T04:51:11.552029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kF5803690Y3fv13Vv49f6 ENCSR886RYH https://www.encodeproject.org/experiments/ENCSR886RYH "RNA binding protein,transcription factor" NONO-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF549MBS https://www.encodeproject.org/files/ENCFF549MBS/@@download/ENCFF549MBS.bam ENCFF334YKJ https://www.encodeproject.org/files/ENCFF334YKJ/@@download/ENCFF334YKJ.bam 65.5 M 0 51.2 M 0.781 PE 100 100 native 22.8 M 0.0 M 14.2 M 0.435 0.63 0.63 2.72 170 1.21 2.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe32b511-5d2c-415a-9ed7-f7e6ac739b6e/@@download/cross_correlation_plot/ENCFF100NWHENCFF594FPL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB972NRV michael-snyder:L-3132 "ENCFF100NWH,ENCFF594FPL" HiSeq 4000 2017-01-28T04:50:07.416067+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kGjQ0369FyB7213b81k3p ENCSR842CJQ https://www.encodeproject.org/experiments/ENCSR842CJQ transcription factor NR0B1-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR742IDN https://www.encodeproject.org/experiments/ENCSR742IDN transcription factor NR2C1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF149WGG https://www.encodeproject.org/files/ENCFF149WGG/@@download/ENCFF149WGG.bam ENCFF029WOR https://www.encodeproject.org/files/ENCFF029WOR/@@download/ENCFF029WOR.bam 57.1 M 0 52.1 M 0.913 PE 100 100 native 22.6 M 0.0 M 20.8 M 0.729 0.92 0.92 12.27 220 1.37 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a47bb62-6829-45e7-b41f-430276040f81/@@download/cross_correlation_plot/ENCFF025RHUENCFF562VET.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB463BWS michael-snyder:L-2039 "ENCFF025RHU,ENCFF562VET" HiSeq 4000 2016-09-16T03:16:33.490244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz0Yj0369BvpJbQkBjPZY6 ENCSR742IDN https://www.encodeproject.org/experiments/ENCSR742IDN transcription factor NR2C1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF315DCZ https://www.encodeproject.org/files/ENCFF315DCZ/@@download/ENCFF315DCZ.bam ENCFF161YUM https://www.encodeproject.org/files/ENCFF161YUM/@@download/ENCFF161YUM.bam 108.2 M 0 99.4 M 0.918 PE 100 100 native 43.2 M 0.0 M 37.4 M 0.692 0.87 0.87 7.31 215 1.34 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7b4a2dc-aeeb-4cca-8c6f-7100b844fcde/@@download/cross_correlation_plot/ENCFF146EKIENCFF102DIC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB408KAB michael-snyder:L-2040 "ENCFF102DIC,ENCFF146EKI" HiSeq 4000 2016-09-16T03:19:32.787609+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz0fj0369BvpJbQkBjPZZ7 ENCSR970NKQ https://www.encodeproject.org/experiments/ENCSR970NKQ transcription factor NR2F1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF284XYU https://www.encodeproject.org/files/ENCFF284XYU/@@download/ENCFF284XYU.bam ENCFF565IHI https://www.encodeproject.org/files/ENCFF565IHI/@@download/ENCFF565IHI.bam 50.1 M 0 48.9 M 0.976 PE 100 100 native 21.8 M 0.0 M 17.4 M 0.693 0.80 0.79 4.66 230 1.32 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/40ac69c7-7baa-408d-afdb-1e48087e7831/@@download/cross_correlation_plot/ENCFF394OKZENCFF579DKO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB390CHI michael-snyder:L-297 "ENCFF394OKZ,ENCFF579DKO" HiSeq 2000 2016-10-09T17:06:32.588555+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41kQ0jv1zBYbxYJ5zzz6Z ENCSR970NKQ https://www.encodeproject.org/experiments/ENCSR970NKQ transcription factor NR2F1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF550IUC https://www.encodeproject.org/files/ENCFF550IUC/@@download/ENCFF550IUC.bam ENCFF010LCS https://www.encodeproject.org/files/ENCFF010LCS/@@download/ENCFF010LCS.bam 50.8 M 0 49.2 M 0.967 PE 100 100 native 21.9 M 0.0 M 18.2 M 0.716 0.83 0.83 5.65 215 1.45 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/28639181-c64a-4412-98e8-1b791fc98be9/@@download/cross_correlation_plot/ENCFF691DSFENCFF810SJL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB278RSF michael-snyder:L-298 "ENCFF810SJL,ENCFF691DSF" HiSeq 2000 2016-10-09T17:04:14.809336+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41q00jv1zBYbxYJ5zzz6v ENCSR000EHH https://www.encodeproject.org/experiments/ENCSR000EHH transcription factor NRF1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF084WSP https://www.encodeproject.org/files/ENCFF084WSP/@@download/ENCFF084WSP.bam ENCFF733NCK https://www.encodeproject.org/files/ENCFF733NCK/@@download/ENCFF733NCK.bam 27.5 M 0 21.8 M 0.793 SE 36 36 native 0.0 M 16.0 M 14.4 M 0.523 0.90 0.90 9.87 105 1.12 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/d230ae01-485d-4694-b7dc-6e1e9ebe38ee/@@download/cross_correlation_plot/ENCFF000YWC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUV ENCFF000YWC Illumina Genome Analyzer 2016-12-10T17:50:34.199164+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162BJ0036993F1b953B4P9f ENCSR494TDU https://www.encodeproject.org/experiments/ENCSR494TDU transcription factor NRF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF337GMY https://www.encodeproject.org/files/ENCFF337GMY/@@download/ENCFF337GMY.bam ENCFF626MZK https://www.encodeproject.org/files/ENCFF626MZK/@@download/ENCFF626MZK.bam 67.7 M 0 65.9 M 0.973 PE 100 100 native 29.9 M 0.0 M 25.0 M 0.739 0.84 0.84 6.09 290 5.97 2.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/53421ced-c70b-4cbf-9a85-7aeac9225b86/@@download/cross_correlation_plot/ENCFF002DPBENCFF002DUE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB047HZO michael-snyder:712_A_TruSeq_CGATGT "ENCFF002DUE,ENCFF002DPB" HiSeq 2000 2016-10-09T17:12:49.849475+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3byQ0jv1QxJBfj5Zb2pB6 ENCSR494TDU https://www.encodeproject.org/experiments/ENCSR494TDU transcription factor NRF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF821HMU https://www.encodeproject.org/files/ENCFF821HMU/@@download/ENCFF821HMU.bam ENCFF763PNZ https://www.encodeproject.org/files/ENCFF763PNZ/@@download/ENCFF763PNZ.bam 72.0 M 0 71.0 M 0.987 PE 100 100 native 32.1 M 0.0 M 29.3 M 0.815 0.92 0.92 11.85 290 2.81 2.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/4eaec2d6-2229-47cf-87eb-82add981f733/@@download/cross_correlation_plot/ENCFF002EGBENCFF002DPD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB116QWY michael-snyder:712_B_TruSeq_CGATGT "ENCFF002EGB,ENCFF002DPD" HiSeq 2000 2016-10-09T17:14:14.358162+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3f080jv1QxJBfj5Zb2pBK ENCSR998AJK https://www.encodeproject.org/experiments/ENCSR998AJK transcription factor NRF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF564CXM https://www.encodeproject.org/files/ENCFF564CXM/@@download/ENCFF564CXM.bam ENCFF933GGT https://www.encodeproject.org/files/ENCFF933GGT/@@download/ENCFF933GGT.bam 67.5 M 0 65.9 M 0.976 PE 100 100 native 29.9 M 0.0 M 27.5 M 0.815 0.92 0.92 13.88 290 6.19 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6669f52-4b86-4086-9932-7b119ceb4542/@@download/cross_correlation_plot/ENCFF002DPAENCFF002EFX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB029MXN michael-snyder:712_A_TruSeq_ATCACG "ENCFF002EFX,ENCFF002DPA" HiSeq 2000 2016-11-08T23:47:54.269786+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JbzGj0369448Z3JGpJkbPF ENCSR998AJK https://www.encodeproject.org/experiments/ENCSR998AJK transcription factor NRF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF722LJA https://www.encodeproject.org/files/ENCFF722LJA/@@download/ENCFF722LJA.bam ENCFF675LCH https://www.encodeproject.org/files/ENCFF675LCH/@@download/ENCFF675LCH.bam 72.3 M 0 71.4 M 0.986 PE 100 100 native 32.3 M 0.0 M 28.6 M 0.791 0.89 0.89 8.90 305 3.87 2.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d5e9f29-3896-4e7d-8192-5488c25a5207/@@download/cross_correlation_plot/ENCFF002EFZENCFF002DPF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB717XNT michael-snyder:712_B_TruSeq_ATCACG "ENCFF002EFZ,ENCFF002DPF" HiSeq 2000 2016-11-08T23:51:15.624332+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JbzQ803691FyPPP8p3JX0B ENCSR924GXX https://www.encodeproject.org/experiments/ENCSR924GXX transcription factor PHB2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF229VMU https://www.encodeproject.org/files/ENCFF229VMU/@@download/ENCFF229VMU.bam ENCFF828ZBV https://www.encodeproject.org/files/ENCFF828ZBV/@@download/ENCFF828ZBV.bam 64.6 M 0 60.3 M 0.934 PE 100 100 native 26.0 M 0.0 M 24.4 M 0.756 0.94 0.94 15.83 205 1.07 3.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/05811db4-23da-4613-882c-aa7acdc577a2/@@download/cross_correlation_plot/ENCFF499ADGENCFF005PFF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB218JFX michael-snyder:L-2033 "ENCFF005PFF,ENCFF499ADG" HiSeq 2000 2016-09-07T16:36:51.689762+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz7bjY00369K8fzV21yYP22Z ENCSR924GXX https://www.encodeproject.org/experiments/ENCSR924GXX transcription factor PHB2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF802CIM https://www.encodeproject.org/files/ENCFF802CIM/@@download/ENCFF802CIM.bam ENCFF383RGH https://www.encodeproject.org/files/ENCFF383RGH/@@download/ENCFF383RGH.bam 54.5 M 0 46.2 M 0.848 PE 100 100 native 20.0 M 0.0 M 18.9 M 0.692 0.95 0.95 18.20 210 1.10 3.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/6932cc48-321e-4063-b610-b6584ae90a3f/@@download/cross_correlation_plot/ENCFF672NIZENCFF513NXC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB733EMZ michael-snyder:L-2034 "ENCFF513NXC,ENCFF672NIZ" HiSeq 2000 2016-09-07T16:35:53.078505+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz7bjg80369BfbpV39ypQbp9 ENCSR115SMW https://www.encodeproject.org/experiments/ENCSR115SMW transcription factor PKNOX1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF636IGK https://www.encodeproject.org/files/ENCFF636IGK/@@download/ENCFF636IGK.bam ENCFF672RSD https://www.encodeproject.org/files/ENCFF672RSD/@@download/ENCFF672RSD.bam 72.8 M 0 71.5 M 0.983 PE 100 100 native 31.7 M 0.0 M 29.0 M 0.797 0.91 0.91 11.61 205 1.88 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/20722e04-1769-46d6-8c61-1a1bbcdc4b95/@@download/cross_correlation_plot/ENCFF755HHMENCFF292YNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB968GQF michael-snyder:L-290 "ENCFF755HHM,ENCFF292YNE" HiSeq 2000 2016-10-09T17:07:04.738734+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6J780jv1f6Kg8jbGjKZP3 ENCSR115SMW https://www.encodeproject.org/experiments/ENCSR115SMW transcription factor PKNOX1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF494OJC https://www.encodeproject.org/files/ENCFF494OJC/@@download/ENCFF494OJC.bam ENCFF653BMD https://www.encodeproject.org/files/ENCFF653BMD/@@download/ENCFF653BMD.bam 65.4 M 0 64.3 M 0.984 PE 100 100 native 28.7 M 0.0 M 26.6 M 0.812 0.93 0.93 13.96 225 2.27 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c8a4e20-d652-40e4-8eb7-67f9d2d3762c/@@download/cross_correlation_plot/ENCFF921VOKENCFF871SUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB342XMG michael-snyder:L-294 "ENCFF871SUI,ENCFF921VOK" HiSeq 2000 2016-10-09T17:06:08.929191+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6J9Q0jv1x3KYJK9kQ04jj ENCSR000EHL https://www.encodeproject.org/experiments/ENCSR000EHL transcription factor POLR2A-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF658FLY https://www.encodeproject.org/files/ENCFF658FLY/@@download/ENCFF658FLY.bam ENCFF333ESU https://www.encodeproject.org/files/ENCFF333ESU/@@download/ENCFF333ESU.bam 17.8 M 0 11.5 M 0.649 SE 28 28 28 0.0 M 7.4 M 7.2 M 0.403 0.96 0.96 27.72 165 1.13 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4dc7116-7bac-430a-97d7-7b41bc6a83b5/@@download/cross_correlation_plot/ENCFF000YXO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AME ENCFF000YXO Illumina Genome Analyzer 2017-01-05T21:22:24.919178+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7qQQ0369PjBfKG4QzQx2X ENCSR000EHL https://www.encodeproject.org/experiments/ENCSR000EHL transcription factor POLR2A-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF185VII https://www.encodeproject.org/files/ENCFF185VII/@@download/ENCFF185VII.bam ENCFF496HBX https://www.encodeproject.org/files/ENCFF496HBX/@@download/ENCFF496HBX.bam 19.3 M 0 12.4 M 0.640 SE 28 28 28 0.0 M 7.8 M 7.6 M 0.392 0.96 0.97 29.49 155 1.13 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/21e47c20-ad14-4836-a628-5084808e61e4/@@download/cross_correlation_plot/ENCFF000YXN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AMD ENCFF000YXN Illumina Genome Analyzer 2017-01-05T21:21:16.569281+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7qf00369Kbx0VG4x7402x ENCSR000EHP https://www.encodeproject.org/experiments/ENCSR000EHP transcription factor POLR2A-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF914ABF https://www.encodeproject.org/files/ENCFF914ABF/@@download/ENCFF914ABF.bam ENCFF130MGZ https://www.encodeproject.org/files/ENCFF130MGZ/@@download/ENCFF130MGZ.bam 14.7 M 0 10.6 M 0.720 SE 27 27 27 0.0 M 6.6 M 6.5 M 0.441 0.97 0.98 49.51 85 1.76 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/f47df257-67c3-49ac-8b14-54cc30040964/@@download/cross_correlation_plot/ENCFF000YPQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADL ENCFF000YPQ Illumina Genome Analyzer 2017-02-24T16:17:41.501310+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbJB003691jF9jFjv0J0zk ENCSR000EHP https://www.encodeproject.org/experiments/ENCSR000EHP transcription factor POLR2A-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF548NQU https://www.encodeproject.org/files/ENCFF548NQU/@@download/ENCFF548NQU.bam ENCFF123QRZ https://www.encodeproject.org/files/ENCFF123QRZ/@@download/ENCFF123QRZ.bam 22.6 M 0 18.8 M 0.834 SE 34 27 27 0.0 M 13.1 M 12.2 M 0.539 0.93 0.95 22.15 75 1.99 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/a358981b-8ee2-4db2-86e3-680014716442/@@download/cross_correlation_plot/ENCFF000YPO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAQ ENCFF000YPO Illumina Genome Analyzer 2017-02-24T16:18:04.149335+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbJQQ03691y2Qy17bKj5G8 ENCSR031TFS https://www.encodeproject.org/experiments/ENCSR031TFS transcription factor POLR2A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF725WJS https://www.encodeproject.org/files/ENCFF725WJS/@@download/ENCFF725WJS.bam ENCFF331RLM https://www.encodeproject.org/files/ENCFF331RLM/@@download/ENCFF331RLM.bam 53.4 M 0 52.6 M 0.984 PE 100 100 native 23.3 M 0.0 M 20.5 M 0.766 0.88 0.88 7.96 225 1.19 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6607ab6-4e68-411c-9204-4460b87c7952/@@download/cross_correlation_plot/ENCFF272EEGENCFF531FHF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB623DFV michael-snyder:L-2063 "ENCFF272EEG,ENCFF531FHF" HiSeq 2000 2016-10-09T17:05:47.357484+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4KXQ0jv1XYYX2Fxk3f5Kx ENCSR031TFS https://www.encodeproject.org/experiments/ENCSR031TFS transcription factor POLR2A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF559BJS https://www.encodeproject.org/files/ENCFF559BJS/@@download/ENCFF559BJS.bam ENCFF806AHN https://www.encodeproject.org/files/ENCFF806AHN/@@download/ENCFF806AHN.bam 51.6 M 0 50.4 M 0.975 PE 100 100 native 22.4 M 0.0 M 18.8 M 0.729 0.84 0.84 6.03 230 1.30 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ed2d00e-2a8a-43c5-bf8e-8085f40162a5/@@download/cross_correlation_plot/ENCFF959SCNENCFF545PSD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB610CGS michael-snyder:L-2064 "ENCFF959SCN,ENCFF545PSD" HiSeq 2000 2016-10-09T17:05:26.931974+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4KZ00jv1QxJBfj5Zb2q1J ENCSR388QZF https://www.encodeproject.org/experiments/ENCSR388QZF transcription factor POLR2A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF438GBD https://www.encodeproject.org/files/ENCFF438GBD/@@download/ENCFF438GBD.bam ENCFF536MUP https://www.encodeproject.org/files/ENCFF536MUP/@@download/ENCFF536MUP.bam 46.7 M 0 46.1 M 0.988 PE 100 100 native 20.4 M 0.0 M 19.8 M 0.846 0.97 0.97 32.74 225 1.44 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/0cbf0127-b4d5-4e7c-a134-cf9ce821c42f/@@download/cross_correlation_plot/ENCFF920SBMENCFF400NVU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB040QQO michael-snyder:L-2125 "ENCFF400NVU,ENCFF920SBM" HiSeq 2000 2016-10-09T17:35:17.599138+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv60p80jv1XvFGkBjjfjQzp ENCSR388QZF https://www.encodeproject.org/experiments/ENCSR388QZF transcription factor POLR2A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF601CVJ https://www.encodeproject.org/files/ENCFF601CVJ/@@download/ENCFF601CVJ.bam ENCFF334RNJ https://www.encodeproject.org/files/ENCFF334RNJ/@@download/ENCFF334RNJ.bam 61.1 M 0 60.2 M 0.986 PE 100 100 native 26.6 M 0.0 M 25.4 M 0.831 0.95 0.95 21.75 220 1.60 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5b64d32-12fd-4c5f-b00b-0e99ccd22ea7/@@download/cross_correlation_plot/ENCFF839LPLENCFF698ICA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB464RQG michael-snyder:L-2126 "ENCFF839LPL,ENCFF698ICA" HiSeq 2000 2016-10-09T17:36:53.935832+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv60v80jv1vY92b0GYjVGG4 ENCSR000EGF https://www.encodeproject.org/experiments/ENCSR000EGF "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF630JRN https://www.encodeproject.org/files/ENCFF630JRN/@@download/ENCFF630JRN.bam ENCFF495NNH https://www.encodeproject.org/files/ENCFF495NNH/@@download/ENCFF495NNH.bam 29.3 M 0 29.1 M 0.993 SE 36 36 native 0.0 M 22.7 M 21.9 M 0.746 0.96 0.97 31.21 60 1.13 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/01b3ce72-cd59-4dad-bc5b-7737c1f0e3e8/@@download/cross_correlation_plot/ENCFF000YXC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQN ENCFF000YXC Illumina Genome Analyzer 2016-12-12T17:21:32.724337+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1620G80369Bxb30J6x5bYqx ENCSR000EGF https://www.encodeproject.org/experiments/ENCSR000EGF "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF594OID https://www.encodeproject.org/files/ENCFF594OID/@@download/ENCFF594OID.bam ENCFF811ZTI https://www.encodeproject.org/files/ENCFF811ZTI/@@download/ENCFF811ZTI.bam 26.1 M 0 26.0 M 0.993 SE 36 36 native 0.0 M 20.4 M 19.7 M 0.753 0.97 0.97 31.71 80 1.10 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f2948a1-0281-4d77-b0f5-afec007d6783/@@download/cross_correlation_plot/ENCFF000YXE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADS ENCFF000YXE Illumina Genome Analyzer 2016-12-12T17:21:34.814018+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1620Q80369B6ZyvJ8yKQX7B ENCSR000EHF https://www.encodeproject.org/experiments/ENCSR000EHF "other context,other post-translational modification,transcription factor" POLR2AphosphoS2-human K562 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EHQ https://www.encodeproject.org/experiments/ENCSR000EHQ transcription factor POLR3G-human K562 immortalized cell line michael-snyder ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EHI https://www.encodeproject.org/experiments/ENCSR000EHI control rabbit-IgG-control-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF023NGN https://www.encodeproject.org/files/ENCFF023NGN/@@download/ENCFF023NGN.bam ENCFF995QWY https://www.encodeproject.org/files/ENCFF995QWY/@@download/ENCFF995QWY.bam 48.6 M 0 33.5 M 0.691 SE 36 36 None 0.0 M 24.0 M 23.5 M 0.484 0.98 0.98 54.07 115 1.02 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/35476b8f-ba26-45c7-a557-89bbbc29dda0/@@download/cross_correlation_plot/ENCFF000YRB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB603BJA ENCFF000YRB Illumina Genome Analyzer 2016-07-28T00:32:44.987007+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGY4fQ0369Gfk3ZV012F4F8 ENCSR554FDZ https://www.encodeproject.org/experiments/ENCSR554FDZ control rabbit-IgG-control-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF937WDE https://www.encodeproject.org/files/ENCFF937WDE/@@download/ENCFF937WDE.bam ENCFF886HHO https://www.encodeproject.org/files/ENCFF886HHO/@@download/ENCFF886HHO.bam 46.1 M 0 40.1 M 0.869 PE 100 None 18.0 M 0.0 M 15.7 M 0.679 0.88 0.88 8.15 230 1.11 5.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/cee8ed90-385f-4daf-9ba2-d357575679fc/@@download/cross_correlation_plot/ENCFF002EFYENCFF002DUC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB080FTU michael-snyder:611_B_Tru-seq_CGATGT "ENCFF002EFY,ENCFF002DUC" HiSeq 2000 2016-05-06T18:12:55.580355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqP9j03691Q4QQpZ2q8BZg ENCSR554FDZ https://www.encodeproject.org/experiments/ENCSR554FDZ control rabbit-IgG-control-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF895QZG https://www.encodeproject.org/files/ENCFF895QZG/@@download/ENCFF895QZG.bam ENCFF527IMT https://www.encodeproject.org/files/ENCFF527IMT/@@download/ENCFF527IMT.bam 68.7 M 0 66.7 M 0.972 PE 100 None 30.0 M 0.0 M 28.0 M 0.815 0.93 0.93 14.86 160 1.09 6.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/62bb1cd4-87fd-498c-aab1-524c80909029/@@download/cross_correlation_plot/ENCFF002EGIENCFF002EGA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB960ZOZ michael-snyder:672_B_TruSeq_TGACCA "ENCFF002EGI,ENCFF002EGA" HiSeq 2000 2016-05-06T18:15:45.189429+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqPFj036929FJGg42Xq207 ENCSR524BUE https://www.encodeproject.org/experiments/ENCSR524BUE transcription factor RAD51-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF168TBA https://www.encodeproject.org/files/ENCFF168TBA/@@download/ENCFF168TBA.bam ENCFF932WIS https://www.encodeproject.org/files/ENCFF932WIS/@@download/ENCFF932WIS.bam 52.2 M 0 51.0 M 0.978 PE 100 100 native 22.7 M 0.0 M 18.4 M 0.706 0.81 0.81 4.98 215 1.22 2.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2cfadc0-a764-4a67-b792-8dae27ec98aa/@@download/cross_correlation_plot/ENCFF273REOENCFF809ISJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB774HOZ michael-snyder:L-299 "ENCFF809ISJ,ENCFF273REO" HiSeq 2000 2016-10-09T17:03:57.303212+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42900jv1QxJBfj5Zb2pYy ENCSR524BUE https://www.encodeproject.org/experiments/ENCSR524BUE transcription factor RAD51-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF024NZQ https://www.encodeproject.org/files/ENCFF024NZQ/@@download/ENCFF024NZQ.bam ENCFF132PRX https://www.encodeproject.org/files/ENCFF132PRX/@@download/ENCFF132PRX.bam 56.5 M 0 55.2 M 0.977 PE 100 100 native 24.6 M 0.0 M 21.0 M 0.743 0.85 0.85 6.44 220 1.39 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e9863d7-68c3-4e6a-a202-cba71b66bc41/@@download/cross_correlation_plot/ENCFF354UBVENCFF600KXI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB961RCO michael-snyder:L-300 "ENCFF354UBV,ENCFF600KXI" HiSeq 2000 2016-10-09T17:05:40.260936+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42Bj0jv1XvFGkBjjfjQ8B ENCSR670JDQ https://www.encodeproject.org/experiments/ENCSR670JDQ transcription factor RB1-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF706XFF https://www.encodeproject.org/files/ENCFF706XFF/@@download/ENCFF706XFF.bam ENCFF621VLS https://www.encodeproject.org/files/ENCFF621VLS/@@download/ENCFF621VLS.bam 76.7 M 0 51.0 M 0.666 PE 100 100 native 22.5 M 0.0 M 19.5 M 0.508 0.87 0.87 7.36 150 1.13 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a38f588-1f0d-4b1b-b8c1-9c04bf88645b/@@download/cross_correlation_plot/ENCFF615SOFENCFF656UEH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB457CJU michael-snyder:L-3129 "ENCFF615SOF,ENCFF656UEH" HiSeq 2000 2017-03-04T18:11:49.940032+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv2b00369Jvq8g82Pv828Y ENCSR670JDQ https://www.encodeproject.org/experiments/ENCSR670JDQ transcription factor RB1-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF459MNI https://www.encodeproject.org/files/ENCFF459MNI/@@download/ENCFF459MNI.bam ENCFF023AOR https://www.encodeproject.org/files/ENCFF023AOR/@@download/ENCFF023AOR.bam 64.0 M 0 49.0 M 0.766 PE 100 100 native 21.8 M 0.0 M 20.7 M 0.648 0.95 0.95 19.81 155 1.17 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e587359-260c-4a71-8772-5f37de4d1d4e/@@download/cross_correlation_plot/ENCFF935GDUENCFF268JOY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB661JJB michael-snyder:L-3130 "ENCFF935GDU,ENCFF268JOY" HiSeq 2000 2017-03-04T18:11:03.911304+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv2qQ0369PGfpQ3jZKZG47 ENCSR000EGC https://www.encodeproject.org/experiments/ENCSR000EGC transcription factor RCOR1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF623TAD https://www.encodeproject.org/files/ENCFF623TAD/@@download/ENCFF623TAD.bam ENCFF796EJK https://www.encodeproject.org/files/ENCFF796EJK/@@download/ENCFF796EJK.bam 24.9 M 0 23.3 M 0.933 SE 36 36 native 0.0 M 17.2 M 16.7 M 0.671 0.98 0.98 42.51 95 1.08 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/88178e9d-ed05-40bf-b9b1-c0b0a75d6857/@@download/cross_correlation_plot/ENCFF000YLF-ENCFF000YLC_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALM "ENCFF000YLF,ENCFF000YLC" Illumina Genome Analyzer 2016-12-11T05:03:51.297213+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164qy00369PJ8BP63qf1Fgq ENCSR000EGC https://www.encodeproject.org/experiments/ENCSR000EGC transcription factor RCOR1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF112DFJ https://www.encodeproject.org/files/ENCFF112DFJ/@@download/ENCFF112DFJ.bam ENCFF694BOP https://www.encodeproject.org/files/ENCFF694BOP/@@download/ENCFF694BOP.bam 31.7 M 0 31.3 M 0.989 SE 36 36 native 0.0 M 23.9 M 23.1 M 0.729 0.97 0.97 30.94 110 1.03 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/bebec6c7-f68c-45d9-98c5-9ee62a557cea/@@download/cross_correlation_plot/ENCFF000YLH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGF ENCFF000YLH Illumina Genome Analyzer 2016-12-11T04:01:08.274368+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164v300369KQ3Yk1yz1kgYQ ENCSR000EGG https://www.encodeproject.org/experiments/ENCSR000EGG transcription factor RCOR1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF444OMB https://www.encodeproject.org/files/ENCFF444OMB/@@download/ENCFF444OMB.bam ENCFF167HUG https://www.encodeproject.org/files/ENCFF167HUG/@@download/ENCFF167HUG.bam 25.1 M 0 24.3 M 0.968 SE 36 36 native 0.0 M 18.7 M 18.1 M 0.720 0.97 0.97 37.52 105 1.38 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/674e38a2-7f2e-437f-a1b2-1529a96f7cf0/@@download/cross_correlation_plot/ENCFF000YLO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKJ ENCFF000YLO Illumina Genome Analyzer 2016-12-11T05:00:21.404125+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166J6Q0369BgG8x1ygv1Xj2 ENCSR000EGG https://www.encodeproject.org/experiments/ENCSR000EGG transcription factor RCOR1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF523QGZ https://www.encodeproject.org/files/ENCFF523QGZ/@@download/ENCFF523QGZ.bam ENCFF755IVD https://www.encodeproject.org/files/ENCFF755IVD/@@download/ENCFF755IVD.bam 21.9 M 0 20.7 M 0.948 SE 36 36 native 0.0 M 15.7 M 15.2 M 0.696 0.97 0.97 38.53 100 1.28 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/b318ea0a-d069-452d-b682-f41978a7600d/@@download/cross_correlation_plot/ENCFF000YLQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKL ENCFF000YLQ Illumina Genome Analyzer 2016-12-11T05:00:51.988544+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166JG803695Kj1j8qPQgkk9 ENCSR137ZMQ https://www.encodeproject.org/experiments/ENCSR137ZMQ "transcription factor,chromatin remodeller" REST-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF253JTJ https://www.encodeproject.org/files/ENCFF253JTJ/@@download/ENCFF253JTJ.bam ENCFF481VHS https://www.encodeproject.org/files/ENCFF481VHS/@@download/ENCFF481VHS.bam 95.3 M 0 94.1 M 0.988 PE 100 100 native 42.7 M 0.0 M 34.2 M 0.717 0.80 0.80 4.79 205 1.66 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/d751fd11-dbe7-4131-be60-1a7fad13dcbe/@@download/cross_correlation_plot/ENCFF002EJCENCFF002EIZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB693QTZ michael-snyder:818_B_truseq_ATCACG "ENCFF002EJC,ENCFF002EIZ" HiSeq 2000 2016-10-29T18:09:18.561729+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B298Q0jv1xYX7855VG0JBb ENCSR137ZMQ https://www.encodeproject.org/experiments/ENCSR137ZMQ "transcription factor,chromatin remodeller" REST-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF268CBK https://www.encodeproject.org/files/ENCFF268CBK/@@download/ENCFF268CBK.bam ENCFF369DNX https://www.encodeproject.org/files/ENCFF369DNX/@@download/ENCFF369DNX.bam 100.7 M 0 99.3 M 0.987 PE 100 100 native 44.7 M 0.0 M 41.8 M 0.830 0.93 0.94 15.53 195 1.30 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/530f33a2-acd1-4ae6-ba4d-29a2a6a96e36/@@download/cross_correlation_plot/ENCFF002EJEENCFF002EJH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB077NGB michael-snyder:818_B_truseq_CGATGT "ENCFF002EJH,ENCFF002EJE" HiSeq 2000 2016-10-29T18:09:46.076272+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29G00jv1X3z1QYVBPppZ4 ENCSR041AXL https://www.encodeproject.org/experiments/ENCSR041AXL transcription factor RFX1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF871KNP https://www.encodeproject.org/files/ENCFF871KNP/@@download/ENCFF871KNP.bam ENCFF340YYY https://www.encodeproject.org/files/ENCFF340YYY/@@download/ENCFF340YYY.bam 52.0 M 0 51.1 M 0.982 PE 100 100 native 22.3 M 0.0 M 19.8 M 0.763 0.89 0.89 8.95 215 1.63 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d42f380-05c7-4bb6-8c92-8ea102c5c827/@@download/cross_correlation_plot/ENCFF954WVJENCFF677RCM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB424ZPB michael-snyder:L-1716 "ENCFF677RCM,ENCFF954WVJ" HiSeq 2000 2016-10-09T17:03:40.207312+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6V3j0jv1f60PxyZ9JGPjQ ENCSR041AXL https://www.encodeproject.org/experiments/ENCSR041AXL transcription factor RFX1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF490ICL https://www.encodeproject.org/files/ENCFF490ICL/@@download/ENCFF490ICL.bam ENCFF836CNG https://www.encodeproject.org/files/ENCFF836CNG/@@download/ENCFF836CNG.bam 52.5 M 0 51.6 M 0.983 PE 100 100 native 22.7 M 0.0 M 19.9 M 0.758 0.88 0.88 8.23 235 1.89 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/765d3822-6955-487b-9019-f80ddb0cbd7d/@@download/cross_correlation_plot/ENCFF899IKWENCFF280GFD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB627UNC michael-snyder:L-1717 "ENCFF899IKW,ENCFF280GFD" HiSeq 2000 2016-10-09T17:04:27.787127+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6V5j0jv1XYYX2Fxk3f6G8 ENCSR968GIB https://www.encodeproject.org/experiments/ENCSR968GIB transcription factor RFX1-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF183MSQ https://www.encodeproject.org/files/ENCFF183MSQ/@@download/ENCFF183MSQ.bam ENCFF259IST https://www.encodeproject.org/files/ENCFF259IST/@@download/ENCFF259IST.bam 146.2 M 0 139.6 M 0.955 PE 100 100 native 61.1 M 0.0 M 37.2 M 0.509 0.61 0.61 2.54 240 1.60 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/36292755-caf2-4df3-aa77-a69baa0d5935/@@download/cross_correlation_plot/ENCFF493EZEENCFF207YQO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB412CSD michael-snyder:L-1810 "ENCFF207YQO,ENCFF493EZE" HiSeq 4000 2016-09-16T03:25:00.526338+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyQ1Q0369Fb155KvKP9184 ENCSR968GIB https://www.encodeproject.org/experiments/ENCSR968GIB transcription factor RFX1-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF837ZOY https://www.encodeproject.org/files/ENCFF837ZOY/@@download/ENCFF837ZOY.bam ENCFF626JTU https://www.encodeproject.org/files/ENCFF626JTU/@@download/ENCFF626JTU.bam 115.8 M 0 112.1 M 0.968 PE 100 100 native 49.5 M 0.0 M 35.0 M 0.604 0.71 0.70 3.34 235 2.27 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/3de0ad62-0f71-4f5f-87ac-88e515735915/@@download/cross_correlation_plot/ENCFF031QKWENCFF473RLY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB940HZD michael-snyder:L-1813 "ENCFF473RLY,ENCFF031QKW" HiSeq 4000 2016-09-16T03:22:35.355473+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyQ480369PzXj14kJK8Kx9 ENCSR000EGO https://www.encodeproject.org/experiments/ENCSR000EGO transcription factor RFX5-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF230AXK https://www.encodeproject.org/files/ENCFF230AXK/@@download/ENCFF230AXK.bam ENCFF050AHY https://www.encodeproject.org/files/ENCFF050AHY/@@download/ENCFF050AHY.bam 25.9 M 0 24.9 M 0.959 SE 36 36 native 0.0 M 19.1 M 15.5 M 0.599 0.82 0.82 5.36 115 1.08 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/97fb1c2c-e6fe-464d-9f76-34c46c51f8b7/@@download/cross_correlation_plot/ENCFF000YYD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACY ENCFF000YYD Illumina Genome Analyzer 2016-12-11T04:01:28.123184+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1650P003697yz601ypVJ3Vp ENCSR000EGO https://www.encodeproject.org/experiments/ENCSR000EGO transcription factor RFX5-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF524SJJ https://www.encodeproject.org/files/ENCFF524SJJ/@@download/ENCFF524SJJ.bam ENCFF841IIA https://www.encodeproject.org/files/ENCFF841IIA/@@download/ENCFF841IIA.bam 32.6 M 0 29.7 M 0.913 SE 36 36 native 0.0 M 22.9 M 20.4 M 0.627 0.89 0.90 10.14 110 1.06 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/da1ba9a1-cef9-4765-a566-f5a2ea2efe56/@@download/cross_correlation_plot/ENCFF000YYI-ENCFF000YYF_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKF "ENCFF000YYF,ENCFF000YYI" Illumina Genome Analyzer 2016-12-11T08:41:24.042033+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1650Yj03697yz601ypVJ3X4 ENCSR138FUZ https://www.encodeproject.org/experiments/ENCSR138FUZ "transcription factor,chromatin remodeller" RNF2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF726AYE https://www.encodeproject.org/files/ENCFF726AYE/@@download/ENCFF726AYE.bam ENCFF719EJR https://www.encodeproject.org/files/ENCFF719EJR/@@download/ENCFF719EJR.bam 27.8 M 0 27.4 M 0.987 SE 36 36 native 0.0 M 21.2 M 20.5 M 0.737 0.97 0.97 32.47 110 1.04 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/f71ab873-e395-4958-ab84-c3a0a2da2a29/@@download/cross_correlation_plot/ENCFF002EBI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB107GJJ michael-snyder:RING1B_5694_K562_Rep1 ENCFF002EBI Illumina Genome Analyzer IIx 2016-10-09T16:59:22.429219+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv467Q0jv1XYYX2Fxk3f54v ENCSR138FUZ https://www.encodeproject.org/experiments/ENCSR138FUZ "transcription factor,chromatin remodeller" RNF2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF880ODJ https://www.encodeproject.org/files/ENCFF880ODJ/@@download/ENCFF880ODJ.bam ENCFF302ALX https://www.encodeproject.org/files/ENCFF302ALX/@@download/ENCFF302ALX.bam 32.4 M 0 31.9 M 0.982 SE 36 36 native 0.0 M 24.3 M 20.8 M 0.641 0.86 0.86 6.85 125 1.04 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/418b1f19-a964-4e10-84af-cb7ea03f5099/@@download/cross_correlation_plot/ENCFF002EBK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB680YFS michael-snyder:RING1B_5694_K562_Rep2 ENCFF002EBK Illumina Genome Analyzer IIx 2016-10-09T16:59:09.150938+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46900jv1XvFGkBjjfjQGv ENCSR608XTF https://www.encodeproject.org/experiments/ENCSR608XTF "transcription factor,chromatin remodeller" RNF2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF779IQL https://www.encodeproject.org/files/ENCFF779IQL/@@download/ENCFF779IQL.bam ENCFF700UIV https://www.encodeproject.org/files/ENCFF700UIV/@@download/ENCFF700UIV.bam 130.8 M 0 124.8 M 0.955 PE 100 100 native 54.3 M 0.0 M 45.3 M 0.693 0.84 0.83 5.84 200 1.16 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/03292614-ae3d-4e17-b408-84ddc3136f13/@@download/cross_correlation_plot/ENCFF446JLZENCFF411FCT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB741MQA michael-snyder:L-1754 "ENCFF446JLZ,ENCFF411FCT" HiSeq 4000 2016-10-27T22:24:15.565313+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bpfj03694q32PPxBJ6b0k ENCSR608XTF https://www.encodeproject.org/experiments/ENCSR608XTF "transcription factor,chromatin remodeller" RNF2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF257OOQ https://www.encodeproject.org/files/ENCFF257OOQ/@@download/ENCFF257OOQ.bam ENCFF215XET https://www.encodeproject.org/files/ENCFF215XET/@@download/ENCFF215XET.bam 189.1 M 0 183.0 M 0.968 PE 100 100 native 79.0 M 0.0 M 65.7 M 0.695 0.83 0.83 5.80 210 1.08 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ca0af4e-36f5-4245-9899-a84e3a96782c/@@download/cross_correlation_plot/ENCFF470MPBENCFF742JMT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB401FBV michael-snyder:L-1755 "ENCFF742JMT,ENCFF470MPB" HiSeq 4000 2016-10-27T22:30:44.971659+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bpp003697KPkyX9BPQF4y ENCSR820GND https://www.encodeproject.org/experiments/ENCSR820GND "transcription factor,chromatin remodeller" RNF2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF587HZM https://www.encodeproject.org/files/ENCFF587HZM/@@download/ENCFF587HZM.bam ENCFF571LYC https://www.encodeproject.org/files/ENCFF571LYC/@@download/ENCFF571LYC.bam 50.1 M 0 49.2 M 0.982 PE 100 100 native 21.7 M 0.0 M 20.7 M 0.825 0.95 0.95 21.56 220 1.07 4.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d640f7c-28b0-499b-acf2-d56962e6e950/@@download/cross_correlation_plot/ENCFF829JEXENCFF044YZK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB065PPI michael-snyder:L-1845 "ENCFF044YZK,ENCFF829JEX" HiSeq 2000 2016-10-09T17:13:32.843714+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zVj0jv1zBYbxYJ5zzz35 ENCSR820GND https://www.encodeproject.org/experiments/ENCSR820GND "transcription factor,chromatin remodeller" RNF2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF015UIX https://www.encodeproject.org/files/ENCFF015UIX/@@download/ENCFF015UIX.bam ENCFF046RKA https://www.encodeproject.org/files/ENCFF046RKA/@@download/ENCFF046RKA.bam 49.6 M 0 48.4 M 0.977 PE 100 100 native 21.3 M 0.0 M 19.6 M 0.789 0.92 0.92 11.66 200 1.09 3.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/eed44808-e5ed-4730-aba9-0e295d5a2096/@@download/cross_correlation_plot/ENCFF307RHEENCFF250LUM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB279KNJ michael-snyder:L-1846 "ENCFF307RHE,ENCFF250LUM" HiSeq 2000 2016-10-09T17:12:04.188603+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zY80jv1xPyfX78Yz4gg3 ENCSR414TYY https://www.encodeproject.org/experiments/ENCSR414TYY transcription factor RUNX1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF548STV https://www.encodeproject.org/files/ENCFF548STV/@@download/ENCFF548STV.bam ENCFF289BJO https://www.encodeproject.org/files/ENCFF289BJO/@@download/ENCFF289BJO.bam 65.1 M 0 63.8 M 0.979 PE 100 100 native 28.8 M 0.0 M 20.0 M 0.613 0.69 0.68 2.95 185 1.12 10.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/c299d734-dfa8-4bb2-bfa0-7b9575472b90/@@download/cross_correlation_plot/ENCFF002DOZENCFF002EGE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB991KIJ michael-snyder:672_B_TruSeq_ATCACG "ENCFF002DOZ,ENCFF002EGE" HiSeq 2000 2016-10-09T17:05:25.543652+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Q180jv1XvFGkBjjfjQgp ENCSR414TYY https://www.encodeproject.org/experiments/ENCSR414TYY transcription factor RUNX1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF350NUJ https://www.encodeproject.org/files/ENCFF350NUJ/@@download/ENCFF350NUJ.bam ENCFF659VBT https://www.encodeproject.org/files/ENCFF659VBT/@@download/ENCFF659VBT.bam 70.7 M 0 69.3 M 0.981 PE 100 100 native 31.3 M 0.0 M 27.4 M 0.775 0.87 0.87 7.77 175 1.09 7.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1424c63-a0e0-4448-b1c5-992e5b092f61/@@download/cross_correlation_plot/ENCFF002EGDENCFF002DPH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB240LOR michael-snyder:672_B_TruSeq_CGATGT "ENCFF002EGD,ENCFF002DPH" HiSeq 2000 2016-10-09T17:06:31.760266+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Q300jv1QxJBfj5Zb2q2Y ENCSR920BLG https://www.encodeproject.org/experiments/ENCSR920BLG transcription factor SIN3A-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF315DZX https://www.encodeproject.org/files/ENCFF315DZX/@@download/ENCFF315DZX.bam ENCFF706HJC https://www.encodeproject.org/files/ENCFF706HJC/@@download/ENCFF706HJC.bam 27.2 M 0 25.9 M 0.952 SE 36 36 native 0.0 M 19.4 M 19.0 M 0.696 0.98 0.98 41.62 115 1.07 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/51441994-269b-4316-b79d-33a509d6fad1/@@download/cross_correlation_plot/ENCFF002EWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB932WDR michael-snyder:SIN3A_NB600-1263_K562_Rep1 ENCFF002EWE Illumina Genome Analyzer IIx 2016-10-09T17:01:33.797722+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6KFQ0jv1QxJBfj5Zb2q98 ENCSR920BLG https://www.encodeproject.org/experiments/ENCSR920BLG transcription factor SIN3A-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF385PRZ https://www.encodeproject.org/files/ENCFF385PRZ/@@download/ENCFF385PRZ.bam ENCFF900RPG https://www.encodeproject.org/files/ENCFF900RPG/@@download/ENCFF900RPG.bam 25.5 M 0 25.0 M 0.978 SE 36 36 native 0.0 M 19.0 M 10.7 M 0.420 0.57 0.52 1.82 105 1.07 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/b31ca8e8-d574-4e27-bb11-bec8d05874dd/@@download/cross_correlation_plot/ENCFF002EWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB698ZHC michael-snyder:SIN3A_NB600-1263_K562_Rep2 ENCFF002EWJ Illumina Genome Analyzer IIx 2016-10-09T17:01:26.335819+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6KJ80jv1zBYbxYJ5zzzvB ENCSR657JLK https://www.encodeproject.org/experiments/ENCSR657JLK transcription factor SIN3B-human K562 immortalized cell line 5 michael-snyder ENCODE3 GRCh38 ENCFF323OVV https://www.encodeproject.org/files/ENCFF323OVV/@@download/ENCFF323OVV.bam ENCFF046NKU https://www.encodeproject.org/files/ENCFF046NKU/@@download/ENCFF046NKU.bam 76.8 M 0 59.3 M 0.772 PE 100 100 native 26.1 M 0.0 M 13.3 M 0.347 0.51 0.51 2.06 190 1.19 4.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9e8fbbe-40ae-47a5-b1bf-a864634b046e/@@download/cross_correlation_plot/ENCFF526SSVENCFF953OIR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB035NEJ michael-snyder:L-3133 "ENCFF526SSV,ENCFF953OIR" HiSeq 4000 2017-01-28T04:50:10.493169+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kB2003696P60X14GXxbFv ENCSR657JLK https://www.encodeproject.org/experiments/ENCSR657JLK transcription factor SIN3B-human K562 immortalized cell line 6 michael-snyder ENCODE3 GRCh38 ENCFF050VHP https://www.encodeproject.org/files/ENCFF050VHP/@@download/ENCFF050VHP.bam ENCFF348VWO https://www.encodeproject.org/files/ENCFF348VWO/@@download/ENCFF348VWO.bam 65.3 M 0 56.4 M 0.863 PE 100 100 native 25.1 M 0.0 M 14.7 M 0.450 0.59 0.59 2.47 205 1.27 3.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4db358a-3a68-4de7-9ead-d800b16e86ad/@@download/cross_correlation_plot/ENCFF044ZTQENCFF119GEQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB265USE michael-snyder:L-3134 "ENCFF044ZTQ,ENCFF119GEQ" HiSeq 4000 2017-01-28T04:50:21.602717+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25kBz003690Y3fv13Vv49bx ENCSR336DXE https://www.encodeproject.org/experiments/ENCSR336DXE transcription factor SKIL-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF141XAC https://www.encodeproject.org/files/ENCFF141XAC/@@download/ENCFF141XAC.bam ENCFF606QOR https://www.encodeproject.org/files/ENCFF606QOR/@@download/ENCFF606QOR.bam 85.3 M 0 81.8 M 0.960 PE 100 100 native 36.6 M 0.0 M 32.5 M 0.761 0.89 0.89 8.78 250 1.08 3.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/4080d0c2-6811-453d-a2e1-c2c283c04058/@@download/cross_correlation_plot/ENCFF493LNWENCFF310DAJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB491EZI michael-snyder:L-473 "ENCFF493LNW,ENCFF310DAJ" HiSeq 2000 2016-10-09T17:16:03.452427+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40y80jv1xPyfX78Yz4gj0 ENCSR336DXE https://www.encodeproject.org/experiments/ENCSR336DXE transcription factor SKIL-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF995IZW https://www.encodeproject.org/files/ENCFF995IZW/@@download/ENCFF995IZW.bam ENCFF824GQY https://www.encodeproject.org/files/ENCFF824GQY/@@download/ENCFF824GQY.bam 72.0 M 0 70.6 M 0.981 PE 100 100 native 31.2 M 0.0 M 28.2 M 0.783 0.90 0.90 10.20 185 1.09 3.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/853df21d-73d7-4560-aaa1-983abbd32189/@@download/cross_correlation_plot/ENCFF411JNOENCFF138KRI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB295RTL michael-snyder:L-148 "ENCFF138KRI,ENCFF411JNO" HiSeq 2000 2016-10-09T17:13:42.843108+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40zj0jv1XvFGkBjjfjQ6b ENCSR189PYJ https://www.encodeproject.org/experiments/ENCSR189PYJ transcription factor SMAD2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF257QQX https://www.encodeproject.org/files/ENCFF257QQX/@@download/ENCFF257QQX.bam ENCFF939IYF https://www.encodeproject.org/files/ENCFF939IYF/@@download/ENCFF939IYF.bam 24.8 M 0 22.6 M 0.910 SE 36 36 native 0.0 M 17.0 M 15.8 M 0.638 0.94 0.94 15.66 125 1.03 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/f34402ef-66af-4556-ba25-12a792ab0e80/@@download/cross_correlation_plot/ENCFF002EBP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB583AAU michael-snyder:SMAD2_600-401-A59_K562_Rep1 ENCFF002EBP Illumina Genome Analyzer IIx 2016-10-09T17:09:37.403163+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3q980jv1xPyfX78Yz4gXZ ENCSR189PYJ https://www.encodeproject.org/experiments/ENCSR189PYJ transcription factor SMAD2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF925CYF https://www.encodeproject.org/files/ENCFF925CYF/@@download/ENCFF925CYF.bam ENCFF610XND https://www.encodeproject.org/files/ENCFF610XND/@@download/ENCFF610XND.bam 30.5 M 0 29.8 M 0.977 SE 36 36 native 0.0 M 22.7 M 19.8 M 0.650 0.88 0.88 7.89 130 1.03 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/6cf41183-6b89-4029-9270-370c94b59709/@@download/cross_correlation_plot/ENCFF002EBV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB009VYH michael-snyder:SMAD2_600-401-A59_Rb_K562_Rep2 ENCFF002EBV Illumina Genome Analyzer IIx 2016-10-09T17:09:59.557837+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qBQ0jv1XYYX2Fxk3f4fj ENCSR104AZQ https://www.encodeproject.org/experiments/ENCSR104AZQ transcription factor SMARCA2-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR000EHO https://www.encodeproject.org/experiments/ENCSR000EHO transcription factor SMARCA4-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF670DXN https://www.encodeproject.org/files/ENCFF670DXN/@@download/ENCFF670DXN.bam ENCFF756ADE https://www.encodeproject.org/files/ENCFF756ADE/@@download/ENCFF756ADE.bam 15.4 M 0 13.7 M 0.891 SE 28 28 28 0.0 M 10.0 M 9.5 M 0.615 0.95 0.95 20.39 100 1.05 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9fed019-cf68-445a-93d3-99d6e0e2775a/@@download/cross_correlation_plot/ENCFF000YHK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQV ENCFF000YHK Illumina Genome Analyzer 2017-01-05T21:25:25.205560+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7pk80369PjBfKG4QzQx27 ENCSR000EHO https://www.encodeproject.org/experiments/ENCSR000EHO transcription factor SMARCA4-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF035WPI https://www.encodeproject.org/files/ENCFF035WPI/@@download/ENCFF035WPI.bam ENCFF769SAO https://www.encodeproject.org/files/ENCFF769SAO/@@download/ENCFF769SAO.bam 17.9 M 0 16.6 M 0.923 SE 28 28 28 0.0 M 12.4 M 11.2 M 0.626 0.91 0.91 10.89 100 1.03 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/958f81fe-13e6-411d-95b7-0ae9beb9b41c/@@download/cross_correlation_plot/ENCFF000YHJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AHN ENCFF000YHJ Illumina Genome Analyzer 2017-01-05T21:22:35.647835+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7pz00369J2YG2G5JGYVgf ENCSR587OQL https://www.encodeproject.org/experiments/ENCSR587OQL transcription factor SMARCA4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF350FCE https://www.encodeproject.org/files/ENCFF350FCE/@@download/ENCFF350FCE.bam ENCFF286YAW https://www.encodeproject.org/files/ENCFF286YAW/@@download/ENCFF286YAW.bam 51.0 M 0 50.0 M 0.981 PE 100 100 native 22.2 M 0.0 M 20.2 M 0.793 0.91 0.91 10.92 205 1.33 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/85b04088-91dc-4a14-9522-3e75bef10e36/@@download/cross_correlation_plot/ENCFF793GYQENCFF444MWP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB798DKB michael-snyder:L-1839 "ENCFF793GYQ,ENCFF444MWP" HiSeq 2000 2016-10-09T17:06:00.537619+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Fqj0jv1XvFGkBjjfjV0g ENCSR587OQL https://www.encodeproject.org/experiments/ENCSR587OQL transcription factor SMARCA4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF744TCZ https://www.encodeproject.org/files/ENCFF744TCZ/@@download/ENCFF744TCZ.bam ENCFF936WLL https://www.encodeproject.org/files/ENCFF936WLL/@@download/ENCFF936WLL.bam 64.2 M 0 62.8 M 0.978 PE 100 100 native 27.7 M 0.0 M 26.5 M 0.826 0.96 0.96 23.07 190 1.15 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cad5735-98cb-4884-8c27-c767b8974bb1/@@download/cross_correlation_plot/ENCFF310JLMENCFF670FTR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB243QBC michael-snyder:L-1840 "ENCFF670FTR,ENCFF310JLM" HiSeq 2000 2016-10-09T17:07:05.218363+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Fy00jv1xPyfX78Yz4jY6 ENCSR643VTW https://www.encodeproject.org/experiments/ENCSR643VTW transcription factor SMARCA4-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF606LUD https://www.encodeproject.org/files/ENCFF606LUD/@@download/ENCFF606LUD.bam ENCFF228IMW https://www.encodeproject.org/files/ENCFF228IMW/@@download/ENCFF228IMW.bam 68.3 M 0 67.1 M 0.983 PE 100 100 native 29.6 M 0.0 M 28.6 M 0.837 0.97 0.97 28.76 195 1.10 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/279aee57-7db6-4a3d-990e-dcdf21ddbd5a/@@download/cross_correlation_plot/ENCFF281JRRENCFF538IMN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB019JZA michael-snyder:L-1756 "ENCFF538IMN,ENCFF281JRR" HiSeq 2000 2016-10-09T17:14:32.284008+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yB80jv1QxJBfj5Zb2pQY ENCSR643VTW https://www.encodeproject.org/experiments/ENCSR643VTW transcription factor SMARCA4-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF157HYJ https://www.encodeproject.org/files/ENCFF157HYJ/@@download/ENCFF157HYJ.bam ENCFF773FLB https://www.encodeproject.org/files/ENCFF773FLB/@@download/ENCFF773FLB.bam 50.8 M 0 49.1 M 0.966 PE 100 100 native 21.4 M 0.0 M 20.5 M 0.808 0.96 0.96 23.34 205 1.18 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/8abbd713-76dd-4544-932c-af8bcdc6e0e9/@@download/cross_correlation_plot/ENCFF218VUSENCFF890WRL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB242HBT michael-snyder:L-1757 "ENCFF890WRL,ENCFF218VUS" HiSeq 2000 2016-10-09T17:12:59.838900+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yFj0jv1XvFGkBjjfjQ4b ENCSR895HSJ https://www.encodeproject.org/experiments/ENCSR895HSJ transcription factor SMARCA5-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF914TEL https://www.encodeproject.org/files/ENCFF914TEL/@@download/ENCFF914TEL.bam ENCFF687TMY https://www.encodeproject.org/files/ENCFF687TMY/@@download/ENCFF687TMY.bam 79.3 M 0 77.2 M 0.973 PE 100 100 native 34.1 M 0.0 M 33.4 M 0.842 0.98 0.98 53.19 215 1.07 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/c74ae667-93f0-4a40-bbbe-eee5d492b294/@@download/cross_correlation_plot/ENCFF444TNLENCFF247XZL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB283URL michael-snyder:L-2015 "ENCFF247XZL,ENCFF444TNL" HiSeq 2000 2016-10-09T17:14:29.094562+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3f6j0jv1QxJBfj5Zb2pBq ENCSR895HSJ https://www.encodeproject.org/experiments/ENCSR895HSJ transcription factor SMARCA5-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF122TGF https://www.encodeproject.org/files/ENCFF122TGF/@@download/ENCFF122TGF.bam ENCFF661WUX https://www.encodeproject.org/files/ENCFF661WUX/@@download/ENCFF661WUX.bam 69.9 M 0 68.3 M 0.977 PE 100 100 native 30.2 M 0.0 M 29.8 M 0.852 0.99 0.99 73.70 220 1.06 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7f7998f-0270-4bd3-b3a7-dd469b1b3455/@@download/cross_correlation_plot/ENCFF387THVENCFF975TEJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB554TAC michael-snyder:L-2016 "ENCFF975TEJ,ENCFF387THV" HiSeq 2000 2016-10-09T17:13:49.068598+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3f8Q0jv1zBYbxYJ5zzypK ENCSR000EHN https://www.encodeproject.org/experiments/ENCSR000EHN transcription factor SMARCB1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF009UJV https://www.encodeproject.org/files/ENCFF009UJV/@@download/ENCFF009UJV.bam ENCFF498WIP https://www.encodeproject.org/files/ENCFF498WIP/@@download/ENCFF498WIP.bam 18.7 M 0 17.1 M 0.917 SE 28 28 28 0.0 M 12.7 M 12.0 M 0.641 0.94 0.94 16.94 90 1.03 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/7079b924-c10e-455c-af7b-580f13a1b3ce/@@download/cross_correlation_plot/ENCFF000YQK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGT ENCFF000YQK Illumina Genome Analyzer 2017-01-05T21:21:13.186568+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7qv003699GG65G542pjbB ENCSR000EHN https://www.encodeproject.org/experiments/ENCSR000EHN transcription factor SMARCB1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF172VKS https://www.encodeproject.org/files/ENCFF172VKS/@@download/ENCFF172VKS.bam ENCFF202MXB https://www.encodeproject.org/files/ENCFF202MXB/@@download/ENCFF202MXB.bam 18.9 M 0 17.7 M 0.934 SE 28 28 28 0.0 M 13.4 M 12.7 M 0.671 0.95 0.95 18.54 90 1.03 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/210657a7-3008-42d1-8354-75ecf15fb7bb/@@download/cross_correlation_plot/ENCFF000YQL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGU ENCFF000YQL Illumina Genome Analyzer 2017-01-05T21:21:10.006483+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7v2003697FPkPG58gbpbv ENCSR519WMW https://www.encodeproject.org/experiments/ENCSR519WMW transcription factor SMARCC2-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR157TCS https://www.encodeproject.org/experiments/ENCSR157TCS transcription factor SMARCE1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF387BDW https://www.encodeproject.org/files/ENCFF387BDW/@@download/ENCFF387BDW.bam ENCFF269YDC https://www.encodeproject.org/files/ENCFF269YDC/@@download/ENCFF269YDC.bam 62.0 M 0 56.2 M 0.906 PE 100 100 native 24.6 M 0.0 M 22.0 M 0.710 0.90 0.90 9.79 210 1.22 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/3015a078-d7b8-4ee6-8c66-856f1d46a9b3/@@download/cross_correlation_plot/ENCFF034ESFENCFF668WFT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB611UDM michael-snyder:L-1984 "ENCFF034ESF,ENCFF668WFT" HiSeq 2000 2016-10-09T17:03:53.703067+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Y000jv1QxJBfj5Zb2q56 ENCSR157TCS https://www.encodeproject.org/experiments/ENCSR157TCS transcription factor SMARCE1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF294UTM https://www.encodeproject.org/files/ENCFF294UTM/@@download/ENCFF294UTM.bam ENCFF816RJG https://www.encodeproject.org/files/ENCFF816RJG/@@download/ENCFF816RJG.bam 57.6 M 0 53.2 M 0.922 PE 100 100 native 23.4 M 0.0 M 21.9 M 0.760 0.94 0.94 15.34 210 1.15 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/653f1e1a-1da3-4594-94d5-a92b0fd6a282/@@download/cross_correlation_plot/ENCFF615EVJENCFF531SYI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB108AIV michael-snyder:L-1985 "ENCFF615EVJ,ENCFF531SYI" HiSeq 2000 2016-10-09T17:03:24.840212+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Y1Q0jv1zBYbxYJ5zzzZb ENCSR000EGW https://www.encodeproject.org/experiments/ENCSR000EGW transcription factor SMC3-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF355PQK https://www.encodeproject.org/files/ENCFF355PQK/@@download/ENCFF355PQK.bam ENCFF353WBI https://www.encodeproject.org/files/ENCFF353WBI/@@download/ENCFF353WBI.bam 14.5 M 0 12.7 M 0.874 SE 36 36 native 0.0 M 9.5 M 9.2 M 0.630 0.97 0.97 40.13 115 1.35 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5c303e4-b18b-4d9b-a9f0-b7e1a692b7df/@@download/cross_correlation_plot/ENCFF000YZX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOU ENCFF000YZX Illumina Genome Analyzer 2016-12-10T21:09:25.524175+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1638XQ03697K4B1J71pxzj4 ENCSR000EGW https://www.encodeproject.org/experiments/ENCSR000EGW transcription factor SMC3-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF365BCR https://www.encodeproject.org/files/ENCFF365BCR/@@download/ENCFF365BCR.bam ENCFF271XMG https://www.encodeproject.org/files/ENCFF271XMG/@@download/ENCFF271XMG.bam 16.3 M 0 15.1 M 0.922 SE 36 36 native 0.0 M 11.4 M 11.2 M 0.685 0.98 0.98 60.22 115 1.22 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/363bd809-2a1a-4496-a85f-e455c1433e70/@@download/cross_correlation_plot/ENCFF000YZY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOH ENCFF000YZY Illumina Genome Analyzer 2016-12-10T21:26:26.667143+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1638gQ03697K4B1J71pxzjJ ENCSR654CQU https://www.encodeproject.org/experiments/ENCSR654CQU "RNA binding protein,transcription factor" SNIP1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF519OGB https://www.encodeproject.org/files/ENCFF519OGB/@@download/ENCFF519OGB.bam ENCFF998KXK https://www.encodeproject.org/files/ENCFF998KXK/@@download/ENCFF998KXK.bam 54.8 M 0 52.2 M 0.953 PE 100 100 native 21.8 M 0.0 M 19.0 M 0.693 0.87 0.87 7.53 190 1.12 3.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/80244040-b3a4-400a-8bf5-da945ccf4e97/@@download/cross_correlation_plot/ENCFF165NMWENCFF411TJB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB035RSS michael-snyder:L-156 "ENCFF411TJB,ENCFF165NMW" HiSeq 2000 2016-10-09T17:13:13.888496+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yX80jv1XYYX2Fxk3f4pq ENCSR654CQU https://www.encodeproject.org/experiments/ENCSR654CQU "RNA binding protein,transcription factor" SNIP1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF883BFY https://www.encodeproject.org/files/ENCFF883BFY/@@download/ENCFF883BFY.bam ENCFF203EVC https://www.encodeproject.org/files/ENCFF203EVC/@@download/ENCFF203EVC.bam 59.2 M 0 57.2 M 0.966 PE 100 100 native 24.7 M 0.0 M 21.0 M 0.708 0.85 0.85 6.44 170 1.12 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/52068409-1ba8-4bdb-8fed-6b3435b2bdfb/@@download/cross_correlation_plot/ENCFF663NBIENCFF667DGY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB996ZEB michael-snyder:L-169 "ENCFF663NBI,ENCFF667DGY" HiSeq 2000 2016-10-09T17:14:11.713791+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yYj0jv1XYYX2Fxk3f4q3 ENCSR788RSW https://www.encodeproject.org/experiments/ENCSR788RSW transcription factor SOX6-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF508MVS https://www.encodeproject.org/files/ENCFF508MVS/@@download/ENCFF508MVS.bam ENCFF158AUC https://www.encodeproject.org/files/ENCFF158AUC/@@download/ENCFF158AUC.bam 97.6 M 0 93.6 M 0.960 PE 100 100 native 42.2 M 0.0 M 36.3 M 0.744 0.86 0.86 6.90 170 1.14 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fb72496-9956-4042-ac70-35fc0e19f731/@@download/cross_correlation_plot/ENCFF002DPJENCFF002EGF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB788HDH michael-snyder:734_A_TruSeq_CAGATC "ENCFF002EGF,ENCFF002DPJ" HiSeq 2000 2016-10-29T18:09:34.207951+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B27X80jv1pX1xqb1B8192B ENCSR788RSW https://www.encodeproject.org/experiments/ENCSR788RSW transcription factor SOX6-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF022LJH https://www.encodeproject.org/files/ENCFF022LJH/@@download/ENCFF022LJH.bam ENCFF244NNS https://www.encodeproject.org/files/ENCFF244NNS/@@download/ENCFF244NNS.bam 88.9 M 0 85.5 M 0.962 PE 100 100 native 38.6 M 0.0 M 33.1 M 0.745 0.86 0.86 6.79 190 1.21 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5e75ee0-2be5-4c3f-87ed-41daf9aeba55/@@download/cross_correlation_plot/ENCFF002DUAENCFF002DPM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB134QRS michael-snyder:734_A_TruSeq_GATCAG "ENCFF002DUA,ENCFF002DPM" HiSeq 2000 2016-10-29T18:10:10.697433+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B27bQ0jv1vJ6xQfbB7FXbj ENCSR991ELG https://www.encodeproject.org/experiments/ENCSR991ELG transcription factor SP1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF487SUP https://www.encodeproject.org/files/ENCFF487SUP/@@download/ENCFF487SUP.bam ENCFF644YVO https://www.encodeproject.org/files/ENCFF644YVO/@@download/ENCFF644YVO.bam 42.5 M 0 39.2 M 0.922 PE 100 100 native 17.8 M 0.0 M 16.0 M 0.753 0.90 0.90 10.03 225 1.27 2.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/cad37ce4-2bb7-42c8-a935-8b8c0e77005a/@@download/cross_correlation_plot/ENCFF002DPLENCFF002EGC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB596BXN michael-snyder:611_B_Tru-seq_CAGATC "ENCFF002DPL,ENCFF002EGC" HiSeq 2000 2016-10-09T17:00:45.775031+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4GjQ0jv1f60PxyZ9JGPGj ENCSR991ELG https://www.encodeproject.org/experiments/ENCSR991ELG transcription factor SP1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF758LME https://www.encodeproject.org/files/ENCFF758LME/@@download/ENCFF758LME.bam ENCFF362NJN https://www.encodeproject.org/files/ENCFF362NJN/@@download/ENCFF362NJN.bam 85.4 M 0 79.4 M 0.930 PE 100 100 native 35.8 M 0.0 M 30.2 M 0.707 0.84 0.84 6.08 205 1.09 3.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/89e56322-de1e-439c-b625-31b403b267f6/@@download/cross_correlation_plot/ENCFF002EGOENCFF002DPP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB040HMX michael-snyder:690_B_TruSeq_ATCACG "ENCFF002DPP,ENCFF002EGO" HiSeq 2000 2016-10-09T17:05:10.165373+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Gp80jv1QxJBfj5Zb2pzF ENCSR815ZDS https://www.encodeproject.org/experiments/ENCSR815ZDS transcription factor SREBF1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF623PVZ https://www.encodeproject.org/files/ENCFF623PVZ/@@download/ENCFF623PVZ.bam ENCFF252IYG https://www.encodeproject.org/files/ENCFF252IYG/@@download/ENCFF252IYG.bam 14.9 M 0 14.2 M 0.957 SE 36 36 native 0.0 M 10.7 M 10.2 M 0.683 0.96 0.96 23.07 90 1.04 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/d4f7641f-aff2-4692-866d-ccbf2a28137d/@@download/cross_correlation_plot/ENCFF002EEL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB820QPG michael-snyder:SREBP1_sc-8984_K562_Rep1 ENCFF002EEL Illumina Genome Analyzer IIx 2016-10-09T17:33:06.597601+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ZXQ0jv1XvFGkBjjfjQvk ENCSR815ZDS https://www.encodeproject.org/experiments/ENCSR815ZDS transcription factor SREBF1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF405EME https://www.encodeproject.org/files/ENCFF405EME/@@download/ENCFF405EME.bam ENCFF012STR https://www.encodeproject.org/files/ENCFF012STR/@@download/ENCFF012STR.bam 26.0 M 0 24.4 M 0.936 SE 36 36 native 0.0 M 18.2 M 17.5 M 0.672 0.97 0.97 30.21 90 1.04 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/30a3c809-f31b-49a0-9464-71163dffb60f/@@download/cross_correlation_plot/ENCFF002EEP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB187NCV michael-snyder:SREBP1_sc-8984_K562_Rep2 ENCFF002EEP Illumina Genome Analyzer IIx 2016-10-09T17:34:10.959230+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ZYj0jv1XvFGkBjjfjQx2 ENCSR000EHJ https://www.encodeproject.org/experiments/ENCSR000EHJ transcription factor STAT1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF173MEF https://www.encodeproject.org/files/ENCFF173MEF/@@download/ENCFF173MEF.bam ENCFF663MAR https://www.encodeproject.org/files/ENCFF663MAR/@@download/ENCFF663MAR.bam 8.5 M 0 8.2 M 0.961 SE 27 27 27 0.0 M 5.5 M 5.4 M 0.640 0.99 0.99 156.71 105 1.15 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/89f3a638-5c0c-428a-b90b-4d3355c3788b/@@download/cross_correlation_plot/ENCFF000ZAQ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUA ENCFF000ZAQ Illumina Genome Analyzer 2016-12-13T02:51:35.063021+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxYj0369BV55708G9vF9F ENCSR000EHJ https://www.encodeproject.org/experiments/ENCSR000EHJ transcription factor STAT1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF041UWI https://www.encodeproject.org/files/ENCFF041UWI/@@download/ENCFF041UWI.bam ENCFF533MWQ https://www.encodeproject.org/files/ENCFF533MWQ/@@download/ENCFF533MWQ.bam 14.5 M 0 11.3 M 0.775 SE 34 27 27 0.0 M 7.0 M 6.8 M 0.471 0.99 0.99 96.52 105 1.18 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/76b25d61-c0d1-4623-85a2-586c5392edbc/@@download/cross_correlation_plot/ENCFF000ZAR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AFA ENCFF000ZAR Illumina Genome Analyzer 2016-12-13T02:55:03.716671+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zxpj03695Kj1j8qPQj0XV ENCSR000EHK https://www.encodeproject.org/experiments/ENCSR000EHK transcription factor STAT1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF339BJP https://www.encodeproject.org/files/ENCFF339BJP/@@download/ENCFF339BJP.bam ENCFF263NHR https://www.encodeproject.org/files/ENCFF263NHR/@@download/ENCFF263NHR.bam 21.4 M 0 15.9 M 0.741 SE 27 27 27 0.0 M 10.0 M 9.8 M 0.456 0.98 0.98 55.53 105 1.11 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4d240d8-15c7-4b42-bf9d-a7c152e22031/@@download/cross_correlation_plot/ENCFF000ZBF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUJ ENCFF000ZBF Illumina Genome Analyzer 2017-02-24T16:24:01.018553+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbGYQ0369F6YF1Fkffzy3y ENCSR000EHK https://www.encodeproject.org/experiments/ENCSR000EHK transcription factor STAT1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF470IST https://www.encodeproject.org/files/ENCFF470IST/@@download/ENCFF470IST.bam ENCFF740GXI https://www.encodeproject.org/files/ENCFF740GXI/@@download/ENCFF740GXI.bam 11.5 M 0 9.3 M 0.806 SE 34 27 27 0.0 M 5.3 M 5.3 M 0.461 0.99 0.99 150.57 100 1.10 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/ece1ef9d-b122-4bc7-b42d-3cda38fb037b/@@download/cross_correlation_plot/ENCFF000ZAE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUI ENCFF000ZAE Illumina Genome Analyzer 2017-02-24T16:23:43.643858+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbGk80369F6bVG18GpzkzY ENCSR894CGX https://www.encodeproject.org/experiments/ENCSR894CGX "RNA binding protein,transcription factor" SUPT5H-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF079TBV https://www.encodeproject.org/files/ENCFF079TBV/@@download/ENCFF079TBV.bam ENCFF625EVD https://www.encodeproject.org/files/ENCFF625EVD/@@download/ENCFF625EVD.bam 58.1 M 0 57.3 M 0.985 PE 100 100 native 25.3 M 0.0 M 24.7 M 0.849 0.97 0.97 39.61 215 1.23 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/d65346cb-9a70-48f3-8715-7db48f7180c5/@@download/cross_correlation_plot/ENCFF086VLIENCFF397FZD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB054IOO michael-snyder:L-2065 "ENCFF086VLI,ENCFF397FZD" HiSeq 2000 2016-10-09T17:08:56.249130+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Bgj0jv1XYYX2Fxk3f6B7 ENCSR894CGX https://www.encodeproject.org/experiments/ENCSR894CGX "RNA binding protein,transcription factor" SUPT5H-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF772XIR https://www.encodeproject.org/files/ENCFF772XIR/@@download/ENCFF772XIR.bam ENCFF256DMO https://www.encodeproject.org/files/ENCFF256DMO/@@download/ENCFF256DMO.bam 62.2 M 0 61.3 M 0.986 PE 100 100 native 27.1 M 0.0 M 26.2 M 0.843 0.97 0.97 31.32 210 1.25 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/acb66124-539a-43d1-89f2-45ad600f5cac/@@download/cross_correlation_plot/ENCFF383EJJENCFF077SPQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB477XAS michael-snyder:L-2066 "ENCFF383EJJ,ENCFF077SPQ" HiSeq 2000 2016-10-09T17:09:17.802241+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Bkj0jv1xPyfX78Yz4jX8 ENCSR412CTM https://www.encodeproject.org/experiments/ENCSR412CTM "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF986KSB https://www.encodeproject.org/files/ENCFF986KSB/@@download/ENCFF986KSB.bam ENCFF455NNI https://www.encodeproject.org/files/ENCFF455NNI/@@download/ENCFF455NNI.bam 30.9 M 0 30.6 M 0.992 SE 36 36 native 0.0 M 23.7 M 23.0 M 0.746 0.97 0.97 38.30 115 1.04 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b67cfdb-8d0a-4bb0-9263-195928954403/@@download/cross_correlation_plot/ENCFF002EWO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB432TRR michael-snyder:SUZ12_3737_K562_Rep1 ENCFF002EWO Illumina Genome Analyzer IIx 2016-10-09T17:01:23.777594+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Q8j0jv1QxJBfj5Zb2q2v ENCSR412CTM https://www.encodeproject.org/experiments/ENCSR412CTM "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF614RBF https://www.encodeproject.org/files/ENCFF614RBF/@@download/ENCFF614RBF.bam ENCFF328YTB https://www.encodeproject.org/files/ENCFF328YTB/@@download/ENCFF328YTB.bam 27.1 M 0 26.9 M 0.990 SE 36 36 native 0.0 M 20.5 M 18.3 M 0.673 0.90 0.90 9.34 125 1.05 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e83b0d7-d224-4336-bc25-3f3f1ef2ebd0/@@download/cross_correlation_plot/ENCFF002EWP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB909AKQ michael-snyder:SUZ12_3737_K562_Rep2 ENCFF002EWP Illumina Genome Analyzer IIx 2016-10-09T17:01:24.658503+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4QB00jv1XYYX2Fxk3f5V4 ENCSR000EHB https://www.encodeproject.org/experiments/ENCSR000EHB transcription factor TAL1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF346VYS https://www.encodeproject.org/files/ENCFF346VYS/@@download/ENCFF346VYS.bam ENCFF737NMZ https://www.encodeproject.org/files/ENCFF737NMZ/@@download/ENCFF737NMZ.bam 32.1 M 0 30.1 M 0.936 SE 36 28 28 0.0 M 21.8 M 19.9 M 0.619 0.91 0.94 20.73 115 1.67 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/5399e8a1-4382-47ca-b1c7-614a9364cec9/@@download/cross_correlation_plot/ENCFF000ZBX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIZ ENCFF000ZBX Illumina Genome Analyzer 2017-01-05T21:26:11.959986+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7kb80369P4Vg0G4JKxZY5 ENCSR000EHB https://www.encodeproject.org/experiments/ENCSR000EHB transcription factor TAL1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF067SPF https://www.encodeproject.org/files/ENCFF067SPF/@@download/ENCFF067SPF.bam ENCFF688PJI https://www.encodeproject.org/files/ENCFF688PJI/@@download/ENCFF688PJI.bam 21.8 M 0 20.1 M 0.921 SE 36 28 28 0.0 M 14.5 M 13.3 M 0.607 0.91 0.95 25.89 115 2.31 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb4e6805-4c83-4c50-a9f6-79d9a5aa245f/@@download/cross_correlation_plot/ENCFF000ZBR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIY ENCFF000ZBR Illumina Genome Analyzer 2017-01-05T21:26:03.005815+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7kq00369Pyf0JG49f334b ENCSR106FRG https://www.encodeproject.org/experiments/ENCSR106FRG transcription factor TAL1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF695TZQ https://www.encodeproject.org/files/ENCFF695TZQ/@@download/ENCFF695TZQ.bam ENCFF829RRK https://www.encodeproject.org/files/ENCFF829RRK/@@download/ENCFF829RRK.bam 53.9 M 0 52.6 M 0.977 PE 100 100 native 23.3 M 0.0 M 20.5 M 0.761 0.88 0.88 8.14 205 1.58 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb63d7e8-d30c-4302-946f-92c4bbb48a2d/@@download/cross_correlation_plot/ENCFF793WFYENCFF145TXO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB983GRU michael-snyder:L-301 "ENCFF145TXO,ENCFF793WFY" HiSeq 2000 2016-10-09T17:34:35.755145+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5q000jv1x3KYJK9kQ04Yk ENCSR106FRG https://www.encodeproject.org/experiments/ENCSR106FRG transcription factor TAL1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF525CPA https://www.encodeproject.org/files/ENCFF525CPA/@@download/ENCFF525CPA.bam ENCFF793XCW https://www.encodeproject.org/files/ENCFF793XCW/@@download/ENCFF793XCW.bam 57.1 M 0 55.7 M 0.976 PE 100 100 native 24.7 M 0.0 M 22.7 M 0.794 0.92 0.92 11.83 195 2.12 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8cbb4a2-ae15-42d4-ae82-019695c7ac8a/@@download/cross_correlation_plot/ENCFF998YDAENCFF768SQO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB709SXN michael-snyder:L-302 "ENCFF998YDA,ENCFF768SQO" HiSeq 2000 2016-10-09T17:33:52.746140+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5q200jv1b6Q2yZ51Zb5GZ ENCSR033VAZ https://www.encodeproject.org/experiments/ENCSR033VAZ "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF263MBV https://www.encodeproject.org/files/ENCFF263MBV/@@download/ENCFF263MBV.bam ENCFF145DUR https://www.encodeproject.org/files/ENCFF145DUR/@@download/ENCFF145DUR.bam 80.1 M 0 78.3 M 0.977 PE 100 100 native 35.3 M 0.0 M 32.8 M 0.818 0.93 0.93 14.13 210 1.07 4.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/292aab57-99af-418b-986a-d546c9b098ae/@@download/cross_correlation_plot/ENCFF996BVXENCFF654EXQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB224WPQ michael-snyder:L-422 "ENCFF654EXQ,ENCFF996BVX" HiSeq 2000 2016-10-09T17:15:51.193168+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3z1j0jv1XYYX2Fxk3f4qX ENCSR033VAZ https://www.encodeproject.org/experiments/ENCSR033VAZ "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF860IRS https://www.encodeproject.org/files/ENCFF860IRS/@@download/ENCFF860IRS.bam ENCFF642SQY https://www.encodeproject.org/files/ENCFF642SQY/@@download/ENCFF642SQY.bam 74.7 M 0 73.9 M 0.989 PE 100 100 native 32.9 M 0.0 M 30.9 M 0.826 0.94 0.94 16.23 185 1.08 5.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/49457b9c-002d-4802-9593-e878b95b3597/@@download/cross_correlation_plot/ENCFF922VLOENCFF228EWB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB166HWY michael-snyder:L-147 "ENCFF922VLO,ENCFF228EWB" HiSeq 2000 2016-10-09T17:14:11.046409+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3z380jv1g5yGjfvVx0KqY ENCSR000EGA https://www.encodeproject.org/experiments/ENCSR000EGA transcription factor TBL1XR1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF946HWT https://www.encodeproject.org/files/ENCFF946HWT/@@download/ENCFF946HWT.bam ENCFF397AQJ https://www.encodeproject.org/files/ENCFF397AQJ/@@download/ENCFF397AQJ.bam 30.6 M 0 29.6 M 0.967 SE 36 36 native 0.0 M 21.9 M 21.4 M 0.700 0.98 0.98 51.88 115 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4773515-a0d3-4630-98b3-73783be5a227/@@download/cross_correlation_plot/ENCFF000ZAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ANH ENCFF000ZAY Illumina Genome Analyzer 2016-12-10T19:14:54.933257+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16294Q03697xKX68qyy2k3b ENCSR000EGA https://www.encodeproject.org/experiments/ENCSR000EGA transcription factor TBL1XR1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF964COC https://www.encodeproject.org/files/ENCFF964COC/@@download/ENCFF964COC.bam ENCFF769NEJ https://www.encodeproject.org/files/ENCFF769NEJ/@@download/ENCFF769NEJ.bam 27.0 M 0 26.0 M 0.962 SE 36 36 native 0.0 M 18.9 M 18.6 M 0.690 0.98 0.98 66.63 90 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b514e27-afbe-4a53-880c-022268f1eb09/@@download/cross_correlation_plot/ENCFF000ZBA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQR ENCFF000ZBA Illumina Genome Analyzer 2016-12-10T17:48:43.362018+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1629900369Bxb30J6x5bYyF ENCSR000EGB https://www.encodeproject.org/experiments/ENCSR000EGB transcription factor TBL1XR1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF188QGH https://www.encodeproject.org/files/ENCFF188QGH/@@download/ENCFF188QGH.bam ENCFF015ZXF https://www.encodeproject.org/files/ENCFF015ZXF/@@download/ENCFF015ZXF.bam 28.4 M 0 27.9 M 0.980 SE 36 36 native 0.0 M 21.7 M 20.6 M 0.723 0.95 0.95 20.64 110 1.07 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/bfaa8b5d-d9f6-40dc-be03-6aaf9472484d/@@download/cross_correlation_plot/ENCFF000ZBH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALQ ENCFF000ZBH Illumina Genome Analyzer 2016-12-10T18:01:10.850728+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1629Kj03690xXYVJ7Fj2bq9 ENCSR000EGB https://www.encodeproject.org/experiments/ENCSR000EGB transcription factor TBL1XR1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF719NDH https://www.encodeproject.org/files/ENCFF719NDH/@@download/ENCFF719NDH.bam ENCFF298NWW https://www.encodeproject.org/files/ENCFF298NWW/@@download/ENCFF298NWW.bam 39.8 M 0 38.6 M 0.969 SE 36 36 native 0.0 M 30.1 M 27.1 M 0.682 0.90 0.90 9.80 125 1.05 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4ae39d2-a182-4fce-b38f-e84789918c72/@@download/cross_correlation_plot/ENCFF000ZBJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALO ENCFF000ZBJ Illumina Genome Analyzer 2016-12-10T19:15:33.862579+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1629YQ03692BKq0F3V3jFK0 ENCSR000EHA https://www.encodeproject.org/experiments/ENCSR000EHA transcription factor TBP-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF835GHC https://www.encodeproject.org/files/ENCFF835GHC/@@download/ENCFF835GHC.bam ENCFF631NGI https://www.encodeproject.org/files/ENCFF631NGI/@@download/ENCFF631NGI.bam 24.7 M 0 22.4 M 0.907 SE 36 28 28 0.0 M 14.8 M 13.1 M 0.530 0.90 0.95 24.12 120 1.65 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/42c245e2-74e1-44a6-b2d6-acaef94c09d2/@@download/cross_correlation_plot/ENCFF000ZCA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATE ENCFF000ZCA Illumina Genome Analyzer 2017-01-05T21:26:07.923241+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7p1Q03697J9fxG4f90kZQ ENCSR000EHA https://www.encodeproject.org/experiments/ENCSR000EHA transcription factor TBP-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF572IXE https://www.encodeproject.org/files/ENCFF572IXE/@@download/ENCFF572IXE.bam ENCFF652UJM https://www.encodeproject.org/files/ENCFF652UJM/@@download/ENCFF652UJM.bam 27.8 M 0 25.0 M 0.898 SE 36 28 28 0.0 M 17.0 M 15.2 M 0.547 0.90 0.95 23.32 110 1.45 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/b2faba8d-c254-46e4-ad30-f95674390769/@@download/cross_correlation_plot/ENCFF000ZBZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AUF ENCFF000ZBZ Illumina Genome Analyzer 2017-01-05T21:25:45.370219+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7p700369P4Vg0G4JKxZYQ ENCSR189TRZ https://www.encodeproject.org/experiments/ENCSR189TRZ transcription factor TCF12-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF283SLJ https://www.encodeproject.org/files/ENCFF283SLJ/@@download/ENCFF283SLJ.bam ENCFF362IGC https://www.encodeproject.org/files/ENCFF362IGC/@@download/ENCFF362IGC.bam 60.2 M 0 57.1 M 0.948 PE 100 100 native 24.9 M 0.0 M 23.6 M 0.783 0.95 0.95 18.86 215 1.13 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/d22a1a13-3e3e-4403-b3b4-ba90a9c38a74/@@download/cross_correlation_plot/ENCFF043MCWENCFF520WVU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB631MXP michael-snyder:L-2165 "ENCFF520WVU,ENCFF043MCW" HiSeq 2000 2017-01-26T00:01:52.173432+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB280369F2pz096jxpg9j ENCSR189TRZ https://www.encodeproject.org/experiments/ENCSR189TRZ transcription factor TCF12-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF532BVM https://www.encodeproject.org/files/ENCFF532BVM/@@download/ENCFF532BVM.bam ENCFF413MNX https://www.encodeproject.org/files/ENCFF413MNX/@@download/ENCFF413MNX.bam 72.7 M 0 68.2 M 0.939 PE 100 100 native 29.4 M 0.0 M 27.5 M 0.757 0.94 0.94 15.80 200 1.14 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/33a0ba29-da2e-41b4-970f-991bdad6532e/@@download/cross_correlation_plot/ENCFF007HDSENCFF873EXA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB547ZUO michael-snyder:L-2166 "ENCFF873EXA,ENCFF007HDS" HiSeq 2000 2017-01-26T01:05:13.943280+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBy00369BQ3qg2vYVZ66Y ENCSR744WOO https://www.encodeproject.org/experiments/ENCSR744WOO transcription factor TCF12-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF715AOC https://www.encodeproject.org/files/ENCFF715AOC/@@download/ENCFF715AOC.bam ENCFF460BPQ https://www.encodeproject.org/files/ENCFF460BPQ/@@download/ENCFF460BPQ.bam 51.2 M 0 50.5 M 0.985 PE 100 100 native 22.5 M 0.0 M 20.6 M 0.803 0.92 0.92 11.66 205 2.11 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/056320f4-0ac8-4db2-b12a-d2c7d68c7bae/@@download/cross_correlation_plot/ENCFF017IMJENCFF349MIY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB041JMU michael-snyder:L-2155 "ENCFF017IMJ,ENCFF349MIY" HiSeq 2000 2017-01-25T22:53:42.184211+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9600369JfyJjG08Y0b7Z ENCSR744WOO https://www.encodeproject.org/experiments/ENCSR744WOO transcription factor TCF12-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF516TOF https://www.encodeproject.org/files/ENCFF516TOF/@@download/ENCFF516TOF.bam ENCFF388ZQS https://www.encodeproject.org/files/ENCFF388ZQS/@@download/ENCFF388ZQS.bam 63.7 M 0 62.7 M 0.984 PE 100 100 native 27.7 M 0.0 M 26.2 M 0.821 0.95 0.95 18.13 190 1.48 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/74b31c07-20e7-465d-889a-36c2ee0dcfb2/@@download/cross_correlation_plot/ENCFF920GYMENCFF171QIU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB527OEI michael-snyder:L-2156 "ENCFF171QIU,ENCFF920GYM" HiSeq 2000 2017-01-26T00:33:57.957580+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB6803693Jf2v97QJ7bB0 ENCSR888XZK https://www.encodeproject.org/experiments/ENCSR888XZK transcription factor TCF7L2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF425MJK https://www.encodeproject.org/files/ENCFF425MJK/@@download/ENCFF425MJK.bam ENCFF362LTA https://www.encodeproject.org/files/ENCFF362LTA/@@download/ENCFF362LTA.bam 35.2 M 0 31.0 M 0.878 SE 36 36 native 0.0 M 23.5 M 15.9 M 0.452 0.69 0.67 2.81 125 1.11 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/3faca8f7-2ebf-4839-ba26-ffb4ea64d69e/@@download/cross_correlation_plot/ENCFF002EWU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB897EPQ michael-snyder:TCF4_2569_K562_Rep1 ENCFF002EWU Illumina Genome Analyzer IIx 2016-10-09T17:00:10.086091+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XGj0jv1xPyfX78Yz4jGQ ENCSR888XZK https://www.encodeproject.org/experiments/ENCSR888XZK transcription factor TCF7L2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF600TNR https://www.encodeproject.org/files/ENCFF600TNR/@@download/ENCFF600TNR.bam ENCFF127SRR https://www.encodeproject.org/files/ENCFF127SRR/@@download/ENCFF127SRR.bam 29.5 M 0 23.5 M 0.798 SE 36 36 native 0.0 M 18.0 M 16.3 M 0.555 0.91 0.91 11.23 120 1.05 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d14a898-65aa-4b47-a958-398f9a203a33/@@download/cross_correlation_plot/ENCFF002EWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB687QGX michael-snyder:TCF4_2569_K562_Rep2 ENCFF002EWK Illumina Genome Analyzer IIx 2016-10-09T16:59:46.274356+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XK00jv1f60PxyZ9JGPVK ENCSR264CZJ https://www.encodeproject.org/experiments/ENCSR264CZJ transcription factor THRA-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF574EKT https://www.encodeproject.org/files/ENCFF574EKT/@@download/ENCFF574EKT.bam ENCFF244GIS https://www.encodeproject.org/files/ENCFF244GIS/@@download/ENCFF244GIS.bam 74.7 M 0 66.6 M 0.891 PE 100 100 native 28.7 M 0.0 M 20.3 M 0.543 0.71 0.71 3.39 230 1.07 5.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf7a6dff-797f-44e5-b1b7-b622a122d0f7/@@download/cross_correlation_plot/ENCFF695OJNENCFF405EAB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB921LQN michael-snyder:L-2027 "ENCFF695OJN,ENCFF405EAB" HiSeq 4000 2016-09-16T03:19:55.727127+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZY00369Fb155KvKP919v ENCSR264CZJ https://www.encodeproject.org/experiments/ENCSR264CZJ transcription factor THRA-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF749BVC https://www.encodeproject.org/files/ENCFF749BVC/@@download/ENCFF749BVC.bam ENCFF446AVI https://www.encodeproject.org/files/ENCFF446AVI/@@download/ENCFF446AVI.bam 116.6 M 0 105.9 M 0.909 PE 100 100 native 45.8 M 0.0 M 34.6 M 0.593 0.76 0.76 4.06 220 1.05 3.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb891660-79cd-472f-8e8e-6b68b6c99d1e/@@download/cross_correlation_plot/ENCFF097JYZENCFF499VMV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB304OIE michael-snyder:L-2028 "ENCFF499VMV,ENCFF097JYZ" HiSeq 4000 2016-09-16T03:21:18.927872+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZfQ0369Fb155KvKP91B7 ENCSR871TKJ https://www.encodeproject.org/experiments/ENCSR871TKJ "RNA binding protein,transcription factor" THRAP3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF446HGS https://www.encodeproject.org/files/ENCFF446HGS/@@download/ENCFF446HGS.bam ENCFF521ZUC https://www.encodeproject.org/files/ENCFF521ZUC/@@download/ENCFF521ZUC.bam 135.9 M 0 130.5 M 0.960 PE 100 100 native 56.9 M 0.0 M 50.5 M 0.744 0.89 0.89 8.82 200 1.04 4.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/fcb68b14-2c59-462a-80f3-4b89f99af6d5/@@download/cross_correlation_plot/ENCFF814WTWENCFF975CDD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB248NVD michael-snyder:L-2149 "ENCFF975CDD,ENCFF814WTW" HiSeq 4000 2016-10-27T22:19:01.575004+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08byQj03695YX1xgJBKFkxY ENCSR871TKJ https://www.encodeproject.org/experiments/ENCSR871TKJ "RNA binding protein,transcription factor" THRAP3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF406TJQ https://www.encodeproject.org/files/ENCFF406TJQ/@@download/ENCFF406TJQ.bam ENCFF561FQQ https://www.encodeproject.org/files/ENCFF561FQQ/@@download/ENCFF561FQQ.bam 154.3 M 0 145.9 M 0.946 PE 100 100 native 63.4 M 0.0 M 54.4 M 0.706 0.86 0.86 6.98 205 1.04 3.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d897d8e-525f-4bff-b6c2-83781a10c985/@@download/cross_correlation_plot/ENCFF484TAPENCFF251TJX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB361EOC michael-snyder:L-2150 "ENCFF484TAP,ENCFF251TJX" HiSeq 4000 2016-10-27T22:18:35.429688+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08byZ0036923z1QYVBPp85y ENCSR213HBY https://www.encodeproject.org/experiments/ENCSR213HBY RNA binding protein TOE1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF988ZHP https://www.encodeproject.org/files/ENCFF988ZHP/@@download/ENCFF988ZHP.bam ENCFF511LLL https://www.encodeproject.org/files/ENCFF511LLL/@@download/ENCFF511LLL.bam 118.7 M 0 112.9 M 0.951 PE 100 100 native 49.2 M 0.0 M 39.9 M 0.672 0.81 0.81 5.07 230 1.14 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/8887102b-f441-4a09-8d38-f384a3e2ff73/@@download/cross_correlation_plot/ENCFF831SWKENCFF738RCP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB963MXU michael-snyder:L-2242 "ENCFF831SWK,ENCFF738RCP" HiSeq 4000 2016-11-02T23:13:52.301587+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Gbg7Q0369G2j95P4QbpbpP ENCSR213HBY https://www.encodeproject.org/experiments/ENCSR213HBY RNA binding protein TOE1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF618GRR https://www.encodeproject.org/files/ENCFF618GRR/@@download/ENCFF618GRR.bam ENCFF076FAM https://www.encodeproject.org/files/ENCFF076FAM/@@download/ENCFF076FAM.bam 103.0 M 0 100.3 M 0.974 PE 100 100 native 43.8 M 0.0 M 27.2 M 0.529 0.62 0.63 2.77 220 1.10 2.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/65e39626-ba20-433d-9cdf-548f992917da/@@download/cross_correlation_plot/ENCFF640ZCMENCFF011GIB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB811RXM michael-snyder:L-2289 "ENCFF011GIB,ENCFF640ZCM" HiSeq 4000 2016-11-02T23:11:39.282770+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbgF80369F27BX7Gp08ybz ENCSR907MZR https://www.encodeproject.org/experiments/ENCSR907MZR transcription factor TRIM24-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF551IFV https://www.encodeproject.org/files/ENCFF551IFV/@@download/ENCFF551IFV.bam ENCFF545YDJ https://www.encodeproject.org/files/ENCFF545YDJ/@@download/ENCFF545YDJ.bam 69.8 M 0 66.7 M 0.956 PE 100 100 native 29.4 M 0.0 M 27.7 M 0.794 0.94 0.94 16.91 205 1.17 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/35ded8ea-7dcb-46e4-99ed-f7de964e26f4/@@download/cross_correlation_plot/ENCFF107WKNENCFF950QCU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB465YBO michael-snyder:L-2167 "ENCFF107WKN,ENCFF950QCU" HiSeq 2000 2016-10-09T17:13:38.835608+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41680jv1QxJBfj5Zb2pXz ENCSR907MZR https://www.encodeproject.org/experiments/ENCSR907MZR transcription factor TRIM24-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF923LMN https://www.encodeproject.org/files/ENCFF923LMN/@@download/ENCFF923LMN.bam ENCFF071CRE https://www.encodeproject.org/files/ENCFF071CRE/@@download/ENCFF071CRE.bam 59.0 M 0 56.0 M 0.951 PE 100 100 native 24.7 M 0.0 M 23.4 M 0.795 0.95 0.95 20.04 210 1.22 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d8e40a5-d2cf-48b1-b0c7-ab117e2a2c55/@@download/cross_correlation_plot/ENCFF334HNSENCFF300IMG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB447SXG michael-snyder:L-2168 "ENCFF300IMG,ENCFF334HNS" HiSeq 2000 2016-10-09T17:05:51.436454+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv417Q0jv1xPyfX78Yz4gjB ENCSR957LDM https://www.encodeproject.org/experiments/ENCSR957LDM transcription factor TRIM24-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF079SPF https://www.encodeproject.org/files/ENCFF079SPF/@@download/ENCFF079SPF.bam ENCFF733UEY https://www.encodeproject.org/files/ENCFF733UEY/@@download/ENCFF733UEY.bam 49.6 M 0 48.8 M 0.983 PE 100 100 native 21.5 M 0.0 M 19.9 M 0.803 0.93 0.93 13.46 200 1.16 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/044e1672-b6ba-4f22-8284-677c344be0cf/@@download/cross_correlation_plot/ENCFF112ZYYENCFF567LMF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB949IYC michael-snyder:L-2157 "ENCFF112ZYY,ENCFF567LMF" HiSeq 2000 2016-09-16T03:19:55.958104+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyf100369BP06Yb0qGVZFk ENCSR957LDM https://www.encodeproject.org/experiments/ENCSR957LDM transcription factor TRIM24-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF738QLQ https://www.encodeproject.org/files/ENCFF738QLQ/@@download/ENCFF738QLQ.bam ENCFF185COP https://www.encodeproject.org/files/ENCFF185COP/@@download/ENCFF185COP.bam 60.7 M 0 59.4 M 0.979 PE 100 100 native 26.0 M 0.0 M 24.2 M 0.798 0.93 0.93 14.60 190 1.15 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7ce45da-3893-4f8a-acbf-e72699b9500a/@@download/cross_correlation_plot/ENCFF983NMPENCFF150KRT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB887DPL michael-snyder:L-2158 "ENCFF150KRT,ENCFF983NMP" HiSeq 2000 2016-09-16T03:20:13.960133+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyf4j03696yyJ91JYf9pJx ENCSR213VUI https://www.encodeproject.org/experiments/ENCSR213VUI RNA binding protein TRIM25-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF541OEZ https://www.encodeproject.org/files/ENCFF541OEZ/@@download/ENCFF541OEZ.bam ENCFF054HRS https://www.encodeproject.org/files/ENCFF054HRS/@@download/ENCFF054HRS.bam 58.9 M 0 54.6 M 0.926 PE 100 100 native 23.6 M 0.0 M 21.4 M 0.725 0.91 0.91 10.49 215 1.07 4.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/88f644a9-6169-4af4-8e53-27b3ad5a10ac/@@download/cross_correlation_plot/ENCFF973JIIENCFF553CSZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB502JVC michael-snyder:L-2031 "ENCFF973JII,ENCFF553CSZ" HiSeq 2000 2016-10-09T17:36:31.872547+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv63680jv1YvGVzF100Zf7B ENCSR213VUI https://www.encodeproject.org/experiments/ENCSR213VUI RNA binding protein TRIM25-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF063VLB https://www.encodeproject.org/files/ENCFF063VLB/@@download/ENCFF063VLB.bam ENCFF575UDJ https://www.encodeproject.org/files/ENCFF575UDJ/@@download/ENCFF575UDJ.bam 69.1 M 0 64.4 M 0.931 PE 100 100 native 27.7 M 0.0 M 26.2 M 0.758 0.95 0.95 19.09 205 1.06 4.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/85cbb5d5-0d0d-4483-ac0e-848d46bff5a9/@@download/cross_correlation_plot/ENCFF133ABTENCFF082ZXS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB609TDY michael-snyder:L-2032 "ENCFF082ZXS,ENCFF133ABT" HiSeq 2000 2016-10-09T17:36:49.690011+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv638Q0jv1fXGPZpVVpjYQg ENCSR474CVP https://www.encodeproject.org/experiments/ENCSR474CVP transcription factor TRIM28-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR000EFW https://www.encodeproject.org/experiments/ENCSR000EFW transcription factor UBTF-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF708ISS https://www.encodeproject.org/files/ENCFF708ISS/@@download/ENCFF708ISS.bam ENCFF221HGL https://www.encodeproject.org/files/ENCFF221HGL/@@download/ENCFF221HGL.bam 28.2 M 0 27.0 M 0.959 SE 36 28 28 0.0 M 14.7 M 13.8 M 0.490 0.94 0.94 16.82 95 1.09 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/0b1bdc52-b8c9-4e6c-8f88-5b2f945da564/@@download/cross_correlation_plot/ENCFF000ZCI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ACI ENCFF000ZCI Illumina Genome Analyzer 2017-01-05T21:25:59.981168+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7pJ80369Kbx0VG4x7402J ENCSR000EFW https://www.encodeproject.org/experiments/ENCSR000EFW transcription factor UBTF-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF591IRP https://www.encodeproject.org/files/ENCFF591IRP/@@download/ENCFF591IRP.bam ENCFF559SVS https://www.encodeproject.org/files/ENCFF559SVS/@@download/ENCFF559SVS.bam 25.1 M 0 24.0 M 0.957 SE 36 28 28 0.0 M 12.0 M 11.4 M 0.455 0.95 0.95 20.89 105 1.06 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf1665f3-3156-483a-b285-a200113c6a1f/@@download/cross_correlation_plot/ENCFF000ZCK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATI ENCFF000ZCK Illumina Genome Analyzer 2017-01-05T21:25:49.949438+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7pY803699GG65G542pjZJ ENCSR000EFZ https://www.encodeproject.org/experiments/ENCSR000EFZ transcription factor UBTF-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF314KHY https://www.encodeproject.org/files/ENCFF314KHY/@@download/ENCFF314KHY.bam ENCFF552IGP https://www.encodeproject.org/files/ENCFF552IGP/@@download/ENCFF552IGP.bam 30.6 M 0 29.7 M 0.972 SE 36 28 28 0.0 M 14.2 M 13.6 M 0.446 0.96 0.96 25.50 95 1.15 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/cfeefe5f-ab1e-4a8e-8756-95e9c039d14d/@@download/cross_correlation_plot/ENCFF000ZCR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADF ENCFF000ZCR Illumina Genome Analyzer 2017-01-05T21:21:12.514122+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7v8003697J9fxG4f90kb5 ENCSR000EFZ https://www.encodeproject.org/experiments/ENCSR000EFZ transcription factor UBTF-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF012LYY https://www.encodeproject.org/files/ENCFF012LYY/@@download/ENCFF012LYY.bam ENCFF461FMW https://www.encodeproject.org/files/ENCFF461FMW/@@download/ENCFF461FMW.bam 25.5 M 0 24.7 M 0.968 SE 36 28 28 0.0 M 10.8 M 10.3 M 0.405 0.96 0.96 22.72 95 1.25 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a917b4a-7076-4ca4-a710-7358cef45486/@@download/cross_correlation_plot/ENCFF000ZCT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AJG ENCFF000ZCT Illumina Genome Analyzer 2017-01-05T21:21:04.011410+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7vJj0369Kbx0VG4x7403V ENCSR000EHG https://www.encodeproject.org/experiments/ENCSR000EHG transcription factor USF2-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF434RFX https://www.encodeproject.org/files/ENCFF434RFX/@@download/ENCFF434RFX.bam ENCFF241NUY https://www.encodeproject.org/files/ENCFF241NUY/@@download/ENCFF241NUY.bam 25.5 M 0 21.3 M 0.836 SE 36 36 native 0.0 M 15.3 M 15.2 M 0.596 0.99 0.99 99.10 110 1.04 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/acd9b064-d8a2-4d32-a0db-dd900fd3086d/@@download/cross_correlation_plot/ENCFF000ZDJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AIX ENCFF000ZDJ Illumina Genome Analyzer 2016-12-10T21:30:22.499987+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16377j036969X0jJ6p3ffZ4 ENCSR000EHG https://www.encodeproject.org/experiments/ENCSR000EHG transcription factor USF2-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF420ZVF https://www.encodeproject.org/files/ENCFF420ZVF/@@download/ENCFF420ZVF.bam ENCFF424FKD https://www.encodeproject.org/files/ENCFF424FKD/@@download/ENCFF424FKD.bam 24.2 M 0 21.0 M 0.869 SE 36 36 native 0.0 M 15.2 M 15.0 M 0.620 0.99 0.99 86.77 110 1.06 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/9dfe05f3-5ea0-47f1-b1b2-39b061f112e6/@@download/cross_correlation_plot/ENCFF000ZDK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABI ENCFF000ZDK Illumina Genome Analyzer 2016-12-10T21:28:20.419157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1637GQ036933PVVJ7Qq01Bp ENCSR107RHZ https://www.encodeproject.org/experiments/ENCSR107RHZ "RNA binding protein,transcription factor" YBX1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF195WOK https://www.encodeproject.org/files/ENCFF195WOK/@@download/ENCFF195WOK.bam ENCFF473THN https://www.encodeproject.org/files/ENCFF473THN/@@download/ENCFF473THN.bam 64.2 M 0 60.6 M 0.944 PE 100 100 native 25.2 M 0.0 M 22.2 M 0.691 0.88 0.88 8.03 170 1.09 4.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/73d24c16-8151-4199-852d-1ae0b9c145a0/@@download/cross_correlation_plot/ENCFF011GGXENCFF183DJQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB651CYS michael-snyder:L-157 "ENCFF183DJQ,ENCFF011GGX" HiSeq 2000 2016-10-09T17:09:37.780965+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69GQ0jv1QkfFX8V1vJbGx ENCSR107RHZ https://www.encodeproject.org/experiments/ENCSR107RHZ "RNA binding protein,transcription factor" YBX1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF715AMR https://www.encodeproject.org/files/ENCFF715AMR/@@download/ENCFF715AMR.bam ENCFF502QIV https://www.encodeproject.org/files/ENCFF502QIV/@@download/ENCFF502QIV.bam 59.4 M 0 57.5 M 0.968 PE 100 100 native 25.0 M 0.0 M 22.9 M 0.770 0.92 0.91 11.56 190 1.08 4.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1827c50-4924-475d-b5a5-3d20c5a99368/@@download/cross_correlation_plot/ENCFF909OVDENCFF079PYC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB344DXR michael-snyder:L-170 "ENCFF909OVD,ENCFF079PYC" HiSeq 2000 2016-10-09T17:09:21.101746+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69KQ0jv1QZp37BGvK2BPp ENCSR567JEU https://www.encodeproject.org/experiments/ENCSR567JEU "RNA binding protein,transcription factor" YBX3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF954HWS https://www.encodeproject.org/files/ENCFF954HWS/@@download/ENCFF954HWS.bam ENCFF887DZF https://www.encodeproject.org/files/ENCFF887DZF/@@download/ENCFF887DZF.bam 60.4 M 0 58.8 M 0.973 PE 100 100 native 25.9 M 0.0 M 23.4 M 0.777 0.91 0.90 10.24 210 1.06 5.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/cad829e2-fcb8-4898-b4a7-e952642d6c9c/@@download/cross_correlation_plot/ENCFF276AYDENCFF519SRC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB315RYQ michael-snyder:L-1824 "ENCFF519SRC,ENCFF276AYD" HiSeq 2000 2016-10-09T17:13:57.985904+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv407Q0jv1g5yGjfvVx0Kvz ENCSR567JEU https://www.encodeproject.org/experiments/ENCSR567JEU "RNA binding protein,transcription factor" YBX3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF124RUL https://www.encodeproject.org/files/ENCFF124RUL/@@download/ENCFF124RUL.bam ENCFF416CRZ https://www.encodeproject.org/files/ENCFF416CRZ/@@download/ENCFF416CRZ.bam 64.8 M 0 63.7 M 0.984 PE 100 100 native 28.2 M 0.0 M 27.4 M 0.846 0.97 0.97 36.93 200 1.06 4.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/fde67dad-f992-4369-8e8b-abef8135cfd7/@@download/cross_correlation_plot/ENCFF590TAHENCFF504AIH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB538QJH michael-snyder:L-1825 "ENCFF504AIH,ENCFF590TAH" HiSeq 2000 2016-10-09T17:14:17.428953+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40980jv1g5yGjfvVx0Kx7 ENCSR230PTV https://www.encodeproject.org/experiments/ENCSR230PTV transcription factor ZBTB2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF273NVY https://www.encodeproject.org/files/ENCFF273NVY/@@download/ENCFF273NVY.bam ENCFF793MDW https://www.encodeproject.org/files/ENCFF793MDW/@@download/ENCFF793MDW.bam 48.5 M 0 47.9 M 0.989 PE 100 100 native 21.4 M 0.0 M 20.5 M 0.846 0.96 0.96 24.44 210 1.13 2.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/987a68e9-d7a6-43ca-ab4e-e6b481dc7c78/@@download/cross_correlation_plot/ENCFF223BRRENCFF839NSQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB585GFN michael-snyder:L-2151 "ENCFF839NSQ,ENCFF223BRR" HiSeq 2000 2016-10-09T17:13:53.894341+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kG00jv1zBYbxYJ5zzyyg ENCSR230PTV https://www.encodeproject.org/experiments/ENCSR230PTV transcription factor ZBTB2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF555QMG https://www.encodeproject.org/files/ENCFF555QMG/@@download/ENCFF555QMG.bam ENCFF273SUG https://www.encodeproject.org/files/ENCFF273SUG/@@download/ENCFF273SUG.bam 61.4 M 0 60.5 M 0.987 PE 100 100 native 26.7 M 0.0 M 25.7 M 0.837 0.96 0.96 25.81 210 1.10 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd38b632-ff5e-49d0-8fbc-406df57bd07e/@@download/cross_correlation_plot/ENCFF796XXQENCFF920GKJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB314ILV michael-snyder:L-2152 "ENCFF920GKJ,ENCFF796XXQ" HiSeq 2000 2016-10-09T17:13:10.745804+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3kJQ0jv1xPyfX78Yz4gQf ENCSR876GXA https://www.encodeproject.org/experiments/ENCSR876GXA transcription factor ZBTB33-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF226IAA https://www.encodeproject.org/files/ENCFF226IAA/@@download/ENCFF226IAA.bam ENCFF775SSR https://www.encodeproject.org/files/ENCFF775SSR/@@download/ENCFF775SSR.bam 51.8 M 0 50.7 M 0.980 PE 100 100 native 22.1 M 0.0 M 20.5 M 0.791 0.93 0.93 13.92 215 1.22 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/f612ba30-baf4-4934-9cb7-f3cda4b0ecd3/@@download/cross_correlation_plot/ENCFF332XKOENCFF189UUN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB005VWE michael-snyder:L-1764 "ENCFF189UUN,ENCFF332XKO" HiSeq 2000 2016-10-09T17:08:30.079591+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69k80jv1Y68V4KG8yz395 ENCSR876GXA https://www.encodeproject.org/experiments/ENCSR876GXA transcription factor ZBTB33-human K562 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF632WSK https://www.encodeproject.org/files/ENCFF632WSK/@@download/ENCFF632WSK.bam ENCFF073OVL https://www.encodeproject.org/files/ENCFF073OVL/@@download/ENCFF073OVL.bam 43.5 M 0 42.5 M 0.978 PE 100 100 native 18.1 M 0.0 M 17.6 M 0.808 0.97 0.97 38.79 225 1.35 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/797f0137-e6e2-4367-940d-acf2259139f9/@@download/cross_correlation_plot/ENCFF094FKHENCFF968SHS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB699RIE michael-snyder:L-1765 "ENCFF968SHS,ENCFF094FKH" HiSeq 2000 2016-10-09T17:07:42.014994+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv69qQ0jv1bJQB62j8VV6Pq ENCSR237VLT https://www.encodeproject.org/experiments/ENCSR237VLT transcription factor ZBTB40-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF873BRB https://www.encodeproject.org/files/ENCFF873BRB/@@download/ENCFF873BRB.bam ENCFF789ZEC https://www.encodeproject.org/files/ENCFF789ZEC/@@download/ENCFF789ZEC.bam 50.3 M 0 49.7 M 0.988 PE 100 100 native 22.1 M 0.0 M 21.2 M 0.841 0.96 0.96 23.35 230 2.08 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/1257b88e-aab5-4cd9-b3fa-3401e93e839b/@@download/cross_correlation_plot/ENCFF673KNXENCFF297TMP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB215DSK michael-snyder:L-264 "ENCFF673KNX,ENCFF297TMP" HiSeq 2000 2016-10-09T17:02:26.769663+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4G5Q0jv1xPyfX78Yz4j6f ENCSR237VLT https://www.encodeproject.org/experiments/ENCSR237VLT transcription factor ZBTB40-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF149LTH https://www.encodeproject.org/files/ENCFF149LTH/@@download/ENCFF149LTH.bam ENCFF775MLD https://www.encodeproject.org/files/ENCFF775MLD/@@download/ENCFF775MLD.bam 68.2 M 0 66.9 M 0.981 PE 100 100 native 28.8 M 0.0 M 26.7 M 0.783 0.93 0.93 13.67 200 1.73 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1e9aea7-dd2f-47d3-917d-7f8f4b4bfaac/@@download/cross_correlation_plot/ENCFF520UHFENCFF687MII.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB908SMN michael-snyder:L-265 "ENCFF520UHF,ENCFF687MII" HiSeq 2000 2016-10-09T17:04:21.227501+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4G700jv1QxJBfj5Zb2pyf ENCSR786OQY https://www.encodeproject.org/experiments/ENCSR786OQY transcription factor ZBTB5-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF872TUO https://www.encodeproject.org/files/ENCFF872TUO/@@download/ENCFF872TUO.bam ENCFF248KAG https://www.encodeproject.org/files/ENCFF248KAG/@@download/ENCFF248KAG.bam 64.4 M 0 61.4 M 0.953 PE 100 100 native 25.8 M 0.0 M 23.4 M 0.728 0.91 0.91 10.61 200 1.08 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/b041bd8f-43af-4ec0-9273-48e7415d1b1c/@@download/cross_correlation_plot/ENCFF865YPRENCFF543AIK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB902XHD michael-snyder:L-2234 "ENCFF543AIK,ENCFF865YPR" HiSeq 2000 2016-10-09T17:06:38.373111+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6K600jv1g5yGjfvVx0PVb ENCSR786OQY https://www.encodeproject.org/experiments/ENCSR786OQY transcription factor ZBTB5-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF329MCT https://www.encodeproject.org/files/ENCFF329MCT/@@download/ENCFF329MCT.bam ENCFF934QDZ https://www.encodeproject.org/files/ENCFF934QDZ/@@download/ENCFF934QDZ.bam 53.4 M 0 52.3 M 0.979 PE 100 100 native 23.0 M 0.0 M 22.6 M 0.846 0.99 0.99 67.29 200 1.09 2.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/4eb1d148-817f-443d-a322-bd57b2863478/@@download/cross_correlation_plot/ENCFF730YIKENCFF861REO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB567SCE michael-snyder:L-2281 "ENCFF861REO,ENCFF730YIK" HiSeq 2000 2016-10-09T17:05:51.389373+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6K800jv1f60PxyZ9JGPgb ENCSR000EFR https://www.encodeproject.org/experiments/ENCSR000EFR "RNA binding protein,transcription factor" ZC3H11A-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF718SZZ https://www.encodeproject.org/files/ENCFF718SZZ/@@download/ENCFF718SZZ.bam ENCFF235TXF https://www.encodeproject.org/files/ENCFF235TXF/@@download/ENCFF235TXF.bam 31.2 M 0 30.5 M 0.977 SE 36 36 native 0.0 M 23.2 M 22.1 M 0.708 0.95 0.95 21.90 100 1.02 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/9398705e-2081-4dce-99bc-69bc794575d3/@@download/cross_correlation_plot/ENCFF000ZDS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKV ENCFF000ZDS Illumina Genome Analyzer 2016-12-11T04:06:21.018864+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1652200369KbxV61z4GFvVj ENCSR000EFR https://www.encodeproject.org/experiments/ENCSR000EFR "RNA binding protein,transcription factor" ZC3H11A-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF161ZFC https://www.encodeproject.org/files/ENCFF161ZFC/@@download/ENCFF161ZFC.bam ENCFF537UFC https://www.encodeproject.org/files/ENCFF537UFC/@@download/ENCFF537UFC.bam 24.9 M 0 23.6 M 0.950 SE 36 36 native 0.0 M 18.1 M 17.4 M 0.700 0.97 0.97 28.77 95 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/d11c8e09-add3-458c-a8b8-14f3b8508331/@@download/cross_correlation_plot/ENCFF000ZDU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKW ENCFF000ZDU Illumina Genome Analyzer 2016-12-11T04:02:00.730956+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16526j03697yz601ypVJ3Xv ENCSR143CEO https://www.encodeproject.org/experiments/ENCSR143CEO RNA binding protein ZC3H8-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF009UWA https://www.encodeproject.org/files/ENCFF009UWA/@@download/ENCFF009UWA.bam ENCFF706VFX https://www.encodeproject.org/files/ENCFF706VFX/@@download/ENCFF706VFX.bam 51.0 M 0 50.2 M 0.984 PE 100 100 native 22.2 M 0.0 M 20.0 M 0.785 0.90 0.90 10.11 195 1.10 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f90b1a4-3d74-4bbb-979d-1b86847cbce0/@@download/cross_correlation_plot/ENCFF031OAXENCFF901OGE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB393QPV michael-snyder:L-2159 "ENCFF901OGE,ENCFF031OAX" HiSeq 2000 2016-10-09T17:05:20.389371+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47PQ0jv1XYYX2Fxk3f55x ENCSR143CEO https://www.encodeproject.org/experiments/ENCSR143CEO RNA binding protein ZC3H8-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF766PNT https://www.encodeproject.org/files/ENCFF766PNT/@@download/ENCFF766PNT.bam ENCFF564IZS https://www.encodeproject.org/files/ENCFF564IZS/@@download/ENCFF564IZS.bam 54.6 M 0 53.7 M 0.983 PE 100 100 native 23.7 M 0.0 M 21.9 M 0.804 0.93 0.92 13.21 190 1.09 3.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/82623cf6-fdcc-4c91-8e65-1333b7c6c42f/@@download/cross_correlation_plot/ENCFF832AWUENCFF354CCL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB049SKA michael-snyder:L-2160 "ENCFF354CCL,ENCFF832AWU" HiSeq 2000 2016-10-09T17:06:32.113454+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47V00jv1f60PxyZ9JGP71 ENCSR494PWZ https://www.encodeproject.org/experiments/ENCSR494PWZ RNA binding protein ZC3H8-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF049FZG https://www.encodeproject.org/files/ENCFF049FZG/@@download/ENCFF049FZG.bam ENCFF538UVG https://www.encodeproject.org/files/ENCFF538UVG/@@download/ENCFF538UVG.bam 63.0 M 0 60.6 M 0.962 PE 100 100 native 26.5 M 0.0 M 25.3 M 0.804 0.96 0.96 24.03 210 1.08 2.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/10755683-29cd-4e2d-91b5-43b20c8498e0/@@download/cross_correlation_plot/ENCFF172ORXENCFF721BBC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB085EWN michael-snyder:L-2161 "ENCFF721BBC,ENCFF172ORX" HiSeq 2000 2016-10-09T17:14:10.789197+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gX00jv1f60PxyZ9JGKk3 ENCSR494PWZ https://www.encodeproject.org/experiments/ENCSR494PWZ RNA binding protein ZC3H8-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF667WHX https://www.encodeproject.org/files/ENCFF667WHX/@@download/ENCFF667WHX.bam ENCFF809BAB https://www.encodeproject.org/files/ENCFF809BAB/@@download/ENCFF809BAB.bam 61.1 M 0 58.5 M 0.958 PE 100 100 native 25.7 M 0.0 M 24.0 M 0.786 0.94 0.94 15.43 200 1.11 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/946337f4-9431-4713-b2f3-544ebd42df1a/@@download/cross_correlation_plot/ENCFF769QGVENCFF243CTR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB705OSO michael-snyder:L-2162 "ENCFF769QGV,ENCFF243CTR" HiSeq 2000 2016-10-09T17:13:32.356544+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3gYQ0jv1xPyfX78Yz4gPF ENCSR004GKA https://www.encodeproject.org/experiments/ENCSR004GKA transcription factor ZEB2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF035CJB https://www.encodeproject.org/files/ENCFF035CJB/@@download/ENCFF035CJB.bam ENCFF761RWD https://www.encodeproject.org/files/ENCFF761RWD/@@download/ENCFF761RWD.bam 49.0 M 0 48.3 M 0.984 PE 100 100 native 21.4 M 0.0 M 18.8 M 0.766 0.88 0.88 8.07 210 1.19 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/7fc25a84-fd4a-4363-b32a-70fc33d3dd12/@@download/cross_correlation_plot/ENCFF239XFDENCFF843QOR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB334VFQ michael-snyder:L-235 "ENCFF239XFD,ENCFF843QOR" HiSeq 2000 2016-10-09T17:40:33.371757+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kV80jv1jG2Qk7JXpxvXQ ENCSR004GKA https://www.encodeproject.org/experiments/ENCSR004GKA transcription factor ZEB2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF754GYS https://www.encodeproject.org/files/ENCFF754GYS/@@download/ENCFF754GYS.bam ENCFF003SPM https://www.encodeproject.org/files/ENCFF003SPM/@@download/ENCFF003SPM.bam 60.9 M 0 59.8 M 0.981 PE 100 100 native 26.2 M 0.0 M 23.4 M 0.769 0.89 0.89 9.23 200 1.13 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/577080ad-6836-48e3-bc6c-a71c6a06c660/@@download/cross_correlation_plot/ENCFF030EJQENCFF845NVE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB687SDX michael-snyder:L-237 "ENCFF845NVE,ENCFF030EJQ" HiSeq 2000 2016-10-09T17:38:16.495439+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kYQ0jv1fXGPZpVVpjYKf ENCSR322CFO https://www.encodeproject.org/experiments/ENCSR322CFO transcription factor ZEB2-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF500YYZ https://www.encodeproject.org/files/ENCFF500YYZ/@@download/ENCFF500YYZ.bam ENCFF682MBJ https://www.encodeproject.org/files/ENCFF682MBJ/@@download/ENCFF682MBJ.bam 55.7 M 0 54.8 M 0.985 PE 100 100 native 24.2 M 0.0 M 22.1 M 0.795 0.93 0.93 14.86 210 1.12 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ec90a00-5b01-47e7-9f8f-cf3ae6f5af72/@@download/cross_correlation_plot/ENCFF845FIVENCFF349FIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB572FFJ michael-snyder:L-236 "ENCFF349FIQ,ENCFF845FIV" HiSeq 2000 2016-10-09T17:13:22.123800+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qb00jv1vY92b0GYjVFYb ENCSR322CFO https://www.encodeproject.org/experiments/ENCSR322CFO transcription factor ZEB2-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF717OYW https://www.encodeproject.org/files/ENCFF717OYW/@@download/ENCFF717OYW.bam ENCFF924RVG https://www.encodeproject.org/files/ENCFF924RVG/@@download/ENCFF924RVG.bam 66.5 M 0 65.3 M 0.983 PE 100 100 native 28.4 M 0.0 M 25.4 M 0.765 0.91 0.91 10.87 200 1.13 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a171781-c97e-4455-9b05-7b20e61c5f54/@@download/cross_correlation_plot/ENCFF776VECENCFF824ADC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB962QOX michael-snyder:L-238 "ENCFF776VEC,ENCFF824ADC" HiSeq 2000 2016-10-09T17:14:40.986552+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qfj0jv1XvFGkBjjfjQ12 ENCSR557RVF https://www.encodeproject.org/experiments/ENCSR557RVF transcription factor ZHX1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF723QZO https://www.encodeproject.org/files/ENCFF723QZO/@@download/ENCFF723QZO.bam ENCFF373KYE https://www.encodeproject.org/files/ENCFF373KYE/@@download/ENCFF373KYE.bam 29.8 M 0 27.1 M 0.910 SE 36 36 native 0.0 M 20.5 M 19.6 M 0.657 0.96 0.96 22.17 110 1.03 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/51a018ed-cb5a-4a6c-b66b-9ae81d290b00/@@download/cross_correlation_plot/ENCFF002EES.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB028HUL michael-snyder:ZHX1_NB600-244A_K562_Rep1 ENCFF002EES Illumina Genome Analyzer IIx 2016-10-09T17:09:39.867600+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3x780jv1g5yGjfvVx0Kky ENCSR557RVF https://www.encodeproject.org/experiments/ENCSR557RVF transcription factor ZHX1-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF019PLG https://www.encodeproject.org/files/ENCFF019PLG/@@download/ENCFF019PLG.bam ENCFF573IUA https://www.encodeproject.org/files/ENCFF573IUA/@@download/ENCFF573IUA.bam 32.3 M 0 31.7 M 0.981 SE 36 36 native 0.0 M 24.3 M 23.4 M 0.723 0.96 0.96 27.72 95 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/07b0e1b7-0f15-4ef9-9dff-dbf3e5c4af77/@@download/cross_correlation_plot/ENCFF002EET.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB288VUN michael-snyder:ZHX1_NB600-244A_K562_Rep3 ENCFF002EET Illumina Genome Analyzer IIx 2016-10-09T17:09:47.505730+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3x8j0jv1xPyfX78Yz4gZp ENCSR882ERE https://www.encodeproject.org/experiments/ENCSR882ERE transcription factor ZKSCAN1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF071KOM https://www.encodeproject.org/files/ENCFF071KOM/@@download/ENCFF071KOM.bam ENCFF752RHL https://www.encodeproject.org/files/ENCFF752RHL/@@download/ENCFF752RHL.bam 24.1 M 0 23.7 M 0.981 SE 36 36 native 0.0 M 18.1 M 17.5 M 0.725 0.97 0.97 37.02 110 1.12 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/6a21f2f7-18ab-4b8d-bd5b-eadc1a8c3c32/@@download/cross_correlation_plot/ENCFF002EWL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB149OES michael-snyder:ZKSCAN1_HPA006672_K562_Rep1 ENCFF002EWL Illumina Genome Analyzer IIx 2016-10-09T17:00:43.766008+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv42580jv1XvFGkBjjfjQ7x ENCSR882ERE https://www.encodeproject.org/experiments/ENCSR882ERE transcription factor ZKSCAN1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF236ZUN https://www.encodeproject.org/files/ENCFF236ZUN/@@download/ENCFF236ZUN.bam ENCFF359UJQ https://www.encodeproject.org/files/ENCFF359UJQ/@@download/ENCFF359UJQ.bam 23.8 M 0 22.8 M 0.957 SE 36 36 native 0.0 M 16.9 M 16.3 M 0.683 0.96 0.96 26.68 105 1.10 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e6bf660-dbe0-4e51-a2a9-ba1f87d2e760/@@download/cross_correlation_plot/ENCFF002EWQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB149FYM michael-snyder:ZKSCAN1_HPA006672_K562_Rep2 ENCFF002EWQ Illumina Genome Analyzer IIx 2016-10-09T17:00:58.144176+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv426j0jv1vY92b0GYjVFp5 ENCSR000EFQ https://www.encodeproject.org/experiments/ENCSR000EFQ transcription factor ZMIZ1-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF682RUI https://www.encodeproject.org/files/ENCFF682RUI/@@download/ENCFF682RUI.bam ENCFF308ELT https://www.encodeproject.org/files/ENCFF308ELT/@@download/ENCFF308ELT.bam 31.6 M 0 30.8 M 0.975 SE 36 36 native 0.0 M 23.4 M 22.3 M 0.705 0.95 0.95 21.89 110 1.06 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/aad6a742-8af5-4c3f-bacb-8aef92b1ee5b/@@download/cross_correlation_plot/ENCFF000ZFJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGG ENCFF000ZFJ Illumina Genome Analyzer 2016-12-11T04:45:03.052793+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165pj00369Bxb30J6x5bZPG ENCSR000EFQ https://www.encodeproject.org/experiments/ENCSR000EFQ transcription factor ZMIZ1-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF991RVH https://www.encodeproject.org/files/ENCFF991RVH/@@download/ENCFF991RVH.bam ENCFF025VHS https://www.encodeproject.org/files/ENCFF025VHS/@@download/ENCFF025VHS.bam 23.6 M 0 22.6 M 0.957 SE 36 36 native 0.0 M 17.2 M 16.5 M 0.701 0.96 0.96 27.37 105 1.08 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7bee6ca-41d1-4216-8d4d-b004dc371f2a/@@download/cross_correlation_plot/ENCFF000ZFM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ARU ENCFF000ZFM Illumina Genome Analyzer 2016-12-11T04:38:12.053794+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165px00369BJyPz9fb9qYK7 ENCSR907JPB https://www.encodeproject.org/experiments/ENCSR907JPB transcription factor ZMIZ1-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF417HNM https://www.encodeproject.org/files/ENCFF417HNM/@@download/ENCFF417HNM.bam ENCFF844AWP https://www.encodeproject.org/files/ENCFF844AWP/@@download/ENCFF844AWP.bam 25.3 M 0 23.6 M 0.933 SE 36 36 native 0.0 M 18.3 M 14.5 M 0.573 0.80 0.79 4.51 70 1.09 2.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/19b3f019-23ea-4d09-9354-df2dedc1cfd5/@@download/cross_correlation_plot/ENCFF002EWF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB392IDM michael-snyder:MIZ1_sc-136985_K562_Rep1 ENCFF002EWF Illumina Genome Analyzer IIx 2016-10-09T16:59:20.657444+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4FVQ0jv1zBYbxYJ5zzzKZ ENCSR907JPB https://www.encodeproject.org/experiments/ENCSR907JPB transcription factor ZMIZ1-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF384WCY https://www.encodeproject.org/files/ENCFF384WCY/@@download/ENCFF384WCY.bam ENCFF577XSW https://www.encodeproject.org/files/ENCFF577XSW/@@download/ENCFF577XSW.bam 30.2 M 0 29.2 M 0.969 SE 36 36 native 0.0 M 22.3 M 19.6 M 0.651 0.88 0.88 8.10 110 1.05 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/325b546f-83d2-499a-8eca-8dbc9d3f64a3/@@download/cross_correlation_plot/ENCFF002EWG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB323UAT michael-snyder:MIZ1_sc-136985_K562_Rep2 ENCFF002EWG Illumina Genome Analyzer IIx 2016-10-09T16:59:28.033921+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4FXj0jv1XYYX2Fxk3f5BX ENCSR000EGP https://www.encodeproject.org/experiments/ENCSR000EGP transcription factor ZNF143-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF975ZXB https://www.encodeproject.org/files/ENCFF975ZXB/@@download/ENCFF975ZXB.bam ENCFF107KAO https://www.encodeproject.org/files/ENCFF107KAO/@@download/ENCFF107KAO.bam 35.6 M 0 34.9 M 0.980 SE 36 36 native 0.0 M 26.8 M 25.2 M 0.707 0.94 0.96 33.36 110 1.21 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/d695e659-2922-4d56-9ede-f25a9a82d7df/@@download/cross_correlation_plot/ENCFF000ZEA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQS ENCFF000ZEA Illumina Genome Analyzer 2016-12-11T03:41:08.087471+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164YY803696z7JqGk4Yzy7f ENCSR000EGP https://www.encodeproject.org/experiments/ENCSR000EGP transcription factor ZNF143-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF682XGC https://www.encodeproject.org/files/ENCFF682XGC/@@download/ENCFF682XGC.bam ENCFF519ADB https://www.encodeproject.org/files/ENCFF519ADB/@@download/ENCFF519ADB.bam 27.0 M 0 25.9 M 0.959 SE 36 36 native 0.0 M 19.9 M 18.6 M 0.690 0.94 0.96 28.63 110 1.37 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/93a49848-1cf7-4e89-a2d4-c6ca66135cae/@@download/cross_correlation_plot/ENCFF000ZEC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQT ENCFF000ZEC Illumina Genome Analyzer 2016-12-11T03:30:13.570200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Ygj03699K237J9jY9kx1 ENCSR546IHU https://www.encodeproject.org/experiments/ENCSR546IHU transcription factor ZNF184-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF068UWU https://www.encodeproject.org/files/ENCFF068UWU/@@download/ENCFF068UWU.bam ENCFF354TFR https://www.encodeproject.org/files/ENCFF354TFR/@@download/ENCFF354TFR.bam 74.6 M 0 67.3 M 0.902 PE 100 100 native 28.7 M 0.0 M 27.5 M 0.736 0.96 0.96 23.13 200 1.07 4.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/a578c098-0c47-4bef-ae11-d484158b0f95/@@download/cross_correlation_plot/ENCFF880UNPENCFF264CHQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB801CGH michael-snyder:L-2227 "ENCFF880UNP,ENCFF264CHQ" HiSeq 2000 2016-10-09T17:10:02.530629+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43980jv1XYYX2Fxk3f50B ENCSR546IHU https://www.encodeproject.org/experiments/ENCSR546IHU transcription factor ZNF184-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF648LXV https://www.encodeproject.org/files/ENCFF648LXV/@@download/ENCFF648LXV.bam ENCFF078FTA https://www.encodeproject.org/files/ENCFF078FTA/@@download/ENCFF078FTA.bam 68.3 M 0 61.2 M 0.896 PE 100 100 native 26.1 M 0.0 M 24.8 M 0.725 0.95 0.95 19.72 210 1.09 3.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/60554f97-f806-431f-bea4-3cb9e11ea469/@@download/cross_correlation_plot/ENCFF118URYENCFF082KHS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB252ESN michael-snyder:L-2228 "ENCFF082KHS,ENCFF118URY" HiSeq 2000 2016-10-09T17:05:12.190037+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43F00jv1xPyfX78Yz4gkx ENCSR099NCH https://www.encodeproject.org/experiments/ENCSR099NCH transcription factor ZNF24-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF109OWW https://www.encodeproject.org/files/ENCFF109OWW/@@download/ENCFF109OWW.bam ENCFF619PYG https://www.encodeproject.org/files/ENCFF619PYG/@@download/ENCFF619PYG.bam 52.4 M 0 51.2 M 0.977 PE 100 100 native 22.6 M 0.0 M 21.4 M 0.818 0.95 0.95 19.12 225 1.20 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/33627266-f03c-4f99-9ea9-4720863ec547/@@download/cross_correlation_plot/ENCFF711HKZENCFF715IBV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB972VJM michael-snyder:L-1855 "ENCFF715IBV,ENCFF711HKZ" HiSeq 2000 2016-10-09T17:12:37.883661+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40XQ0jv1zBYbxYJ5zzz51 ENCSR099NCH https://www.encodeproject.org/experiments/ENCSR099NCH transcription factor ZNF24-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF205VDU https://www.encodeproject.org/files/ENCFF205VDU/@@download/ENCFF205VDU.bam ENCFF031NVM https://www.encodeproject.org/files/ENCFF031NVM/@@download/ENCFF031NVM.bam 38.8 M 0 38.0 M 0.980 PE 100 100 native 16.8 M 0.0 M 16.4 M 0.844 0.98 0.98 41.18 295 1.25 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c59f7b3-2295-418f-a0ea-813d57e63ff4/@@download/cross_correlation_plot/ENCFF890KLFENCFF645HBN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB081XLD michael-snyder:L-1856 "ENCFF890KLF,ENCFF645HBN" HiSeq 2000 2016-10-09T17:12:34.686852+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40Z80jv1vY92b0GYjVFjP ENCSR385AHH https://www.encodeproject.org/experiments/ENCSR385AHH transcription factor ZNF24-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF786MHJ https://www.encodeproject.org/files/ENCFF786MHJ/@@download/ENCFF786MHJ.bam ENCFF593RXC https://www.encodeproject.org/files/ENCFF593RXC/@@download/ENCFF593RXC.bam 88.7 M 0 87.8 M 0.989 PE 100 100 native 39.3 M 0.0 M 38.3 M 0.863 0.98 0.98 39.96 175 1.11 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/107a9cde-fb4d-437a-a59a-86c7a34fadb5/@@download/cross_correlation_plot/ENCFF931UCZENCFF965QBT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB212UPD michael-snyder:L-105 "ENCFF931UCZ,ENCFF965QBT" HiSeq 2000 2016-10-09T17:17:53.642493+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3y6Q0jv1XYYX2Fxk3f4p9 ENCSR385AHH https://www.encodeproject.org/experiments/ENCSR385AHH transcription factor ZNF24-human K562 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF686ZIH https://www.encodeproject.org/files/ENCFF686ZIH/@@download/ENCFF686ZIH.bam ENCFF707ZKL https://www.encodeproject.org/files/ENCFF707ZKL/@@download/ENCFF707ZKL.bam 81.7 M 0 80.0 M 0.979 PE 100 100 native 35.4 M 0.0 M 33.1 M 0.810 0.94 0.94 17.01 180 1.12 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/121b4514-5e39-4190-aaab-d603aa2360d6/@@download/cross_correlation_plot/ENCFF546WQOENCFF294CYY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB778WXY michael-snyder:L-145 "ENCFF546WQO,ENCFF294CYY" HiSeq 2000 2016-10-09T17:17:37.670000+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3y800jv1f60PxyZ9JGKzY ENCSR695EQB https://www.encodeproject.org/experiments/ENCSR695EQB transcription factor ZNF24-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF657TZQ https://www.encodeproject.org/files/ENCFF657TZQ/@@download/ENCFF657TZQ.bam ENCFF953ORJ https://www.encodeproject.org/files/ENCFF953ORJ/@@download/ENCFF953ORJ.bam 75.7 M 0 73.7 M 0.974 PE 100 100 native 31.9 M 0.0 M 30.4 M 0.802 0.95 0.95 20.82 195 1.23 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/20475001-e701-4b0d-a229-e5db3d6cb0b9/@@download/cross_correlation_plot/ENCFF241YMFENCFF941CCE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB385HNK michael-snyder:L-1758 "ENCFF941CCE,ENCFF241YMF" HiSeq 2000 2016-10-09T17:06:33.099230+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48BQ0jv1XYYX2Fxk3f578 ENCSR695EQB https://www.encodeproject.org/experiments/ENCSR695EQB transcription factor ZNF24-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF738AVH https://www.encodeproject.org/files/ENCFF738AVH/@@download/ENCFF738AVH.bam ENCFF998BKX https://www.encodeproject.org/files/ENCFF998BKX/@@download/ENCFF998BKX.bam 74.2 M 0 72.7 M 0.980 PE 100 100 native 31.8 M 0.0 M 30.4 M 0.820 0.96 0.96 23.45 200 1.26 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/9df4a602-511b-4e72-9101-54b7d57e1e3c/@@download/cross_correlation_plot/ENCFF292TZEENCFF710ZBC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB952HQO michael-snyder:L-1759 "ENCFF292TZE,ENCFF710ZBC" HiSeq 2000 2016-10-09T17:07:09.128607+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48G00jv1g5yGjfvVx0P2Z ENCSR167KBO https://www.encodeproject.org/experiments/ENCSR167KBO transcription factor ZNF316-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF267EEY https://www.encodeproject.org/files/ENCFF267EEY/@@download/ENCFF267EEY.bam ENCFF325LLQ https://www.encodeproject.org/files/ENCFF325LLQ/@@download/ENCFF325LLQ.bam 84.3 M 0 78.1 M 0.927 PE 100 100 native 34.1 M 0.0 M 33.2 M 0.787 0.99 0.99 67.93 210 1.52 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/670ba8d3-fdd9-4866-bd65-a8183348ab1b/@@download/cross_correlation_plot/ENCFF387RWUENCFF107ZQT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB683FVA michael-snyder:L-2225 "ENCFF387RWU,ENCFF107ZQT" HiSeq 2000 2016-10-09T17:10:05.547864+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Ky80jv1g5yGjfvVx0P9Q ENCSR167KBO https://www.encodeproject.org/experiments/ENCSR167KBO transcription factor ZNF316-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF908CYX https://www.encodeproject.org/files/ENCFF908CYX/@@download/ENCFF908CYX.bam ENCFF750YXZ https://www.encodeproject.org/files/ENCFF750YXZ/@@download/ENCFF750YXZ.bam 90.0 M 0 84.7 M 0.941 PE 100 100 native 36.8 M 0.0 M 35.3 M 0.784 0.98 0.98 47.26 215 1.49 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/71e1449d-6ca0-4c35-a377-53577d6b8073/@@download/cross_correlation_plot/ENCFF228VARENCFF739VNU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB825JJI michael-snyder:L-2226 "ENCFF739VNU,ENCFF228VAR" HiSeq 2000 2016-10-09T17:11:26.754340+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Kzj0jv1g5yGjfvVx0P9j ENCSR200JYP https://www.encodeproject.org/experiments/ENCSR200JYP transcription factor ZNF316-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF303ICH https://www.encodeproject.org/files/ENCFF303ICH/@@download/ENCFF303ICH.bam ENCFF480PKB https://www.encodeproject.org/files/ENCFF480PKB/@@download/ENCFF480PKB.bam 72.0 M 0 69.0 M 0.957 PE 100 100 native 29.9 M 0.0 M 23.2 M 0.645 0.78 0.77 4.35 230 1.10 3.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0a24747-7686-478d-8443-c612048ef6be/@@download/cross_correlation_plot/ENCFF121HAMENCFF890FRG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB320WIE michael-snyder:L-2221 "ENCFF890FRG,ENCFF121HAM" HiSeq 4000 2016-10-27T22:29:44.184385+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bZkj0369GJ6xQfbB7F5q8 ENCSR200JYP https://www.encodeproject.org/experiments/ENCSR200JYP transcription factor ZNF316-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF041ZVD https://www.encodeproject.org/files/ENCFF041ZVD/@@download/ENCFF041ZVD.bam ENCFF611FON https://www.encodeproject.org/files/ENCFF611FON/@@download/ENCFF611FON.bam 182.1 M 0 137.2 M 0.753 PE 100 100 native 59.0 M 0.0 M 46.7 M 0.513 0.79 0.79 4.75 210 1.15 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/de192c1b-790b-466c-a62f-848cb1d82832/@@download/cross_correlation_plot/ENCFF308CZXENCFF786NXV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB822CTA michael-snyder:L-2222 "ENCFF786NXV,ENCFF308CZX" HiSeq 4000 2016-10-27T22:35:16.538137+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bZx003694q32PPxBJ6ZxF ENCSR334HSW https://www.encodeproject.org/experiments/ENCSR334HSW transcription factor ZNF318-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF304KSV https://www.encodeproject.org/files/ENCFF304KSV/@@download/ENCFF304KSV.bam ENCFF637TXA https://www.encodeproject.org/files/ENCFF637TXA/@@download/ENCFF637TXA.bam 131.9 M 0 127.9 M 0.969 PE 100 100 native 55.3 M 0.0 M 29.5 M 0.448 0.54 0.54 2.15 225 1.06 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/3712ea69-2289-4893-9028-ad23b52d7286/@@download/cross_correlation_plot/ENCFF610TGHENCFF976NWF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB421OCV michael-snyder:L-2010 "ENCFF610TGH,ENCFF976NWF" HiSeq 4000 2016-09-16T03:24:15.283969+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZ6j03690qG5Zzk84B8X8 ENCSR334HSW https://www.encodeproject.org/experiments/ENCSR334HSW transcription factor ZNF318-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF373YTD https://www.encodeproject.org/files/ENCFF373YTD/@@download/ENCFF373YTD.bam ENCFF897DYL https://www.encodeproject.org/files/ENCFF897DYL/@@download/ENCFF897DYL.bam 108.9 M 0 104.9 M 0.964 PE 100 100 native 45.7 M 0.0 M 34.7 M 0.638 0.76 0.76 4.07 210 1.05 3.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/aec26c0a-0f1e-422d-926d-b9f7863f828b/@@download/cross_correlation_plot/ENCFF187NIJENCFF252HPP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB294QSB michael-snyder:L-2011 "ENCFF187NIJ,ENCFF252HPP" HiSeq 4000 2016-09-16T03:21:07.207314+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZ9j03695XjQpy58BVxZ0 ENCSR352BJL https://www.encodeproject.org/experiments/ENCSR352BJL transcription factor ZNF318-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF019RWB https://www.encodeproject.org/files/ENCFF019RWB/@@download/ENCFF019RWB.bam ENCFF616JGV https://www.encodeproject.org/files/ENCFF616JGV/@@download/ENCFF616JGV.bam 33.3 M 0 32.9 M 0.986 PE 100 100 native 14.6 M 0.0 M 12.7 M 0.762 0.87 0.87 7.77 220 1.13 3.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/536a0a08-5d14-4066-a08d-940d35686a07/@@download/cross_correlation_plot/ENCFF370TGNENCFF328DHW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB268TBX michael-snyder:L-2008 "ENCFF328DHW,ENCFF370TGN" HiSeq 2000 2016-10-09T17:09:19.745761+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k7j0jv1zBYbxYJ5zzyyJ ENCSR352BJL https://www.encodeproject.org/experiments/ENCSR352BJL transcription factor ZNF318-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF353EFN https://www.encodeproject.org/files/ENCFF353EFN/@@download/ENCFF353EFN.bam ENCFF696EGT https://www.encodeproject.org/files/ENCFF696EGT/@@download/ENCFF696EGT.bam 43.7 M 0 43.1 M 0.986 PE 100 100 native 19.1 M 0.0 M 17.5 M 0.804 0.92 0.92 12.53 220 1.10 3.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6c99df9-a5dd-4d98-8140-9d9dca2dfed9/@@download/cross_correlation_plot/ENCFF186WPXENCFF165TPB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB371YXR michael-snyder:L-2009 "ENCFF186WPX,ENCFF165TPB" HiSeq 2000 2016-10-09T17:10:19.745208+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k9Q0jv1vY92b0GYjVFVY ENCSR000EFP https://www.encodeproject.org/experiments/ENCSR000EFP transcription factor ZNF384-human K562 immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF140ZMN https://www.encodeproject.org/files/ENCFF140ZMN/@@download/ENCFF140ZMN.bam ENCFF576HJC https://www.encodeproject.org/files/ENCFF576HJC/@@download/ENCFF576HJC.bam 25.1 M 0 24.4 M 0.969 SE 36 36 native 0.0 M 18.0 M 17.3 M 0.689 0.96 0.97 32.03 90 1.17 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a39e975-d2a2-4c45-8b43-b835419140b6/@@download/cross_correlation_plot/ENCFF000ZFB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKB ENCFF000ZFB Illumina Genome Analyzer 2016-12-11T01:35:42.515451+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163fGQ03695Kj1j8qPQgkXf ENCSR000EFP https://www.encodeproject.org/experiments/ENCSR000EFP transcription factor ZNF384-human K562 immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF171VBC https://www.encodeproject.org/files/ENCFF171VBC/@@download/ENCFF171VBC.bam ENCFF920KZH https://www.encodeproject.org/files/ENCFF920KZH/@@download/ENCFF920KZH.bam 23.5 M 0 22.9 M 0.973 SE 36 36 native 0.0 M 17.0 M 16.4 M 0.698 0.97 0.97 36.78 100 1.24 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1881b0c-10c7-4954-b94a-bc3cba6a9a05/@@download/cross_correlation_plot/ENCFF000ZFD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ABK ENCFF000ZFD Illumina Genome Analyzer 2016-12-11T01:51:12.018406+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163fV80369F4yf5544b19G9 ENCSR011NOZ https://www.encodeproject.org/experiments/ENCSR011NOZ transcription factor ZNF407-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF362TFV https://www.encodeproject.org/files/ENCFF362TFV/@@download/ENCFF362TFV.bam ENCFF333SEC https://www.encodeproject.org/files/ENCFF333SEC/@@download/ENCFF333SEC.bam 49.4 M 0 47.4 M 0.960 PE 100 100 native 20.8 M 0.0 M 18.9 M 0.764 0.91 0.91 10.45 235 1.27 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ad9b51c-9822-431a-8daf-6bb5fd76e993/@@download/cross_correlation_plot/ENCFF379LAPENCFF253FCU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB559BCO michael-snyder:L-2231 "ENCFF379LAP,ENCFF253FCU" HiSeq 2000 2016-10-09T17:05:24.072701+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4P680jv1zBYbxYJ5zzzV2 ENCSR011NOZ https://www.encodeproject.org/experiments/ENCSR011NOZ transcription factor ZNF407-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF007ALP https://www.encodeproject.org/files/ENCFF007ALP/@@download/ENCFF007ALP.bam ENCFF255PTJ https://www.encodeproject.org/files/ENCFF255PTJ/@@download/ENCFF255PTJ.bam 60.1 M 0 52.9 M 0.881 PE 100 100 native 23.1 M 0.0 M 22.2 M 0.737 0.96 0.96 24.27 235 1.29 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/434db6b1-af42-47f7-b6fe-6b2822908627/@@download/cross_correlation_plot/ENCFF864KXIENCFF678SZB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB020AEM michael-snyder:L-2232 "ENCFF678SZB,ENCFF864KXI" HiSeq 2000 2016-10-09T17:06:19.759810+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4P7Q0jv1f60PxyZ9JGPJy ENCSR249BHQ https://www.encodeproject.org/experiments/ENCSR249BHQ transcription factor ZNF592-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF119ZDI https://www.encodeproject.org/files/ENCFF119ZDI/@@download/ENCFF119ZDI.bam ENCFF414QKE https://www.encodeproject.org/files/ENCFF414QKE/@@download/ENCFF414QKE.bam 87.2 M 0 86.0 M 0.986 PE 100 100 native 38.1 M 0.0 M 33.0 M 0.756 0.87 0.86 7.25 180 1.12 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee9a9ec0-eeda-464d-9a44-29fcc3d47d32/@@download/cross_correlation_plot/ENCFF283GNMENCFF451RCX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB939TSV michael-snyder:L-3394 "ENCFF451RCX,ENCFF283GNM" HiSeq 4000 2017-04-19T10:54:44.727884+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q80XQ0369Pq0zYPpqJvbPg ENCSR249BHQ https://www.encodeproject.org/experiments/ENCSR249BHQ transcription factor ZNF592-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF437IVZ https://www.encodeproject.org/files/ENCFF437IVZ/@@download/ENCFF437IVZ.bam ENCFF323QDU https://www.encodeproject.org/files/ENCFF323QDU/@@download/ENCFF323QDU.bam 78.8 M 0 77.4 M 0.983 PE 100 100 native 33.9 M 0.0 M 28.9 M 0.734 0.85 0.85 6.67 195 1.16 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d08153a-af77-445d-88a5-869b02b492bf/@@download/cross_correlation_plot/ENCFF706KLPENCFF669OSV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB291MXB michael-snyder:L-3395 "ENCFF669OSV,ENCFF706KLP" HiSeq 4000 2017-04-19T10:54:43.592441+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3q80x803692qXj74GK1Gvbg ENCSR175SZH https://www.encodeproject.org/experiments/ENCSR175SZH transcription factor ZSCAN29-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF122RSM https://www.encodeproject.org/files/ENCFF122RSM/@@download/ENCFF122RSM.bam ENCFF527NNL https://www.encodeproject.org/files/ENCFF527NNL/@@download/ENCFF527NNL.bam 47.8 M 0 47.0 M 0.983 PE 100 100 native 20.6 M 0.0 M 19.0 M 0.796 0.92 0.92 12.52 225 1.13 2.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/80c9732b-fe4d-49c3-9067-a7b36cec7a0f/@@download/cross_correlation_plot/ENCFF959OBEENCFF846BUV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB425FBF michael-snyder:L-2103 "ENCFF959OBE,ENCFF846BUV" HiSeq 2000 2016-10-09T17:02:13.316330+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46YQ0jv1XvFGkBjjfjQJV ENCSR175SZH https://www.encodeproject.org/experiments/ENCSR175SZH transcription factor ZSCAN29-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF450TNG https://www.encodeproject.org/files/ENCFF450TNG/@@download/ENCFF450TNG.bam ENCFF685DTH https://www.encodeproject.org/files/ENCFF685DTH/@@download/ENCFF685DTH.bam 49.4 M 0 48.2 M 0.977 PE 100 100 native 21.3 M 0.0 M 19.5 M 0.791 0.92 0.92 11.65 215 1.19 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd39dd23-f315-4064-b920-249ee8c5f53b/@@download/cross_correlation_plot/ENCFF368UTNENCFF025FSC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB217HKQ michael-snyder:L-2104 "ENCFF025FSC,ENCFF368UTN" HiSeq 2000 2016-10-09T17:02:01.783242+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46b00jv1f60PxyZ9JGP60 ENCSR635EXI https://www.encodeproject.org/experiments/ENCSR635EXI transcription factor ZSCAN29-human K562 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR780BBJ https://www.encodeproject.org/experiments/ENCSR780BBJ transcription factor ZZZ3-human K562 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF566EXS https://www.encodeproject.org/files/ENCFF566EXS/@@download/ENCFF566EXS.bam ENCFF653MWT https://www.encodeproject.org/files/ENCFF653MWT/@@download/ENCFF653MWT.bam 108.4 M 0 99.0 M 0.913 PE 100 100 native 43.1 M 0.0 M 33.5 M 0.617 0.78 0.78 4.39 235 1.06 3.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e170db7-2489-479c-af3d-7d6f475f98a2/@@download/cross_correlation_plot/ENCFF960PELENCFF491EOP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB662OQQ michael-snyder:L-2241 "ENCFF491EOP,ENCFF960PEL" HiSeq 4000 2016-09-16T03:20:19.435335+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyq900369JzPBF2JXk4PX2 ENCSR780BBJ https://www.encodeproject.org/experiments/ENCSR780BBJ transcription factor ZZZ3-human K562 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF548YYR https://www.encodeproject.org/files/ENCFF548YYR/@@download/ENCFF548YYR.bam ENCFF520QTI https://www.encodeproject.org/files/ENCFF520QTI/@@download/ENCFF520QTI.bam 61.8 M 0 59.8 M 0.968 PE 100 100 native 26.1 M 0.0 M 24.3 M 0.787 0.93 0.93 14.54 220 1.07 3.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/37f615f4-53e0-4219-b7a2-70f8cbf4571d/@@download/cross_correlation_plot/ENCFF233HVBENCFF778PUP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB154WSS michael-snyder:L-2288 "ENCFF233HVB,ENCFF778PUP" HiSeq 4000 2016-09-16T03:17:15.358087+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyqG0036903vFQkJzV6PqQ ENCSR254YRM https://www.encodeproject.org/experiments/ENCSR254YRM "transcription factor,RNA binding protein" CTCF-human liver tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF425QOU https://www.encodeproject.org/files/ENCFF425QOU/@@download/ENCFF425QOU.bam ENCFF395CME https://www.encodeproject.org/files/ENCFF395CME/@@download/ENCFF395CME.bam 32.5 M 0 31.8 M 0.979 SE 36 36 native 0.0 M 24.0 M 22.9 M 0.706 0.96 0.96 24.76 125 1.31 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/96b87385-6adf-43fe-b908-76ccc64923aa/@@download/cross_correlation_plot/ENCFF002EWZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB531NQK michael-snyder:CTCF_07-729_Liver_Rep1 ENCFF002EWZ Illumina Genome Analyzer IIx 2017-04-06T20:34:01.345680+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Xq70003698f3QVFK2gPb2b ENCSR254YRM https://www.encodeproject.org/experiments/ENCSR254YRM "transcription factor,RNA binding protein" CTCF-human liver tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF528IMZ https://www.encodeproject.org/files/ENCFF528IMZ/@@download/ENCFF528IMZ.bam ENCFF106CMZ https://www.encodeproject.org/files/ENCFF106CMZ/@@download/ENCFF106CMZ.bam 22.4 M 0 21.4 M 0.956 SE 36 36 native 0.0 M 16.5 M 14.9 M 0.667 0.91 0.92 12.99 125 2.35 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe9e16a3-62a6-41e1-8693-4e61b68f5e89/@@download/cross_correlation_plot/ENCFF002EXB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB761UMI michael-snyder:CTCF_07-729_Liver_Rep2 ENCFF002EXB Illumina Genome Analyzer IIx 2017-04-06T20:34:32.323997+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Xq72Q036912QfZFK6zBv88 ENCSR221IDN https://www.encodeproject.org/experiments/ENCSR221IDN control rabbit-IgG-control-human liver tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF904IZI https://www.encodeproject.org/files/ENCFF904IZI/@@download/ENCFF904IZI.bam ENCFF745BIL https://www.encodeproject.org/files/ENCFF745BIL/@@download/ENCFF745BIL.bam 28.9 M 0 28.4 M 0.984 SE 36 None 0.0 M 21.1 M 20.3 M 0.704 0.96 0.96 28.26 125 1.02 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/55302d87-0556-45cc-9568-13cd0cf03e28/@@download/cross_correlation_plot/ENCFF002EXA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB731IGZ michael-snyder:Rabbit_IgG_Liver_Rep1 ENCFF002EXA Illumina Genome Analyzer IIx 2016-05-06T18:13:39.815641+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq8Jj03690j2jgp42pQ2g8 ENCSR221IDN https://www.encodeproject.org/experiments/ENCSR221IDN control rabbit-IgG-control-human liver tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF410ZWA https://www.encodeproject.org/files/ENCFF410ZWA/@@download/ENCFF410ZWA.bam ENCFF493MYE https://www.encodeproject.org/files/ENCFF493MYE/@@download/ENCFF493MYE.bam 25.5 M 0 24.5 M 0.960 SE 36 None 0.0 M 18.3 M 16.2 M 0.635 0.89 0.89 8.85 125 1.04 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/bad0cb53-9fbb-4f1c-aae0-e6db2f0bd722/@@download/cross_correlation_plot/ENCFF002EXD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB468YEW michael-snyder:Rabbit_IgG_Liver_Rep2 ENCFF002EXD Illumina Genome Analyzer IIx 2016-05-06T18:13:31.693397+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq8PQ0369GkFPvq42zg1P0 ENCSR635OSG https://www.encodeproject.org/experiments/ENCSR635OSG transcription factor RAD21-human liver tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF915HOY https://www.encodeproject.org/files/ENCFF915HOY/@@download/ENCFF915HOY.bam ENCFF283OMH https://www.encodeproject.org/files/ENCFF283OMH/@@download/ENCFF283OMH.bam 31.4 M 0 30.8 M 0.981 SE 36 36 native 0.0 M 23.0 M 22.3 M 0.711 0.97 0.97 37.72 120 1.12 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b2252c2-cb20-459e-b5c0-e4f9e70d06f2/@@download/cross_correlation_plot/ENCFF002EXC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB377FLO michael-snyder:Rad21_ab992_Liver_Rep1 ENCFF002EXC Illumina Genome Analyzer IIx 2017-04-06T20:36:45.318752+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Xq6p803698f3QVFK2gPb2B ENCSR635OSG https://www.encodeproject.org/experiments/ENCSR635OSG transcription factor RAD21-human liver tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF529HAI https://www.encodeproject.org/files/ENCFF529HAI/@@download/ENCFF529HAI.bam ENCFF245EJX https://www.encodeproject.org/files/ENCFF245EJX/@@download/ENCFF245EJX.bam 29.5 M 0 28.8 M 0.976 SE 36 36 native 0.0 M 21.8 M 20.1 M 0.683 0.93 0.93 13.47 125 1.08 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/a90e148b-862c-4a5b-adc0-075c5101620a/@@download/cross_correlation_plot/ENCFF002EWY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB378GGD michael-snyder:Rad21_ab992_Liver_Rep2 ENCFF002EWY Illumina Genome Analyzer IIx 2017-04-06T20:37:03.795216+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Xq6x003692ZJBzFKGJ0J52 ENCSR300XAV https://www.encodeproject.org/experiments/ENCSR300XAV control Control-human LNCAP immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF727ZMM https://www.encodeproject.org/files/ENCFF727ZMM/@@download/ENCFF727ZMM.bam ENCFF593DGG https://www.encodeproject.org/files/ENCFF593DGG/@@download/ENCFF593DGG.bam 115.6 M 0 112.7 M 0.975 PE 100 100 native 47.5 M 0.0 M 46.8 M 0.809 0.98 0.98 66.33 230 1.03 5.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/d89aa407-6ee3-42b5-8e4c-6b8d168e3a2f/@@download/cross_correlation_plot/ENCFF580YIKENCFF975ZQI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB827RAP michael-snyder:L-2714 "ENCFF580YIK,ENCFF975ZQI" HiSeq 2000 2017-03-17T16:53:35.722791+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X4b003692Q4k4J13g2XKK ENCSR300XAV https://www.encodeproject.org/experiments/ENCSR300XAV control Control-human LNCAP immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF866GOS https://www.encodeproject.org/files/ENCFF866GOS/@@download/ENCFF866GOS.bam ENCFF487IET https://www.encodeproject.org/files/ENCFF487IET/@@download/ENCFF487IET.bam 98.8 M 0 93.9 M 0.951 PE 100 100 native 35.7 M 0.0 M 35.1 M 0.710 0.98 0.98 62.36 250 1.05 4.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f874d4d-f31d-44b6-bd96-b14ad842f87e/@@download/cross_correlation_plot/ENCFF008KXYENCFF350QRO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB793TTX michael-snyder:L-2715 "ENCFF350QRO,ENCFF008KXY" HiSeq 2000 2017-03-17T16:51:10.464703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X4y00369343BXGfKjQVf9 ENCSR315NAC https://www.encodeproject.org/experiments/ENCSR315NAC "transcription factor,RNA binding protein" CTCF-human LNCAP immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF500VJD https://www.encodeproject.org/files/ENCFF500VJD/@@download/ENCFF500VJD.bam ENCFF967VBI https://www.encodeproject.org/files/ENCFF967VBI/@@download/ENCFF967VBI.bam 105.0 M 0 102.7 M 0.979 PE 100 100 native 43.7 M 0.0 M 38.2 M 0.727 0.87 0.87 7.54 235 1.39 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/17298510-044a-4734-8d17-8859444320e0/@@download/cross_correlation_plot/ENCFF747RJLENCFF088PXS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB241MDZ michael-snyder:L-3076 "ENCFF747RJL,ENCFF088PXS" HiSeq 2000 2017-03-17T16:57:42.416497+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpGB8036992gjX69gK05J6 ENCSR315NAC https://www.encodeproject.org/experiments/ENCSR315NAC "transcription factor,RNA binding protein" CTCF-human LNCAP immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF117GZZ https://www.encodeproject.org/files/ENCFF117GZZ/@@download/ENCFF117GZZ.bam ENCFF685BTR https://www.encodeproject.org/files/ENCFF685BTR/@@download/ENCFF685BTR.bam 149.3 M 0 145.5 M 0.975 PE 100 100 native 61.4 M 0.0 M 55.2 M 0.739 0.90 0.90 9.57 280 1.04 3.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/695372cf-5d69-4bc5-b00f-afb7125e36e5/@@download/cross_correlation_plot/ENCFF863ZTU-ENCFF681LMY_pooledENCFF190SME-ENCFF202AUU_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB201WSI michael-snyder:L-3100 "ENCFF202AUU,ENCFF681LMY,ENCFF190SME,ENCFF863ZTU" HiSeq 2000 2017-07-20T09:49:04.612900+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpGJj03694KP6XGYYzkvQ8 ENCSR673WZL https://www.encodeproject.org/experiments/ENCSR673WZL "transcription factor,RNA binding protein" CTCF-human LNCAP immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF711LPL https://www.encodeproject.org/files/ENCFF711LPL/@@download/ENCFF711LPL.bam ENCFF148NPL https://www.encodeproject.org/files/ENCFF148NPL/@@download/ENCFF148NPL.bam 97.9 M 0 95.9 M 0.979 PE 100 100 native 40.7 M 0.0 M 39.2 M 0.801 0.96 0.96 27.22 260 1.23 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/73a400fb-0838-4cf8-abb8-69b5fdcdd522/@@download/cross_correlation_plot/ENCFF777VSOENCFF838CMG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB039OJJ michael-snyder:L-3077 "ENCFF838CMG,ENCFF777VSO" HiSeq 2000 2017-03-23T18:15:51.417876+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpGXj03690004P6x59Kqj9 ENCSR673WZL https://www.encodeproject.org/experiments/ENCSR673WZL "transcription factor,RNA binding protein" CTCF-human LNCAP immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF183SXR https://www.encodeproject.org/files/ENCFF183SXR/@@download/ENCFF183SXR.bam ENCFF515EQP https://www.encodeproject.org/files/ENCFF515EQP/@@download/ENCFF515EQP.bam 184.9 M 0 180.0 M 0.974 PE 100 100 native 75.9 M 0.0 M 62.5 M 0.676 0.82 0.82 5.32 320 1.05 2.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/997f962c-e538-4f17-a57d-56b9a76326ce/@@download/cross_correlation_plot/ENCFF616TAT-ENCFF677OAS_pooledENCFF425NMS-ENCFF717IEJ_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB380GDQ michael-snyder:L-3079 "ENCFF717IEJ,ENCFF677OAS,ENCFF425NMS,ENCFF616TAT" HiSeq 2000 2017-07-20T12:48:17.036915+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpGf803697zbGg6y93Q6Bk ENCSR228QDA https://www.encodeproject.org/experiments/ENCSR228QDA control Control-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF248GLG https://www.encodeproject.org/files/ENCFF248GLG/@@download/ENCFF248GLG.bam ENCFF445CQP https://www.encodeproject.org/files/ENCFF445CQP/@@download/ENCFF445CQP.bam 223.7 M 0 213.2 M 0.953 PE 100 100 native 90.7 M 0.0 M 83.2 M 0.744 0.92 0.92 12.06 205 1.02 11.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1437b39-576f-40e6-82a8-8cf4609b5b00/@@download/cross_correlation_plot/ENCFF185HSW-ENCFF112XAK_pooledENCFF856ZLL-ENCFF748PLK_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB790YEG,ENCLB829KKQ" "michael-snyder:L-2048,michael-snyder:L-2050" "ENCFF112XAK,ENCFF748PLK,ENCFF185HSW,ENCFF856ZLL" HiSeq 4000 2016-11-18T19:28:33.433384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0g22vj03695g0pYQ0GBqz6q ENCSR287HAL https://www.encodeproject.org/experiments/ENCSR287HAL control Control-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF416WIS https://www.encodeproject.org/files/ENCFF416WIS/@@download/ENCFF416WIS.bam ENCFF299THU https://www.encodeproject.org/files/ENCFF299THU/@@download/ENCFF299THU.bam 61.6 M 0 58.9 M 0.956 PE 100 100 native 25.4 M 0.0 M 23.9 M 0.775 0.94 0.94 16.86 125 1.10 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a60fa3b-8c00-4257-bbf7-103bf3acb2d7/@@download/cross_correlation_plot/ENCFF727RJUENCFF841DOK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB888EYI michael-snyder:L-3121 "ENCFF841DOK,ENCFF727RJU" HiSeq 4000 2016-10-27T22:25:24.070946+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bgJ803694q32PPxBJ6ZzQ ENCSR515JGE https://www.encodeproject.org/experiments/ENCSR515JGE control Control-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF047KMB https://www.encodeproject.org/files/ENCFF047KMB/@@download/ENCFF047KMB.bam ENCFF828ZRU https://www.encodeproject.org/files/ENCFF828ZRU/@@download/ENCFF828ZRU.bam 97.0 M 0 91.6 M 0.944 PE 100 100 native 38.8 M 0.0 M 31.6 M 0.652 0.82 0.81 5.29 215 1.04 3.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/13a8c6ff-60dd-489e-91be-f24021fe6aa0/@@download/cross_correlation_plot/ENCFF415UOPENCFF353KTB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB263TLV michael-snyder:L-2056 "ENCFF415UOP,ENCFF353KTB" HiSeq 4000 2016-11-02T23:13:26.354416+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbFY00369JvJFgVQQZXxZf ENCSR570HXV https://www.encodeproject.org/experiments/ENCSR570HXV control Control-human lower leg skin tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF868OFG https://www.encodeproject.org/files/ENCFF868OFG/@@download/ENCFF868OFG.bam ENCFF364SOT https://www.encodeproject.org/files/ENCFF364SOT/@@download/ENCFF364SOT.bam 57.9 M 0 56.1 M 0.969 PE 100 100 native 24.4 M 0.0 M 23.4 M 0.809 0.96 0.96 24.80 205 1.06 4.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/57055ee0-dd29-46c6-aab8-41041c659662/@@download/cross_correlation_plot/ENCFF586GNUENCFF876IGQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB829KKQ michael-snyder:L-2050 "ENCFF876IGQ,ENCFF586GNU" HiSeq 2000 2016-10-27T22:24:09.330811+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bpY003695YX1xgJBKFkpZ ENCSR821NQM https://www.encodeproject.org/experiments/ENCSR821NQM control Control-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF289LPR https://www.encodeproject.org/files/ENCFF289LPR/@@download/ENCFF289LPR.bam ENCFF889SSK https://www.encodeproject.org/files/ENCFF889SSK/@@download/ENCFF889SSK.bam 80.5 M 0 77.9 M 0.967 PE 100 100 native 34.1 M 0.0 M 30.5 M 0.757 0.89 0.89 9.19 130 1.07 3.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/659879ef-7333-4e82-85be-90bd38c6bae8/@@download/cross_correlation_plot/ENCFF890NBBENCFF261WQL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB586PXF michael-snyder:L-3309 "ENCFF890NBB,ENCFF261WQL" HiSeq 4000 2017-03-17T16:46:02.669042+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X3v803697jq2Z9KPqbpQP ENCSR978LBS https://www.encodeproject.org/experiments/ENCSR978LBS control Control-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF037IQW https://www.encodeproject.org/files/ENCFF037IQW/@@download/ENCFF037IQW.bam ENCFF600WTX https://www.encodeproject.org/files/ENCFF600WTX/@@download/ENCFF600WTX.bam 69.1 M 0 63.9 M 0.925 PE 100 100 native 26.3 M 0.0 M 25.0 M 0.723 0.95 0.95 20.26 275 1.00 0.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/39db84a2-9566-4c6c-bab6-65124889b544/@@download/cross_correlation_plot/ENCFF404TLYENCFF631KZD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB472LUW michael-snyder:L-3119 "ENCFF631KZD,ENCFF404TLY" HiSeq 4000 2016-10-27T22:13:52.591856+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08f04j03697KPkyX9BPQF7q ENCSR252XWG https://www.encodeproject.org/experiments/ENCSR252XWG "transcription factor,RNA binding protein" CTCF-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF076LAL https://www.encodeproject.org/files/ENCFF076LAL/@@download/ENCFF076LAL.bam ENCFF681NKV https://www.encodeproject.org/files/ENCFF681NKV/@@download/ENCFF681NKV.bam 129.3 M 0 104.9 M 0.811 PE 100 100 native 43.6 M 0.0 M 28.4 M 0.440 0.65 0.71 4.42 215 1.07 3.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5664d45-7705-4ff0-85aa-f1dc291fea4b/@@download/cross_correlation_plot/ENCFF782COMENCFF934TSI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB120LGG michael-snyder:L-1965 "ENCFF782COM,ENCFF934TSI" HiSeq 4000 2016-11-02T23:18:05.551465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbF3003695gKVkvJqG3Bbk ENCSR430TEE https://www.encodeproject.org/experiments/ENCSR430TEE "transcription factor,RNA binding protein" CTCF-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF056EFI https://www.encodeproject.org/files/ENCFF056EFI/@@download/ENCFF056EFI.bam ENCFF409WGR https://www.encodeproject.org/files/ENCFF409WGR/@@download/ENCFF409WGR.bam 68.3 M 0 66.6 M 0.975 PE 100 100 native 29.2 M 0.0 M 21.0 M 0.616 0.72 0.71 3.29 170 1.09 9.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/11cd133f-f948-4c21-9b6e-29b9a78e2e03/@@download/cross_correlation_plot/ENCFF644NPEENCFF794FMB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB189CCR michael-snyder:L-3117 "ENCFF644NPE,ENCFF794FMB" HiSeq 4000 2016-10-27T22:23:18.952901+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bjpj03695YX1xgJBKFkZ9 ENCSR582MTM https://www.encodeproject.org/experiments/ENCSR582MTM "transcription factor,RNA binding protein" CTCF-human lower leg skin tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF068GBU https://www.encodeproject.org/files/ENCFF068GBU/@@download/ENCFF068GBU.bam ENCFF945BJC https://www.encodeproject.org/files/ENCFF945BJC/@@download/ENCFF945BJC.bam 42.0 M 0 40.5 M 0.963 PE 100 100 native 17.7 M 0.0 M 12.8 M 0.608 0.72 0.71 3.30 230 1.12 4.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/5157b59f-d964-458e-a68f-58ad0e93747a/@@download/cross_correlation_plot/ENCFF572PHTENCFF379BKC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB307PST michael-snyder:L-1897 "ENCFF572PHT,ENCFF379BKC" HiSeq 2000 2016-11-02T23:10:56.519711+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbFjj0369G2j95P4Qbpbkq ENCSR727HME https://www.encodeproject.org/experiments/ENCSR727HME "transcription factor,RNA binding protein" CTCF-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF677KNU https://www.encodeproject.org/files/ENCFF677KNU/@@download/ENCFF677KNU.bam ENCFF037OWK https://www.encodeproject.org/files/ENCFF037OWK/@@download/ENCFF037OWK.bam 75.2 M 0 72.5 M 0.964 PE 100 100 native 31.0 M 0.0 M 27.9 M 0.743 0.90 0.90 9.87 140 1.07 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/1765b96f-fb45-4848-932a-6b73fabe9007/@@download/cross_correlation_plot/ENCFF581VOVENCFF272FAB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB633XGW michael-snyder:L-3120 "ENCFF272FAB,ENCFF581VOV" HiSeq 4000 2016-10-27T22:24:41.320082+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bv7j0369GJ6xQfbB7F600 ENCSR153AGA https://www.encodeproject.org/experiments/ENCSR153AGA transcription factor POLR2A-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF777ZLD https://www.encodeproject.org/files/ENCFF777ZLD/@@download/ENCFF777ZLD.bam ENCFF155CIR https://www.encodeproject.org/files/ENCFF155CIR/@@download/ENCFF155CIR.bam 155.6 M 0 130.5 M 0.839 PE 100 100 native 55.6 M 0.0 M 26.5 M 0.341 0.48 0.78 11.46 230 1.05 6.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd646ac5-104d-4c9c-bf20-4cec05597b88/@@download/cross_correlation_plot/ENCFF346MYJENCFF223FTQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB948AHZ michael-snyder:L-1964 "ENCFF223FTQ,ENCFF346MYJ" HiSeq 4000 2016-11-02T23:12:15.114398+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Gbj680369GGYp0V19j80j3 ENCSR175BVD https://www.encodeproject.org/experiments/ENCSR175BVD transcription factor POLR2A-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF006EYT https://www.encodeproject.org/files/ENCFF006EYT/@@download/ENCFF006EYT.bam ENCFF038YDB https://www.encodeproject.org/files/ENCFF038YDB/@@download/ENCFF038YDB.bam 209.1 M 0 196.4 M 0.939 PE 100 100 native 83.9 M 0.0 M 41.0 M 0.392 0.49 0.46 1.69 235 1.06 2.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/65aca9cb-f654-43c4-849c-019dc3089bf0/@@download/cross_correlation_plot/ENCFF599ZRC-ENCFF068NIQ_pooledENCFF229BOO-ENCFF844DFN_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB639XTJ,ENCLB005PTE" "michael-snyder:L-1894,michael-snyder:L-1896" "ENCFF844DFN,ENCFF229BOO,ENCFF599ZRC,ENCFF068NIQ" HiSeq 4000 2017-03-04T18:18:37.539099+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv1f00369F5YG43jX6QZxk ENCSR543DUC https://www.encodeproject.org/experiments/ENCSR543DUC transcription factor POLR2A-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF640KGV https://www.encodeproject.org/files/ENCFF640KGV/@@download/ENCFF640KGV.bam ENCFF259VOQ https://www.encodeproject.org/files/ENCFF259VOQ/@@download/ENCFF259VOQ.bam 82.0 M 0 76.3 M 0.930 PE 100 100 native 33.3 M 0.0 M 21.2 M 0.517 0.64 0.62 2.47 155 1.10 2.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/22057160-13b8-4355-b1fd-8f457f38df90/@@download/cross_correlation_plot/ENCFF641KSEENCFF246RFD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB537TEF michael-snyder:L-3305 "ENCFF246RFD,ENCFF641KSE" HiSeq 4000 2017-03-17T16:46:01.170197+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X3f80369PkGJ0J0bfPZ04 ENCSR888HXN https://www.encodeproject.org/experiments/ENCSR888HXN transcription factor POLR2A-human lower leg skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF456BVY https://www.encodeproject.org/files/ENCFF456BVY/@@download/ENCFF456BVY.bam ENCFF165ETH https://www.encodeproject.org/files/ENCFF165ETH/@@download/ENCFF165ETH.bam 70.6 M 0 67.3 M 0.954 PE 100 100 native 29.0 M 0.0 M 26.4 M 0.749 0.91 0.91 11.90 140 1.08 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/c28f9283-31d9-4e33-8d91-1b7243683fb3/@@download/cross_correlation_plot/ENCFF182BFUENCFF967GHE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB445TMP michael-snyder:L-3118 "ENCFF182BFU,ENCFF967GHE" HiSeq 4000 2016-10-27T22:19:04.133748+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bz6003695140QP5B2vxzb ENCSR231ENE https://www.encodeproject.org/experiments/ENCSR231ENE transcription factor ARID3A-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF413GYE https://www.encodeproject.org/files/ENCFF413GYE/@@download/ENCFF413GYE.bam ENCFF295SNS https://www.encodeproject.org/files/ENCFF295SNS/@@download/ENCFF295SNS.bam 79.3 M 0 76.8 M 0.968 PE 100 100 native 32.4 M 0.0 M 30.8 M 0.776 0.95 0.95 19.92 190 1.05 4.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6a24ec2-492f-4518-bbf5-33c03c56fa4c/@@download/cross_correlation_plot/ENCFF277XRYENCFF931OID.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB414GMO michael-snyder:L-3030 "ENCFF277XRY,ENCFF931OID" HiSeq 2000 2016-10-27T22:35:35.548106+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bbzj0369PQyG3V5B45025 ENCSR231ENE https://www.encodeproject.org/experiments/ENCSR231ENE transcription factor ARID3A-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF176VRR https://www.encodeproject.org/files/ENCFF176VRR/@@download/ENCFF176VRR.bam ENCFF460EJC https://www.encodeproject.org/files/ENCFF460EJC/@@download/ENCFF460EJC.bam 78.1 M 0 76.1 M 0.973 PE 100 100 native 32.3 M 0.0 M 29.5 M 0.755 0.92 0.91 11.48 200 1.05 5.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/8aa7eedf-4744-44b7-afc5-198340299265/@@download/cross_correlation_plot/ENCFF398BFNENCFF590PTX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB877GNU michael-snyder:L-3031 "ENCFF398BFN,ENCFF590PTX" HiSeq 2000 2016-10-27T22:34:36.972046+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bf30036923z1QYVBPp817 ENCSR866QPZ https://www.encodeproject.org/experiments/ENCSR866QPZ transcription factor ATF7-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF720FQJ https://www.encodeproject.org/files/ENCFF720FQJ/@@download/ENCFF720FQJ.bam ENCFF751CGH https://www.encodeproject.org/files/ENCFF751CGH/@@download/ENCFF751CGH.bam 43.5 M 0 42.2 M 0.971 PE 100 100 native 18.5 M 0.0 M 16.5 M 0.760 0.90 0.89 9.36 245 1.22 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/a78a527f-e69c-40a4-a419-4cd6da84de33/@@download/cross_correlation_plot/ENCFF140LSMENCFF120ALM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB946TFG michael-snyder:L-1744 "ENCFF140LSM,ENCFF120ALM" HiSeq 2000 2017-01-26T00:24:04.897689+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K96j03698k8BZGpKx02xP ENCSR866QPZ https://www.encodeproject.org/experiments/ENCSR866QPZ transcription factor ATF7-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF898MXH https://www.encodeproject.org/files/ENCFF898MXH/@@download/ENCFF898MXH.bam ENCFF885XJT https://www.encodeproject.org/files/ENCFF885XJT/@@download/ENCFF885XJT.bam 54.4 M 0 52.9 M 0.972 PE 100 100 native 23.0 M 0.0 M 22.1 M 0.811 0.96 0.96 26.15 220 1.11 2.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/878f1f25-abbc-4915-863a-663e90474f3f/@@download/cross_correlation_plot/ENCFF439BDUENCFF233XOC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB236MYS michael-snyder:L-1745 "ENCFF233XOC,ENCFF439BDU" HiSeq 2000 2017-01-25T23:41:06.350187+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB6803695ZBFgGYGy9pk2 ENCSR966YYJ https://www.encodeproject.org/experiments/ENCSR966YYJ "transcription factor,chromatin remodeller" BMI1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF996ASC https://www.encodeproject.org/files/ENCFF996ASC/@@download/ENCFF996ASC.bam ENCFF043WRO https://www.encodeproject.org/files/ENCFF043WRO/@@download/ENCFF043WRO.bam 66.5 M 0 65.0 M 0.978 PE 100 100 native 28.1 M 0.0 M 26.9 M 0.809 0.96 0.96 22.84 215 1.10 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/fdeb2a17-474f-4bc1-9d39-366dfdb47249/@@download/cross_correlation_plot/ENCFF825HMNENCFF240ZBS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB386SRZ michael-snyder:L-1838 "ENCFF240ZBS,ENCFF825HMN" HiSeq 2000 2017-05-05T10:01:53.088729+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yx100369GZzJv2JV389Q5 ENCSR966YYJ https://www.encodeproject.org/experiments/ENCSR966YYJ "transcription factor,chromatin remodeller" BMI1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF939AYG https://www.encodeproject.org/files/ENCFF939AYG/@@download/ENCFF939AYG.bam ENCFF994JQJ https://www.encodeproject.org/files/ENCFF994JQJ/@@download/ENCFF994JQJ.bam 75.8 M 0 73.8 M 0.974 PE 100 100 native 31.4 M 0.0 M 30.6 M 0.809 0.97 0.97 39.08 220 1.13 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/92f143c1-bfb4-44af-8c46-cde7f4d67b83/@@download/cross_correlation_plot/ENCFF605MKFENCFF309EQC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB425WSI michael-snyder:L-1707 "ENCFF605MKF,ENCFF309EQC" HiSeq 2000 2017-05-05T10:48:12.364823+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yx50036927yP67J9vVZ8f ENCSR360JOC https://www.encodeproject.org/experiments/ENCSR360JOC "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF365DEP https://www.encodeproject.org/files/ENCFF365DEP/@@download/ENCFF365DEP.bam ENCFF220AIH https://www.encodeproject.org/files/ENCFF220AIH/@@download/ENCFF220AIH.bam 59.3 M 0 57.9 M 0.976 PE 100 100 native 25.9 M 0.0 M 23.8 M 0.803 0.92 0.92 12.18 245 1.10 7.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/63589d64-7a8e-4568-befd-255d87b0351f/@@download/cross_correlation_plot/ENCFF126QCLENCFF082BKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB012TZO michael-snyder:L-366 "ENCFF126QCL,ENCFF082BKZ" HiSeq 2000 2016-10-09T17:03:36.276192+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45480jv1XYYX2Fxk3f52P ENCSR360JOC https://www.encodeproject.org/experiments/ENCSR360JOC "transcription factor,chromatin remodeller,RNA binding protein" CHD1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF281AZD https://www.encodeproject.org/files/ENCFF281AZD/@@download/ENCFF281AZD.bam ENCFF282NSV https://www.encodeproject.org/files/ENCFF282NSV/@@download/ENCFF282NSV.bam 107.0 M 0 104.0 M 0.972 PE 100 100 native 45.4 M 0.0 M 40.8 M 0.763 0.90 0.90 9.73 160 1.07 3.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a72b8ef-39af-4d56-89e7-0351b53ad74c/@@download/cross_correlation_plot/ENCFF149QCKENCFF191MNL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB328XTR michael-snyder:L-130 "ENCFF191MNL,ENCFF149QCK" HiSeq 2000 2016-10-09T17:09:50.731136+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv455j0jv1QxJBfj5Zb2pgP ENCSR217LRF https://www.encodeproject.org/experiments/ENCSR217LRF control Control-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF426RDP https://www.encodeproject.org/files/ENCFF426RDP/@@download/ENCFF426RDP.bam ENCFF466ILY https://www.encodeproject.org/files/ENCFF466ILY/@@download/ENCFF466ILY.bam 74.2 M 0 73.2 M 0.986 PE 100 100 None 32.8 M 0.0 M 30.4 M 0.819 0.93 0.93 13.59 265 1.06 7.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/9783908d-8536-4760-b6c5-f8394e53c699/@@download/cross_correlation_plot/ENCFF002DTUENCFF002EFI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB678IDC "michael-snyder:749_B_TruSeq_TTAGGC,michael-snyder:L-518" "ENCFF002EFI,ENCFF002DTU" HiSeq 2000 2016-05-06T18:19:50.009246+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq8B80369GkFPvq42zg1KQ ENCSR217LRF https://www.encodeproject.org/experiments/ENCSR217LRF control Control-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF291AFY https://www.encodeproject.org/files/ENCFF291AFY/@@download/ENCFF291AFY.bam ENCFF290GNL https://www.encodeproject.org/files/ENCFF290GNL/@@download/ENCFF290GNL.bam 84.6 M 0 83.6 M 0.988 PE 100 100 None 37.5 M 0.0 M 33.7 M 0.796 0.90 0.90 9.49 260 1.06 7.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/842cc366-1781-491a-8e5b-fcc6e5f7001d/@@download/cross_correlation_plot/ENCFF002EFGENCFF002DTS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB336TVW "michael-snyder:749_B_TruSeq_TGACCA,michael-snyder:L-519" "ENCFF002DTS,ENCFF002EFG" HiSeq 2000 2016-05-06T18:21:10.486612+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq8G00369GkFPvq42zg1Kj ENCSR239POD https://www.encodeproject.org/experiments/ENCSR239POD control Control-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF441UFO https://www.encodeproject.org/files/ENCFF441UFO/@@download/ENCFF441UFO.bam ENCFF519DMA https://www.encodeproject.org/files/ENCFF519DMA/@@download/ENCFF519DMA.bam 235.4 M 0 217.8 M 0.925 PE 100 100 native 66.7 M 0.0 M 61.0 M 0.518 0.91 0.91 11.36 340 1.14 4.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f78fdc2-8bac-4d55-8c54-a5b1f712a91a/@@download/cross_correlation_plot/ENCFF313MNH-ENCFF990RAJ_pooledENCFF074ZBL-ENCFF485UXE_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB602OOL michael-snyder:L-3006 "ENCFF485UXE,ENCFF990RAJ,ENCFF313MNH,ENCFF074ZBL" HiSeq 2000 2017-07-19T18:27:27.728876+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5g78Qj0369J9j126B4qbk1X ENCSR239POD https://www.encodeproject.org/experiments/ENCSR239POD control Control-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF544WWZ https://www.encodeproject.org/files/ENCFF544WWZ/@@download/ENCFF544WWZ.bam ENCFF119IUD https://www.encodeproject.org/files/ENCFF119IUD/@@download/ENCFF119IUD.bam 63.4 M 0 59.5 M 0.939 PE 100 100 native 20.8 M 0.0 M 20.4 M 0.642 0.98 0.98 47.37 370 1.10 4.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7a74999-c4cc-4941-8df2-d9de541d11c8/@@download/cross_correlation_plot/ENCFF838OWFENCFF131MCT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB201ELE michael-snyder:L-3007 "ENCFF838OWF,ENCFF131MCT" HiSeq 2000 2017-03-23T22:29:01.923192+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39XVPQ03690Q7X4FXKgzG10 ENCSR882IYK https://www.encodeproject.org/experiments/ENCSR882IYK control Control-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF746SKT https://www.encodeproject.org/files/ENCFF746SKT/@@download/ENCFF746SKT.bam ENCFF688JJI https://www.encodeproject.org/files/ENCFF688JJI/@@download/ENCFF688JJI.bam 120.4 M 0 103.8 M 0.862 PE 100 100 native 44.3 M 0.0 M 41.3 M 0.686 0.93 0.93 15.20 220 1.04 3.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/f102751c-3db1-445a-adad-79430909a76f/@@download/cross_correlation_plot/ENCFF311NEYENCFF708ZMD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB861VCR michael-snyder:L-3068 "ENCFF708ZMD,ENCFF311NEY" HiSeq 4000 2016-09-16T03:23:25.696204+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZ100369GX4Qp1Gv142Jp ENCSR882IYK https://www.encodeproject.org/experiments/ENCSR882IYK control Control-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF191XYH https://www.encodeproject.org/files/ENCFF191XYH/@@download/ENCFF191XYH.bam ENCFF347AGZ https://www.encodeproject.org/files/ENCFF347AGZ/@@download/ENCFF347AGZ.bam 69.2 M 0 67.2 M 0.971 PE 100 100 native 28.9 M 0.0 M 25.0 M 0.721 0.86 0.86 7.12 235 1.05 4.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5626aa3-c3d2-4a8e-af3c-e7c9efd8238a/@@download/cross_correlation_plot/ENCFF033KKQENCFF998BWE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB527VMP michael-snyder:L-3069 "ENCFF998BWE,ENCFF033KKQ" HiSeq 4000 2016-09-16T03:19:25.137789+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyZ3j03692xk39gZV14K6y ENCSR173EEH https://www.encodeproject.org/experiments/ENCSR173EEH transcription factor COPS2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF196PFK https://www.encodeproject.org/files/ENCFF196PFK/@@download/ENCFF196PFK.bam ENCFF530PHJ https://www.encodeproject.org/files/ENCFF530PHJ/@@download/ENCFF530PHJ.bam 102.9 M 0 97.0 M 0.943 PE 100 100 native 42.2 M 0.0 M 29.9 M 0.582 0.71 0.70 3.14 235 1.04 19.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/94a5915f-8a68-475b-9690-61ba9d57ed7d/@@download/cross_correlation_plot/ENCFF215HYEENCFF408WZK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB120XMX michael-snyder:L-3458 "ENCFF215HYE,ENCFF408WZK" HiSeq 4000 2017-06-06T18:24:26.643525+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Q7Q0369ByZ0V9126fK23 ENCSR173EEH https://www.encodeproject.org/experiments/ENCSR173EEH transcription factor COPS2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF785DDR https://www.encodeproject.org/files/ENCFF785DDR/@@download/ENCFF785DDR.bam ENCFF932TXI https://www.encodeproject.org/files/ENCFF932TXI/@@download/ENCFF932TXI.bam 120.0 M 0 116.7 M 0.972 PE 100 100 native 51.2 M 0.0 M 41.1 M 0.685 0.80 0.80 4.94 210 1.04 6.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/fca8bbc0-da39-4627-81df-d4ceab5cd7f4/@@download/cross_correlation_plot/ENCFF964LGLENCFF074EGX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB851DDN michael-snyder:L-3459 "ENCFF964LGL,ENCFF074EGX" HiSeq 4000 2017-06-06T18:25:19.927243+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Q9j0369479pZ90bg9Qz5 ENCSR897JAS https://www.encodeproject.org/experiments/ENCSR897JAS transcription factor CREB1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF520GWV https://www.encodeproject.org/files/ENCFF520GWV/@@download/ENCFF520GWV.bam ENCFF306ADO https://www.encodeproject.org/files/ENCFF306ADO/@@download/ENCFF306ADO.bam 76.5 M 0 74.3 M 0.971 PE 100 100 native 31.3 M 0.0 M 30.2 M 0.790 0.98 0.98 60.85 205 1.69 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a9eef9d-5d42-4853-8015-108e6a50f2a0/@@download/cross_correlation_plot/ENCFF220OFMENCFF653KYN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB830CNH michael-snyder:L-1788 "ENCFF220OFM,ENCFF653KYN" HiSeq 2000 2017-01-26T01:21:54.847529+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB100369424qKP3Yf7xbp ENCSR897JAS https://www.encodeproject.org/experiments/ENCSR897JAS transcription factor CREB1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF184EQF https://www.encodeproject.org/files/ENCFF184EQF/@@download/ENCFF184EQF.bam ENCFF206CHM https://www.encodeproject.org/files/ENCFF206CHM/@@download/ENCFF206CHM.bam 68.3 M 0 66.4 M 0.972 PE 100 100 native 28.7 M 0.0 M 27.3 M 0.799 0.95 0.95 21.60 210 1.56 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/cad6bcb8-72d0-4eed-971e-17e72acfdd7d/@@download/cross_correlation_plot/ENCFF841EZYENCFF804SDU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB295WCE michael-snyder:L-1789 "ENCFF841EZY,ENCFF804SDU" HiSeq 2000 2017-01-26T00:19:53.521241+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBQQ03694XqP2KpQJZpB6 ENCSR116QUR https://www.encodeproject.org/experiments/ENCSR116QUR RNA binding protein CSDE1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF185MXR https://www.encodeproject.org/files/ENCFF185MXR/@@download/ENCFF185MXR.bam ENCFF615DEK https://www.encodeproject.org/files/ENCFF615DEK/@@download/ENCFF615DEK.bam 106.2 M 0 101.3 M 0.954 PE 100 100 native 44.5 M 0.0 M 35.7 M 0.673 0.80 0.80 4.87 195 1.04 4.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8d34d4e-ae89-41bf-a4dc-78a4be5fbba1/@@download/cross_correlation_plot/ENCFF065UKLENCFF840TOI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB249QHK michael-snyder:L-3460 "ENCFF065UKL,ENCFF840TOI" HiSeq 4000 2017-06-06T18:23:20.163802+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3QGQ0369BkKBG9095vxyp ENCSR116QUR https://www.encodeproject.org/experiments/ENCSR116QUR RNA binding protein CSDE1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF331CAE https://www.encodeproject.org/files/ENCFF331CAE/@@download/ENCFF331CAE.bam ENCFF685LMX https://www.encodeproject.org/files/ENCFF685LMX/@@download/ENCFF685LMX.bam 107.5 M 0 105.3 M 0.979 PE 100 100 native 45.7 M 0.0 M 35.6 M 0.662 0.78 0.77 4.31 210 1.05 5.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/16993a80-3ce6-453f-a54d-e0dbe7bff9dc/@@download/cross_correlation_plot/ENCFF715UPTENCFF036IDQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB455KAV michael-snyder:L-3461 "ENCFF036IDQ,ENCFF715UPT" HiSeq 4000 2017-06-06T18:24:20.190806+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3QKQ0369P28ZF91J6pJ5y ENCSR636EYA https://www.encodeproject.org/experiments/ENCSR636EYA "transcription factor,chromatin remodeller" CTBP1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF095VQR https://www.encodeproject.org/files/ENCFF095VQR/@@download/ENCFF095VQR.bam ENCFF444XHI https://www.encodeproject.org/files/ENCFF444XHI/@@download/ENCFF444XHI.bam 66.5 M 0 64.8 M 0.974 PE 100 100 native 28.1 M 0.0 M 27.6 M 0.829 0.98 0.98 58.46 215 1.11 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4dce607-665b-4495-b6bd-c1ffadd30b20/@@download/cross_correlation_plot/ENCFF544FRMENCFF866MDO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB089GKC michael-snyder:L-1752 "ENCFF544FRM,ENCFF866MDO" HiSeq 2000 2016-10-09T17:38:54.808004+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qvQ0jv1fvz446Zf2J5kx ENCSR636EYA https://www.encodeproject.org/experiments/ENCSR636EYA "transcription factor,chromatin remodeller" CTBP1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF800UBL https://www.encodeproject.org/files/ENCFF800UBL/@@download/ENCFF800UBL.bam ENCFF860QRS https://www.encodeproject.org/files/ENCFF860QRS/@@download/ENCFF860QRS.bam 70.3 M 0 68.4 M 0.973 PE 100 100 native 29.6 M 0.0 M 29.1 M 0.829 0.99 0.99 66.96 205 1.09 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/532238ae-0258-4421-b09c-3b867b16a325/@@download/cross_correlation_plot/ENCFF461TIJENCFF769JRE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB915DZM michael-snyder:L-1753 "ENCFF769JRE,ENCFF461TIJ" HiSeq 2000 2016-10-09T17:38:15.424377+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qyj0jv1YFyQ90J3z9yVq ENCSR017CEO https://www.encodeproject.org/experiments/ENCSR017CEO transcription factor CUX1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF628FHG https://www.encodeproject.org/files/ENCFF628FHG/@@download/ENCFF628FHG.bam ENCFF133VVN https://www.encodeproject.org/files/ENCFF133VVN/@@download/ENCFF133VVN.bam 68.2 M 0 66.8 M 0.980 PE 100 100 native 29.9 M 0.0 M 25.1 M 0.735 0.84 0.83 5.76 240 1.08 4.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/686dd51e-6113-42bd-8ef5-a85c7130e361/@@download/cross_correlation_plot/ENCFF841SOAENCFF615YUR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB656YGH michael-snyder:L-515 "ENCFF615YUR,ENCFF841SOA" HiSeq 2000 2016-10-09T16:59:02.285119+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv473j0jv1XvFGkBjjfjQKP ENCSR017CEO https://www.encodeproject.org/experiments/ENCSR017CEO transcription factor CUX1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF096WSH https://www.encodeproject.org/files/ENCFF096WSH/@@download/ENCFF096WSH.bam ENCFF440WSC https://www.encodeproject.org/files/ENCFF440WSC/@@download/ENCFF440WSC.bam 72.5 M 0 71.0 M 0.979 PE 100 100 native 30.8 M 0.0 M 30.1 M 0.829 0.98 0.98 42.33 190 1.12 3.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/43cd0922-2241-47ca-8795-89d6eccbdbc2/@@download/cross_correlation_plot/ENCFF558UNFENCFF979GWR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB924UKO michael-snyder:L-138 "ENCFF979GWR,ENCFF558UNF" HiSeq 2000 2016-10-09T17:00:13.860178+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47580jv1XvFGkBjjfjQKg ENCSR330ADN https://www.encodeproject.org/experiments/ENCSR330ADN "RNA binding protein,transcription factor" DDX20-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF633BMT https://www.encodeproject.org/files/ENCFF633BMT/@@download/ENCFF633BMT.bam ENCFF758MYQ https://www.encodeproject.org/files/ENCFF758MYQ/@@download/ENCFF758MYQ.bam 70.4 M 0 66.6 M 0.946 PE 100 100 native 28.4 M 0.0 M 26.8 M 0.762 0.94 0.94 17.51 130 1.09 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/f884ceac-f916-480e-abff-44102c175df9/@@download/cross_correlation_plot/ENCFF299PPEENCFF388IIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB580EOY michael-snyder:L-3470 "ENCFF388IIQ,ENCFF299PPE" HiSeq 4000 2017-06-16T02:19:24.407938+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KKb803696X40G53k6G8Xg ENCSR330ADN https://www.encodeproject.org/experiments/ENCSR330ADN "RNA binding protein,transcription factor" DDX20-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF682IXJ https://www.encodeproject.org/files/ENCFF682IXJ/@@download/ENCFF682IXJ.bam ENCFF724SSE https://www.encodeproject.org/files/ENCFF724SSE/@@download/ENCFF724SSE.bam 95.3 M 0 82.4 M 0.865 PE 100 100 native 34.1 M 0.0 M 29.2 M 0.613 0.86 0.86 6.83 135 1.10 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/74b038f3-de53-421a-b87e-a59c772d6713/@@download/cross_correlation_plot/ENCFF964JRVENCFF064JDQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB775IYV michael-snyder:L-3471 "ENCFF964JRV,ENCFF064JDQ" HiSeq 4000 2017-06-16T05:23:01.674537+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F51KKjQ0369J56xV165K4GZ8 ENCSR234VCE https://www.encodeproject.org/experiments/ENCSR234VCE transcription factor DPF2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF024GIB https://www.encodeproject.org/files/ENCFF024GIB/@@download/ENCFF024GIB.bam ENCFF970HIB https://www.encodeproject.org/files/ENCFF970HIB/@@download/ENCFF970HIB.bam 54.3 M 0 53.2 M 0.981 PE 100 100 native 23.5 M 0.0 M 22.5 M 0.828 0.96 0.96 22.52 200 1.13 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5e4e0b5-1ed2-4077-8ce1-5c579e0042db/@@download/cross_correlation_plot/ENCFF875MOPENCFF105UNR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB862XAX michael-snyder:L-1922 "ENCFF105UNR,ENCFF875MOP" HiSeq 2000 2016-10-09T17:12:18.395198+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3g2j0jv1zBYbxYJ5zzyqF ENCSR234VCE https://www.encodeproject.org/experiments/ENCSR234VCE transcription factor DPF2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF411XGJ https://www.encodeproject.org/files/ENCFF411XGJ/@@download/ENCFF411XGJ.bam ENCFF232FAS https://www.encodeproject.org/files/ENCFF232FAS/@@download/ENCFF232FAS.bam 72.3 M 0 70.7 M 0.978 PE 100 100 native 31.0 M 0.0 M 29.7 M 0.821 0.96 0.96 24.09 200 1.08 2.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/41521f24-fdcb-4001-89fe-5303e2051118/@@download/cross_correlation_plot/ENCFF056SPKENCFF958CWG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB037QBB michael-snyder:L-1923 "ENCFF056SPK,ENCFF958CWG" HiSeq 2000 2016-10-09T17:13:50.483406+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3g400jv1g5yGjfvVx0KYp ENCSR502NRF https://www.encodeproject.org/experiments/ENCSR502NRF transcription factor ELF1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF558UMD https://www.encodeproject.org/files/ENCFF558UMD/@@download/ENCFF558UMD.bam ENCFF603PYG https://www.encodeproject.org/files/ENCFF603PYG/@@download/ENCFF603PYG.bam 95.7 M 0 91.3 M 0.954 PE 100 100 native 39.8 M 0.0 M 36.1 M 0.755 0.91 0.91 10.52 170 1.10 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb0d0b8b-abf1-4a38-9a0d-2abf06b0ac40/@@download/cross_correlation_plot/ENCFF071LVJENCFF932LBZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB690UAL michael-snyder:L-3525 "ENCFF932LBZ,ENCFF071LVJ" HiSeq 4000 2017-06-23T02:14:23.921408+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Y8Q036946VJy6YKjBJpg ENCSR502NRF https://www.encodeproject.org/experiments/ENCSR502NRF transcription factor ELF1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF629RTF https://www.encodeproject.org/files/ENCFF629RTF/@@download/ENCFF629RTF.bam ENCFF153MOU https://www.encodeproject.org/files/ENCFF153MOU/@@download/ENCFF153MOU.bam 119.2 M 0 106.2 M 0.891 PE 100 100 native 46.5 M 0.0 M 39.3 M 0.660 0.85 0.84 6.33 165 1.25 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb7f210d-90f4-44fd-979c-52339f414998/@@download/cross_correlation_plot/ENCFF159PHGENCFF216PTG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB782CIR michael-snyder:L-3526 "ENCFF159PHG,ENCFF216PTG" HiSeq 4000 2017-06-23T03:46:26.884727+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560YFj0369Bx4kZ6Y9vzGV2 ENCSR382WLL https://www.encodeproject.org/experiments/ENCSR382WLL transcription factor ELK1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF670XGC https://www.encodeproject.org/files/ENCFF670XGC/@@download/ENCFF670XGC.bam ENCFF682YWR https://www.encodeproject.org/files/ENCFF682YWR/@@download/ENCFF682YWR.bam 54.1 M 0 53.2 M 0.983 PE 100 100 native 23.8 M 0.0 M 21.7 M 0.803 0.91 0.91 10.95 205 1.10 8.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/90c94bfb-c16e-4da0-91a1-dbacefe7cf91/@@download/cross_correlation_plot/ENCFF110TONENCFF702MIH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB943QXQ michael-snyder:L-368 "ENCFF110TON,ENCFF702MIH" HiSeq 2000 2016-10-09T17:04:39.004377+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6PPQ0jv1fJXkp34kpvK2k ENCSR382WLL https://www.encodeproject.org/experiments/ENCSR382WLL transcription factor ELK1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF481DGS https://www.encodeproject.org/files/ENCFF481DGS/@@download/ENCFF481DGS.bam ENCFF548ATI https://www.encodeproject.org/files/ENCFF548ATI/@@download/ENCFF548ATI.bam 59.9 M 0 58.0 M 0.968 PE 100 100 native 25.4 M 0.0 M 23.0 M 0.768 0.90 0.90 10.15 235 1.11 4.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/77734c35-9d8b-4d02-9fbf-e2a091f0b87b/@@download/cross_correlation_plot/ENCFF555DZSENCFF392ROX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB335GWF michael-snyder:L-128 "ENCFF555DZS,ENCFF392ROX" HiSeq 2000 2016-10-09T17:04:57.883158+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6PX00jv1kK69v90ZyPZY1 ENCSR954WVZ https://www.encodeproject.org/experiments/ENCSR954WVZ transcription factor ESRRA-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF003FOB https://www.encodeproject.org/files/ENCFF003FOB/@@download/ENCFF003FOB.bam ENCFF622HOD https://www.encodeproject.org/files/ENCFF622HOD/@@download/ENCFF622HOD.bam 91.2 M 0 90.0 M 0.986 PE 100 100 native 40.3 M 0.0 M 37.1 M 0.813 0.92 0.92 12.11 170 1.07 4.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec08a4e6-e9d8-4c40-b820-c38c3660e4fc/@@download/cross_correlation_plot/ENCFF002DPQENCFF002EGU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB175BWY michael-snyder:652_A_Tru-seq_TGACCA "ENCFF002EGU,ENCFF002DPQ" HiSeq 2000 2016-10-09T17:05:59.294188+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46q80jv1zBYbxYJ5zzzFx ENCSR954WVZ https://www.encodeproject.org/experiments/ENCSR954WVZ transcription factor ESRRA-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF042XMV https://www.encodeproject.org/files/ENCFF042XMV/@@download/ENCFF042XMV.bam ENCFF241NAH https://www.encodeproject.org/files/ENCFF241NAH/@@download/ENCFF241NAH.bam 81.5 M 0 80.4 M 0.987 PE 100 100 native 36.0 M 0.0 M 32.0 M 0.787 0.89 0.89 8.81 225 1.08 5.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/3aa37e75-aa32-43f8-9457-c7c3fec3755a/@@download/cross_correlation_plot/ENCFF002EGMENCFF002DPT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB555FMS michael-snyder:652_B_Tru-seq_TGACCA "ENCFF002DPT,ENCFF002EGM" HiSeq 2000 2016-10-09T17:03:50.281609+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46x00jv1g5yGjfvVx0P1P ENCSR569XNP https://www.encodeproject.org/experiments/ENCSR569XNP transcription factor FOS-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF805LSA https://www.encodeproject.org/files/ENCFF805LSA/@@download/ENCFF805LSA.bam ENCFF560DJL https://www.encodeproject.org/files/ENCFF560DJL/@@download/ENCFF560DJL.bam 70.6 M 0 69.9 M 0.990 PE 100 100 native 31.6 M 0.0 M 30.2 M 0.856 0.96 0.96 22.80 245 1.35 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/688a4257-5f3a-4cce-89c4-70bbcbd6ae63/@@download/cross_correlation_plot/ENCFF464SOWENCFF354BWI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB859HNT michael-snyder:L-373 "ENCFF354BWI,ENCFF464SOW" HiSeq 2000 2016-10-09T17:14:45.777994+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yf00jv1xPyfX78Yz4gf9 ENCSR569XNP https://www.encodeproject.org/experiments/ENCSR569XNP transcription factor FOS-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF530DVX https://www.encodeproject.org/files/ENCFF530DVX/@@download/ENCFF530DVX.bam ENCFF697ZCU https://www.encodeproject.org/files/ENCFF697ZCU/@@download/ENCFF697ZCU.bam 95.4 M 0 93.3 M 0.977 PE 100 100 native 40.7 M 0.0 M 38.7 M 0.812 0.95 0.95 21.30 190 1.47 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bb162e4-0aea-440f-bcf1-9a0c7033982b/@@download/cross_correlation_plot/ENCFF326JSEENCFF359EHT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB200WLX michael-snyder:L-201 "ENCFF326JSE,ENCFF359EHT" HiSeq 2000 2016-10-09T17:17:46.266790+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3ygQ0jv1f60PxyZ9JGKzz ENCSR126YEB https://www.encodeproject.org/experiments/ENCSR126YEB transcription factor FOXA1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF331PWP https://www.encodeproject.org/files/ENCFF331PWP/@@download/ENCFF331PWP.bam ENCFF095QFL https://www.encodeproject.org/files/ENCFF095QFL/@@download/ENCFF095QFL.bam 45.3 M 0 43.9 M 0.969 PE 100 100 native 19.4 M 0.0 M 18.8 M 0.831 0.97 0.97 37.04 205 1.57 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba424200-46f2-4b00-80f2-f6b609abdb6f/@@download/cross_correlation_plot/ENCFF580EKNENCFF482CBA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB781ZNK michael-snyder:L-1816 "ENCFF482CBA,ENCFF580EKN" HiSeq 2000 2017-01-26T00:24:19.106082+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K91Q03695JvXVBgKgJgV2 ENCSR126YEB https://www.encodeproject.org/experiments/ENCSR126YEB transcription factor FOXA1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF159MOK https://www.encodeproject.org/files/ENCFF159MOK/@@download/ENCFF159MOK.bam ENCFF044NZP https://www.encodeproject.org/files/ENCFF044NZP/@@download/ENCFF044NZP.bam 41.7 M 0 41.0 M 0.981 PE 100 100 native 18.0 M 0.0 M 17.6 M 0.843 0.98 0.98 45.61 210 1.37 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f657ce4-680f-453b-a44a-5183f7365841/@@download/cross_correlation_plot/ENCFF774LQBENCFF611LYK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB003NXX michael-snyder:L-1817 "ENCFF774LQB,ENCFF611LYK" HiSeq 2000 2017-01-25T22:54:15.812228+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9vQ0369F2pz096jxpg9F ENCSR465VLK https://www.encodeproject.org/experiments/ENCSR465VLK transcription factor FOXK2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF060DER https://www.encodeproject.org/files/ENCFF060DER/@@download/ENCFF060DER.bam ENCFF508WTA https://www.encodeproject.org/files/ENCFF508WTA/@@download/ENCFF508WTA.bam 53.5 M 0 51.9 M 0.969 PE 100 100 native 22.4 M 0.0 M 21.1 M 0.790 0.94 0.94 17.42 205 1.08 4.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/361a5d6c-eb2a-4ad9-a04f-ffe15b157818/@@download/cross_correlation_plot/ENCFF404XXIENCFF580UJW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB772BAJ michael-snyder:L-2211 "ENCFF580UJW,ENCFF404XXI" HiSeq 2000 2016-10-09T17:03:26.575078+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4ByQ0jv1XYYX2Fxk3f59j ENCSR465VLK https://www.encodeproject.org/experiments/ENCSR465VLK transcription factor FOXK2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF357QWW https://www.encodeproject.org/files/ENCFF357QWW/@@download/ENCFF357QWW.bam ENCFF958MLY https://www.encodeproject.org/files/ENCFF958MLY/@@download/ENCFF958MLY.bam 69.1 M 0 67.5 M 0.976 PE 100 100 native 29.3 M 0.0 M 28.8 M 0.833 0.98 0.98 55.07 195 1.06 4.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2166bff-762a-4df5-9459-31e7b82474da/@@download/cross_correlation_plot/ENCFF791NQCENCFF645TLG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB400SMX michael-snyder:L-2270 "ENCFF645TLG,ENCFF791NQC" HiSeq 2000 2016-10-09T17:04:16.846114+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4F000jv1XYYX2Fxk3f5B1 ENCSR423RTK https://www.encodeproject.org/experiments/ENCSR423RTK transcription factor GATA3-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF143HRA https://www.encodeproject.org/files/ENCFF143HRA/@@download/ENCFF143HRA.bam ENCFF762XBT https://www.encodeproject.org/files/ENCFF762XBT/@@download/ENCFF762XBT.bam 218.1 M 0 177.1 M 0.812 PE 100 100 native 76.6 M 0.0 M 54.4 M 0.499 0.71 0.70 3.28 230 1.32 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/87ab9cc6-3230-49d5-8b39-b48700ed9654/@@download/cross_correlation_plot/ENCFF623RJMENCFF498UGH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB702DPT michael-snyder:L-2740 "ENCFF498UGH,ENCFF623RJM" HiSeq 4000 2016-09-16T03:27:46.385041+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyXZ803696yyJ91JYf9pGj ENCSR423RTK https://www.encodeproject.org/experiments/ENCSR423RTK transcription factor GATA3-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF523QZM https://www.encodeproject.org/files/ENCFF523QZM/@@download/ENCFF523QZM.bam ENCFF258QKU https://www.encodeproject.org/files/ENCFF258QKU/@@download/ENCFF258QKU.bam 128.8 M 0 108.1 M 0.839 PE 100 100 native 46.8 M 0.0 M 20.8 M 0.323 0.44 0.44 1.77 235 1.33 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7af1e8e-5178-483d-9f0a-668fb43e19b5/@@download/cross_correlation_plot/ENCFF044ZEJENCFF067SVP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB595WYZ michael-snyder:L-2741 "ENCFF067SVP,ENCFF044ZEJ" HiSeq 4000 2016-09-16T03:22:19.969101+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyXgQ03690qG5Zzk84B8VQ ENCSR389BLX https://www.encodeproject.org/experiments/ENCSR389BLX transcription factor GATAD2B-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF763DOU https://www.encodeproject.org/files/ENCFF763DOU/@@download/ENCFF763DOU.bam ENCFF852QTA https://www.encodeproject.org/files/ENCFF852QTA/@@download/ENCFF852QTA.bam 86.5 M 0 75.8 M 0.876 PE 100 100 native 32.2 M 0.0 M 29.3 M 0.678 0.91 0.91 11.06 220 1.05 3.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bf456b8-7872-4b03-9038-9336ab10ec06/@@download/cross_correlation_plot/ENCFF281DBVENCFF059WXQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB057JGF michael-snyder:L-2875 "ENCFF059WXQ,ENCFF281DBV" HiSeq 4000 2016-09-16T03:21:26.249996+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyf8j03695XjQpy58BVxZY ENCSR389BLX https://www.encodeproject.org/experiments/ENCSR389BLX transcription factor GATAD2B-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF003ETE https://www.encodeproject.org/files/ENCFF003ETE/@@download/ENCFF003ETE.bam ENCFF988WOM https://www.encodeproject.org/files/ENCFF988WOM/@@download/ENCFF988WOM.bam 109.5 M 0 100.6 M 0.918 PE 100 100 native 42.7 M 0.0 M 39.1 M 0.713 0.91 0.91 11.42 225 1.04 3.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/656aca4a-9a34-407d-a0f4-66721f460dfa/@@download/cross_correlation_plot/ENCFF402TFMENCFF612WBL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB955XMX michael-snyder:L-2876 "ENCFF402TFM,ENCFF612WBL" HiSeq 4000 2016-09-16T03:23:13.100034+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyfFQ0369PzXj14kJK8P1g ENCSR557JTZ https://www.encodeproject.org/experiments/ENCSR557JTZ "RNA binding protein,transcription factor" GTF2F1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF662RWY https://www.encodeproject.org/files/ENCFF662RWY/@@download/ENCFF662RWY.bam ENCFF643FMV https://www.encodeproject.org/files/ENCFF643FMV/@@download/ENCFF643FMV.bam 62.9 M 0 61.1 M 0.972 PE 100 100 native 26.3 M 0.0 M 25.2 M 0.800 0.96 0.96 23.36 195 1.09 6.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f89f6d5-6bca-44c7-9966-e44a7fba8761/@@download/cross_correlation_plot/ENCFF002DPOENCFF002EGK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB087GPC michael-snyder:653_A_Tru-seq_ATCACG "ENCFF002EGK,ENCFF002DPO" HiSeq 2000 2016-10-09T17:04:28.682453+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43100jv1QxJBfj5Zb2pb8 ENCSR557JTZ https://www.encodeproject.org/experiments/ENCSR557JTZ "RNA binding protein,transcription factor" GTF2F1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF069WYM https://www.encodeproject.org/files/ENCFF069WYM/@@download/ENCFF069WYM.bam ENCFF790CWC https://www.encodeproject.org/files/ENCFF790CWC/@@download/ENCFF790CWC.bam 90.4 M 0 88.7 M 0.982 PE 100 100 native 39.5 M 0.0 M 37.7 M 0.834 0.95 0.95 21.61 195 1.07 4.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c0338fe-b438-47ad-8351-c3b25162790d/@@download/cross_correlation_plot/ENCFF002EGSENCFF002DPS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB579DPE michael-snyder:653_B_Tru-seq_ATCACG "ENCFF002EGS,ENCFF002DPS" HiSeq 2000 2016-10-09T17:08:50.400983+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv432j0jv1XvFGkBjjfjQ94 ENCSR697CUP https://www.encodeproject.org/experiments/ENCSR697CUP transcription factor HCFC1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF170NQD https://www.encodeproject.org/files/ENCFF170NQD/@@download/ENCFF170NQD.bam ENCFF320IFH https://www.encodeproject.org/files/ENCFF320IFH/@@download/ENCFF320IFH.bam 68.6 M 0 67.8 M 0.989 PE 100 100 native 30.4 M 0.0 M 28.3 M 0.825 0.93 0.93 14.33 250 1.25 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5ad183b-35d3-4e1f-8b42-8cd492bdd0c0/@@download/cross_correlation_plot/ENCFF489ABLENCFF373VCW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB510IZB michael-snyder:L-375 "ENCFF373VCW,ENCFF489ABL" HiSeq 2000 2016-10-09T17:30:54.442322+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67GQ0jv1xFKXGVbpg0QGJ ENCSR697CUP https://www.encodeproject.org/experiments/ENCSR697CUP transcription factor HCFC1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF516CKJ https://www.encodeproject.org/files/ENCFF516CKJ/@@download/ENCFF516CKJ.bam ENCFF944MAN https://www.encodeproject.org/files/ENCFF944MAN/@@download/ENCFF944MAN.bam 94.4 M 0 91.5 M 0.969 PE 100 100 native 39.9 M 0.0 M 34.1 M 0.722 0.85 0.85 6.59 205 1.24 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe868092-714b-4e5b-b49a-3f94d2f51f30/@@download/cross_correlation_plot/ENCFF884TDTENCFF961XAS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB713RQL michael-snyder:L-132 "ENCFF961XAS,ENCFF884TDT" HiSeq 2000 2016-10-09T17:31:14.904363+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67P00jv1XQK7ZK9053Xgg ENCSR200CUA https://www.encodeproject.org/experiments/ENCSR200CUA "RNA binding protein,transcription factor" HDGF-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF106SIO https://www.encodeproject.org/files/ENCFF106SIO/@@download/ENCFF106SIO.bam ENCFF413NHT https://www.encodeproject.org/files/ENCFF413NHT/@@download/ENCFF413NHT.bam 75.9 M 0 74.2 M 0.978 PE 100 100 native 32.4 M 0.0 M 32.2 M 0.848 0.99 0.99 153.47 210 1.05 3.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc01e4ff-d34b-40e5-b945-b78ad79f69d7/@@download/cross_correlation_plot/ENCFF592NQIENCFF287QDK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB212QXI michael-snyder:L-2260 "ENCFF592NQI,ENCFF287QDK" HiSeq 2000 2016-10-09T17:31:31.902001+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv65Fj0jv1YFyQ90J3z9yZQ ENCSR200CUA https://www.encodeproject.org/experiments/ENCSR200CUA "RNA binding protein,transcription factor" HDGF-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF552YQY https://www.encodeproject.org/files/ENCFF552YQY/@@download/ENCFF552YQY.bam ENCFF495FDI https://www.encodeproject.org/files/ENCFF495FDI/@@download/ENCFF495FDI.bam 73.0 M 0 71.4 M 0.978 PE 100 100 native 31.1 M 0.0 M 30.9 M 0.845 0.99 0.99 139.24 210 1.05 4.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/7426fc38-75fa-4b23-8456-f2b6ad230dc9/@@download/cross_correlation_plot/ENCFF217CEAENCFF094RKI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB761YGZ michael-snyder:L-2261 "ENCFF094RKI,ENCFF217CEA" HiSeq 2000 2016-10-09T17:31:13.583919+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv65K00jv1fvz446Zf2J5v8 ENCSR109ODF https://www.encodeproject.org/experiments/ENCSR109ODF transcription factor HES1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF989MGN https://www.encodeproject.org/files/ENCFF989MGN/@@download/ENCFF989MGN.bam ENCFF372IXY https://www.encodeproject.org/files/ENCFF372IXY/@@download/ENCFF372IXY.bam 90.8 M 0 87.8 M 0.967 PE 100 100 native 38.0 M 0.0 M 36.3 M 0.799 0.95 0.95 21.43 205 1.04 3.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee0c17eb-9993-4662-9faa-f037bc279bcd/@@download/cross_correlation_plot/ENCFF039DVLENCFF103YIS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB764GBS michael-snyder:L-2262 "ENCFF103YIS,ENCFF039DVL" HiSeq 2000 2017-04-09T00:04:52.521060+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z06K80369PXf8XFKXjzZJ7 ENCSR109ODF https://www.encodeproject.org/experiments/ENCSR109ODF transcription factor HES1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF967SQJ https://www.encodeproject.org/files/ENCFF967SQJ/@@download/ENCFF967SQJ.bam ENCFF806ZMX https://www.encodeproject.org/files/ENCFF806ZMX/@@download/ENCFF806ZMX.bam 89.6 M 0 86.3 M 0.963 PE 100 100 native 37.3 M 0.0 M 36.4 M 0.812 0.98 0.98 43.66 185 1.05 2.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf48605b-39b4-499f-b6fe-0c186cd2ef31/@@download/cross_correlation_plot/ENCFF064WNXENCFF753IGR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB007RMT michael-snyder:L-2263 "ENCFF064WNX,ENCFF753IGR" HiSeq 2000 2017-04-09T00:05:36.789214+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z06Y80369PG2Y6FPBfKqKb ENCSR062HDL https://www.encodeproject.org/experiments/ENCSR062HDL transcription factor HSF1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF752IEK https://www.encodeproject.org/files/ENCFF752IEK/@@download/ENCFF752IEK.bam ENCFF037FUA https://www.encodeproject.org/files/ENCFF037FUA/@@download/ENCFF037FUA.bam 55.8 M 0 54.9 M 0.985 PE 100 100 native 24.6 M 0.0 M 22.6 M 0.810 0.92 0.92 11.69 190 1.10 10.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/76d013be-834a-4a56-a8d6-104eff0a1920/@@download/cross_correlation_plot/ENCFF002DPNENCFF002EGL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB452EKC michael-snyder:640_A_Tru-seq_ATCACG "ENCFF002EGL,ENCFF002DPN" HiSeq 2000 2016-10-09T17:02:53.452247+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Xv00jv1xPyfX78Yz4jJ1 ENCSR062HDL https://www.encodeproject.org/experiments/ENCSR062HDL transcription factor HSF1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF860ZZO https://www.encodeproject.org/files/ENCFF860ZZO/@@download/ENCFF860ZZO.bam ENCFF452ZIX https://www.encodeproject.org/files/ENCFF452ZIX/@@download/ENCFF452ZIX.bam 92.7 M 0 90.8 M 0.980 PE 100 100 native 40.8 M 0.0 M 34.4 M 0.742 0.84 0.84 6.19 210 1.06 5.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5c3d259-6e55-4a1d-b5f7-48eb5a19fe23/@@download/cross_correlation_plot/ENCFF002EGTENCFF002DPU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB724CXF michael-snyder:677_A_TruSeq_ATCACG "ENCFF002EGT,ENCFF002DPU" HiSeq 2000 2016-10-09T17:07:05.655954+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4XxQ0jv1vY92b0GYjVG8X ENCSR176EXN https://www.encodeproject.org/experiments/ENCSR176EXN transcription factor JUN-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF126FTH https://www.encodeproject.org/files/ENCFF126FTH/@@download/ENCFF126FTH.bam ENCFF114RER https://www.encodeproject.org/files/ENCFF114RER/@@download/ENCFF114RER.bam 57.2 M 0 55.9 M 0.978 PE 100 100 native 25.0 M 0.0 M 19.5 M 0.683 0.78 0.77 4.26 220 1.10 7.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ae5b684-2427-4745-8452-0d7e77e6a562/@@download/cross_correlation_plot/ENCFF002DPKENCFF002DUD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB720CSU michael-snyder:635_A_Tru-seq_TTAGGC "ENCFF002DUD,ENCFF002DPK" HiSeq 2000 2016-10-29T18:04:04.323364+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B28Qj0jv1X3z1QYVBPppYp ENCSR176EXN https://www.encodeproject.org/experiments/ENCSR176EXN transcription factor JUN-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF008AZP https://www.encodeproject.org/files/ENCFF008AZP/@@download/ENCFF008AZP.bam ENCFF015TAN https://www.encodeproject.org/files/ENCFF015TAN/@@download/ENCFF015TAN.bam 83.2 M 0 81.3 M 0.977 PE 100 100 native 36.5 M 0.0 M 33.8 M 0.812 0.92 0.92 12.91 205 1.06 6.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/955092a7-b4f1-489a-90dd-716b789ee1e4/@@download/cross_correlation_plot/ENCFF002EGNENCFF002DPR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB508LER michael-snyder:694_A_TruSeq_CGATGT "ENCFF002DPR,ENCFF002EGN" HiSeq 2000 2016-10-29T18:07:19.562550+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B28Z00jv1vJ6xQfbB7FXf5 ENCSR725ELR https://www.encodeproject.org/experiments/ENCSR725ELR RNA binding protein LARP7-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF946OVU https://www.encodeproject.org/files/ENCFF946OVU/@@download/ENCFF946OVU.bam ENCFF998NZU https://www.encodeproject.org/files/ENCFF998NZU/@@download/ENCFF998NZU.bam 68.5 M 0 61.0 M 0.890 PE 100 100 native 26.5 M 0.0 M 24.4 M 0.711 0.92 0.92 12.37 200 1.06 7.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/59fc7045-f9e8-4704-8238-dd35977260b1/@@download/cross_correlation_plot/ENCFF665APOENCFF969AXP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB649CZS michael-snyder:L-3464 "ENCFF665APO,ENCFF969AXP" HiSeq 4000 2017-05-05T21:56:44.223904+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469z0Q0369GBq3P37KJ0Kbf ENCSR725ELR https://www.encodeproject.org/experiments/ENCSR725ELR RNA binding protein LARP7-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF768VYD https://www.encodeproject.org/files/ENCFF768VYD/@@download/ENCFF768VYD.bam ENCFF504BOV https://www.encodeproject.org/files/ENCFF504BOV/@@download/ENCFF504BOV.bam 73.6 M 0 72.0 M 0.977 PE 100 100 native 31.2 M 0.0 M 28.5 M 0.773 0.91 0.91 11.45 195 1.05 7.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/052bbeeb-a7cb-457b-a218-1deadb179294/@@download/cross_correlation_plot/ENCFF911IYJENCFF526GZO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB143FKD michael-snyder:L-3465 "ENCFF911IYJ,ENCFF526GZO" HiSeq 4000 2017-05-05T22:37:12.294328+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469z480369GBq3P37KJ0Kbz ENCSR288IJC https://www.encodeproject.org/experiments/ENCSR288IJC "RNA binding protein,transcription factor" MAZ-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF136LTE https://www.encodeproject.org/files/ENCFF136LTE/@@download/ENCFF136LTE.bam ENCFF787ONU https://www.encodeproject.org/files/ENCFF787ONU/@@download/ENCFF787ONU.bam 74.6 M 0 73.5 M 0.985 PE 100 100 native 32.9 M 0.0 M 31.1 M 0.834 0.94 0.94 17.94 225 1.09 4.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/d98f5a4d-ae3c-446c-8ac8-deb4b3aa19a5/@@download/cross_correlation_plot/ENCFF002DPXENCFF002EGR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB307EOO michael-snyder:635_B_Tru-seq_CAGATC "ENCFF002DPX,ENCFF002EGR" HiSeq 2000 2016-10-09T17:06:31.746179+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48kQ0jv1f60PxyZ9JGP8g ENCSR288IJC https://www.encodeproject.org/experiments/ENCSR288IJC "RNA binding protein,transcription factor" MAZ-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF037VFP https://www.encodeproject.org/files/ENCFF037VFP/@@download/ENCFF037VFP.bam ENCFF876TLQ https://www.encodeproject.org/files/ENCFF876TLQ/@@download/ENCFF876TLQ.bam 80.7 M 0 79.1 M 0.981 PE 100 100 native 35.5 M 0.0 M 33.1 M 0.819 0.93 0.93 14.05 220 1.07 4.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/457171d6-943e-4b0e-9169-9dc155b52672/@@download/cross_correlation_plot/ENCFF002EGPENCFF002DPZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB852RKP michael-snyder:694_A_TruSeq_TGACCA "ENCFF002DPZ,ENCFF002EGP" HiSeq 2000 2016-10-09T17:06:38.299936+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48q00jv1zBYbxYJ5zzzJ0 ENCSR427BBI https://www.encodeproject.org/experiments/ENCSR427BBI transcription factor MLLT1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF266ROF https://www.encodeproject.org/files/ENCFF266ROF/@@download/ENCFF266ROF.bam ENCFF115ODC https://www.encodeproject.org/files/ENCFF115ODC/@@download/ENCFF115ODC.bam 59.9 M 0 58.2 M 0.973 PE 100 100 native 25.2 M 0.0 M 24.5 M 0.818 0.97 0.97 36.95 200 1.07 3.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/61b905bf-5611-4a04-9ae9-bd3bb976d301/@@download/cross_correlation_plot/ENCFF684TOLENCFF099ZTK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB082HVP michael-snyder:L-2209 "ENCFF099ZTK,ENCFF684TOL" HiSeq 2000 2016-10-09T17:04:14.807136+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43JQ0jv1zBYbxYJ5zzz8K ENCSR427BBI https://www.encodeproject.org/experiments/ENCSR427BBI transcription factor MLLT1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF953GQZ https://www.encodeproject.org/files/ENCFF953GQZ/@@download/ENCFF953GQZ.bam ENCFF527PRI https://www.encodeproject.org/files/ENCFF527PRI/@@download/ENCFF527PRI.bam 57.6 M 0 55.9 M 0.971 PE 100 100 native 24.2 M 0.0 M 23.7 M 0.823 0.98 0.98 49.42 205 1.08 3.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ceba346-fb2f-448c-96b8-a545891c2e7b/@@download/cross_correlation_plot/ENCFF085NFEENCFF214JGI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB047FRN michael-snyder:L-2268 "ENCFF214JGI,ENCFF085NFE" HiSeq 2000 2016-10-09T17:04:02.906755+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43P00jv1zBYbxYJ5zzz8g ENCSR460XGV https://www.encodeproject.org/experiments/ENCSR460XGV transcription factor MNT-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF929HOD https://www.encodeproject.org/files/ENCFF929HOD/@@download/ENCFF929HOD.bam ENCFF144UJH https://www.encodeproject.org/files/ENCFF144UJH/@@download/ENCFF144UJH.bam 72.1 M 0 70.8 M 0.982 PE 100 100 native 30.8 M 0.0 M 28.3 M 0.786 0.92 0.92 12.30 160 1.06 4.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3e21a73-34dd-4f8d-a906-bd225d539cc4/@@download/cross_correlation_plot/ENCFF832CXCENCFF160RVI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB123DHA michael-snyder:L-3426 "ENCFF160RVI,ENCFF832CXC" HiSeq 4000 2017-05-05T22:45:39.120066+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469xg003698KGf370q9771v ENCSR460XGV https://www.encodeproject.org/experiments/ENCSR460XGV transcription factor MNT-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF397CSO https://www.encodeproject.org/files/ENCFF397CSO/@@download/ENCFF397CSO.bam ENCFF576BBF https://www.encodeproject.org/files/ENCFF576BBF/@@download/ENCFF576BBF.bam 101.9 M 0 99.8 M 0.980 PE 100 100 native 43.6 M 0.0 M 41.1 M 0.807 0.94 0.94 17.09 130 1.05 3.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef132a32-e422-4c50-a8ea-a0d0e050b353/@@download/cross_correlation_plot/ENCFF091KYMENCFF556XVA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB258MRF michael-snyder:L-3427 "ENCFF091KYM,ENCFF556XVA" HiSeq 4000 2017-05-06T01:06:27.465383+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469xpQ03699xk39703jJy7Y ENCSR663ZZZ https://www.encodeproject.org/experiments/ENCSR663ZZZ transcription factor MNT-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF984BZB https://www.encodeproject.org/files/ENCFF984BZB/@@download/ENCFF984BZB.bam ENCFF174PVV https://www.encodeproject.org/files/ENCFF174PVV/@@download/ENCFF174PVV.bam 80.4 M 0 79.5 M 0.988 PE 100 100 native 35.7 M 0.0 M 31.7 M 0.789 0.89 0.89 8.66 215 1.20 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/8dcc1a84-dee6-4d84-bd54-52ecad1bce67/@@download/cross_correlation_plot/ENCFF002DQAENCFF002EGQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB933KAP michael-snyder:652_A_Tru-seq_ATCACG "ENCFF002DQA,ENCFF002EGQ" HiSeq 2000 2016-10-09T17:06:40.636020+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4QjQ0jv1g5yGjfvVx0PF0 ENCSR663ZZZ https://www.encodeproject.org/experiments/ENCSR663ZZZ transcription factor MNT-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF507UWE https://www.encodeproject.org/files/ENCFF507UWE/@@download/ENCFF507UWE.bam ENCFF440LWN https://www.encodeproject.org/files/ENCFF440LWN/@@download/ENCFF440LWN.bam 71.5 M 0 70.7 M 0.988 PE 100 100 native 31.7 M 0.0 M 27.2 M 0.761 0.86 0.86 6.73 245 1.17 3.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f8a253d-7fdd-4ed5-855a-f6727c9a52f3/@@download/cross_correlation_plot/ENCFF002EGYENCFF002DPY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB292GVU michael-snyder:652_B_Tru-seq_ATCACG "ENCFF002DPY,ENCFF002EGY" HiSeq 2000 2016-10-09T17:05:37.756561+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Qp80jv1XYYX2Fxk3f5Vp ENCSR680YNB https://www.encodeproject.org/experiments/ENCSR680YNB control mouse-IgG-control-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF373TNC https://www.encodeproject.org/files/ENCFF373TNC/@@download/ENCFF373TNC.bam ENCFF152ULI https://www.encodeproject.org/files/ENCFF152ULI/@@download/ENCFF152ULI.bam 61.2 M 0 60.4 M 0.987 PE 100 None 27.0 M 0.0 M 26.2 M 0.856 0.97 0.97 33.58 225 1.09 8.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/df1d64cd-72f8-4db7-8d2c-89dd31dc589c/@@download/cross_correlation_plot/ENCFF002ELWENCFF002ELX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB914UER michael-snyder:640_B_Tru-seq_CGATGT "ENCFF002ELW,ENCFF002ELX" HiSeq 2000 2016-05-06T18:12:45.615131+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqX4Q03690j2jgp42pQ32j ENCSR680YNB https://www.encodeproject.org/experiments/ENCSR680YNB control mouse-IgG-control-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF421EWU https://www.encodeproject.org/files/ENCFF421EWU/@@download/ENCFF421EWU.bam ENCFF816MXR https://www.encodeproject.org/files/ENCFF816MXR/@@download/ENCFF816MXR.bam 94.3 M 0 92.6 M 0.982 PE 100 None 41.7 M 0.0 M 35.6 M 0.756 0.86 0.85 6.75 175 1.06 5.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e84f275-5c2b-4271-9f57-8e597906b506/@@download/cross_correlation_plot/ENCFF002EHDENCFF002DTX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB681VTA michael-snyder:677_B_TruSeq_TGACCA "ENCFF002DTX,ENCFF002EHD" HiSeq 2000 2016-05-06T18:13:52.354886+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqX80036929FJGg42Xq24g ENCSR348JOJ https://www.encodeproject.org/experiments/ENCSR348JOJ transcription factor MTA1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF742QMN https://www.encodeproject.org/files/ENCFF742QMN/@@download/ENCFF742QMN.bam ENCFF123XST https://www.encodeproject.org/files/ENCFF123XST/@@download/ENCFF123XST.bam 81.2 M 0 80.3 M 0.989 PE 100 100 native 36.0 M 0.0 M 33.1 M 0.814 0.92 0.92 12.17 215 1.09 4.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/30f49073-6e1a-4c7b-a43d-03a5fe5b06af/@@download/cross_correlation_plot/ENCFF002EGVENCFF002EHC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285GDH michael-snyder:652_A_Tru-seq_CGATGT "ENCFF002EGV,ENCFF002EHC" HiSeq 2000 2016-10-09T17:11:58.446021+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv689Q0jv1YFyQ90J3z9ybF ENCSR348JOJ https://www.encodeproject.org/experiments/ENCSR348JOJ transcription factor MTA1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF316XFC https://www.encodeproject.org/files/ENCFF316XFC/@@download/ENCFF316XFC.bam ENCFF171UMF https://www.encodeproject.org/files/ENCFF171UMF/@@download/ENCFF171UMF.bam 74.1 M 0 73.2 M 0.987 PE 100 100 native 32.7 M 0.0 M 30.3 M 0.817 0.93 0.93 13.47 240 1.09 5.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/ccc1bf2a-75e9-4f23-8a33-34e5c0c08633/@@download/cross_correlation_plot/ENCFF002EGZENCFF002DTQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB434ZBI michael-snyder:652_B_Tru-seq_CGATGT "ENCFF002DTQ,ENCFF002EGZ" HiSeq 2000 2016-10-09T17:11:51.506825+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv68Fj0jv1x3KYJK9kQ04gJ ENCSR551ZDZ https://www.encodeproject.org/experiments/ENCSR551ZDZ transcription factor MTA2-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF525RIY https://www.encodeproject.org/files/ENCFF525RIY/@@download/ENCFF525RIY.bam ENCFF658IOY https://www.encodeproject.org/files/ENCFF658IOY/@@download/ENCFF658IOY.bam 57.7 M 0 56.1 M 0.973 PE 100 100 native 24.3 M 0.0 M 23.1 M 0.800 0.95 0.95 18.90 195 1.07 4.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/83e10e60-a2ba-4eff-b03a-93a0af3f0cce/@@download/cross_correlation_plot/ENCFF863ZBOENCFF604CSF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB960HVE michael-snyder:L-2212 "ENCFF604CSF,ENCFF863ZBO" HiSeq 2000 2016-10-09T17:10:15.756461+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pX80jv1XYYX2Fxk3f4f0 ENCSR551ZDZ https://www.encodeproject.org/experiments/ENCSR551ZDZ transcription factor MTA2-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF167ASQ https://www.encodeproject.org/files/ENCFF167ASQ/@@download/ENCFF167ASQ.bam ENCFF186DXS https://www.encodeproject.org/files/ENCFF186DXS/@@download/ENCFF186DXS.bam 87.1 M 0 85.1 M 0.977 PE 100 100 native 37.1 M 0.0 M 36.4 M 0.836 0.98 0.98 49.66 200 1.05 3.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c9e8a75-62ae-40c0-ab6d-91749b2c914c/@@download/cross_correlation_plot/ENCFF215BOJENCFF416JNG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB866CIU michael-snyder:L-2271 "ENCFF416JNG,ENCFF215BOJ" HiSeq 2000 2016-10-09T17:14:13.671483+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pYj0jv1vY92b0GYjVFXy ENCSR391KQC https://www.encodeproject.org/experiments/ENCSR391KQC transcription factor MTA3-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF025NCE https://www.encodeproject.org/files/ENCFF025NCE/@@download/ENCFF025NCE.bam ENCFF255ZLF https://www.encodeproject.org/files/ENCFF255ZLF/@@download/ENCFF255ZLF.bam 53.9 M 0 52.5 M 0.973 PE 100 100 native 22.7 M 0.0 M 22.0 M 0.816 0.97 0.97 31.72 210 1.07 3.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/230c8f20-cf30-4555-b276-d5f0e6e23999/@@download/cross_correlation_plot/ENCFF993ZYNENCFF911VAQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB442SWD michael-snyder:L-1746 "ENCFF911VAQ,ENCFF993ZYN" HiSeq 2000 2016-10-09T17:33:31.123115+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5x100jv1YFyQ90J3z9yX5 ENCSR391KQC https://www.encodeproject.org/experiments/ENCSR391KQC transcription factor MTA3-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF608ERF https://www.encodeproject.org/files/ENCFF608ERF/@@download/ENCFF608ERF.bam ENCFF348TXA https://www.encodeproject.org/files/ENCFF348TXA/@@download/ENCFF348TXA.bam 59.3 M 0 57.1 M 0.962 PE 100 100 native 24.5 M 0.0 M 23.6 M 0.795 0.96 0.96 28.18 185 1.07 3.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/853fa34a-99de-479a-8ba7-f2b7242552cf/@@download/cross_correlation_plot/ENCFF158FFUENCFF646AFJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB515SII michael-snyder:L-1747 "ENCFF158FFU,ENCFF646AFJ" HiSeq 2000 2016-10-09T17:33:51.806159+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5x380jv1fvz446Zf2J5pK ENCSR591EBL https://www.encodeproject.org/experiments/ENCSR591EBL transcription factor NBN-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF825XYA https://www.encodeproject.org/files/ENCFF825XYA/@@download/ENCFF825XYA.bam ENCFF965UGV https://www.encodeproject.org/files/ENCFF965UGV/@@download/ENCFF965UGV.bam 113.9 M 0 108.9 M 0.956 PE 100 100 native 46.4 M 0.0 M 43.4 M 0.761 0.93 0.93 15.04 165 1.06 2.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/4dc05ccf-b669-4344-96e1-0f126a7e851f/@@download/cross_correlation_plot/ENCFF736GCRENCFF908NBF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB607ABP michael-snyder:L-2264 "ENCFF736GCR,ENCFF908NBF" HiSeq 4000 2016-09-16T03:24:29.197936+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyyP803696Pxzk584jfj7v ENCSR591EBL https://www.encodeproject.org/experiments/ENCSR591EBL transcription factor NBN-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF819YSI https://www.encodeproject.org/files/ENCFF819YSI/@@download/ENCFF819YSI.bam ENCFF590RRO https://www.encodeproject.org/files/ENCFF590RRO/@@download/ENCFF590RRO.bam 119.5 M 0 115.1 M 0.963 PE 100 100 native 49.2 M 0.0 M 45.4 M 0.759 0.92 0.92 12.70 175 1.05 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/0eb496de-09e5-4aca-bad7-88e5a4984a4d/@@download/cross_correlation_plot/ENCFF943GTQENCFF732UEM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB352CPV michael-snyder:L-2265 "ENCFF732UEM,ENCFF943GTQ" HiSeq 4000 2016-09-16T03:21:53.166838+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyyX00369400B2BJvxzqX6 ENCSR582ZOA https://www.encodeproject.org/experiments/ENCSR582ZOA transcription factor NFIB-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF540GWM https://www.encodeproject.org/files/ENCFF540GWM/@@download/ENCFF540GWM.bam ENCFF950DZO https://www.encodeproject.org/files/ENCFF950DZO/@@download/ENCFF950DZO.bam 100.9 M 0 98.5 M 0.976 PE 100 100 native 42.5 M 0.0 M 41.1 M 0.815 0.97 0.97 30.42 210 1.12 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/af2b023a-55bc-4e9e-9e6f-c724ef650aa4/@@download/cross_correlation_plot/ENCFF091COJENCFF892KUR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB638RAR michael-snyder:L-2785 "ENCFF091COJ,ENCFF892KUR" HiSeq 2000 2017-01-31T17:49:58.476777+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28018Q036955b55FY24X5J6 ENCSR582ZOA https://www.encodeproject.org/experiments/ENCSR582ZOA transcription factor NFIB-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF565AIC https://www.encodeproject.org/files/ENCFF565AIC/@@download/ENCFF565AIC.bam ENCFF254TQA https://www.encodeproject.org/files/ENCFF254TQA/@@download/ENCFF254TQA.bam 73.9 M 0 71.9 M 0.973 PE 100 100 native 31.0 M 0.0 M 30.4 M 0.822 0.98 0.98 51.82 210 1.14 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/ac8bcc1f-36bd-4fd5-893c-24d896c4e5e7/@@download/cross_correlation_plot/ENCFF402HLRENCFF803NZA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB658QMK michael-snyder:L-2786 "ENCFF803NZA,ENCFF402HLR" HiSeq 2000 2017-01-31T17:46:09.450302+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2801K00369FB2f75bZ9VbVZ ENCSR702BYX https://www.encodeproject.org/experiments/ENCSR702BYX transcription factor NFIB-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF072JHV https://www.encodeproject.org/files/ENCFF072JHV/@@download/ENCFF072JHV.bam ENCFF287NGJ https://www.encodeproject.org/files/ENCFF287NGJ/@@download/ENCFF287NGJ.bam 60.5 M 0 55.1 M 0.912 PE 100 100 native 23.6 M 0.0 M 22.9 M 0.758 0.97 0.97 32.75 210 1.16 2.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b91b06b-db73-45e5-8747-971d133ade22/@@download/cross_correlation_plot/ENCFF643VJSENCFF961ECZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB774NMM michael-snyder:L-2766 "ENCFF643VJS,ENCFF961ECZ" HiSeq 2000 2017-01-31T17:45:35.475583+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2802zQ03691Fp8xFYBg4qX0 ENCSR702BYX https://www.encodeproject.org/experiments/ENCSR702BYX transcription factor NFIB-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF948EKK https://www.encodeproject.org/files/ENCFF948EKK/@@download/ENCFF948EKK.bam ENCFF339MCX https://www.encodeproject.org/files/ENCFF339MCX/@@download/ENCFF339MCX.bam 73.0 M 0 66.1 M 0.905 PE 100 100 native 28.5 M 0.0 M 27.3 M 0.748 0.96 0.96 24.59 210 1.19 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe1ba25d-7e6a-4114-9701-f94ae0083d6e/@@download/cross_correlation_plot/ENCFF627SNUENCFF559LBE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB976CBU michael-snyder:L-2767 "ENCFF627SNU,ENCFF559LBE" HiSeq 2000 2017-01-31T17:46:03.387798+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F28035803698PJpF5b3Y6PGP ENCSR248IMH https://www.encodeproject.org/experiments/ENCSR248IMH transcription factor NFRKB-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF422MGR https://www.encodeproject.org/files/ENCFF422MGR/@@download/ENCFF422MGR.bam ENCFF397HOV https://www.encodeproject.org/files/ENCFF397HOV/@@download/ENCFF397HOV.bam 67.9 M 0 66.5 M 0.980 PE 100 100 native 28.6 M 0.0 M 27.1 M 0.797 0.95 0.95 18.41 175 1.07 11.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ad5f39f-1364-498d-943b-388e649f259b/@@download/cross_correlation_plot/ENCFF616IVUENCFF157OJP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB421POK michael-snyder:L-3430 "ENCFF157OJP,ENCFF616IVU" HiSeq 4000 2017-05-05T22:00:28.827129+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469v5003698bkBg707zYXpX ENCSR248IMH https://www.encodeproject.org/experiments/ENCSR248IMH transcription factor NFRKB-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF276FCZ https://www.encodeproject.org/files/ENCFF276FCZ/@@download/ENCFF276FCZ.bam ENCFF042FPM https://www.encodeproject.org/files/ENCFF042FPM/@@download/ENCFF042FPM.bam 115.5 M 0 113.5 M 0.983 PE 100 100 native 49.4 M 0.0 M 44.5 M 0.771 0.90 0.90 9.89 160 1.05 5.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/76d1a41b-78b4-45c3-83f2-e423ff20c45c/@@download/cross_correlation_plot/ENCFF038CZCENCFF307UWA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB132WQV michael-snyder:L-3431 "ENCFF307UWA,ENCFF038CZC" HiSeq 4000 2017-05-06T01:40:10.112923+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F469v8Q03698bkBg707zYXpx ENCSR417DKD https://www.encodeproject.org/experiments/ENCSR417DKD transcription factor NFXL1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF186YOG https://www.encodeproject.org/files/ENCFF186YOG/@@download/ENCFF186YOG.bam ENCFF337ZCY https://www.encodeproject.org/files/ENCFF337ZCY/@@download/ENCFF337ZCY.bam 77.3 M 0 75.9 M 0.982 PE 100 100 native 33.2 M 0.0 M 29.9 M 0.773 0.90 0.90 9.99 225 1.06 10.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/350c4fa6-27b7-4859-a1f1-56cc488267b2/@@download/cross_correlation_plot/ENCFF546RYUENCFF881ACQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB938INZ michael-snyder:L-3480 "ENCFF881ACQ,ENCFF546RYU" HiSeq 4000 2017-06-06T18:20:59.703929+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Qz80369ByZ0V9126fK2q ENCSR417DKD https://www.encodeproject.org/experiments/ENCSR417DKD transcription factor NFXL1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF321NUU https://www.encodeproject.org/files/ENCFF321NUU/@@download/ENCFF321NUU.bam ENCFF388XZB https://www.encodeproject.org/files/ENCFF388XZB/@@download/ENCFF388XZB.bam 81.5 M 0 80.0 M 0.982 PE 100 100 native 34.8 M 0.0 M 32.1 M 0.789 0.92 0.92 12.91 220 1.06 6.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/433c6e43-7ecd-40f6-989d-b3fca4b2a144/@@download/cross_correlation_plot/ENCFF274EIRENCFF951FWS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB575SOG michael-snyder:L-3481 "ENCFF274EIR,ENCFF951FWS" HiSeq 4000 2017-06-06T18:20:02.094801+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3V1Q0369ByZ0V9126fK36 ENCSR912NMR https://www.encodeproject.org/experiments/ENCSR912NMR "RNA binding protein,transcription factor" NONO-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF061JUM https://www.encodeproject.org/files/ENCFF061JUM/@@download/ENCFF061JUM.bam ENCFF331IGC https://www.encodeproject.org/files/ENCFF331IGC/@@download/ENCFF331IGC.bam 55.6 M 0 53.4 M 0.960 PE 100 100 native 23.1 M 0.0 M 22.2 M 0.800 0.96 0.96 27.12 185 1.07 3.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d940c30-6f32-4004-a9b0-eb1816ed74fe/@@download/cross_correlation_plot/ENCFF767SQOENCFF527AMZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB006BON michael-snyder:L-1748 "ENCFF767SQO,ENCFF527AMZ" HiSeq 2000 2016-10-09T17:03:42.180356+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4G1Q0jv1XYYX2Fxk3f5Fv ENCSR912NMR https://www.encodeproject.org/experiments/ENCSR912NMR "RNA binding protein,transcription factor" NONO-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF650PQH https://www.encodeproject.org/files/ENCFF650PQH/@@download/ENCFF650PQH.bam ENCFF877QIF https://www.encodeproject.org/files/ENCFF877QIF/@@download/ENCFF877QIF.bam 63.5 M 0 61.2 M 0.963 PE 100 100 native 26.3 M 0.0 M 25.5 M 0.804 0.97 0.97 34.50 195 1.06 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9bb29da-45c0-4960-95e9-98356ff3dab7/@@download/cross_correlation_plot/ENCFF183SXOENCFF806SEC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB296KZV michael-snyder:L-1749 "ENCFF806SEC,ENCFF183SXO" HiSeq 2000 2016-10-09T17:03:38.848527+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4G380jv1QxJBfj5Zb2pyF ENCSR135ANT https://www.encodeproject.org/experiments/ENCSR135ANT transcription factor NRF1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF132SYW https://www.encodeproject.org/files/ENCFF132SYW/@@download/ENCFF132SYW.bam ENCFF241NLT https://www.encodeproject.org/files/ENCFF241NLT/@@download/ENCFF241NLT.bam 52.3 M 0 51.2 M 0.978 PE 100 100 native 22.9 M 0.0 M 21.7 M 0.829 0.95 0.95 18.71 210 1.13 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f980f07-1ea6-439b-b259-40118cbe7014/@@download/cross_correlation_plot/ENCFF163OQMENCFF633IRT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB139AGY michael-snyder:L-359 "ENCFF163OQM,ENCFF633IRT" HiSeq 2000 2016-10-09T17:13:00.591058+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yxj0jv1f60PxyZ9JGP0P ENCSR135ANT https://www.encodeproject.org/experiments/ENCSR135ANT transcription factor NRF1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF767EZN https://www.encodeproject.org/files/ENCFF767EZN/@@download/ENCFF767EZN.bam ENCFF388CCA https://www.encodeproject.org/files/ENCFF388CCA/@@download/ENCFF388CCA.bam 81.6 M 0 79.3 M 0.971 PE 100 100 native 35.0 M 0.0 M 32.1 M 0.786 0.92 0.92 11.95 210 1.08 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/140c6649-9520-41df-a577-62f320da4a2c/@@download/cross_correlation_plot/ENCFF539DMVENCFF484GUE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB212AIR michael-snyder:L-153 "ENCFF484GUE,ENCFF539DMV" HiSeq 2000 2016-10-09T17:15:35.250311+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yz80jv1vY92b0GYjVFfP ENCSR949IWY https://www.encodeproject.org/experiments/ENCSR949IWY transcription factor PAX8-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF140JDN https://www.encodeproject.org/files/ENCFF140JDN/@@download/ENCFF140JDN.bam ENCFF040LEJ https://www.encodeproject.org/files/ENCFF040LEJ/@@download/ENCFF040LEJ.bam 87.5 M 0 84.1 M 0.961 PE 100 100 native 35.8 M 0.0 M 31.7 M 0.725 0.89 0.89 8.60 205 1.06 3.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/a62fc19f-4f31-4304-874a-dd9eb30f7fb3/@@download/cross_correlation_plot/ENCFF309FAZENCFF140CYN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB711UYU michael-snyder:L-2623 "ENCFF140CYN,ENCFF309FAZ" HiSeq 4000 2016-09-16T03:22:26.480433+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyPJ8036954vKPp0b3gGJy ENCSR949IWY https://www.encodeproject.org/experiments/ENCSR949IWY transcription factor PAX8-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF591YZP https://www.encodeproject.org/files/ENCFF591YZP/@@download/ENCFF591YZP.bam ENCFF406AWQ https://www.encodeproject.org/files/ENCFF406AWQ/@@download/ENCFF406AWQ.bam 95.1 M 0 91.2 M 0.959 PE 100 100 native 38.6 M 0.0 M 36.8 M 0.773 0.95 0.95 21.42 200 1.05 2.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/225f82dc-14a5-4dba-94ad-a048bb4cb5f6/@@download/cross_correlation_plot/ENCFF380LXZENCFF480JJF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB638PNT michael-snyder:L-2624 "ENCFF380LXZ,ENCFF480JJF" HiSeq 4000 2016-09-16T03:23:52.586246+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyPV00369400B2BJvxzqG3 ENCSR986XYK https://www.encodeproject.org/experiments/ENCSR986XYK transcription factor PKNOX1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF557JBT https://www.encodeproject.org/files/ENCFF557JBT/@@download/ENCFF557JBT.bam ENCFF018NVG https://www.encodeproject.org/files/ENCFF018NVG/@@download/ENCFF018NVG.bam 71.8 M 0 70.0 M 0.974 PE 100 100 native 30.3 M 0.0 M 29.3 M 0.815 0.97 0.97 30.86 215 1.46 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a36d8c5-0cb4-4301-a3b3-55b763332b80/@@download/cross_correlation_plot/ENCFF405YUHENCFF112NVD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB263NPG michael-snyder:L-3022 "ENCFF112NVD,ENCFF405YUH" HiSeq 2000 2016-10-27T22:15:25.951849+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08f0B803695140QP5B2vy0b ENCSR986XYK https://www.encodeproject.org/experiments/ENCSR986XYK transcription factor PKNOX1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF695AWZ https://www.encodeproject.org/files/ENCFF695AWZ/@@download/ENCFF695AWZ.bam ENCFF938DTV https://www.encodeproject.org/files/ENCFF938DTV/@@download/ENCFF938DTV.bam 79.9 M 0 77.8 M 0.974 PE 100 100 native 33.8 M 0.0 M 32.1 M 0.803 0.95 0.95 19.62 210 1.60 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/663e7d72-8b40-4a0c-95bc-5b1fcfba8436/@@download/cross_correlation_plot/ENCFF060EBLENCFF037UVY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB698ZWU michael-snyder:L-3023 "ENCFF060EBL,ENCFF037UVY" HiSeq 2000 2016-10-27T22:15:02.576286+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08f0Kj03694q32PPxBJ6b4P ENCSR509DOK https://www.encodeproject.org/experiments/ENCSR509DOK RNA binding protein PPP1R10-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF245KGO https://www.encodeproject.org/files/ENCFF245KGO/@@download/ENCFF245KGO.bam ENCFF802DRE https://www.encodeproject.org/files/ENCFF802DRE/@@download/ENCFF802DRE.bam 109.2 M 0 104.6 M 0.959 PE 100 100 native 44.5 M 0.0 M 38.8 M 0.711 0.87 0.87 7.57 215 1.04 3.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/db4611ce-bdb0-4b66-85b5-1839d69298bc/@@download/cross_correlation_plot/ENCFF011DISENCFF535PJJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB993FIS michael-snyder:L-2873 "ENCFF535PJJ,ENCFF011DIS" HiSeq 4000 2016-09-16T03:22:23.390574+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyx5j036994Jx4PVBXKY0Z ENCSR509DOK https://www.encodeproject.org/experiments/ENCSR509DOK RNA binding protein PPP1R10-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF735YMN https://www.encodeproject.org/files/ENCFF735YMN/@@download/ENCFF735YMN.bam ENCFF892JML https://www.encodeproject.org/files/ENCFF892JML/@@download/ENCFF892JML.bam 111.3 M 0 106.3 M 0.956 PE 100 100 native 45.0 M 0.0 M 41.4 M 0.743 0.92 0.92 12.08 215 1.04 2.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6627133-0233-420e-ba60-cb2f240553c6/@@download/cross_correlation_plot/ENCFF289QMPENCFF474YZW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB228WFX michael-snyder:L-2874 "ENCFF289QMP,ENCFF474YZW" HiSeq 4000 2016-09-16T03:21:59.879049+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyx8Q0369J6bkz8ZJ7qyP3 ENCSR594UCI https://www.encodeproject.org/experiments/ENCSR594UCI control rabbit-IgG-control-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF911GNE https://www.encodeproject.org/files/ENCFF911GNE/@@download/ENCFF911GNE.bam ENCFF722CPV https://www.encodeproject.org/files/ENCFF722CPV/@@download/ENCFF722CPV.bam 76.2 M 0 75.1 M 0.984 PE 100 None 33.5 M 0.0 M 31.4 M 0.825 0.94 0.94 15.88 230 1.07 6.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/c385d933-bfe4-477a-85ce-22701b770b98/@@download/cross_correlation_plot/ENCFF002DUFENCFF002EGX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB534FYH michael-snyder:635_B_Tru-seq_CGATGT "ENCFF002EGX,ENCFF002DUF" HiSeq 2000 2016-05-06T18:15:06.800981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQ6Q0369PPK4xgv2b79G5 ENCSR594UCI https://www.encodeproject.org/experiments/ENCSR594UCI control rabbit-IgG-control-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF873GMF https://www.encodeproject.org/files/ENCFF873GMF/@@download/ENCFF873GMF.bam ENCFF510NGZ https://www.encodeproject.org/files/ENCFF510NGZ/@@download/ENCFF510NGZ.bam 95.1 M 0 93.7 M 0.986 PE 100 None 42.0 M 0.0 M 35.9 M 0.756 0.86 0.85 6.71 215 1.06 6.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/26b69a82-bedd-4fb3-8786-06d412c7d298/@@download/cross_correlation_plot/ENCFF002EHEENCFF002EHF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB706DGY michael-snyder:677_C_TruSeq_ATCACG "ENCFF002EHE,ENCFF002EHF" HiSeq 2000 2016-05-06T18:18:13.435155+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQ8803690j2jgp42pQ314 ENCSR442VBJ https://www.encodeproject.org/experiments/ENCSR442VBJ transcription factor RAD51-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF228WYN https://www.encodeproject.org/files/ENCFF228WYN/@@download/ENCFF228WYN.bam ENCFF619EIQ https://www.encodeproject.org/files/ENCFF619EIQ/@@download/ENCFF619EIQ.bam 74.2 M 0 55.3 M 0.745 PE 100 100 native 24.1 M 0.0 M 17.8 M 0.479 0.74 0.73 3.62 230 1.16 2.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/92539a4b-2ed8-43d4-b198-a42068edceac/@@download/cross_correlation_plot/ENCFF687ONIENCFF501ZOW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB885SCC michael-snyder:L-2716 "ENCFF687ONI,ENCFF501ZOW" HiSeq 2000 2017-04-09T00:00:40.740320+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z065Q0369KzxVxFKjfpJ7x ENCSR442VBJ https://www.encodeproject.org/experiments/ENCSR442VBJ transcription factor RAD51-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF351FEV https://www.encodeproject.org/files/ENCFF351FEV/@@download/ENCFF351FEV.bam ENCFF715ZZI https://www.encodeproject.org/files/ENCFF715ZZI/@@download/ENCFF715ZZI.bam 75.9 M 0 57.8 M 0.761 PE 100 100 native 25.2 M 0.0 M 18.8 M 0.494 0.74 0.74 3.65 230 1.14 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/d52446b2-2b95-4d39-8399-2f7bea34800e/@@download/cross_correlation_plot/ENCFF540YVRENCFF005ZXV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB907QEV michael-snyder:L-2717 "ENCFF005ZXV,ENCFF540YVR" HiSeq 2000 2017-04-09T00:00:59.614305+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3Z069j0369KzxVxFKjfpJ88 ENCSR391JII https://www.encodeproject.org/experiments/ENCSR391JII transcription factor RCOR1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF324WPH https://www.encodeproject.org/files/ENCFF324WPH/@@download/ENCFF324WPH.bam ENCFF981IGD https://www.encodeproject.org/files/ENCFF981IGD/@@download/ENCFF981IGD.bam 67.2 M 0 64.9 M 0.966 PE 100 100 native 28.0 M 0.0 M 26.4 M 0.787 0.94 0.94 17.43 215 1.06 3.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8806b3c-96b1-47dd-bf03-79750d7aa2c1/@@download/cross_correlation_plot/ENCFF693IXSENCFF720JCW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB203VJE michael-snyder:L-334 "ENCFF693IXS,ENCFF720JCW" HiSeq 2000 2016-10-09T17:06:35.915721+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Q600jv1k8yv12k9xk5jk ENCSR391JII https://www.encodeproject.org/experiments/ENCSR391JII transcription factor RCOR1-human MCF-7 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF097RWA https://www.encodeproject.org/files/ENCFF097RWA/@@download/ENCFF097RWA.bam ENCFF684LQZ https://www.encodeproject.org/files/ENCFF684LQZ/@@download/ENCFF684LQZ.bam 39.0 M 0 37.9 M 0.971 PE 100 100 native 16.5 M 0.0 M 15.7 M 0.806 0.95 0.95 20.60 215 1.10 3.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/0916b56c-a67f-4887-852c-92d3ddc67898/@@download/cross_correlation_plot/ENCFF045KIHENCFF432IRL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB054TEA michael-snyder:L-335 "ENCFF045KIH,ENCFF432IRL" HiSeq 2000 2016-10-09T17:03:23.194998+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Q880jv1fJXkp34kpvK33 ENCSR066TET https://www.encodeproject.org/experiments/ENCSR066TET transcription factor RFX1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF299JYS https://www.encodeproject.org/files/ENCFF299JYS/@@download/ENCFF299JYS.bam ENCFF947CLR https://www.encodeproject.org/files/ENCFF947CLR/@@download/ENCFF947CLR.bam 93.3 M 0 90.3 M 0.968 PE 100 100 native 40.8 M 0.0 M 36.5 M 0.783 0.90 0.89 9.34 260 1.81 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d0efc0e-6737-40ed-b984-1d8128e87b0b/@@download/cross_correlation_plot/ENCFF354AKNENCFF352BSY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB462SZP michael-snyder:L-440 "ENCFF352BSY,ENCFF354AKN" HiSeq 2000 2016-10-09T17:17:52.513863+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pB80jv1QxJBfj5Zb2pJk ENCSR066TET https://www.encodeproject.org/experiments/ENCSR066TET transcription factor RFX1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF803ZFE https://www.encodeproject.org/files/ENCFF803ZFE/@@download/ENCFF803ZFE.bam ENCFF640CQY https://www.encodeproject.org/files/ENCFF640CQY/@@download/ENCFF640CQY.bam 72.3 M 0 70.9 M 0.981 PE 100 100 native 31.5 M 0.0 M 30.4 M 0.842 0.97 0.97 30.97 230 1.74 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/88d06369-a6c8-47e9-9e72-cb20ddb1b738/@@download/cross_correlation_plot/ENCFF424RZZENCFF213VGJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB457VCC michael-snyder:L-140 "ENCFF213VGJ,ENCFF424RZZ" HiSeq 2000 2016-10-09T17:11:19.830228+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pG00jv1zBYbxYJ5zzyzf ENCSR788XNX https://www.encodeproject.org/experiments/ENCSR788XNX transcription factor RFX1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF804LEF https://www.encodeproject.org/files/ENCFF804LEF/@@download/ENCFF804LEF.bam ENCFF807YXR https://www.encodeproject.org/files/ENCFF807YXR/@@download/ENCFF807YXR.bam 76.2 M 0 49.2 M 0.645 PE 100 100 native 21.5 M 0.0 M 21.0 M 0.551 0.98 0.98 46.72 215 1.44 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/b54f4e93-8095-4338-948e-26d404f3b787/@@download/cross_correlation_plot/ENCFF364UFNENCFF601NHF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB614MWF michael-snyder:L-1812 "ENCFF364UFN,ENCFF601NHF" HiSeq 2000 2016-10-08T07:44:51.413811+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbK880jv1qz5v4z8X7v4xF ENCSR788XNX https://www.encodeproject.org/experiments/ENCSR788XNX transcription factor RFX1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF717YUB https://www.encodeproject.org/files/ENCFF717YUB/@@download/ENCFF717YUB.bam ENCFF430ZSU https://www.encodeproject.org/files/ENCFF430ZSU/@@download/ENCFF430ZSU.bam 45.2 M 0 44.0 M 0.974 PE 100 100 native 19.3 M 0.0 M 18.8 M 0.831 0.97 0.97 36.97 220 1.47 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f9b0e0a-59b7-42b3-99d9-69cb61214328/@@download/cross_correlation_plot/ENCFF806WBEENCFF541INS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB401WOW michael-snyder:L-1811 "ENCFF541INS,ENCFF806WBE" HiSeq 2000 2016-10-08T07:43:13.119357+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/BzqbKBQ0jv1k8Jzvv9Z4ZY2X ENCSR924TVL https://www.encodeproject.org/experiments/ENCSR924TVL transcription factor RFX5-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF243OVT https://www.encodeproject.org/files/ENCFF243OVT/@@download/ENCFF243OVT.bam ENCFF234MEE https://www.encodeproject.org/files/ENCFF234MEE/@@download/ENCFF234MEE.bam 69.1 M 0 67.3 M 0.975 PE 100 100 native 29.1 M 0.0 M 27.6 M 0.801 0.95 0.95 20.31 200 1.18 2.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/7217cc98-e007-436c-97d8-637c814a3e06/@@download/cross_correlation_plot/ENCFF002EHGENCFF002EHA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB797PRV michael-snyder:653_A_Tru-seq_CGATGT "ENCFF002EHG,ENCFF002EHA" HiSeq 2000 2016-10-29T18:06:33.748108+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29180jv1f68063VP6bfY4 ENCSR924TVL https://www.encodeproject.org/experiments/ENCSR924TVL transcription factor RFX5-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF689GLS https://www.encodeproject.org/files/ENCFF689GLS/@@download/ENCFF689GLS.bam ENCFF028JDJ https://www.encodeproject.org/files/ENCFF028JDJ/@@download/ENCFF028JDJ.bam 86.6 M 0 84.8 M 0.980 PE 100 100 native 38.0 M 0.0 M 36.1 M 0.834 0.95 0.95 20.12 200 1.15 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/72cbe719-f53c-43e8-b446-3152e767c8d0/@@download/cross_correlation_plot/ENCFF002DTWENCFF002DUG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB488YKU michael-snyder:653_B_Tru-seq_CGATGT "ENCFF002DUG,ENCFF002DTW" HiSeq 2000 2016-10-29T18:08:54.771052+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B29400jv1pj2bF0JP9K2g0 ENCSR449KQV https://www.encodeproject.org/experiments/ENCSR449KQV "transcription factor,chromatin remodeller" RNF2-human MCF-7 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR468LUO https://www.encodeproject.org/experiments/ENCSR468LUO transcription factor SIN3A-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF091EBR https://www.encodeproject.org/files/ENCFF091EBR/@@download/ENCFF091EBR.bam ENCFF933XIC https://www.encodeproject.org/files/ENCFF933XIC/@@download/ENCFF933XIC.bam 69.7 M 0 67.5 M 0.969 PE 100 100 native 29.1 M 0.0 M 28.3 M 0.812 0.97 0.97 36.67 210 1.14 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a754aa3-9282-4e91-9fee-cfe4fd425e42/@@download/cross_correlation_plot/ENCFF733YZZENCFF354HNG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB170VAD michael-snyder:L-391 "ENCFF354HNG,ENCFF733YZZ" HiSeq 2000 2016-10-09T17:08:34.785384+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Px80jv1zBYbxYJ5zzzVv ENCSR468LUO https://www.encodeproject.org/experiments/ENCSR468LUO transcription factor SIN3A-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF801GXY https://www.encodeproject.org/files/ENCFF801GXY/@@download/ENCFF801GXY.bam ENCFF007SAN https://www.encodeproject.org/files/ENCFF007SAN/@@download/ENCFF007SAN.bam 90.1 M 0 88.1 M 0.978 PE 100 100 native 38.8 M 0.0 M 37.0 M 0.822 0.96 0.96 22.14 170 1.13 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e6970bd-1317-48d1-97bf-c21f551c9a0a/@@download/cross_correlation_plot/ENCFF175HFFENCFF543HLG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB362YTD michael-snyder:L-133 "ENCFF175HFF,ENCFF543HLG" HiSeq 2000 2016-10-09T17:10:14.117276+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Pz00jv1zBYbxYJ5zzzX5 ENCSR279IEM https://www.encodeproject.org/experiments/ENCSR279IEM transcription factor SIX4-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF363DXD https://www.encodeproject.org/files/ENCFF363DXD/@@download/ENCFF363DXD.bam ENCFF513FMF https://www.encodeproject.org/files/ENCFF513FMF/@@download/ENCFF513FMF.bam 183.3 M 0 177.9 M 0.971 PE 100 100 native 76.5 M 0.0 M 71.0 M 0.775 0.93 0.93 14.01 205 1.03 2.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/e938e445-baa3-425d-b2f2-99bb6fc2be03/@@download/cross_correlation_plot/ENCFF611IXQENCFF578AYF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB966XCI michael-snyder:L-2791 "ENCFF578AYF,ENCFF611IXQ" HiSeq 4000 2016-09-16T03:25:45.096759+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyvBj03696Pxzk584jfj5x ENCSR279IEM https://www.encodeproject.org/experiments/ENCSR279IEM transcription factor SIX4-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF920NRF https://www.encodeproject.org/files/ENCFF920NRF/@@download/ENCFF920NRF.bam ENCFF275NIA https://www.encodeproject.org/files/ENCFF275NIA/@@download/ENCFF275NIA.bam 83.3 M 0 80.1 M 0.961 PE 100 100 native 33.3 M 0.0 M 31.4 M 0.755 0.94 0.94 17.28 250 1.05 3.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ecad495-ee28-47d7-9189-b9664095c449/@@download/cross_correlation_plot/ENCFF759CFOENCFF498ERZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB056CCS michael-snyder:L-3008 "ENCFF759CFO,ENCFF498ERZ" HiSeq 4000 2016-09-16T03:20:24.880302+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyvKQ0369GZQjPPJb6P0jf ENCSR487ASM https://www.encodeproject.org/experiments/ENCSR487ASM transcription factor SMARCA5-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF387SQL https://www.encodeproject.org/files/ENCFF387SQL/@@download/ENCFF387SQL.bam ENCFF476SLO https://www.encodeproject.org/files/ENCFF476SLO/@@download/ENCFF476SLO.bam 81.7 M 0 79.7 M 0.976 PE 100 100 native 34.5 M 0.0 M 31.9 M 0.781 0.92 0.92 12.79 140 1.07 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d5572dc-9d50-475c-b017-1f13f41d21d3/@@download/cross_correlation_plot/ENCFF316YEKENCFF512ION.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB091XAR michael-snyder:L-3494 "ENCFF512ION,ENCFF316YEK" HiSeq 4000 2017-06-06T18:18:39.425334+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Vj80369BkKBG9095vy1b ENCSR487ASM https://www.encodeproject.org/experiments/ENCSR487ASM transcription factor SMARCA5-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF800LNC https://www.encodeproject.org/files/ENCFF800LNC/@@download/ENCFF800LNC.bam ENCFF458MYQ https://www.encodeproject.org/files/ENCFF458MYQ/@@download/ENCFF458MYQ.bam 91.5 M 0 87.6 M 0.957 PE 100 100 native 37.3 M 0.0 M 33.9 M 0.742 0.91 0.91 10.73 135 1.07 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/08bc5c0b-2a4b-43fe-b797-db6e09f45547/@@download/cross_correlation_plot/ENCFF509CBVENCFF399MEA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB835DDD michael-snyder:L-3495 "ENCFF399MEA,ENCFF509CBV" HiSeq 4000 2017-06-06T18:19:27.930481+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4q3Vp80369479pZ90bg9V0X ENCSR431TLD https://www.encodeproject.org/experiments/ENCSR431TLD transcription factor SMARCE1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF983CUE https://www.encodeproject.org/files/ENCFF983CUE/@@download/ENCFF983CUE.bam ENCFF477QAO https://www.encodeproject.org/files/ENCFF477QAO/@@download/ENCFF477QAO.bam 107.1 M 0 81.0 M 0.756 PE 100 100 native 33.4 M 0.0 M 23.8 M 0.445 0.71 0.71 3.27 130 1.11 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/a963416f-d229-40c5-8c74-f8df48dabb3a/@@download/cross_correlation_plot/ENCFF609XEGENCFF047GWH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB801SHR michael-snyder:L-3519 "ENCFF609XEG,ENCFF047GWH" HiSeq 4000 2017-06-23T02:11:14.256703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560YfQ0369Bx4kZ6Y9vzGVp ENCSR431TLD https://www.encodeproject.org/experiments/ENCSR431TLD transcription factor SMARCE1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF119JZC https://www.encodeproject.org/files/ENCFF119JZC/@@download/ENCFF119JZC.bam ENCFF912HMV https://www.encodeproject.org/files/ENCFF912HMV/@@download/ENCFF912HMV.bam 104.8 M 0 93.3 M 0.890 PE 100 100 native 40.1 M 0.0 M 25.9 M 0.495 0.65 0.63 2.56 155 1.10 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fa29b07-7905-472b-aed0-9c4213bce491/@@download/cross_correlation_plot/ENCFF734WRAENCFF600VBR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB707EET michael-snyder:L-3520 "ENCFF734WRA,ENCFF600VBR" HiSeq 4000 2017-06-23T02:19:01.906226+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Yp00369FxjJB131Zqf4v ENCSR042TWZ https://www.encodeproject.org/experiments/ENCSR042TWZ "RNA binding protein,transcription factor" SNIP1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF322EWP https://www.encodeproject.org/files/ENCFF322EWP/@@download/ENCFF322EWP.bam ENCFF515MJS https://www.encodeproject.org/files/ENCFF515MJS/@@download/ENCFF515MJS.bam 71.3 M 0 49.4 M 0.692 PE 100 100 native 20.9 M 0.0 M 14.1 M 0.397 0.68 0.67 2.94 225 1.12 4.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/6baaae54-7266-4c5c-9c93-a5794ea7474c/@@download/cross_correlation_plot/ENCFF801JGPENCFF671RFK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB091BWC michael-snyder:L-2722 "ENCFF671RFK,ENCFF801JGP" HiSeq 4000 2016-09-16T03:18:24.790402+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyp8Q036903vFQkJzV6Pq3 ENCSR042TWZ https://www.encodeproject.org/experiments/ENCSR042TWZ "RNA binding protein,transcription factor" SNIP1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF942GSX https://www.encodeproject.org/files/ENCFF942GSX/@@download/ENCFF942GSX.bam ENCFF186TEA https://www.encodeproject.org/files/ENCFF186TEA/@@download/ENCFF186TEA.bam 93.4 M 0 81.3 M 0.870 PE 100 100 native 34.7 M 0.0 M 29.3 M 0.628 0.85 0.84 6.26 230 1.06 3.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/2acba4b1-2af4-4123-bdda-a0b3ad2541ff/@@download/cross_correlation_plot/ENCFF418JIMENCFF088PAW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB844GWF michael-snyder:L-2723 "ENCFF088PAW,ENCFF418JIM" HiSeq 4000 2016-09-16T03:20:34.812879+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypF803690qG5Zzk84B8Yf ENCSR729LGA https://www.encodeproject.org/experiments/ENCSR729LGA transcription factor SP1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF924HNJ https://www.encodeproject.org/files/ENCFF924HNJ/@@download/ENCFF924HNJ.bam ENCFF069JDL https://www.encodeproject.org/files/ENCFF069JDL/@@download/ENCFF069JDL.bam 61.0 M 0 59.5 M 0.976 PE 100 100 native 25.9 M 0.0 M 24.5 M 0.805 0.95 0.95 19.24 210 1.06 4.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1d74a56-fbff-45e7-b4e2-e62d55bbee26/@@download/cross_correlation_plot/ENCFF957SQSENCFF582IOZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB637LZP michael-snyder:L-1714 "ENCFF957SQS,ENCFF582IOZ" HiSeq 2000 2016-10-09T17:10:55.568777+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pK80jv1vY92b0GYjVFXb ENCSR729LGA https://www.encodeproject.org/experiments/ENCSR729LGA transcription factor SP1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF063JBE https://www.encodeproject.org/files/ENCFF063JBE/@@download/ENCFF063JBE.bam ENCFF702CUS https://www.encodeproject.org/files/ENCFF702CUS/@@download/ENCFF702CUS.bam 60.0 M 0 58.6 M 0.976 PE 100 100 native 25.2 M 0.0 M 23.9 M 0.796 0.95 0.95 18.65 220 1.06 4.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/c53b9def-26ba-448e-b36a-f00b37673677/@@download/cross_correlation_plot/ENCFF330MCZENCFF293YFE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB568IYX michael-snyder:L-1715 "ENCFF293YFE,ENCFF330MCZ" HiSeq 2000 2016-10-09T17:10:24.127621+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pQ00jv1xPyfX78Yz4gVZ ENCSR197DJH https://www.encodeproject.org/experiments/ENCSR197DJH transcription factor SREBF1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF774XPS https://www.encodeproject.org/files/ENCFF774XPS/@@download/ENCFF774XPS.bam ENCFF302QWW https://www.encodeproject.org/files/ENCFF302QWW/@@download/ENCFF302QWW.bam 67.3 M 0 66.6 M 0.990 PE 100 100 native 29.9 M 0.0 M 26.8 M 0.798 0.90 0.90 9.46 245 1.07 7.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bc5fae8-6e49-4d6e-b060-bda9dadb9b5f/@@download/cross_correlation_plot/ENCFF424HPQENCFF217JJM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB496FAI michael-snyder:L-374 "ENCFF217JJM,ENCFF424HPQ" HiSeq 2000 2016-10-09T17:10:50.205866+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3p6Q0jv1QxJBfj5Zb2pJP ENCSR197DJH https://www.encodeproject.org/experiments/ENCSR197DJH transcription factor SREBF1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF008QCI https://www.encodeproject.org/files/ENCFF008QCI/@@download/ENCFF008QCI.bam ENCFF117PKO https://www.encodeproject.org/files/ENCFF117PKO/@@download/ENCFF117PKO.bam 97.2 M 0 95.8 M 0.985 PE 100 100 native 42.9 M 0.0 M 38.7 M 0.796 0.90 0.90 10.13 215 1.06 4.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bdf9d39-eff6-42dd-969a-1ee5d5f60eb9/@@download/cross_correlation_plot/ENCFF829LELENCFF168ZLV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB133NHZ michael-snyder:L-378 "ENCFF168ZLV,ENCFF829LEL" HiSeq 2000 2016-10-09T17:14:29.066303+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3p800jv1XvFGkBjjfjPzv ENCSR757EMK https://www.encodeproject.org/experiments/ENCSR757EMK "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF215SUP https://www.encodeproject.org/files/ENCFF215SUP/@@download/ENCFF215SUP.bam ENCFF438QZX https://www.encodeproject.org/files/ENCFF438QZX/@@download/ENCFF438QZX.bam 84.6 M 0 82.1 M 0.970 PE 100 100 native 35.2 M 0.0 M 33.8 M 0.798 0.96 0.96 24.80 195 1.11 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae0e51b9-55c2-48e0-8a1c-6bef0ba79f92/@@download/cross_correlation_plot/ENCFF833EZXENCFF161HBP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB552ACZ michael-snyder:L-1704 "ENCFF161HBP,ENCFF833EZX" HiSeq 2000 2017-05-05T11:49:01.628095+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvV803698KGf370q972jp ENCSR757EMK https://www.encodeproject.org/experiments/ENCSR757EMK "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF661TCZ https://www.encodeproject.org/files/ENCFF661TCZ/@@download/ENCFF661TCZ.bam ENCFF176PAY https://www.encodeproject.org/files/ENCFF176PAY/@@download/ENCFF176PAY.bam 73.8 M 0 71.8 M 0.974 PE 100 100 native 30.7 M 0.0 M 29.8 M 0.809 0.97 0.97 34.26 205 1.07 3.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/312ad034-4556-48e3-b5af-2b9e84741d72/@@download/cross_correlation_plot/ENCFF776KZUENCFF119KHM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB872TQR michael-snyder:L-1705 "ENCFF776KZU,ENCFF119KHM" HiSeq 2000 2017-05-05T10:48:27.826699+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F45yvb00369JxZVj70Jj06G2 ENCSR801SWX https://www.encodeproject.org/experiments/ENCSR801SWX "RNA binding protein,transcription factor" TARDBP-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF401VIW https://www.encodeproject.org/files/ENCFF401VIW/@@download/ENCFF401VIW.bam ENCFF986CIE https://www.encodeproject.org/files/ENCFF986CIE/@@download/ENCFF986CIE.bam 64.9 M 0 58.7 M 0.905 PE 100 100 native 25.3 M 0.0 M 24.2 M 0.748 0.96 0.96 23.86 215 1.06 3.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ffa3e33-50a0-406e-b16d-be4c69fb0c9a/@@download/cross_correlation_plot/ENCFF608KPIENCFF247EXO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB525YCO michael-snyder:L-2742 "ENCFF247EXO,ENCFF608KPI" HiSeq 2000 2017-01-31T17:44:52.936271+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2802G0036916Fvj5gQ7X6ZQ ENCSR801SWX https://www.encodeproject.org/experiments/ENCSR801SWX "RNA binding protein,transcription factor" TARDBP-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF369JAU https://www.encodeproject.org/files/ENCFF369JAU/@@download/ENCFF369JAU.bam ENCFF550GMK https://www.encodeproject.org/files/ENCFF550GMK/@@download/ENCFF550GMK.bam 63.5 M 0 55.0 M 0.866 PE 100 100 native 23.7 M 0.0 M 22.2 M 0.699 0.94 0.94 15.72 200 1.09 2.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/1afe559f-4d9f-4a20-8ac2-f4be911f4ce7/@@download/cross_correlation_plot/ENCFF651TLLENCFF598JRF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285IQF michael-snyder:L-2743 "ENCFF651TLL,ENCFF598JRF" HiSeq 2000 2017-01-31T17:44:20.574598+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2802XQ0369654jBFY5X6zZz ENCSR810WXH https://www.encodeproject.org/experiments/ENCSR810WXH RNA binding protein TOE1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF469VIO https://www.encodeproject.org/files/ENCFF469VIO/@@download/ENCFF469VIO.bam ENCFF524GMH https://www.encodeproject.org/files/ENCFF524GMH/@@download/ENCFF524GMH.bam 91.8 M 0 85.0 M 0.926 PE 100 100 native 37.0 M 0.0 M 28.2 M 0.613 0.76 0.76 3.97 170 1.13 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8187ea0-0afe-492a-bc84-6b5518f37597/@@download/cross_correlation_plot/ENCFF090VYSENCFF615TCI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB113WLR michael-snyder:L-3521 "ENCFF615TCI,ENCFF090VYS" HiSeq 4000 2017-06-23T02:13:33.574898+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Yy003690pK5y12gF63pj ENCSR810WXH https://www.encodeproject.org/experiments/ENCSR810WXH RNA binding protein TOE1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF369YRT https://www.encodeproject.org/files/ENCFF369YRT/@@download/ENCFF369YRT.bam ENCFF248JTU https://www.encodeproject.org/files/ENCFF248JTU/@@download/ENCFF248JTU.bam 99.7 M 0 95.7 M 0.960 PE 100 100 native 42.0 M 0.0 M 31.0 M 0.621 0.74 0.73 3.55 180 1.15 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/21a09c78-a4b4-4a90-881f-ff09ea8309c5/@@download/cross_correlation_plot/ENCFF300ZSDENCFF361XMH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB804MJB michael-snyder:L-3522 "ENCFF361XMH,ENCFF300ZSD" HiSeq 4000 2017-06-23T02:45:16.544401+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Z18036926gYv12YX8qZ6 ENCSR864KNH https://www.encodeproject.org/experiments/ENCSR864KNH "RNA binding protein,transcription factor" YBX1-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF864YTK https://www.encodeproject.org/files/ENCFF864YTK/@@download/ENCFF864YTK.bam ENCFF177PYK https://www.encodeproject.org/files/ENCFF177PYK/@@download/ENCFF177PYK.bam 129.1 M 0 118.3 M 0.917 PE 100 100 native 49.7 M 0.0 M 46.3 M 0.718 0.93 0.93 14.82 220 1.04 2.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/740ccdb1-e40c-4af4-993c-14447b6b5e15/@@download/cross_correlation_plot/ENCFF590KVSENCFF447OXS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB933MVO michael-snyder:L-2746 "ENCFF447OXS,ENCFF590KVS" HiSeq 4000 2016-09-16T03:23:56.083214+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypvj03696Pxzk584jfj50 ENCSR864KNH https://www.encodeproject.org/experiments/ENCSR864KNH "RNA binding protein,transcription factor" YBX1-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF931LRP https://www.encodeproject.org/files/ENCFF931LRP/@@download/ENCFF931LRP.bam ENCFF874VDD https://www.encodeproject.org/files/ENCFF874VDD/@@download/ENCFF874VDD.bam 119.5 M 0 109.8 M 0.919 PE 100 100 native 46.3 M 0.0 M 43.5 M 0.728 0.94 0.94 16.21 220 1.04 2.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a8dcaa1-acb0-4b4b-acd2-43fd8d6a5c13/@@download/cross_correlation_plot/ENCFF577YSBENCFF562IQT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB127POU michael-snyder:L-2747 "ENCFF577YSB,ENCFF562IQT" HiSeq 4000 2016-09-16T03:23:00.923801+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGypzj036954vKPp0b3gGV3 ENCSR231YFE https://www.encodeproject.org/experiments/ENCSR231YFE transcription factor ZBTB33-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF696RXB https://www.encodeproject.org/files/ENCFF696RXB/@@download/ENCFF696RXB.bam ENCFF093IGV https://www.encodeproject.org/files/ENCFF093IGV/@@download/ENCFF093IGV.bam 53.6 M 0 51.7 M 0.964 PE 100 100 native 21.4 M 0.0 M 20.8 M 0.778 0.97 0.97 36.47 190 1.08 4.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a4045cf-ab73-4b0a-8b19-43912ae053c2/@@download/cross_correlation_plot/ENCFF279UPHENCFF031HGS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB020AHW michael-snyder:L-3028 "ENCFF279UPH,ENCFF031HGS" HiSeq 2000 2016-10-27T22:30:39.506025+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bf6Q0369BX1xqb1B80vQG ENCSR231YFE https://www.encodeproject.org/experiments/ENCSR231YFE transcription factor ZBTB33-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF455ZKM https://www.encodeproject.org/files/ENCFF455ZKM/@@download/ENCFF455ZKM.bam ENCFF426VJL https://www.encodeproject.org/files/ENCFF426VJL/@@download/ENCFF426VJL.bam 90.8 M 0 87.3 M 0.961 PE 100 100 native 36.1 M 0.0 M 34.3 M 0.754 0.95 0.95 19.75 180 1.06 2.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/9875e233-5fb3-4040-a470-231954aa90b5/@@download/cross_correlation_plot/ENCFF748NXLENCFF030BFQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB455BDY michael-snyder:L-3029 "ENCFF748NXL,ENCFF030BFQ" HiSeq 2000 2016-10-27T22:34:53.060919+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bfB00369PQyG3V5B4502V ENCSR318LVG https://www.encodeproject.org/experiments/ENCSR318LVG transcription factor ZBTB40-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF288EDV https://www.encodeproject.org/files/ENCFF288EDV/@@download/ENCFF288EDV.bam ENCFF039HTJ https://www.encodeproject.org/files/ENCFF039HTJ/@@download/ENCFF039HTJ.bam 103.0 M 0 99.0 M 0.962 PE 100 100 native 42.0 M 0.0 M 37.9 M 0.735 0.90 0.90 9.87 255 1.35 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6e2d447-b5eb-4026-ae2f-0048b18acd21/@@download/cross_correlation_plot/ENCFF969VJBENCFF971IAU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB345ZOV michael-snyder:L-1902 "ENCFF969VJB,ENCFF971IAU" HiSeq 4000 2016-09-16T03:22:19.121115+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyb680369JzPBF2JXk4PQ7 ENCSR318LVG https://www.encodeproject.org/experiments/ENCSR318LVG transcription factor ZBTB40-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF673NIW https://www.encodeproject.org/files/ENCFF673NIW/@@download/ENCFF673NIW.bam ENCFF814PBC https://www.encodeproject.org/files/ENCFF814PBC/@@download/ENCFF814PBC.bam 125.0 M 0 120.4 M 0.964 PE 100 100 native 51.2 M 0.0 M 45.8 M 0.732 0.89 0.89 9.17 240 1.17 2.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/623ce5ce-ec2e-4fcd-9834-4f774d42f803/@@download/cross_correlation_plot/ENCFF094OAYENCFF788CVF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB170DGQ michael-snyder:L-1903 "ENCFF094OAY,ENCFF788CVF" HiSeq 4000 2016-09-16T03:24:31.072049+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGyb900369B06vx3GQPgx7P ENCSR277BXW https://www.encodeproject.org/experiments/ENCSR277BXW transcription factor ZBTB7B-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF338ZSU https://www.encodeproject.org/files/ENCFF338ZSU/@@download/ENCFF338ZSU.bam ENCFF934IMS https://www.encodeproject.org/files/ENCFF934IMS/@@download/ENCFF934IMS.bam 60.4 M 0 59.0 M 0.976 PE 100 100 native 25.6 M 0.0 M 25.1 M 0.833 0.98 0.98 54.46 235 1.05 3.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/3753678e-5d2a-4dec-bd59-15e0df233771/@@download/cross_correlation_plot/ENCFF605PXJENCFF815CWB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB310LPG michael-snyder:L-1876 "ENCFF605PXJ,ENCFF815CWB" HiSeq 2000 2016-10-09T17:31:31.916095+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64PQ0jv1q5825v91XY30v ENCSR277BXW https://www.encodeproject.org/experiments/ENCSR277BXW transcription factor ZBTB7B-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF962EFL https://www.encodeproject.org/files/ENCFF962EFL/@@download/ENCFF962EFL.bam ENCFF896ZIV https://www.encodeproject.org/files/ENCFF896ZIV/@@download/ENCFF896ZIV.bam 63.6 M 0 62.1 M 0.976 PE 100 100 native 27.0 M 0.0 M 26.0 M 0.817 0.96 0.96 28.01 225 1.06 3.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc40d83e-0da8-4172-8331-433d9c0f23db/@@download/cross_correlation_plot/ENCFF662WYCENCFF527JAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB425YMK michael-snyder:L-1877 "ENCFF662WYC,ENCFF527JAY" HiSeq 2000 2016-10-09T17:31:15.495261+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64Vj0jv1Y68V4KG8yz38b ENCSR435OQD https://www.encodeproject.org/experiments/ENCSR435OQD transcription factor ZFX-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF975MPZ https://www.encodeproject.org/files/ENCFF975MPZ/@@download/ENCFF975MPZ.bam ENCFF328JLG https://www.encodeproject.org/files/ENCFF328JLG/@@download/ENCFF328JLG.bam 135.7 M 0 132.3 M 0.975 PE 100 100 native 56.0 M 0.0 M 53.6 M 0.789 0.96 0.96 22.87 280 1.07 2.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6d16758-fcd2-484a-ad50-179e97a11019/@@download/cross_correlation_plot/ENCFF803FBHENCFF935CXJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB830EDJ michael-snyder:L-2691 "ENCFF935CXJ,ENCFF803FBH" HiSeq 2000 2017-03-23T18:22:08.334843+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QBBj0369864P9PK7v9G8F ENCSR435OQD https://www.encodeproject.org/experiments/ENCSR435OQD transcription factor ZFX-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF357KDK https://www.encodeproject.org/files/ENCFF357KDK/@@download/ENCFF357KDK.bam ENCFF240MZI https://www.encodeproject.org/files/ENCFF240MZI/@@download/ENCFF240MZI.bam 121.2 M 0 118.4 M 0.977 PE 100 100 native 49.5 M 0.0 M 47.1 M 0.777 0.95 0.95 20.55 325 1.18 2.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/498653d3-8409-455c-b9b6-f830251259b0/@@download/cross_correlation_plot/ENCFF857WNFENCFF855KRX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB914ZWE michael-snyder:L-3092 "ENCFF855KRX,ENCFF857WNF" HiSeq 2000 2017-03-23T18:20:10.620254+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QBf00369B0FK23GVp4K7b ENCSR449UFF https://www.encodeproject.org/experiments/ENCSR449UFF transcription factor ZKSCAN1-human MCF-7 immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF442WFR https://www.encodeproject.org/files/ENCFF442WFR/@@download/ENCFF442WFR.bam ENCFF571UYJ https://www.encodeproject.org/files/ENCFF571UYJ/@@download/ENCFF571UYJ.bam 52.5 M 0 50.9 M 0.970 PE 100 100 native 21.9 M 0.0 M 21.6 M 0.823 0.99 0.99 86.65 200 1.07 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/d666edb0-4594-445f-961e-3b9edf80697b/@@download/cross_correlation_plot/ENCFF019YFWENCFF904VSC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB393KRV michael-snyder:L-1780 "ENCFF904VSC,ENCFF019YFW" HiSeq 2000 2016-10-09T17:03:26.099883+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BY00jv1zBYbxYJ5zzzK3 ENCSR449UFF https://www.encodeproject.org/experiments/ENCSR449UFF transcription factor ZKSCAN1-human MCF-7 immortalized cell line 4 michael-snyder ENCODE3 GRCh38 ENCFF023VUT https://www.encodeproject.org/files/ENCFF023VUT/@@download/ENCFF023VUT.bam ENCFF346ZCU https://www.encodeproject.org/files/ENCFF346ZCU/@@download/ENCFF346ZCU.bam 67.4 M 0 65.6 M 0.973 PE 100 100 native 28.2 M 0.0 M 27.9 M 0.827 0.99 0.99 96.63 185 1.07 3.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c3fa3c0-1bb9-476b-b509-78b526fb102b/@@download/cross_correlation_plot/ENCFF133BYLENCFF173ENM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB834TZE michael-snyder:L-1781 "ENCFF173ENM,ENCFF133BYL" HiSeq 2000 2016-10-09T17:04:04.117691+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BZQ0jv1xPyfX78Yz4j5f ENCSR096KWU https://www.encodeproject.org/experiments/ENCSR096KWU transcription factor ZNF207-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF796TBS https://www.encodeproject.org/files/ENCFF796TBS/@@download/ENCFF796TBS.bam ENCFF844SGC https://www.encodeproject.org/files/ENCFF844SGC/@@download/ENCFF844SGC.bam 55.4 M 0 53.6 M 0.967 PE 100 100 native 23.1 M 0.0 M 22.7 M 0.819 0.98 0.98 65.29 195 1.07 2.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/c339f8bf-df58-4025-8954-e6ba5052af6f/@@download/cross_correlation_plot/ENCFF233LBLENCFF724EXA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB364HTU michael-snyder:L-1782 "ENCFF233LBL,ENCFF724EXA" HiSeq 2000 2016-10-09T17:36:54.804852+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5xzQ0jv1Y68V4KG8yz380 ENCSR096KWU https://www.encodeproject.org/experiments/ENCSR096KWU transcription factor ZNF207-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF116HSG https://www.encodeproject.org/files/ENCFF116HSG/@@download/ENCFF116HSG.bam ENCFF866FUF https://www.encodeproject.org/files/ENCFF866FUF/@@download/ENCFF866FUF.bam 57.9 M 0 56.7 M 0.978 PE 100 100 native 24.5 M 0.0 M 24.3 M 0.840 0.99 0.99 135.27 210 1.06 3.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/88bb9f15-d099-415f-9293-d957da02b480/@@download/cross_correlation_plot/ENCFF563WERENCFF371HTE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB512EHJ michael-snyder:L-1783 "ENCFF371HTE,ENCFF563WER" HiSeq 2000 2016-10-09T17:37:05.533127+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5y1j0jv1X056bqGfgGfb8 ENCSR465XQW https://www.encodeproject.org/experiments/ENCSR465XQW transcription factor ZNF217-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF199VCV https://www.encodeproject.org/files/ENCFF199VCV/@@download/ENCFF199VCV.bam ENCFF588LHY https://www.encodeproject.org/files/ENCFF588LHY/@@download/ENCFF588LHY.bam 99.9 M 0 76.5 M 0.766 PE 100 100 native 31.8 M 0.0 M 25.4 M 0.509 0.80 0.80 4.91 255 1.13 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/d48cb8d9-1948-4d60-8dbb-ec253bd99ddc/@@download/cross_correlation_plot/ENCFF601NIYENCFF888GKN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB723ZDU michael-snyder:L-2255 "ENCFF888GKN,ENCFF601NIY" HiSeq 4000 2016-09-16T03:15:50.732022+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz16Q036994Jx4PVBXKY3b ENCSR465XQW https://www.encodeproject.org/experiments/ENCSR465XQW transcription factor ZNF217-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF759ASI https://www.encodeproject.org/files/ENCFF759ASI/@@download/ENCFF759ASI.bam ENCFF715SDB https://www.encodeproject.org/files/ENCFF715SDB/@@download/ENCFF715SDB.bam 136.4 M 0 103.1 M 0.756 PE 100 100 native 43.4 M 0.0 M 34.4 M 0.504 0.79 0.79 4.73 230 1.14 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/61592627-cccb-4648-a360-c9316d120e8f/@@download/cross_correlation_plot/ENCFF263XLBENCFF064VKS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB704GUZ michael-snyder:L-2248 "ENCFF263XLB,ENCFF064VKS" HiSeq 4000 2016-09-16T03:19:38.655596+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzGz1980369Fv9Fbyj2z3Q90 ENCSR912ATU https://www.encodeproject.org/experiments/ENCSR912ATU transcription factor ZNF217-human MCF-7 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR503VTG https://www.encodeproject.org/experiments/ENCSR503VTG transcription factor ZNF24-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF639VBS https://www.encodeproject.org/files/ENCFF639VBS/@@download/ENCFF639VBS.bam ENCFF595KXD https://www.encodeproject.org/files/ENCFF595KXD/@@download/ENCFF595KXD.bam 80.7 M 0 78.5 M 0.973 PE 100 100 native 33.9 M 0.0 M 26.3 M 0.651 0.77 0.77 4.26 195 1.09 3.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b2f2317-d4e8-4a9b-ac85-e88aa8138560/@@download/cross_correlation_plot/ENCFF278ZXIENCFF280IXK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB748LRN michael-snyder:L-3523 "ENCFF280IXK,ENCFF278ZXI" HiSeq 4000 2017-06-23T01:31:00.406981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Z58036926gYv12YX8qZZ ENCSR503VTG https://www.encodeproject.org/experiments/ENCSR503VTG transcription factor ZNF24-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF618WHB https://www.encodeproject.org/files/ENCFF618WHB/@@download/ENCFF618WHB.bam ENCFF065WCR https://www.encodeproject.org/files/ENCFF065WCR/@@download/ENCFF065WCR.bam 77.4 M 0 72.3 M 0.934 PE 100 100 native 31.2 M 0.0 M 24.8 M 0.642 0.80 0.79 4.73 165 1.13 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/44d9e636-d695-4ccb-885b-5d69cb4526af/@@download/cross_correlation_plot/ENCFF037HQZENCFF720YIW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB321RWL michael-snyder:L-3524 "ENCFF720YIW,ENCFF037HQZ" HiSeq 4000 2017-06-23T01:26:20.470102+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F560Z8Q03693K5yx0Yf7v9vZ ENCSR018MQH https://www.encodeproject.org/experiments/ENCSR018MQH transcription factor ZNF579-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF117CDU https://www.encodeproject.org/files/ENCFF117CDU/@@download/ENCFF117CDU.bam ENCFF682TFP https://www.encodeproject.org/files/ENCFF682TFP/@@download/ENCFF682TFP.bam 94.8 M 0 90.6 M 0.956 PE 100 100 native 38.5 M 0.0 M 30.7 M 0.648 0.80 0.80 4.91 240 1.05 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ba51a6e-25cc-4493-9a2c-974fa8f22e5f/@@download/cross_correlation_plot/ENCFF950ZQEENCFF645XNK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB608TWG michael-snyder:L-2251 "ENCFF645XNK,ENCFF950ZQE" HiSeq 4000 2016-10-27T22:32:48.070299+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bQF80369GJ6xQfbB7F5kB ENCSR018MQH https://www.encodeproject.org/experiments/ENCSR018MQH transcription factor ZNF579-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF916MHZ https://www.encodeproject.org/files/ENCFF916MHZ/@@download/ENCFF916MHZ.bam ENCFF373GHL https://www.encodeproject.org/files/ENCFF373GHL/@@download/ENCFF373GHL.bam 148.9 M 0 110.7 M 0.743 PE 100 100 native 47.0 M 0.0 M 37.3 M 0.501 0.79 0.79 4.65 250 1.06 2.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/d42ce179-3636-4d92-84c2-1fbc0233b045/@@download/cross_correlation_plot/ENCFF970ANDENCFF359DZE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB630TJT michael-snyder:L-2252 "ENCFF359DZE,ENCFF970AND" HiSeq 4000 2016-10-27T22:38:55.148049+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bQVj03694q32PPxBJ6ZvJ ENCSR028NUR https://www.encodeproject.org/experiments/ENCSR028NUR transcription factor ZNF592-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF521YRB https://www.encodeproject.org/files/ENCFF521YRB/@@download/ENCFF521YRB.bam ENCFF033ITL https://www.encodeproject.org/files/ENCFF033ITL/@@download/ENCFF033ITL.bam 43.9 M 0 42.9 M 0.976 PE 100 100 native 18.9 M 0.0 M 17.9 M 0.818 0.95 0.95 19.50 230 1.09 6.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/fde5aa22-e18f-492f-8f9e-33e023a7a13f/@@download/cross_correlation_plot/ENCFF308IIPENCFF724LAL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB375OHG michael-snyder:L-1859 "ENCFF724LAL,ENCFF308IIP" HiSeq 2000 2016-10-09T17:34:21.576642+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62q80jv1fXGPZpVVpjYQ7 ENCSR028NUR https://www.encodeproject.org/experiments/ENCSR028NUR transcription factor ZNF592-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF014OEB https://www.encodeproject.org/files/ENCFF014OEB/@@download/ENCFF014OEB.bam ENCFF998NFM https://www.encodeproject.org/files/ENCFF998NFM/@@download/ENCFF998NFM.bam 43.2 M 0 41.6 M 0.963 PE 100 100 native 18.2 M 0.0 M 17.2 M 0.798 0.95 0.95 19.73 240 1.07 5.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba047d2b-9f9d-4b27-bac9-30615eaae8c3/@@download/cross_correlation_plot/ENCFF460NQXENCFF085YNE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB882HUK michael-snyder:L-1860 "ENCFF085YNE,ENCFF460NQX" HiSeq 2000 2016-10-09T17:32:05.660906+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62x80jv1jG2Qk7JXpxvYf ENCSR701AQS https://www.encodeproject.org/experiments/ENCSR701AQS transcription factor ZNF592-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF745LPJ https://www.encodeproject.org/files/ENCFF745LPJ/@@download/ENCFF745LPJ.bam ENCFF302LHZ https://www.encodeproject.org/files/ENCFF302LHZ/@@download/ENCFF302LHZ.bam 58.8 M 0 57.3 M 0.975 PE 100 100 native 24.9 M 0.0 M 23.9 M 0.811 0.96 0.96 24.71 220 1.06 4.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/6be7a152-c98a-4340-b76b-0762817104eb/@@download/cross_correlation_plot/ENCFF264ZQHENCFF998JJX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB257LYY michael-snyder:L-1832 "ENCFF264ZQH,ENCFF998JJX" HiSeq 2000 2016-10-09T17:08:38.782435+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4JgQ0jv1XvFGkBjjfjQbg ENCSR701AQS https://www.encodeproject.org/experiments/ENCSR701AQS transcription factor ZNF592-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF037WYA https://www.encodeproject.org/files/ENCFF037WYA/@@download/ENCFF037WYA.bam ENCFF862RZJ https://www.encodeproject.org/files/ENCFF862RZJ/@@download/ENCFF862RZJ.bam 52.5 M 0 50.9 M 0.968 PE 100 100 native 22.1 M 0.0 M 20.3 M 0.773 0.92 0.92 11.94 220 1.07 3.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee1e74ad-5457-498d-bb18-fc5f83821242/@@download/cross_correlation_plot/ENCFF630BDUENCFF847AWQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB358DLC michael-snyder:L-1833 "ENCFF630BDU,ENCFF847AWQ" HiSeq 2000 2016-10-09T17:07:33.031894+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Jk80jv1xPyfX78Yz4j8P ENCSR733COW https://www.encodeproject.org/experiments/ENCSR733COW transcription factor ZNF687-human MCF-7 immortalized cell line michael-snyder ENCODE3 pending PE 100 HiSeq 2000 requires lab review ENCSR899BKM https://www.encodeproject.org/experiments/ENCSR899BKM transcription factor ZNF687-human MCF-7 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF409PPI https://www.encodeproject.org/files/ENCFF409PPI/@@download/ENCFF409PPI.bam ENCFF053LCK https://www.encodeproject.org/files/ENCFF053LCK/@@download/ENCFF053LCK.bam 65.6 M 0 63.9 M 0.975 PE 100 100 native 27.7 M 0.0 M 27.2 M 0.828 0.98 0.98 52.87 215 1.08 2.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/73ad88fe-1b5a-465d-9554-88501a9cc439/@@download/cross_correlation_plot/ENCFF764PRLENCFF317PWU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB669OLV michael-snyder:L-2645 "ENCFF317PWU,ENCFF764PRL" HiSeq 2000 2016-10-09T17:04:42.396927+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BF80jv1xPyfX78Yz4j5J ENCSR899BKM https://www.encodeproject.org/experiments/ENCSR899BKM transcription factor ZNF687-human MCF-7 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF503QVH https://www.encodeproject.org/files/ENCFF503QVH/@@download/ENCFF503QVH.bam ENCFF528GXO https://www.encodeproject.org/files/ENCFF528GXO/@@download/ENCFF528GXO.bam 60.3 M 0 58.9 M 0.976 PE 100 100 native 25.6 M 0.0 M 25.2 M 0.836 0.99 0.99 67.00 215 1.09 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a6d4b87-d048-424a-a70a-eea65d586177/@@download/cross_correlation_plot/ENCFF543WLXENCFF481RYD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB653XWX michael-snyder:L-2646 "ENCFF481RYD,ENCFF543WLX" HiSeq 2000 2016-10-09T17:04:51.423372+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4BGj0jv1f60PxyZ9JGPBJ ENCSR000EHS https://www.encodeproject.org/experiments/ENCSR000EHS transcription factor MAX-human NB4 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EHR https://www.encodeproject.org/experiments/ENCSR000EHR transcription factor MYC-human NB4 immortalized cell line michael-snyder ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR634PYN https://www.encodeproject.org/experiments/ENCSR634PYN control Control-human neural cell in vitro differentiated cells 1 michael-snyder ENCODE3 GRCh38 ENCFF396QTX https://www.encodeproject.org/files/ENCFF396QTX/@@download/ENCFF396QTX.bam ENCFF332AFO https://www.encodeproject.org/files/ENCFF332AFO/@@download/ENCFF332AFO.bam 119.0 M 0 117.4 M 0.986 PE 100101 100 native 53.2 M 0.0 M 41.3 M 0.694 0.78 0.77 4.26 225 1.04 6.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/712f9530-a9ae-4e5f-a16c-02982b2c4b4f/@@download/cross_correlation_plot/ENCFF110UGI-ENCFF002EFM_pooledENCFF672SZH-ENCFF002EFL_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB890WRV,ENCLB715XOS" michael-snyder:757_B_TruSeq_ATCACG "ENCFF110UGI,ENCFF002EFL,ENCFF672SZH,ENCFF002EFM" HiSeq 2000 2017-03-08T17:53:07.835438+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2zKQ800369K8ZkZ817vz0FX ENCSR634PYN https://www.encodeproject.org/experiments/ENCSR634PYN control Control-human neural cell in vitro differentiated cells 2 michael-snyder ENCODE3 GRCh38 ENCFF056HWK https://www.encodeproject.org/files/ENCFF056HWK/@@download/ENCFF056HWK.bam ENCFF812FPR https://www.encodeproject.org/files/ENCFF812FPR/@@download/ENCFF812FPR.bam 76.0 M 0 75.1 M 0.988 PE 100 100 None 34.2 M 0.0 M 28.5 M 0.749 0.83 0.83 5.57 230 1.07 7.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc143626-a56a-41a0-963e-1f357f734651/@@download/cross_correlation_plot/ENCFF002EFPENCFF002EFR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB002VIC michael-snyder:757_B_TruSeq_CGATGT "ENCFF002EFR,ENCFF002EFP" HiSeq 2000 2016-05-06T18:13:53.977485+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqVXj03691Q4QQpZ2q8BfX ENCSR822CEA https://www.encodeproject.org/experiments/ENCSR822CEA "transcription factor,RNA binding protein" CTCF-human neural cell in vitro differentiated cells 1 michael-snyder ENCODE3 GRCh38 ENCFF265XZZ https://www.encodeproject.org/files/ENCFF265XZZ/@@download/ENCFF265XZZ.bam ENCFF638MHT https://www.encodeproject.org/files/ENCFF638MHT/@@download/ENCFF638MHT.bam 133.1 M 0 120.5 M 0.905 PE 100101 100 native 54.8 M 0.0 M 20.1 M 0.302 0.37 0.46 2.22 245 1.39 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e583a11-2367-4172-82d2-6c6e83ed0e63/@@download/cross_correlation_plot/ENCFF230ANA-ENCFF002EHL_pooledENCFF699KPK-ENCFF002EHM_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB817AFA,ENCLB967LQE" michael-snyder:757_A_TruSeq_ATCACG "ENCFF230ANA,ENCFF002EHM,ENCFF002EHL,ENCFF699KPK" HiSeq 2000 2017-03-03T18:00:18.314766+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKkjj0369J1QQ35qX2QbkJ ENCSR822CEA https://www.encodeproject.org/experiments/ENCSR822CEA "transcription factor,RNA binding protein" CTCF-human neural cell in vitro differentiated cells 2 michael-snyder ENCODE3 GRCh38 ENCFF756RTB https://www.encodeproject.org/files/ENCFF756RTB/@@download/ENCFF756RTB.bam ENCFF823MVP https://www.encodeproject.org/files/ENCFF823MVP/@@download/ENCFF823MVP.bam 78.7 M 0 74.6 M 0.947 PE 100 100 native 34.4 M 0.0 M 25.4 M 0.645 0.74 0.76 4.13 260 3.39 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e33fb0c-87de-4308-b86b-a313f4468bdc/@@download/cross_correlation_plot/ENCFF002EHKENCFF002EHI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB418TXJ michael-snyder:757_A_TruSeq_CGATGT "ENCFF002EHI,ENCFF002EHK" HiSeq 2000 2017-03-03T17:55:55.569256+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKkyj03699b2bq8vfQPZZv ENCSR843ZUP https://www.encodeproject.org/experiments/ENCSR843ZUP transcription factor EP300-human neural cell in vitro differentiated cells 1 michael-snyder ENCODE3 GRCh38 ENCFF034UVX https://www.encodeproject.org/files/ENCFF034UVX/@@download/ENCFF034UVX.bam ENCFF366QZU https://www.encodeproject.org/files/ENCFF366QZU/@@download/ENCFF366QZU.bam 140.4 M 0 130.7 M 0.931 PE 100101 100 native 59.5 M 0.0 M 28.0 M 0.399 0.47 0.70 5.64 195 1.25 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/6755e630-223e-4598-bc92-ecf177ee196a/@@download/cross_correlation_plot/ENCFF236RPE-ENCFF002ELI_pooledENCFF723QGN-ENCFF002ELR_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB606LQR,ENCLB090TSU" michael-snyder:762_A_TruSeq_TTAGGC "ENCFF236RPE,ENCFF002ELI,ENCFF002ELR,ENCFF723QGN" HiSeq 2000 2017-03-03T18:01:48.844481+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKp500369K1Z997FbYJZJq ENCSR843ZUP https://www.encodeproject.org/experiments/ENCSR843ZUP transcription factor EP300-human neural cell in vitro differentiated cells 2 michael-snyder ENCODE3 GRCh38 ENCFF157QUV https://www.encodeproject.org/files/ENCFF157QUV/@@download/ENCFF157QUV.bam ENCFF372ENP https://www.encodeproject.org/files/ENCFF372ENP/@@download/ENCFF372ENP.bam 97.3 M 0 94.1 M 0.968 PE 100 100 native 43.0 M 0.0 M 22.4 M 0.460 0.52 0.50 1.85 225 1.25 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/a42f2f16-06fb-4cfe-abce-df812158c75a/@@download/cross_correlation_plot/ENCFF002ELQENCFF002ELP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB245PWO michael-snyder:762_A_TruSeq_TGACCA "ENCFF002ELP,ENCFF002ELQ" HiSeq 2000 2017-03-03T17:57:44.527044+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKpF00369K1Z997FbYJZK3 ENCSR934NHU https://www.encodeproject.org/experiments/ENCSR934NHU transcription factor MXI1-human neural cell in vitro differentiated cells 1 michael-snyder ENCODE3 GRCh38 ENCFF095KVR https://www.encodeproject.org/files/ENCFF095KVR/@@download/ENCFF095KVR.bam ENCFF498WXH https://www.encodeproject.org/files/ENCFF498WXH/@@download/ENCFF498WXH.bam 128.9 M 0 110.4 M 0.857 PE 100101 100 native 49.6 M 0.0 M 24.2 M 0.376 0.49 0.84 8.31 185 1.15 2.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/19c4d740-f91c-45c0-944e-a1d7aea2ba8a/@@download/cross_correlation_plot/ENCFF201POB-ENCFF002ELG_pooledENCFF722ZLB-ENCFF002ELH_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB650LAA,ENCLB654YJJ" michael-snyder:762_A_TruSeq_ATCACG "ENCFF201POB,ENCFF722ZLB,ENCFF002ELH,ENCFF002ELG" HiSeq 2000 2017-03-03T18:00:27.809456+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKpV80369BqGv28vvQ1YV2 ENCSR934NHU https://www.encodeproject.org/experiments/ENCSR934NHU transcription factor MXI1-human neural cell in vitro differentiated cells 2 michael-snyder ENCODE3 GRCh38 ENCFF260PNL https://www.encodeproject.org/files/ENCFF260PNL/@@download/ENCFF260PNL.bam ENCFF092IFZ https://www.encodeproject.org/files/ENCFF092IFZ/@@download/ENCFF092IFZ.bam 102.7 M 0 98.6 M 0.960 PE 100 100 native 44.8 M 0.0 M 20.3 M 0.395 0.45 0.46 1.73 220 1.28 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/02cfb4bd-2180-4e48-b59a-29b37f68854d/@@download/cross_correlation_plot/ENCFF002ELNENCFF002ELO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB724JFH michael-snyder:762_A_TruSeq_CGATGT "ENCFF002ELN,ENCFF002ELO" HiSeq 2000 2017-03-03T17:58:12.934517+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKpg00369K83bg7xJZ142K ENCSR198ZYJ https://www.encodeproject.org/experiments/ENCSR198ZYJ transcription factor RAD21-human neural cell in vitro differentiated cells 1 michael-snyder ENCODE3 GRCh38 ENCFF988DLZ https://www.encodeproject.org/files/ENCFF988DLZ/@@download/ENCFF988DLZ.bam ENCFF433UHK https://www.encodeproject.org/files/ENCFF433UHK/@@download/ENCFF433UHK.bam 123.0 M 0 118.0 M 0.959 PE 100101 100 native 54.2 M 0.0 M 27.2 M 0.443 0.50 0.71 6.31 190 2.08 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5d28f6d-7a8e-436b-9f82-5fe177e46d55/@@download/cross_correlation_plot/ENCFF617KOF-ENCFF002EHX_pooledENCFF784VKF-ENCFF002EHT_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB175URE,ENCLB092FSB" michael-snyder:762_B_TruSeq_ATCACG "ENCFF617KOF,ENCFF784VKF,ENCFF002EHT,ENCFF002EHX" HiSeq 2000 2017-03-03T18:00:10.170935+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKppj03691B5vB7F87jbzz ENCSR198ZYJ https://www.encodeproject.org/experiments/ENCSR198ZYJ transcription factor RAD21-human neural cell in vitro differentiated cells 2 michael-snyder ENCODE3 GRCh38 ENCFF957CQI https://www.encodeproject.org/files/ENCFF957CQI/@@download/ENCFF957CQI.bam ENCFF178XEH https://www.encodeproject.org/files/ENCFF178XEH/@@download/ENCFF178XEH.bam 103.9 M 0 101.5 M 0.977 PE 100 100 native 46.8 M 0.0 M 30.3 M 0.583 0.65 0.65 2.73 235 1.93 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c4018f5-2cce-410e-97b1-72cd5887935c/@@download/cross_correlation_plot/ENCFF002EHVENCFF002DTV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB038MYD michael-snyder:762_B_TruSeq_CGATGT "ENCFF002DTV,ENCFF002EHV" HiSeq 2000 2017-03-03T17:59:52.124011+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKpxQ03699b2bq8vfQPZbB ENCSR404BPV https://www.encodeproject.org/experiments/ENCSR404BPV transcription factor SMC3-human neural cell in vitro differentiated cells 1 michael-snyder ENCODE3 GRCh38 ENCFF447TQI https://www.encodeproject.org/files/ENCFF447TQI/@@download/ENCFF447TQI.bam ENCFF144KQA https://www.encodeproject.org/files/ENCFF144KQA/@@download/ENCFF144KQA.bam 138.3 M 0 129.5 M 0.937 PE 100101 100 native 59.3 M 0.0 M 29.1 M 0.421 0.49 0.66 5.15 220 1.44 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7812770-340f-4c7f-a929-31d36e0975e3/@@download/cross_correlation_plot/ENCFF456LRP-ENCFF002ELU_pooledENCFF357WIZ-ENCFF002ELT_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB567CMS,ENCLB221JHM" michael-snyder:785_A_TruSeq_ATCACG "ENCFF002ELT,ENCFF002ELU,ENCFF456LRP,ENCFF357WIZ" HiSeq 2000 2017-03-03T18:03:56.679467+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKq180369F2P8v7G7g9P2q ENCSR404BPV https://www.encodeproject.org/experiments/ENCSR404BPV transcription factor SMC3-human neural cell in vitro differentiated cells 2 michael-snyder ENCODE3 GRCh38 ENCFF644WZX https://www.encodeproject.org/files/ENCFF644WZX/@@download/ENCFF644WZX.bam ENCFF577YCP https://www.encodeproject.org/files/ENCFF577YCP/@@download/ENCFF577YCP.bam 85.4 M 0 79.7 M 0.933 PE 100 100 native 36.6 M 0.0 M 24.8 M 0.580 0.68 0.67 2.96 255 1.60 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/303be748-7582-45f5-9d55-4b825fa77bb5/@@download/cross_correlation_plot/ENCFF002ELVENCFF002ELS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB940EZW michael-snyder:785_A_TruSeq_CGATGT "ENCFF002ELS,ENCFF002ELV" HiSeq 2000 2017-03-03T17:55:58.481586+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vKq48036943f8YF9Jx60Jy ENCSR013JVJ https://www.encodeproject.org/experiments/ENCSR013JVJ control Control-human omental fat pad tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF104DRW https://www.encodeproject.org/files/ENCFF104DRW/@@download/ENCFF104DRW.bam ENCFF291DHG https://www.encodeproject.org/files/ENCFF291DHG/@@download/ENCFF291DHG.bam 96.6 M 0 92.3 M 0.955 PE 100 100 native 39.8 M 0.0 M 34.3 M 0.710 0.86 0.86 6.96 150 1.07 4.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/c769cb79-1f61-42d4-80ec-61ef1fb18d9b/@@download/cross_correlation_plot/ENCFF960RVHENCFF291HPC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB197XCD michael-snyder:L-3239 "ENCFF960RVH,ENCFF291HPC" HiSeq 4000 2017-01-27T06:31:01.757337+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253X080369FB2f75bZ9Qz8Q ENCSR117KTL https://www.encodeproject.org/experiments/ENCSR117KTL control Control-human omental fat pad tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF575CYL https://www.encodeproject.org/files/ENCFF575CYL/@@download/ENCFF575CYL.bam ENCFF507FYB https://www.encodeproject.org/files/ENCFF507FYB/@@download/ENCFF507FYB.bam 98.1 M 0 95.5 M 0.973 PE 100 100 native 41.4 M 0.0 M 28.3 M 0.578 0.68 0.68 3.05 180 1.06 8.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/6997916d-fc93-437f-b81f-2d385133418a/@@download/cross_correlation_plot/ENCFF017QNZENCFF689DPJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB787SDI michael-snyder:L-3178 "ENCFF689DPJ,ENCFF017QNZ" HiSeq 4000 2016-12-10T03:42:33.305995+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QjJ003695yqvv8q311GFx ENCSR480WKY https://www.encodeproject.org/experiments/ENCSR480WKY control Control-human omental fat pad tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF576CMR https://www.encodeproject.org/files/ENCFF576CMR/@@download/ENCFF576CMR.bam ENCFF695MWS https://www.encodeproject.org/files/ENCFF695MWS/@@download/ENCFF695MWS.bam 83.5 M 0 74.8 M 0.896 PE 100 100 native 31.0 M 0.0 M 25.8 M 0.618 0.83 0.83 5.99 320 1.01 0.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/817bd168-f41d-4d98-a1ef-d63e2e0bccfd/@@download/cross_correlation_plot/ENCFF449ANDENCFF133DKP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB549ZCY michael-snyder:L-3109 "ENCFF133DKP,ENCFF449AND" HiSeq 4000 2016-10-27T22:19:55.642570+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bq10036923z1QYVBPp837 ENCSR005LPI https://www.encodeproject.org/experiments/ENCSR005LPI "transcription factor,RNA binding protein" CTCF-human omental fat pad tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF185WUG https://www.encodeproject.org/files/ENCFF185WUG/@@download/ENCFF185WUG.bam ENCFF924BFE https://www.encodeproject.org/files/ENCFF924BFE/@@download/ENCFF924BFE.bam 75.6 M 0 73.6 M 0.973 PE 100 100 native 31.4 M 0.0 M 26.4 M 0.699 0.84 0.84 6.00 160 1.07 5.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/2879f139-3a20-419c-aa90-3e1abbafcc46/@@download/cross_correlation_plot/ENCFF547FDGENCFF399FYC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB642LXJ michael-snyder:L-3238 "ENCFF547FDG,ENCFF399FYC" HiSeq 4000 2017-01-27T06:29:51.792258+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253X58036958ZB25bBz7zPg ENCSR089DTY https://www.encodeproject.org/experiments/ENCSR089DTY "transcription factor,RNA binding protein" CTCF-human omental fat pad tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF167NTI https://www.encodeproject.org/files/ENCFF167NTI/@@download/ENCFF167NTI.bam ENCFF112RDQ https://www.encodeproject.org/files/ENCFF112RDQ/@@download/ENCFF112RDQ.bam 74.2 M 0 67.0 M 0.903 PE 100 100 native 28.8 M 0.0 M 20.1 M 0.541 0.70 0.69 3.17 135 1.08 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/326ab9ff-df26-4968-b82d-e55d35c77245/@@download/cross_correlation_plot/ENCFF851YSOENCFF451LIG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB648XPW michael-snyder:L-3108 "ENCFF851YSO,ENCFF451LIG" HiSeq 4000 2016-10-27T22:22:52.739628+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F6F0B2Q0369BG8QxBVY11YZP ENCSR225OKX https://www.encodeproject.org/experiments/ENCSR225OKX "transcription factor,RNA binding protein" CTCF-human omental fat pad tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF034TFU https://www.encodeproject.org/files/ENCFF034TFU/@@download/ENCFF034TFU.bam ENCFF087JTH https://www.encodeproject.org/files/ENCFF087JTH/@@download/ENCFF087JTH.bam 93.6 M 0 86.8 M 0.927 PE 100 100 native 37.5 M 0.0 M 24.8 M 0.530 0.66 0.65 2.82 180 1.07 4.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a24a95b-056c-48b9-b6b4-59e48eba8628/@@download/cross_correlation_plot/ENCFF167BYOENCFF968OEO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB913IOS michael-snyder:L-3172 "ENCFF167BYO,ENCFF968OEO" HiSeq 4000 2016-12-10T03:35:32.583147+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15V0f80369BgG8x1ygv1GK2 ENCSR118WAD https://www.encodeproject.org/experiments/ENCSR118WAD control Control-human ovary tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF484UEF https://www.encodeproject.org/files/ENCFF484UEF/@@download/ENCFF484UEF.bam ENCFF316TSB https://www.encodeproject.org/files/ENCFF316TSB/@@download/ENCFF316TSB.bam 82.5 M 0 80.5 M 0.977 PE 100 100 native 35.1 M 0.0 M 32.2 M 0.780 0.92 0.92 11.75 205 1.07 6.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/14349a27-a063-4c5a-a737-d3c279f75607/@@download/cross_correlation_plot/ENCFF279NIPENCFF838ENS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB201AGR michael-snyder:L-3162 "ENCFF838ENS,ENCFF279NIP" HiSeq 4000 2016-12-12T22:27:11.733546+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15XZ4Q0369445BJJ915X64Y ENCSR628RAE https://www.encodeproject.org/experiments/ENCSR628RAE control Control-human ovary tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF563SSP https://www.encodeproject.org/files/ENCFF563SSP/@@download/ENCFF563SSP.bam ENCFF666SHQ https://www.encodeproject.org/files/ENCFF666SHQ/@@download/ENCFF666SHQ.bam 73.8 M 0 72.5 M 0.982 PE 100 100 native 31.8 M 0.0 M 28.1 M 0.761 0.88 0.88 8.33 205 1.07 10.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/483fe817-e3cd-4d17-a648-cf4eca5b6b27/@@download/cross_correlation_plot/ENCFF330ZZVENCFF282OJG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB741OGJ michael-snyder:L-3161 "ENCFF330ZZV,ENCFF282OJG" HiSeq 4000 2016-12-10T02:39:56.072769+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qvy80369GF0YB1zjPf200 ENCSR493APD https://www.encodeproject.org/experiments/ENCSR493APD "transcription factor,RNA binding protein" CTCF-human ovary tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF550JLY https://www.encodeproject.org/files/ENCFF550JLY/@@download/ENCFF550JLY.bam ENCFF219LBN https://www.encodeproject.org/files/ENCFF219LBN/@@download/ENCFF219LBN.bam 61.3 M 0 59.3 M 0.966 PE 100 100 native 25.9 M 0.0 M 23.4 M 0.763 0.90 0.90 10.37 205 1.20 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd830173-6fd9-47b2-9086-bf9f8454c0c8/@@download/cross_correlation_plot/ENCFF112TJGENCFF816RTR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB026GMS michael-snyder:L-3167 "ENCFF112TJG,ENCFF816RTR" HiSeq 4000 2016-12-10T02:01:16.846946+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qz0803695F8Bk64ff01vv ENCSR548DDS https://www.encodeproject.org/experiments/ENCSR548DDS "transcription factor,RNA binding protein" CTCF-human ovary tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF070DUF https://www.encodeproject.org/files/ENCFF070DUF/@@download/ENCFF070DUF.bam ENCFF470UEV https://www.encodeproject.org/files/ENCFF470UEV/@@download/ENCFF470UEV.bam 76.5 M 0 73.9 M 0.966 PE 100 100 native 32.4 M 0.0 M 29.0 M 0.759 0.90 0.90 9.50 185 1.20 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/afd16672-0888-41a7-89cd-9f94d7ab68ef/@@download/cross_correlation_plot/ENCFF724TVKENCFF835LIJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB046ZPW michael-snyder:L-3168 "ENCFF724TVK,ENCFF835LIJ" HiSeq 4000 2016-12-16T09:57:55.331366+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F19Vb580369KY0qV0x3JQ3jF ENCSR754DWU https://www.encodeproject.org/experiments/ENCSR754DWU transcription factor POLR2A-human ovary tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF787NSD https://www.encodeproject.org/files/ENCFF787NSD/@@download/ENCFF787NSD.bam ENCFF922YXF https://www.encodeproject.org/files/ENCFF922YXF/@@download/ENCFF922YXF.bam 108.2 M 0 105.4 M 0.974 PE 100 100 native 46.3 M 0.0 M 37.0 M 0.684 0.80 0.80 4.87 180 1.16 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4e03142-7605-4b9e-b8c0-56443633c2cc/@@download/cross_correlation_plot/ENCFF384MEMENCFF322TJU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB646FIH michael-snyder:L-3227 "ENCFF322TJU,ENCFF384MEM" HiSeq 4000 2017-01-27T06:26:34.100522+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F255J4Q03690vp9f14546bXx ENCSR141ITZ https://www.encodeproject.org/experiments/ENCSR141ITZ control Control-human Panc1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF433NFZ https://www.encodeproject.org/files/ENCFF433NFZ/@@download/ENCFF433NFZ.bam ENCFF815WGN https://www.encodeproject.org/files/ENCFF815WGN/@@download/ENCFF815WGN.bam 236.5 M 0 207.9 M 0.879 PE 100 100 native 55.3 M 0.0 M 50.8 M 0.430 0.92 0.92 12.10 360 1.13 8.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d0c0b67-7119-4977-bf29-bba1e40b4f3d/@@download/cross_correlation_plot/ENCFF279BJH-ENCFF879OFM-ENCFF938ITQ_pooledENCFF299OEP-ENCFF736EKG-ENCFF613BNV_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB816FMP michael-snyder:L-2680 "ENCFF736EKG,ENCFF279BJH,ENCFF613BNV,ENCFF879OFM,ENCFF938ITQ,ENCFF299OEP" HiSeq 2000 2017-07-19T18:00:15.631933+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5g7P7j03695XXPJPpjQPZgB ENCSR141ITZ https://www.encodeproject.org/experiments/ENCSR141ITZ control Control-human Panc1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF368HMQ https://www.encodeproject.org/files/ENCFF368HMQ/@@download/ENCFF368HMQ.bam ENCFF815ZFH https://www.encodeproject.org/files/ENCFF815ZFH/@@download/ENCFF815ZFH.bam 236.7 M 0 214.6 M 0.907 PE 100 100 native 64.5 M 0.0 M 59.9 M 0.507 0.93 0.93 14.06 375 1.10 4.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c3b3cd4-a961-4542-af9d-21984df45e02/@@download/cross_correlation_plot/ENCFF465DRO-ENCFF960OWY-ENCFF938VAO_pooledENCFF778ZBR-ENCFF779IXW-ENCFF196VWV_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB819OUB michael-snyder:L-2681 "ENCFF938VAO,ENCFF196VWV,ENCFF465DRO,ENCFF960OWY,ENCFF779IXW,ENCFF778ZBR" HiSeq 2000 2017-07-14T19:50:07.180409+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5Yvfy80369659xz2ZpqZ8YG ENCSR698PJQ https://www.encodeproject.org/experiments/ENCSR698PJQ control Control-human Panc1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF034NCA https://www.encodeproject.org/files/ENCFF034NCA/@@download/ENCFF034NCA.bam ENCFF369WAN https://www.encodeproject.org/files/ENCFF369WAN/@@download/ENCFF369WAN.bam 98.1 M 0 83.5 M 0.851 PE 100 100 native 21.7 M 0.0 M 20.6 M 0.419 0.95 0.95 20.02 370 1.13 4.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe02d9cc-16ab-4e1a-9f2e-185a4daf6fff/@@download/cross_correlation_plot/ENCFF254MUTENCFF304YBK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB816FMP michael-snyder:L-2680 "ENCFF254MUT,ENCFF304YBK" HiSeq 4000 2016-10-27T22:27:04.681441+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bqkj03695140QP5B2vxyK ENCSR698PJQ https://www.encodeproject.org/experiments/ENCSR698PJQ control Control-human Panc1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF499MMM https://www.encodeproject.org/files/ENCFF499MMM/@@download/ENCFF499MMM.bam ENCFF554YML https://www.encodeproject.org/files/ENCFF554YML/@@download/ENCFF554YML.bam 98.7 M 0 85.5 M 0.866 PE 100 100 native 24.5 M 0.0 M 23.5 M 0.475 0.96 0.96 23.23 380 1.11 4.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3c72357-a231-4ae5-bf7c-58390330588a/@@download/cross_correlation_plot/ENCFF748EDXENCFF522IWB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB819OUB michael-snyder:L-2681 "ENCFF522IWB,ENCFF748EDX" HiSeq 4000 2016-10-27T22:27:41.853165+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bqx803695YX1xgJBKFkqg ENCSR203QEB https://www.encodeproject.org/experiments/ENCSR203QEB "transcription factor,RNA binding protein" CTCF-human Panc1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF683TLX https://www.encodeproject.org/files/ENCFF683TLX/@@download/ENCFF683TLX.bam ENCFF565QSG https://www.encodeproject.org/files/ENCFF565QSG/@@download/ENCFF565QSG.bam 86.7 M 0 85.7 M 0.988 PE 100 100 native 37.8 M 0.0 M 32.6 M 0.752 0.86 0.86 6.84 335 1.90 2.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/44ad56f8-6f08-438b-bc26-c6d44d3deb81/@@download/cross_correlation_plot/ENCFF052VWIENCFF802MME.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB941MSL michael-snyder:L-2679 "ENCFF052VWI,ENCFF802MME" HiSeq 2000 2016-10-27T22:33:18.649958+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bb800369BX1xqb1B80vJ0 ENCSR203QEB https://www.encodeproject.org/experiments/ENCSR203QEB "transcription factor,RNA binding protein" CTCF-human Panc1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF365CNT https://www.encodeproject.org/files/ENCFF365CNT/@@download/ENCFF365CNT.bam ENCFF408EZC https://www.encodeproject.org/files/ENCFF408EZC/@@download/ENCFF408EZC.bam 90.5 M 0 88.2 M 0.975 PE 100 100 native 38.0 M 0.0 M 36.1 M 0.799 0.95 0.95 20.07 285 1.73 2.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d347029-4568-4e9c-a27a-60c196ded83b/@@download/cross_correlation_plot/ENCFF447NYNENCFF865MQU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB342MOC michael-snyder:L-2678 "ENCFF865MQU,ENCFF447NYN" HiSeq 2000 2016-10-27T22:31:28.868120+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bbF80369GJ6xQfbB7F5qb ENCSR067AZA https://www.encodeproject.org/experiments/ENCSR067AZA control Control-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF242HNU https://www.encodeproject.org/files/ENCFF242HNU/@@download/ENCFF242HNU.bam ENCFF863SZQ https://www.encodeproject.org/files/ENCFF863SZQ/@@download/ENCFF863SZQ.bam 76.1 M 0 74.2 M 0.975 PE 100 100 native 32.2 M 0.0 M 29.6 M 0.779 0.92 0.92 12.57 170 1.07 9.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/8c38fead-db49-4c92-9cc4-946785614870/@@download/cross_correlation_plot/ENCFF293VFJENCFF367IPF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB934TOZ michael-snyder:L-3235 "ENCFF293VFJ,ENCFF367IPF" HiSeq 4000 2017-01-27T06:31:31.840210+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253V200369FB2f75bZ9Qz85 ENCSR584RZY https://www.encodeproject.org/experiments/ENCSR584RZY control Control-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF217IBH https://www.encodeproject.org/files/ENCFF217IBH/@@download/ENCFF217IBH.bam ENCFF725NAK https://www.encodeproject.org/files/ENCFF725NAK/@@download/ENCFF725NAK.bam 78.2 M 0 74.3 M 0.950 PE 100 100 native 31.4 M 0.0 M 30.1 M 0.770 0.96 0.96 23.41 120 1.08 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/c66eadb9-f9d2-40fe-9f9a-575e2c0c288f/@@download/cross_correlation_plot/ENCFF508LJJENCFF040RNV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB575QVC michael-snyder:L-3241 "ENCFF508LJJ,ENCFF040RNV" HiSeq 4000 2017-01-27T06:30:29.112510+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253VGQ03690Y3fv13Vv45qq ENCSR588APY https://www.encodeproject.org/experiments/ENCSR588APY control Control-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF084AUO https://www.encodeproject.org/files/ENCFF084AUO/@@download/ENCFF084AUO.bam ENCFF856ZPM https://www.encodeproject.org/files/ENCFF856ZPM/@@download/ENCFF856ZPM.bam 84.3 M 0 82.7 M 0.982 PE 100 100 native 36.6 M 0.0 M 33.0 M 0.783 0.90 0.90 9.92 160 1.08 6.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/584b8347-6edc-46a6-8ee7-286567f2aab9/@@download/cross_correlation_plot/ENCFF184KANENCFF535EZI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB687RJE michael-snyder:L-3237 "ENCFF535EZI,ENCFF184KAN" HiSeq 4000 2017-01-27T06:30:43.237494+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253VfQ0369FyB7213b81bVP ENCSR921JFJ https://www.encodeproject.org/experiments/ENCSR921JFJ control Control-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF894ZWD https://www.encodeproject.org/files/ENCFF894ZWD/@@download/ENCFF894ZWD.bam ENCFF276DOD https://www.encodeproject.org/files/ENCFF276DOD/@@download/ENCFF276DOD.bam 96.8 M 0 93.4 M 0.964 PE 100 100 native 40.7 M 0.0 M 31.8 M 0.656 0.78 0.78 4.55 140 1.07 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/0841d8f3-cc0c-42df-bc6e-79b255d33229/@@download/cross_correlation_plot/ENCFF722PTTENCFF160JLB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB676SXR michael-snyder:L-3215 "ENCFF722PTT,ENCFF160JLB" HiSeq 4000 2017-01-27T06:31:22.418539+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253QK003698PJpF5b3Y5fPK ENCSR375VXU https://www.encodeproject.org/experiments/ENCSR375VXU "transcription factor,RNA binding protein" CTCF-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF319SAQ https://www.encodeproject.org/files/ENCFF319SAQ/@@download/ENCFF319SAQ.bam ENCFF456GLK https://www.encodeproject.org/files/ENCFF456GLK/@@download/ENCFF456GLK.bam 65.9 M 0 64.1 M 0.972 PE 100 100 native 28.8 M 0.0 M 26.1 M 0.791 0.91 0.91 10.43 170 2.91 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/d85d2776-66a3-4dfa-b1a6-66fd739200d2/@@download/cross_correlation_plot/ENCFF778LROENCFF858IOX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB618IED michael-snyder:L-3234 "ENCFF778LRO,ENCFF858IOX" HiSeq 4000 2017-01-27T06:30:01.249473+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253V700369JXx505Zb65Kxv ENCSR391ZKN https://www.encodeproject.org/experiments/ENCSR391ZKN "transcription factor,RNA binding protein" CTCF-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF058IMO https://www.encodeproject.org/files/ENCFF058IMO/@@download/ENCFF058IMO.bam ENCFF974PFJ https://www.encodeproject.org/files/ENCFF974PFJ/@@download/ENCFF974PFJ.bam 72.2 M 0 69.6 M 0.965 PE 100 100 native 30.2 M 0.0 M 25.6 M 0.709 0.85 0.84 6.21 155 1.12 3.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a206dbb-adec-43df-b33d-a2e29ff162ca/@@download/cross_correlation_plot/ENCFF571EFTENCFF181HOT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB412VGJ michael-snyder:L-3240 "ENCFF571EFT,ENCFF181HOT" HiSeq 4000 2017-01-27T06:30:12.095969+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253VVQ03698y6Zj14fG2qv1 ENCSR419ANE https://www.encodeproject.org/experiments/ENCSR419ANE "transcription factor,RNA binding protein" CTCF-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF667TEE https://www.encodeproject.org/files/ENCFF667TEE/@@download/ENCFF667TEE.bam ENCFF903JMW https://www.encodeproject.org/files/ENCFF903JMW/@@download/ENCFF903JMW.bam 71.8 M 0 70.1 M 0.976 PE 100 100 native 30.8 M 0.0 M 27.3 M 0.760 0.89 0.88 8.53 170 1.91 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/7caa8733-1f7b-4ae8-9fca-22fd2bdc776c/@@download/cross_correlation_plot/ENCFF541IAKENCFF495AQO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB831HET michael-snyder:L-3236 "ENCFF541IAK,ENCFF495AQO" HiSeq 4000 2017-01-27T06:29:46.630862+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Vq8036904kff5bQ8y30b ENCSR799WDT https://www.encodeproject.org/experiments/ENCSR799WDT "transcription factor,RNA binding protein" CTCF-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF231PHQ https://www.encodeproject.org/files/ENCFF231PHQ/@@download/ENCFF231PHQ.bam ENCFF609YIV https://www.encodeproject.org/files/ENCFF609YIV/@@download/ENCFF609YIV.bam 115.4 M 0 111.9 M 0.969 PE 100 100 native 49.4 M 0.0 M 33.9 M 0.587 0.69 0.68 3.09 150 2.12 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1f3bf5c-8dcf-4649-84e0-0329345593b4/@@download/cross_correlation_plot/ENCFF895LBDENCFF454XVM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB529JMY michael-snyder:L-3214 "ENCFF895LBD,ENCFF454XVM" HiSeq 4000 2017-01-27T06:32:35.947002+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253QY00369G6559FZ0gBB50 ENCSR576PII https://www.encodeproject.org/experiments/ENCSR576PII transcription factor POLR2A-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF492NGU https://www.encodeproject.org/files/ENCFF492NGU/@@download/ENCFF492NGU.bam ENCFF666CVV https://www.encodeproject.org/files/ENCFF666CVV/@@download/ENCFF666CVV.bam 82.8 M 0 81.2 M 0.981 PE 100 100 native 36.1 M 0.0 M 24.8 M 0.598 0.69 0.68 3.07 195 1.22 2.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/220de6b5-fcd6-41a2-a636-6208dd2c9c63/@@download/cross_correlation_plot/ENCFF310NHPENCFF903PDX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB798BBO michael-snyder:L-3255 "ENCFF310NHP,ENCFF903PDX" HiSeq 4000 2017-01-27T06:23:56.242126+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253ZGQ036958ZB25bBz7zQg ENCSR995QNB https://www.encodeproject.org/experiments/ENCSR995QNB transcription factor POLR2A-human Peyer's patch tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF491YAV https://www.encodeproject.org/files/ENCFF491YAV/@@download/ENCFF491YAV.bam ENCFF476UBO https://www.encodeproject.org/files/ENCFF476UBO/@@download/ENCFF476UBO.bam 116.3 M 0 113.9 M 0.979 PE 100 100 native 50.6 M 0.0 M 36.2 M 0.623 0.72 0.71 3.37 180 1.25 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f4ae167-85ae-41d9-8208-3774a855e68a/@@download/cross_correlation_plot/ENCFF069AUEENCFF404WKI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB742ROQ michael-snyder:L-3353 "ENCFF069AUE,ENCFF404WKI" HiSeq 4000 2017-03-17T16:47:58.214471+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X3380369276GqKQ0fkyvb ENCSR047WFN https://www.encodeproject.org/experiments/ENCSR047WFN control Control-human prostate gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF662BKD https://www.encodeproject.org/files/ENCFF662BKD/@@download/ENCFF662BKD.bam ENCFF299ZPO https://www.encodeproject.org/files/ENCFF299ZPO/@@download/ENCFF299ZPO.bam 81.9 M 0 80.0 M 0.976 PE 100 100 native 34.9 M 0.0 M 28.8 M 0.704 0.83 0.82 5.55 155 1.06 6.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4a9cac5-310c-46f1-8972-67c2e6620d9e/@@download/cross_correlation_plot/ENCFF850NECENCFF364SOU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB975HVV michael-snyder:L-3142 "ENCFF850NEC,ENCFF364SOU" HiSeq 4000 2016-11-25T03:10:25.659158+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQj9j03698X1qkv5Qyzp6K ENCSR109IEL https://www.encodeproject.org/experiments/ENCSR109IEL control Control-human prostate gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF249KIQ https://www.encodeproject.org/files/ENCFF249KIQ/@@download/ENCFF249KIQ.bam ENCFF170JAT https://www.encodeproject.org/files/ENCFF170JAT/@@download/ENCFF170JAT.bam 66.5 M 0 64.6 M 0.972 PE 100 100 native 28.3 M 0.0 M 25.4 M 0.764 0.90 0.90 9.99 165 1.09 7.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/384fdc19-c46a-4014-a5d5-5a4a552c8613/@@download/cross_correlation_plot/ENCFF867DWDENCFF586WPQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB253LYU michael-snyder:L-3144 "ENCFF586WPQ,ENCFF867DWD" HiSeq 4000 2016-11-25T03:09:31.313012+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQjV003696bpJ9xxQvVX3F ENCSR499JBP https://www.encodeproject.org/experiments/ENCSR499JBP control Control-human prostate gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF293TMJ https://www.encodeproject.org/files/ENCFF293TMJ/@@download/ENCFF293TMJ.bam ENCFF802VRT https://www.encodeproject.org/files/ENCFF802VRT/@@download/ENCFF802VRT.bam 94.1 M 0 91.5 M 0.973 PE 100 100 native 39.5 M 0.0 M 33.5 M 0.711 0.85 0.85 6.43 155 1.06 3.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f0b6cba-6da1-4bae-b2e3-bf5df35ebd62/@@download/cross_correlation_plot/ENCFF201DYWENCFF538WSF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB154WFB michael-snyder:L-3322 "ENCFF538WSF,ENCFF201DYW" HiSeq 4000 2017-03-23T18:09:32.199200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QFzj036939xqBFVPPg3pG ENCSR720USO https://www.encodeproject.org/experiments/ENCSR720USO "transcription factor,RNA binding protein" CTCF-human prostate gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF447PIY https://www.encodeproject.org/files/ENCFF447PIY/@@download/ENCFF447PIY.bam ENCFF521IMW https://www.encodeproject.org/files/ENCFF521IMW/@@download/ENCFF521IMW.bam 81.4 M 0 79.1 M 0.971 PE 100 100 native 34.9 M 0.0 M 27.7 M 0.679 0.79 0.79 4.57 175 1.60 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cf5721e-6719-429a-a5d6-cbd39d4505e9/@@download/cross_correlation_plot/ENCFF899YPMENCFF389XGF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB181KTC michael-snyder:L-3140 "ENCFF389XGF,ENCFF899YPM" HiSeq 4000 2016-11-25T03:10:34.639387+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQgGQ03695kg4Z6xQG2VG3 ENCSR829HTO https://www.encodeproject.org/experiments/ENCSR829HTO "transcription factor,RNA binding protein" CTCF-human prostate gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF446IQQ https://www.encodeproject.org/files/ENCFF446IQQ/@@download/ENCFF446IQQ.bam ENCFF728XUW https://www.encodeproject.org/files/ENCFF728XUW/@@download/ENCFF728XUW.bam 87.6 M 0 84.8 M 0.968 PE 100 100 native 37.6 M 0.0 M 26.2 M 0.597 0.70 0.68 3.03 160 1.79 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8645cf4-96e7-4d25-906c-4f40c6b661aa/@@download/cross_correlation_plot/ENCFF119QESENCFF823BPQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB856XDC michael-snyder:L-3143 "ENCFF823BPQ,ENCFF119QES" HiSeq 4000 2016-11-25T03:10:23.090570+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQgV003699j2bFb9QjY1fy ENCSR122LGV https://www.encodeproject.org/experiments/ENCSR122LGV transcription factor POLR2A-human prostate gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF052VVR https://www.encodeproject.org/files/ENCFF052VVR/@@download/ENCFF052VVR.bam ENCFF767PMD https://www.encodeproject.org/files/ENCFF767PMD/@@download/ENCFF767PMD.bam 101.3 M 0 97.2 M 0.959 PE 100 100 native 42.1 M 0.0 M 26.3 M 0.519 0.62 0.61 2.44 185 1.12 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/36d664e6-bdd6-4233-b5a6-49a1a90883b2/@@download/cross_correlation_plot/ENCFF278XHEENCFF869NYZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB415GMR michael-snyder:L-3317 "ENCFF278XHE,ENCFF869NYZ" HiSeq 4000 2017-03-21T07:29:04.791127+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3814Zj036904v482vQ3pzfy ENCSR911JAX https://www.encodeproject.org/experiments/ENCSR911JAX transcription factor POLR2A-human prostate gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF604KKL https://www.encodeproject.org/files/ENCFF604KKL/@@download/ENCFF604KKL.bam ENCFF299XGS https://www.encodeproject.org/files/ENCFF299XGS/@@download/ENCFF299XGS.bam 83.8 M 0 79.4 M 0.948 PE 100 100 native 34.9 M 0.0 M 28.5 M 0.681 0.82 0.81 5.30 155 1.18 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/9bf7d267-5b9e-4a5f-8293-cd74645488ab/@@download/cross_correlation_plot/ENCFF883DYXENCFF516YRH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB143VFF michael-snyder:L-3141 "ENCFF883DYX,ENCFF516YRH" HiSeq 4000 2016-11-25T03:11:09.847292+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0qQg800369PkfyKkbQQJKGy ENCSR457JBY https://www.encodeproject.org/experiments/ENCSR457JBY control Control-human right atrium auricular region tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF804GMA https://www.encodeproject.org/files/ENCFF804GMA/@@download/ENCFF804GMA.bam ENCFF149TQI https://www.encodeproject.org/files/ENCFF149TQI/@@download/ENCFF149TQI.bam 109.2 M 0 106.3 M 0.973 PE 100 100 native 46.4 M 0.0 M 39.1 M 0.717 0.87 0.88 8.75 150 1.06 6.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ef66850-0170-4415-b34b-23993b2c3ef6/@@download/cross_correlation_plot/ENCFF766DICENCFF188JJJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB653UDR michael-snyder:L-3264 "ENCFF188JJJ,ENCFF766DIC" HiSeq 4000 2017-02-07T19:25:10.548732+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GFgg00369BJZqpFPF41Xk8 ENCSR066GBX https://www.encodeproject.org/experiments/ENCSR066GBX "transcription factor,RNA binding protein" CTCF-human right atrium auricular region tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF664CZI https://www.encodeproject.org/files/ENCFF664CZI/@@download/ENCFF664CZI.bam ENCFF342QYG https://www.encodeproject.org/files/ENCFF342QYG/@@download/ENCFF342QYG.bam 83.7 M 0 80.8 M 0.965 PE 100 100 native 35.3 M 0.0 M 18.3 M 0.436 0.52 0.48 1.74 180 1.15 2.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/851adf0f-7570-4153-a62b-a15f60307ff5/@@download/cross_correlation_plot/ENCFF560UPEENCFF367GUA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB301SWA michael-snyder:L-3263 "ENCFF367GUA,ENCFF560UPE" HiSeq 4000 2017-02-04T22:07:44.041036+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVqK0036904JQy7pPxxF64 ENCSR336OPU https://www.encodeproject.org/experiments/ENCSR336OPU control Control-human right lobe of liver tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF621CXJ https://www.encodeproject.org/files/ENCFF621CXJ/@@download/ENCFF621CXJ.bam ENCFF196ZEA https://www.encodeproject.org/files/ENCFF196ZEA/@@download/ENCFF196ZEA.bam 66.5 M 0 65.2 M 0.981 PE 100 100 native 28.5 M 0.0 M 26.4 M 0.794 0.93 0.93 14.35 210 1.08 9.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/4bbe31ad-d509-4b24-9dec-cd7e96db327c/@@download/cross_correlation_plot/ENCFF199IYXENCFF747IKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB085XRQ michael-snyder:L-3159 "ENCFF199IYX,ENCFF747IKZ" HiSeq 4000 2016-12-10T02:39:39.969942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qpqj03695Kj1j8qPQgb7g ENCSR790UYC https://www.encodeproject.org/experiments/ENCSR790UYC control Control-human right lobe of liver tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF097VOB https://www.encodeproject.org/files/ENCFF097VOB/@@download/ENCFF097VOB.bam ENCFF479ZSZ https://www.encodeproject.org/files/ENCFF479ZSZ/@@download/ENCFF479ZSZ.bam 119.5 M 0 115.8 M 0.970 PE 100 100 native 50.0 M 0.0 M 44.6 M 0.747 0.89 0.90 10.49 155 1.05 5.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/edda8831-f4b1-4d97-8756-8457d7ff5a26/@@download/cross_correlation_plot/ENCFF991CCCENCFF236USK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB762RUR michael-snyder:L-3340 "ENCFF236USK,ENCFF991CCC" HiSeq 4000 2017-03-17T16:52:22.324642+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X0vj03697VV8z1qxv2GPG ENCSR911GFJ https://www.encodeproject.org/experiments/ENCSR911GFJ "transcription factor,RNA binding protein" CTCF-human right lobe of liver tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF196CKN https://www.encodeproject.org/files/ENCFF196CKN/@@download/ENCFF196CKN.bam ENCFF980SQO https://www.encodeproject.org/files/ENCFF980SQO/@@download/ENCFF980SQO.bam 64.2 M 0 62.2 M 0.968 PE 100 100 native 27.6 M 0.0 M 24.0 M 0.747 0.87 0.87 7.47 180 1.70 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bb946b2-9ada-4eff-8736-07ff0e7bc156/@@download/cross_correlation_plot/ENCFF365XKEENCFF148DET.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB331LXY michael-snyder:L-3165 "ENCFF365XKE,ENCFF148DET" HiSeq 4000 2016-12-10T02:13:35.088003+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QzV00369BV55708G9qV43 ENCSR415MOW https://www.encodeproject.org/experiments/ENCSR415MOW transcription factor POLR2A-human right lobe of liver tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF479TYA https://www.encodeproject.org/files/ENCFF479TYA/@@download/ENCFF479TYA.bam ENCFF081JPX https://www.encodeproject.org/files/ENCFF081JPX/@@download/ENCFF081JPX.bam 77.0 M 0 73.6 M 0.956 PE 100 100 native 31.4 M 0.0 M 26.9 M 0.699 0.86 0.86 6.84 205 1.34 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/a7c2e622-7d02-416b-a08d-2ce12a88c946/@@download/cross_correlation_plot/ENCFF174GERENCFF071CTT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB564LIA michael-snyder:L-3335 "ENCFF071CTT,ENCFF174GER" HiSeq 4000 2017-03-13T17:26:42.981125+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30qvpj0369231QyGqq187fV ENCSR061MKW https://www.encodeproject.org/experiments/ENCSR061MKW control Control-human RWPE1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF007DGT https://www.encodeproject.org/files/ENCFF007DGT/@@download/ENCFF007DGT.bam ENCFF474GXI https://www.encodeproject.org/files/ENCFF474GXI/@@download/ENCFF474GXI.bam 76.9 M 0 74.1 M 0.963 PE 100 100 native 30.2 M 0.0 M 29.8 M 0.774 0.99 0.99 73.00 320 1.04 4.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/746b324e-5eac-4cdc-bc1a-43d2eb141cba/@@download/cross_correlation_plot/ENCFF426HWDENCFF617WTK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB495RTI michael-snyder:L-2627 "ENCFF617WTK,ENCFF426HWD" HiSeq 2000 2016-12-15T19:53:14.680030+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y6X00369KY0qV0x3JPx0j ENCSR061MKW https://www.encodeproject.org/experiments/ENCSR061MKW control Control-human RWPE1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF290UZX https://www.encodeproject.org/files/ENCFF290UZX/@@download/ENCFF290UZX.bam ENCFF755KSX https://www.encodeproject.org/files/ENCFF755KSX/@@download/ENCFF755KSX.bam 56.8 M 0 54.7 M 0.964 PE 100 100 native 22.3 M 0.0 M 21.7 M 0.766 0.97 0.97 38.21 320 1.04 4.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3ffb2c9-be39-4e8b-81fd-399962800eaa/@@download/cross_correlation_plot/ENCFF118YOSENCFF257ZET.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB289ZPO michael-snyder:L-2628 "ENCFF257ZET,ENCFF118YOS" HiSeq 2000 2016-12-15T06:11:39.162980+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y7500369FgbG364kz8Y2Y ENCSR248IFK https://www.encodeproject.org/experiments/ENCSR248IFK control Control-human RWPE1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF939LTT https://www.encodeproject.org/files/ENCFF939LTT/@@download/ENCFF939LTT.bam ENCFF334RAN https://www.encodeproject.org/files/ENCFF334RAN/@@download/ENCFF334RAN.bam 194.5 M 0 185.2 M 0.952 PE 100 100 native 72.9 M 0.0 M 68.9 M 0.708 0.94 0.94 17.83 325 1.03 15.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9c7306a-e525-46db-9384-85236f2fdc01/@@download/cross_correlation_plot/ENCFF716RVDENCFF894SRK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB495RTI michael-snyder:L-2627 "ENCFF716RVD,ENCFF894SRK" HiSeq 4000 2017-03-01T14:56:22.829787+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pvF9Q0369069bb8ZbZv7P7 ENCSR248IFK https://www.encodeproject.org/experiments/ENCSR248IFK control Control-human RWPE1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF614UMV https://www.encodeproject.org/files/ENCFF614UMV/@@download/ENCFF614UMV.bam ENCFF166YST https://www.encodeproject.org/files/ENCFF166YST/@@download/ENCFF166YST.bam 145.3 M 0 137.6 M 0.946 PE 100 100 native 53.5 M 0.0 M 49.3 M 0.678 0.92 0.92 12.32 310 1.02 3.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc10009d-66d8-4e4a-b337-732535fc46dd/@@download/cross_correlation_plot/ENCFF300ZLEENCFF504IJP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB289ZPO michael-snyder:L-2628 "ENCFF300ZLE,ENCFF504IJP" HiSeq 4000 2017-03-01T10:53:20.192908+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pvQBQ0369GgbfZ8bxV4G4X ENCSR303GFI https://www.encodeproject.org/experiments/ENCSR303GFI "transcription factor,RNA binding protein" CTCF-human RWPE1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF204KRO https://www.encodeproject.org/files/ENCFF204KRO/@@download/ENCFF204KRO.bam ENCFF591NDC https://www.encodeproject.org/files/ENCFF591NDC/@@download/ENCFF591NDC.bam 48.0 M 0 46.9 M 0.977 PE 100 100 native 20.8 M 0.0 M 19.6 M 0.817 0.94 0.94 17.40 290 1.23 3.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/46ebc2e0-1f80-41e0-a011-207b9cf37980/@@download/cross_correlation_plot/ENCFF291IKUENCFF059MRY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB160JPF michael-snyder:L-3082 "ENCFF291IKU,ENCFF059MRY" HiSeq 2000 2017-03-17T16:50:03.809067+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpGp8036927J0f6x0KFkz3 ENCSR303GFI https://www.encodeproject.org/experiments/ENCSR303GFI "transcription factor,RNA binding protein" CTCF-human RWPE1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF658FRS https://www.encodeproject.org/files/ENCFF658FRS/@@download/ENCFF658FRS.bam ENCFF523QCI https://www.encodeproject.org/files/ENCFF523QCI/@@download/ENCFF523QCI.bam 125.0 M 0 122.7 M 0.982 PE 100 100 native 53.7 M 0.0 M 48.2 M 0.771 0.90 0.90 9.58 350 1.13 3.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/8cab6fb9-ca5b-42ce-82eb-886528168196/@@download/cross_correlation_plot/ENCFF047YUA-ENCFF645FSY_pooledENCFF335VLV-ENCFF278JAX_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB323YFJ michael-snyder:L-3083 "ENCFF645FSY,ENCFF047YUA,ENCFF278JAX,ENCFF335VLV" HiSeq 2000 2017-07-20T07:38:27.866803+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpGxj03690004P6x59Kqjj ENCSR203KEU https://www.encodeproject.org/experiments/ENCSR203KEU "histone,histone modification,narrow histone mark" H3K27ac-human RWPE1 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF708CBX https://www.encodeproject.org/files/ENCFF708CBX/@@download/ENCFF708CBX.bam ENCFF738ADN https://www.encodeproject.org/files/ENCFF738ADN/@@download/ENCFF738ADN.bam 172.2 M 0 166.4 M 0.966 PE 100 100 native 71.2 M 0.0 M 66.4 M 0.771 0.93 0.93 14.78 310 2.05 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/a26a2066-aff6-4c2c-8c2a-c8204a10ae28/@@download/cross_correlation_plot/ENCFF950OXWENCFF054HVM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB154ZKP michael-snyder:L-2998 "ENCFF054HVM,ENCFF950OXW" HiSeq 4000 2017-03-01T12:09:14.459862+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pv4BQ03696X1x9F48v3GZ1 ENCSR203KEU https://www.encodeproject.org/experiments/ENCSR203KEU "histone,histone modification,narrow histone mark" H3K27ac-human RWPE1 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF611ZFQ https://www.encodeproject.org/files/ENCFF611ZFQ/@@download/ENCFF611ZFQ.bam ENCFF787TGR https://www.encodeproject.org/files/ENCFF787TGR/@@download/ENCFF787TGR.bam 179.8 M 0 174.3 M 0.969 PE 100 100 native 75.0 M 0.0 M 69.6 M 0.775 0.93 0.93 13.80 300 2.01 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/720918dc-a313-4ba1-b37f-02769576a865/@@download/cross_correlation_plot/ENCFF666GAHENCFF925HTP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB807RBV michael-snyder:L-2999 "ENCFF925HTP,ENCFF666GAH" HiSeq 4000 2017-03-01T12:41:57.883447+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pv4p00369PKpFGF3GyQ5fK ENCSR394DWD https://www.encodeproject.org/experiments/ENCSR394DWD control Control-human RWPE2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF169DGZ https://www.encodeproject.org/files/ENCFF169DGZ/@@download/ENCFF169DGZ.bam ENCFF455XPD https://www.encodeproject.org/files/ENCFF455XPD/@@download/ENCFF455XPD.bam 66.3 M 0 65.2 M 0.983 PE 100 100 native 28.7 M 0.0 M 27.7 M 0.837 0.97 0.97 30.63 305 1.02 12.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/6578cf5d-7bbd-44eb-b994-45ef6119d2d8/@@download/cross_correlation_plot/ENCFF137EJLENCFF643BIM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB798EFB michael-snyder:L-2780 "ENCFF137EJL,ENCFF643BIM" HiSeq 2000 2016-12-15T10:44:13.609799+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y6Vj0369F2xJYJ4yKpP6z ENCSR394DWD https://www.encodeproject.org/experiments/ENCSR394DWD control Control-human RWPE2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF690RUG https://www.encodeproject.org/files/ENCFF690RUG/@@download/ENCFF690RUG.bam ENCFF988SZY https://www.encodeproject.org/files/ENCFF988SZY/@@download/ENCFF988SZY.bam 189.7 M 0 178.7 M 0.942 PE 100 100 native 50.3 M 0.0 M 43.6 M 0.460 0.87 0.86 7.27 270 1.03 6.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3237006-b481-43e0-b4d6-d7e29741cb4c/@@download/cross_correlation_plot/ENCFF426IGI-ENCFF452ELS_pooledENCFF578MJS-ENCFF893RME_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB563ZFD michael-snyder:L-2781 "ENCFF426IGI,ENCFF578MJS,ENCFF452ELS,ENCFF893RME" HiSeq 2000 2017-07-14T19:27:18.925983+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5Yq39Q03694j964KVz4jPQq ENCSR856JJB https://www.encodeproject.org/experiments/ENCSR856JJB "transcription factor,RNA binding protein" CTCF-human RWPE2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF024SWK https://www.encodeproject.org/files/ENCFF024SWK/@@download/ENCFF024SWK.bam ENCFF980POK https://www.encodeproject.org/files/ENCFF980POK/@@download/ENCFF980POK.bam 106.9 M 0 103.6 M 0.969 PE 100 100 native 43.0 M 0.0 M 19.7 M 0.368 0.46 0.44 1.73 370 1.61 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/01201197-2abe-4ffc-b0ae-bf21034f8de3/@@download/cross_correlation_plot/ENCFF360HTD-ENCFF431JNS_pooledENCFF013WQU-ENCFF896JQM_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB933LMG michael-snyder:L-2770 "ENCFF360HTD,ENCFF431JNS,ENCFF896JQM,ENCFF013WQU" HiSeq 2000 2017-07-19T06:21:05.469237+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5g75Z00369960Zy68gV5g6Y ENCSR856JJB https://www.encodeproject.org/experiments/ENCSR856JJB "transcription factor,RNA binding protein" CTCF-human RWPE2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF575LRB https://www.encodeproject.org/files/ENCFF575LRB/@@download/ENCFF575LRB.bam ENCFF571UCS https://www.encodeproject.org/files/ENCFF571UCS/@@download/ENCFF571UCS.bam 99.9 M 0 96.8 M 0.969 PE 100 100 native 40.8 M 0.0 M 24.1 M 0.482 0.59 0.57 2.24 300 1.88 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/608f8e49-36d1-48e5-b9fe-ebd3694b7434/@@download/cross_correlation_plot/ENCFF810FJDENCFF976CUE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB666CZM michael-snyder:L-2771 "ENCFF810FJD,ENCFF976CUE" HiSeq 2000 2016-12-15T10:48:51.310186+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5g75gj03696p1Qg69KQ7pg2 ENCSR987PNT https://www.encodeproject.org/experiments/ENCSR987PNT "histone,histone modification,narrow histone mark" H3K27ac-human RWPE2 immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF681ELB https://www.encodeproject.org/files/ENCFF681ELB/@@download/ENCFF681ELB.bam ENCFF677GPG https://www.encodeproject.org/files/ENCFF677GPG/@@download/ENCFF677GPG.bam 114.8 M 0 112.6 M 0.981 PE 100 100 native 49.1 M 0.0 M 23.3 M 0.407 0.47 0.46 1.78 430 1.29 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/94706152-b97f-43d4-9102-4416f96baf10/@@download/cross_correlation_plot/ENCFF504UZA-ENCFF685WRF_pooledENCFF420UBY-ENCFF844OSE_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB566UMR michael-snyder:L-2775 "ENCFF420UBY,ENCFF844OSE,ENCFF685WRF,ENCFF504UZA" HiSeq 2000 2017-07-19T07:25:39.907631+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5g7By0036976Y1v68qVXGF5 ENCSR987PNT https://www.encodeproject.org/experiments/ENCSR987PNT "histone,histone modification,narrow histone mark" H3K27ac-human RWPE2 immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF245ORL https://www.encodeproject.org/files/ENCFF245ORL/@@download/ENCFF245ORL.bam ENCFF299SSE https://www.encodeproject.org/files/ENCFF299SSE/@@download/ENCFF299SSE.bam 73.5 M 0 72.5 M 0.987 PE 100 100 native 33.2 M 0.0 M 27.1 M 0.737 0.82 0.81 5.14 340 1.42 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/489678b0-0d85-488a-8c9d-4a44b0048924/@@download/cross_correlation_plot/ENCFF326ROPENCFF548VDA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB446XXQ michael-snyder:L-2776 "ENCFF548VDA,ENCFF326ROP" HiSeq 2000 2017-03-04T01:40:08.840080+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2vv06Q0369PGfpQ3jZKZG34 ENCSR168DXB https://www.encodeproject.org/experiments/ENCSR168DXB control Control-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF228OBH https://www.encodeproject.org/files/ENCFF228OBH/@@download/ENCFF228OBH.bam ENCFF706JJQ https://www.encodeproject.org/files/ENCFF706JJQ/@@download/ENCFF706JJQ.bam 50.6 M 0 49.4 M 0.975 PE 100 None 21.8 M 0.0 M 19.5 M 0.770 0.89 0.89 9.22 200 1.07 4.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/18569803-6963-41d4-b378-2dbded627b38/@@download/cross_correlation_plot/ENCFF211FIKENCFF463FFT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB458OCK michael-snyder:L-2815 "ENCFF463FFT,ENCFF211FIK" HiSeq 2000 2016-05-06T18:17:24.641562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq77j0369GbFx9y02x3zGk ENCSR187FNC https://www.encodeproject.org/experiments/ENCSR187FNC control Control-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF600VZB https://www.encodeproject.org/files/ENCFF600VZB/@@download/ENCFF600VZB.bam ENCFF342LTC https://www.encodeproject.org/files/ENCFF342LTC/@@download/ENCFF342LTC.bam 125.2 M 0 119.2 M 0.953 PE 100 100 native 51.1 M 0.0 M 44.6 M 0.713 0.87 0.87 7.67 195 1.04 2.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b45def4-134c-43c3-b3b2-025502df5540/@@download/cross_correlation_plot/ENCFF848NLYENCFF592JZV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB431MNC michael-snyder:L-2807 "ENCFF592JZV,ENCFF848NLY" HiSeq 4000 2016-09-01T21:40:27.932330+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vky803693Pvg5gky8bV3y ENCSR225KOT https://www.encodeproject.org/experiments/ENCSR225KOT control Control-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF324GFZ https://www.encodeproject.org/files/ENCFF324GFZ/@@download/ENCFF324GFZ.bam ENCFF193IMZ https://www.encodeproject.org/files/ENCFF193IMZ/@@download/ENCFF193IMZ.bam 65.6 M 0 63.4 M 0.967 PE 100 None 27.6 M 0.0 M 26.6 M 0.810 0.96 0.96 27.65 195 1.06 3.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/276c8f83-2824-4742-9b35-972cd0945aa4/@@download/cross_correlation_plot/ENCFF075GWCENCFF682CVU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB965GUX michael-snyder:L-2806 "ENCFF682CVU,ENCFF075GWC" HiSeq 2000 2016-05-06T18:20:17.935006+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq8j0036961GyjjQ2QP8Bj ENCSR236MWZ https://www.encodeproject.org/experiments/ENCSR236MWZ control Control-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF736XBY https://www.encodeproject.org/files/ENCFF736XBY/@@download/ENCFF736XBY.bam ENCFF452PGL https://www.encodeproject.org/files/ENCFF452PGL/@@download/ENCFF452PGL.bam 52.9 M 0 51.7 M 0.978 PE 100 None 22.9 M 0.0 M 20.9 M 0.789 0.91 0.91 10.93 195 1.08 4.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/beb1aef0-4eb5-4984-988b-ad5baf5fae5a/@@download/cross_correlation_plot/ENCFF826QREENCFF422CWQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB802CDJ michael-snyder:L-2812 "ENCFF422CWQ,ENCFF826QRE" HiSeq 2000 2016-05-06T18:17:12.750619+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq8zj0369GkFPvq42zg1PZ ENCSR439EEV https://www.encodeproject.org/experiments/ENCSR439EEV control Control-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF654NZG https://www.encodeproject.org/files/ENCFF654NZG/@@download/ENCFF654NZG.bam ENCFF464RDY https://www.encodeproject.org/files/ENCFF464RDY/@@download/ENCFF464RDY.bam 83.2 M 0 79.9 M 0.960 PE 100 100 native 35.0 M 0.0 M 28.2 M 0.678 0.81 0.80 4.99 210 1.05 4.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/0932d4cc-2e56-4961-9699-f137d4a95fbd/@@download/cross_correlation_plot/ENCFF887KWIENCFF652PMB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB458OCK michael-snyder:L-2815 "ENCFF652PMB,ENCFF887KWI" HiSeq 4000 2016-09-01T21:35:53.024076+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VpKQ0369B8gKYkby8yVzF ENCSR517ZYR https://www.encodeproject.org/experiments/ENCSR517ZYR control Control-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF303ZCH https://www.encodeproject.org/files/ENCFF303ZCH/@@download/ENCFF303ZCH.bam ENCFF511HBN https://www.encodeproject.org/files/ENCFF511HBN/@@download/ENCFF511HBN.bam 55.3 M 0 53.9 M 0.974 PE 100 None 23.4 M 0.0 M 22.0 M 0.794 0.94 0.94 16.50 195 1.07 3.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a444bca-d9e2-49f6-8eb3-45fb47c08f92/@@download/cross_correlation_plot/ENCFF206EQFENCFF014WAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB431MNC michael-snyder:L-2807 "ENCFF014WAY,ENCFF206EQF" HiSeq 2000 2016-05-06T18:15:41.550661+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKjj0369GkFPvq42zg1bX ENCSR747VNS https://www.encodeproject.org/experiments/ENCSR747VNS control Control-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF278DTC https://www.encodeproject.org/files/ENCFF278DTC/@@download/ENCFF278DTC.bam ENCFF823RZC https://www.encodeproject.org/files/ENCFF823RZC/@@download/ENCFF823RZC.bam 155.9 M 0 149.9 M 0.962 PE 100 100 native 66.1 M 0.0 M 49.4 M 0.633 0.75 0.74 3.78 205 1.03 5.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0a1479f-eab8-4673-927a-e6a5162ef579/@@download/cross_correlation_plot/ENCFF646DHKENCFF973DKC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB802CDJ michael-snyder:L-2812 "ENCFF973DKC,ENCFF646DHK" HiSeq 4000 2016-12-07T18:37:04.702074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XKq803691Pqx659jbbK1j ENCSR983XKG https://www.encodeproject.org/experiments/ENCSR983XKG control Control-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF978YES https://www.encodeproject.org/files/ENCFF978YES/@@download/ENCFF978YES.bam ENCFF524AJL https://www.encodeproject.org/files/ENCFF524AJL/@@download/ENCFF524AJL.bam 175.5 M 0 166.9 M 0.951 PE 100 100 native 72.2 M 0.0 M 63.9 M 0.728 0.89 0.88 8.53 195 1.03 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/8accf1da-fd52-4517-af16-e0764160da7e/@@download/cross_correlation_plot/ENCFF913JQMENCFF024VTZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB965GUX michael-snyder:L-2806 "ENCFF024VTZ,ENCFF913JQM" HiSeq 4000 2016-09-01T21:47:57.086322+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vjz8036936XQ0Zkzqjfzz ENCSR222SQE https://www.encodeproject.org/experiments/ENCSR222SQE "transcription factor,RNA binding protein" CTCF-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF503UVW https://www.encodeproject.org/files/ENCFF503UVW/@@download/ENCFF503UVW.bam ENCFF619UBW https://www.encodeproject.org/files/ENCFF619UBW/@@download/ENCFF619UBW.bam 238.7 M 0 229.9 M 0.963 PE 100 100 native 98.9 M 0.0 M 64.1 M 0.537 0.65 0.63 2.57 215 1.06 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/10361323-97f2-4577-af2b-72abc9998908/@@download/cross_correlation_plot/ENCFF800GHLENCFF100YUK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB123LEI michael-snyder:L-2805 "ENCFF100YUK,ENCFF800GHL" HiSeq 4000 2016-10-26T17:56:09.089526+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vk1j03693J600yky6f5x2 ENCSR323POR https://www.encodeproject.org/experiments/ENCSR323POR "transcription factor,RNA binding protein" CTCF-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF758VNF https://www.encodeproject.org/files/ENCFF758VNF/@@download/ENCFF758VNF.bam ENCFF685MJK https://www.encodeproject.org/files/ENCFF685MJK/@@download/ENCFF685MJK.bam 51.2 M 0 44.8 M 0.875 PE 100 100 native 19.7 M 0.0 M 18.7 M 0.732 0.95 0.95 19.59 220 1.09 3.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/970bfa12-c756-4c81-8dcb-0efdae3a9c33/@@download/cross_correlation_plot/ENCFF764UVXENCFF423OGZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB115OMI michael-snyder:L-2810 "ENCFF423OGZ,ENCFF764UVX" HiSeq 2000 2016-11-23T06:51:55.317056+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGpY0036973YbG98px35XQ ENCSR341VKC https://www.encodeproject.org/experiments/ENCSR341VKC "transcription factor,RNA binding protein" CTCF-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF301NCC https://www.encodeproject.org/files/ENCFF301NCC/@@download/ENCFF301NCC.bam ENCFF724OKU https://www.encodeproject.org/files/ENCFF724OKU/@@download/ENCFF724OKU.bam 47.5 M 0 43.7 M 0.921 PE 100 100 native 19.1 M 0.0 M 16.8 M 0.708 0.88 0.88 8.08 215 1.17 2.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d6e89c3-0d41-4c7c-9643-33c2713d5aa8/@@download/cross_correlation_plot/ENCFF409YCDENCFF889IFR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB933FIX michael-snyder:L-2803 "ENCFF409YCD,ENCFF889IFR" HiSeq 2000 2016-11-23T06:51:43.349704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGp380369G5PvV8xFg3b6x ENCSR721AHD https://www.encodeproject.org/experiments/ENCSR721AHD "transcription factor,RNA binding protein" CTCF-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF414EUV https://www.encodeproject.org/files/ENCFF414EUV/@@download/ENCFF414EUV.bam ENCFF907VQA https://www.encodeproject.org/files/ENCFF907VQA/@@download/ENCFF907VQA.bam 91.5 M 0 81.7 M 0.893 PE 100 100 native 35.6 M 0.0 M 27.4 M 0.599 0.77 0.76 4.13 220 1.14 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/a71f33c1-4377-4e9b-a835-4f473e164cf9/@@download/cross_correlation_plot/ENCFF991UEVENCFF547KHV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB933FIX michael-snyder:L-2803 "ENCFF547KHV,ENCFF991UEV" HiSeq 4000 2016-12-07T18:39:11.842244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13X9XQ0369198qP4Bq5VxFy ENCSR925GDS https://www.encodeproject.org/experiments/ENCSR925GDS "transcription factor,RNA binding protein" CTCF-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF467EPK https://www.encodeproject.org/files/ENCFF467EPK/@@download/ENCFF467EPK.bam ENCFF059ALD https://www.encodeproject.org/files/ENCFF059ALD/@@download/ENCFF059ALD.bam 121.8 M 0 104.0 M 0.854 PE 100 100 native 45.5 M 0.0 M 39.0 M 0.641 0.86 0.85 6.78 225 1.06 2.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/5549030b-b6d4-40fc-9935-789b3fbf4a7c/@@download/cross_correlation_plot/ENCFF234XJVENCFF321IVY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB115OMI michael-snyder:L-2810 "ENCFF321IVY,ENCFF234XJV" HiSeq 4000 2016-12-07T18:35:08.182791+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XKZ003693P4x3KfkPX4y5 ENCSR322JEO https://www.encodeproject.org/experiments/ENCSR322JEO transcription factor POLR2A-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF065WHF https://www.encodeproject.org/files/ENCFF065WHF/@@download/ENCFF065WHF.bam ENCFF337DWJ https://www.encodeproject.org/files/ENCFF337DWJ/@@download/ENCFF337DWJ.bam 127.5 M 0 94.4 M 0.740 PE 100 100 native 40.9 M 0.0 M 31.1 M 0.487 0.76 0.75 3.93 225 1.06 4.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b663830-d4a4-4300-a085-432a853cf469/@@download/cross_correlation_plot/ENCFF015MWEENCFF405OKO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB680QMR michael-snyder:L-2811 "ENCFF405OKO,ENCFF015MWE" HiSeq 4000 2016-12-07T18:42:31.491045+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XF5803690PQjQ59JQ5ffK ENCSR338PIQ https://www.encodeproject.org/experiments/ENCSR338PIQ transcription factor POLR2A-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF554WJP https://www.encodeproject.org/files/ENCFF554WJP/@@download/ENCFF554WJP.bam ENCFF511PAA https://www.encodeproject.org/files/ENCFF511PAA/@@download/ENCFF511PAA.bam 48.2 M 0 36.6 M 0.759 PE 100 100 native 16.1 M 0.0 M 14.6 M 0.606 0.91 0.91 10.52 225 1.10 5.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ace1d3b-f059-4bd3-99f9-0b5c22136afc/@@download/cross_correlation_plot/ENCFF131PPCENCFF520QGZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB680QMR michael-snyder:L-2811 "ENCFF131PPC,ENCFF520QGZ" HiSeq 2000 2016-11-23T06:51:47.826926+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGkXQ0369810YVfV49qqQZ ENCSR431EHE https://www.encodeproject.org/experiments/ENCSR431EHE transcription factor POLR2A-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF646MZX https://www.encodeproject.org/files/ENCFF646MZX/@@download/ENCFF646MZX.bam ENCFF269VBN https://www.encodeproject.org/files/ENCFF269VBN/@@download/ENCFF269VBN.bam 80.8 M 0 74.9 M 0.926 PE 100 100 native 32.1 M 0.0 M 20.8 M 0.514 0.65 0.64 2.67 225 1.14 2.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/83df7036-56dc-43b7-99f9-9c5fff7c4992/@@download/cross_correlation_plot/ENCFF943KNWENCFF509ERN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB490DBO michael-snyder:L-2804 "ENCFF943KNW,ENCFF509ERN" HiSeq 4000 2016-09-01T21:36:18.257665+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vp48036936XQ0Zkzqjg1K ENCSR472VBD https://www.encodeproject.org/experiments/ENCSR472VBD transcription factor POLR2A-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF081LPR https://www.encodeproject.org/files/ENCFF081LPR/@@download/ENCFF081LPR.bam ENCFF448EPT https://www.encodeproject.org/files/ENCFF448EPT/@@download/ENCFF448EPT.bam 98.5 M 0 94.0 M 0.955 PE 100 100 native 40.4 M 0.0 M 30.0 M 0.610 0.74 0.73 3.64 225 1.09 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/e732a1b7-9a74-4669-b279-b7caeac95e10/@@download/cross_correlation_plot/ENCFF843LGKENCFF353IIG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB963QBK michael-snyder:L-2808 "ENCFF843LGK,ENCFF353IIG" HiSeq 4000 2016-09-01T21:36:53.358016+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VpG003693J600yky6f60Y ENCSR724FCJ https://www.encodeproject.org/experiments/ENCSR724FCJ transcription factor POLR2A-human sigmoid colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF994WIY https://www.encodeproject.org/files/ENCFF994WIY/@@download/ENCFF994WIY.bam ENCFF713XPN https://www.encodeproject.org/files/ENCFF713XPN/@@download/ENCFF713XPN.bam 99.8 M 0 44.7 M 0.448 PE 100 100 native 19.7 M 0.0 M 11.0 M 0.221 0.56 0.54 2.09 220 1.34 2.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/edd1f50d-093d-4ab0-9543-0b20f8197d4f/@@download/cross_correlation_plot/ENCFF112BSIENCFF160QJZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB584MNM michael-snyder:L-2814 "ENCFF112BSI,ENCFF160QJZ" HiSeq 4000 2016-09-01T21:36:50.705151+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vk4j0369G4Xfqzxy8QVFp ENCSR000EIC https://www.encodeproject.org/experiments/ENCSR000EIC "transcription factor,RNA binding protein" CTCF-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF973FUN https://www.encodeproject.org/files/ENCFF973FUN/@@download/ENCFF973FUN.bam ENCFF458TFX https://www.encodeproject.org/files/ENCFF458TFX/@@download/ENCFF458TFX.bam 28.3 M 0 26.6 M 0.939 SE 36 36 native 0.0 M 21.4 M 18.1 M 0.639 0.85 0.89 10.78 110 2.93 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/51e22008-2ca8-4063-8387-97f9404cd477/@@download/cross_correlation_plot/ENCFF000ZQI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGL ENCFF000ZQI Illumina Genome Analyzer 2016-12-11T04:17:44.747953+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165KQ803697yz601ypVJ3bK ENCSR000EIC https://www.encodeproject.org/experiments/ENCSR000EIC "transcription factor,RNA binding protein" CTCF-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF430DOC https://www.encodeproject.org/files/ENCFF430DOC/@@download/ENCFF430DOC.bam ENCFF347NPN https://www.encodeproject.org/files/ENCFF347NPN/@@download/ENCFF347NPN.bam 23.3 M 0 21.7 M 0.931 SE 36 36 native 0.0 M 16.9 M 14.7 M 0.629 0.88 0.88 8.86 130 2.27 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d6634b4-e652-4617-bb5c-da6160ebf6ea/@@download/cross_correlation_plot/ENCFF000ZQL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATT ENCFF000ZQL Illumina Genome Analyzer 2016-12-11T04:13:35.479691+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165KYQ0369GF0YB1zjPf6y4 ENCSR000EHV https://www.encodeproject.org/experiments/ENCSR000EHV transcription factor EP300-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF466XEY https://www.encodeproject.org/files/ENCFF466XEY/@@download/ENCFF466XEY.bam ENCFF067AKD https://www.encodeproject.org/files/ENCFF067AKD/@@download/ENCFF067AKD.bam 31.7 M 0 30.5 M 0.963 SE 36 36 native 0.0 M 24.2 M 22.4 M 0.708 0.93 0.93 13.59 130 1.16 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1fb1874-b4ea-4431-9d71-2099010276f0/@@download/cross_correlation_plot/ENCFF000ZRV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AOP ENCFF000ZRV Illumina Genome Analyzer 2016-12-11T08:37:21.708108+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166X500369GF0YB1zjPf794 ENCSR000EHV https://www.encodeproject.org/experiments/ENCSR000EHV transcription factor EP300-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF099HWJ https://www.encodeproject.org/files/ENCFF099HWJ/@@download/ENCFF099HWJ.bam ENCFF244VAK https://www.encodeproject.org/files/ENCFF244VAK/@@download/ENCFF244VAK.bam 32.6 M 0 31.3 M 0.961 SE 36 36 native 0.0 M 25.5 M 23.2 M 0.712 0.91 0.92 12.11 140 1.44 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/be262c6e-49be-4154-aef3-292567e924ab/@@download/cross_correlation_plot/ENCFF000ZRX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAU ENCFF000ZRX Illumina Genome Analyzer 2016-12-11T08:35:59.681485+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166XF003697yz601ypVJ3yp ENCSR422ZAO https://www.encodeproject.org/experiments/ENCSR422ZAO transcription factor IRF3-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF040MDB https://www.encodeproject.org/files/ENCFF040MDB/@@download/ENCFF040MDB.bam ENCFF052THM https://www.encodeproject.org/files/ENCFF052THM/@@download/ENCFF052THM.bam 26.9 M 0 24.7 M 0.921 SE 36 36 native 0.0 M 18.7 M 16.2 M 0.603 0.87 0.87 7.27 125 1.04 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/69154770-c26a-43b1-a9cf-8bd0c9c2babf/@@download/cross_correlation_plot/ENCFF002EWT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB406QGW michael-snyder:IRF3_sc-9082_SK-N-SH_Rep2 ENCFF002EWT Illumina Genome Analyzer IIx 2016-08-30T17:48:28.766895+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ4VQ0369F710GX9Bgbg35 ENCSR422ZAO https://www.encodeproject.org/experiments/ENCSR422ZAO transcription factor IRF3-human SK-N-SH immortalized cell line 3 michael-snyder ENCODE3 GRCh38 ENCFF808EIJ https://www.encodeproject.org/files/ENCFF808EIJ/@@download/ENCFF808EIJ.bam ENCFF621LCK https://www.encodeproject.org/files/ENCFF621LCK/@@download/ENCFF621LCK.bam 26.8 M 0 25.7 M 0.956 SE 36 36 native 0.0 M 20.1 M 17.9 M 0.666 0.89 0.89 9.13 135 1.05 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/529bfeee-a2fd-43d0-9464-ee84e7028568/@@download/cross_correlation_plot/ENCFF002EWN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB086FNB michael-snyder:IRF3_sc-9082_SK-N-SH_Rep3 ENCFF002EWN Illumina Genome Analyzer IIx 2016-08-30T17:48:08.318465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ4Z00369P2yGzP5BYGyxJ ENCSR000EIB https://www.encodeproject.org/experiments/ENCSR000EIB transcription factor JUND-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF655YHQ https://www.encodeproject.org/files/ENCFF655YHQ/@@download/ENCFF655YHQ.bam ENCFF394ZFD https://www.encodeproject.org/files/ENCFF394ZFD/@@download/ENCFF394ZFD.bam 28.2 M 0 26.8 M 0.953 SE 36 36 native 0.0 M 20.9 M 19.7 M 0.701 0.95 0.95 18.50 125 1.14 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/81fbc67f-85b6-42e8-bb63-8db45ecb7a8e/@@download/cross_correlation_plot/ENCFF000ZQV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKD ENCFF000ZQV Illumina Genome Analyzer 2016-11-30T18:11:28.377808+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4Vg00369KGzVG4GJz9Fkp ENCSR000EIB https://www.encodeproject.org/experiments/ENCSR000EIB transcription factor JUND-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF017ICG https://www.encodeproject.org/files/ENCFF017ICG/@@download/ENCFF017ICG.bam ENCFF392FUM https://www.encodeproject.org/files/ENCFF392FUM/@@download/ENCFF392FUM.bam 27.8 M 0 26.1 M 0.937 SE 36 36 native 0.0 M 20.0 M 18.5 M 0.665 0.93 0.93 13.88 125 1.27 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/f76bb594-81b8-4c79-adfe-cab1cc61d366/@@download/cross_correlation_plot/ENCFF000ZQY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AKC ENCFF000ZQY Illumina Genome Analyzer 2016-11-30T18:11:31.799053+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4VqQ036985fFbV0Z7XfJy ENCSR000EIA https://www.encodeproject.org/experiments/ENCSR000EIA transcription factor MXI1-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF955PGN https://www.encodeproject.org/files/ENCFF955PGN/@@download/ENCFF955PGN.bam ENCFF828EYM https://www.encodeproject.org/files/ENCFF828EYM/@@download/ENCFF828EYM.bam 33.0 M 0 32.4 M 0.982 SE 36 36 native 0.0 M 26.3 M 23.4 M 0.709 0.89 0.89 9.33 115 1.29 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/009666f2-f337-4bae-82a9-dcdd3468c250/@@download/cross_correlation_plot/ENCFF000ZRE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEL ENCFF000ZRE Illumina Genome Analyzer 2016-12-11T04:14:17.148421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165BQ80369GF0YB1zjPf6vq ENCSR000EIA https://www.encodeproject.org/experiments/ENCSR000EIA transcription factor MXI1-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF349TVK https://www.encodeproject.org/files/ENCFF349TVK/@@download/ENCFF349TVK.bam ENCFF277EQB https://www.encodeproject.org/files/ENCFF277EQB/@@download/ENCFF277EQB.bam 27.9 M 0 26.5 M 0.949 SE 36 36 native 0.0 M 21.0 M 18.7 M 0.669 0.89 0.89 8.68 125 1.16 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/07a09ed6-b229-4735-9136-777ac9f0a08d/@@download/cross_correlation_plot/ENCFF000ZRG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AGI ENCFF000ZRG Illumina Genome Analyzer 2016-12-11T04:11:04.649571+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Bb80369PvYp91zK1PxVB ENCSR000EHZ https://www.encodeproject.org/experiments/ENCSR000EHZ transcription factor NRF1-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF854WDA https://www.encodeproject.org/files/ENCFF854WDA/@@download/ENCFF854WDA.bam ENCFF540OFL https://www.encodeproject.org/files/ENCFF540OFL/@@download/ENCFF540OFL.bam 29.6 M 0 27.4 M 0.925 SE 36 36 native 0.0 M 21.3 M 19.1 M 0.644 0.90 0.90 10.38 110 1.30 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e92d5bf-8301-405c-a089-2a1368db17c7/@@download/cross_correlation_plot/ENCFF000ZRN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AAW ENCFF000ZRN Illumina Genome Analyzer 2016-12-11T08:42:19.666735+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166XV00369BV55708G9qbbg ENCSR000EHZ https://www.encodeproject.org/experiments/ENCSR000EHZ transcription factor NRF1-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF677UDU https://www.encodeproject.org/files/ENCFF677UDU/@@download/ENCFF677UDU.bam ENCFF018AZV https://www.encodeproject.org/files/ENCFF018AZV/@@download/ENCFF018AZV.bam 20.7 M 0 16.8 M 0.810 SE 36 36 native 0.0 M 12.9 M 10.3 M 0.497 0.80 0.80 4.73 115 1.60 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/809dd7ea-6cb2-4460-9519-9d451c66a2e1/@@download/cross_correlation_plot/ENCFF000ZRP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALJ ENCFF000ZRP Illumina Genome Analyzer 2016-12-11T05:04:26.383591+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Xf80369KQ3Yk1yz1kj2y ENCSR000EHU https://www.encodeproject.org/experiments/ENCSR000EHU control rabbit-IgG-control-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF282PXC https://www.encodeproject.org/files/ENCFF282PXC/@@download/ENCFF282PXC.bam ENCFF740DXN https://www.encodeproject.org/files/ENCFF740DXN/@@download/ENCFF740DXN.bam 23.9 M 0 22.3 M 0.933 SE 36 36 native 0.0 M 17.1 M 15.0 M 0.627 0.88 0.87 7.63 130 1.06 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b992df1-cd21-4a3c-bd8f-edaa7010733c/@@download/cross_correlation_plot/ENCFF000ZQO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ADV ENCFF000ZQO Illumina Genome Analyzer 2016-10-26T17:37:26.852942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08281Q03698F1qV3kBFq31b ENCSR000EHU https://www.encodeproject.org/experiments/ENCSR000EHU control rabbit-IgG-control-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF144BVJ https://www.encodeproject.org/files/ENCFF144BVJ/@@download/ENCFF144BVJ.bam ENCFF888KAT https://www.encodeproject.org/files/ENCFF888KAT/@@download/ENCFF888KAT.bam 20.2 M 0 18.5 M 0.914 SE 36 36 native 0.0 M 13.8 M 12.1 M 0.600 0.89 0.88 8.38 120 1.06 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/31c1c1a9-73cb-4579-aad6-f5e27522a5cf/@@download/cross_correlation_plot/ENCFF000ZQQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB990TMD ENCFF000ZQQ Illumina Genome Analyzer 2016-10-26T17:37:24.532384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08287003695140QP5B2vfgB ENCSR000EHX https://www.encodeproject.org/experiments/ENCSR000EHX transcription factor RAD21-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF806TYP https://www.encodeproject.org/files/ENCFF806TYP/@@download/ENCFF806TYP.bam ENCFF833CKI https://www.encodeproject.org/files/ENCFF833CKI/@@download/ENCFF833CKI.bam 31.3 M 0 30.5 M 0.974 SE 36 36 native 0.0 M 24.6 M 21.9 M 0.698 0.89 0.91 12.87 115 2.05 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa9dd84d-bec5-46e3-b6f6-d141d9612779/@@download/cross_correlation_plot/ENCFF000ZSD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AEG ENCFF000ZSD Illumina Genome Analyzer 2016-12-11T06:49:23.922112+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Q0003692yykb1zBpz860 ENCSR000EHX https://www.encodeproject.org/experiments/ENCSR000EHX transcription factor RAD21-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF502NTX https://www.encodeproject.org/files/ENCFF502NTX/@@download/ENCFF502NTX.bam ENCFF475FAR https://www.encodeproject.org/files/ENCFF475FAR/@@download/ENCFF475FAR.bam 33.1 M 0 32.9 M 0.993 SE 36 36 native 0.0 M 27.7 M 22.6 M 0.682 0.82 0.85 7.66 125 2.38 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/17346d6a-c779-469c-8247-16314701c022/@@download/cross_correlation_plot/ENCFF000ZSF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ALK ENCFF000ZSF Illumina Genome Analyzer 2016-12-11T08:37:55.060907+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Q5j0369KbxV61z4GFx0X ENCSR009TKN https://www.encodeproject.org/experiments/ENCSR009TKN transcription factor RCOR1-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF782XEN https://www.encodeproject.org/files/ENCFF782XEN/@@download/ENCFF782XEN.bam ENCFF864QZM https://www.encodeproject.org/files/ENCFF864QZM/@@download/ENCFF864QZM.bam 32.3 M 0 31.3 M 0.970 SE 36 36 native 0.0 M 24.5 M 23.2 M 0.721 0.95 0.95 20.46 110 1.09 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdf51255-9c67-40ba-9cfe-1e5e7e048481/@@download/cross_correlation_plot/ENCFF002ECI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB147KXE michael-snyder:CoREST_sc-30189_SK-N-SH_Rep1 ENCFF002ECI Illumina Genome Analyzer IIx 2016-08-30T17:54:36.511933+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ1k00369BQ7VQPxBqP1Kg ENCSR009TKN https://www.encodeproject.org/experiments/ENCSR009TKN transcription factor RCOR1-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF341ZOE https://www.encodeproject.org/files/ENCFF341ZOE/@@download/ENCFF341ZOE.bam ENCFF731WRW https://www.encodeproject.org/files/ENCFF731WRW/@@download/ENCFF731WRW.bam 31.9 M 0 31.4 M 0.983 SE 36 36 native 0.0 M 24.9 M 23.5 M 0.736 0.95 0.95 18.35 120 1.20 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/10446a55-a923-40bf-9e2c-bb5f3a933608/@@download/cross_correlation_plot/ENCFF002ECK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB056NEL michael-snyder:CoREST_sc-30189_SK-N-SH_Rep2 ENCFF002ECK Illumina Genome Analyzer IIx 2016-08-30T17:54:28.692422+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ1q80369F710GX9Bgbg10 ENCSR000EHY https://www.encodeproject.org/experiments/ENCSR000EHY transcription factor RFX5-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF154YWN https://www.encodeproject.org/files/ENCFF154YWN/@@download/ENCFF154YWN.bam ENCFF879RUC https://www.encodeproject.org/files/ENCFF879RUC/@@download/ENCFF879RUC.bam 30.4 M 0 28.6 M 0.941 SE 36 36 native 0.0 M 22.4 M 19.6 M 0.645 0.88 0.88 8.29 125 1.12 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2501823-7391-4d20-96a0-0e8084b1a67c/@@download/cross_correlation_plot/ENCFF000ZSL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AQP ENCFF000ZSL Illumina Genome Analyzer 2016-12-11T04:11:05.593585+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Bq80369GF0YB1zjPf6x6 ENCSR000EHY https://www.encodeproject.org/experiments/ENCSR000EHY transcription factor RFX5-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF634AOY https://www.encodeproject.org/files/ENCFF634AOY/@@download/ENCFF634AOY.bam ENCFF272BVY https://www.encodeproject.org/files/ENCFF272BVY/@@download/ENCFF272BVY.bam 33.5 M 0 33.0 M 0.986 SE 36 36 native 0.0 M 26.3 M 23.2 M 0.692 0.89 0.89 9.45 135 1.12 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/48662302-cff1-4b45-b31d-49922c9bbfcb/@@download/cross_correlation_plot/ENCFF000ZSN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209ATU ENCFF000ZSN Illumina Genome Analyzer 2016-12-11T04:18:44.859116+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165F000369PJ8BP63qf1Fk5 ENCSR000EHW https://www.encodeproject.org/experiments/ENCSR000EHW transcription factor SMC3-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE2 GRCh38 ENCFF412VEJ https://www.encodeproject.org/files/ENCFF412VEJ/@@download/ENCFF412VEJ.bam ENCFF693KEX https://www.encodeproject.org/files/ENCFF693KEX/@@download/ENCFF693KEX.bam 26.5 M 0 25.5 M 0.962 SE 36 36 native 0.0 M 20.4 M 19.0 M 0.718 0.94 0.94 17.97 110 1.65 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/554cc434-a83b-4a8a-8fbf-ad5f9e435340/@@download/cross_correlation_plot/ENCFF000ZSS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209APG ENCFF000ZSS Illumina Genome Analyzer 2016-12-11T04:01:48.236797+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1651JQ0369GF0YB1zjPf6kv ENCSR000EHW https://www.encodeproject.org/experiments/ENCSR000EHW transcription factor SMC3-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE2 GRCh38 ENCFF276BPO https://www.encodeproject.org/files/ENCFF276BPO/@@download/ENCFF276BPO.bam ENCFF116QFT https://www.encodeproject.org/files/ENCFF116QFT/@@download/ENCFF116QFT.bam 25.1 M 0 23.8 M 0.951 SE 36 36 native 0.0 M 18.3 M 17.1 M 0.684 0.94 0.94 15.75 120 1.27 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9492386-bdde-4f87-8a04-f39faf7f5621/@@download/cross_correlation_plot/ENCFF000ZSU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209AID ENCFF000ZSU Illumina Genome Analyzer 2016-12-11T04:01:13.643004+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1651X00369KbxV61z4GFvVJ ENCSR945NFL https://www.encodeproject.org/experiments/ENCSR945NFL transcription factor USF2-human SK-N-SH immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF496YWT https://www.encodeproject.org/files/ENCFF496YWT/@@download/ENCFF496YWT.bam ENCFF437SBN https://www.encodeproject.org/files/ENCFF437SBN/@@download/ENCFF437SBN.bam 22.9 M 0 22.1 M 0.965 SE 36 36 native 0.0 M 16.7 M 16.1 M 0.702 0.96 0.96 28.87 115 1.08 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/72a8baa4-d26d-4729-9d5b-eccb2154c122/@@download/cross_correlation_plot/ENCFF002ECG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB423HXB michael-snyder:USF2_ab60931_SK-N-SH_Rep1 ENCFF002ECG Illumina Genome Analyzer IIx 2016-08-30T17:54:03.564356+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ1y80369P2yGzP5BYGyq1 ENCSR945NFL https://www.encodeproject.org/experiments/ENCSR945NFL transcription factor USF2-human SK-N-SH immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF423JON https://www.encodeproject.org/files/ENCFF423JON/@@download/ENCFF423JON.bam ENCFF079YWD https://www.encodeproject.org/files/ENCFF079YWD/@@download/ENCFF079YWD.bam 25.9 M 0 25.3 M 0.978 SE 36 36 native 0.0 M 18.7 M 18.0 M 0.695 0.96 0.96 25.57 120 1.03 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/69ccb4cd-3dcc-42e8-839f-bc68961cbc5a/@@download/cross_correlation_plot/ENCFF002ECJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB506WLR michael-snyder:USF2_ab60931_SK-N-SH_Rep2 ENCFF002ECJ Illumina Genome Analyzer IIx 2016-08-30T17:53:29.698722+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByyJ20j0369Kbz03YVBXFzxz ENCSR236WEQ https://www.encodeproject.org/experiments/ENCSR236WEQ control Control-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF908QTW https://www.encodeproject.org/files/ENCFF908QTW/@@download/ENCFF908QTW.bam ENCFF290ZXH https://www.encodeproject.org/files/ENCFF290ZXH/@@download/ENCFF290ZXH.bam 83.8 M 0 81.2 M 0.969 PE 100 100 native 35.5 M 0.0 M 31.6 M 0.753 0.89 0.89 9.03 150 1.07 5.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ce961e6-54f7-4c9e-920c-ab0f61d30500/@@download/cross_correlation_plot/ENCFF117DXVENCFF707FFD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB158AXD michael-snyder:L-3379 "ENCFF707FFD,ENCFF117DXV" HiSeq 4000 2017-03-23T18:10:24.096165+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QBy003695f604Gb788kK0 ENCSR376QKK https://www.encodeproject.org/experiments/ENCSR376QKK control Control-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF514CZN https://www.encodeproject.org/files/ENCFF514CZN/@@download/ENCFF514CZN.bam ENCFF506BDF https://www.encodeproject.org/files/ENCFF506BDF/@@download/ENCFF506BDF.bam 70.0 M 0 67.9 M 0.969 PE 100 None 29.4 M 0.0 M 28.6 M 0.816 0.97 0.97 34.57 190 1.06 3.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0a407dd-a0bb-4e98-8933-d9cdb7db5537/@@download/cross_correlation_plot/ENCFF652BCHENCFF241FJP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB954EMK michael-snyder:L-2858 "ENCFF241FJP,ENCFF652BCH" HiSeq 2000 2016-05-06T18:18:09.421611+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqG4Q036986q4kkQ2Q0KQQ ENCSR485ITK https://www.encodeproject.org/experiments/ENCSR485ITK control Control-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF811KEY https://www.encodeproject.org/files/ENCFF811KEY/@@download/ENCFF811KEY.bam ENCFF457RKG https://www.encodeproject.org/files/ENCFF457RKG/@@download/ENCFF457RKG.bam 56.6 M 0 54.9 M 0.970 PE 100 None 23.5 M 0.0 M 23.2 M 0.822 0.99 0.99 99.12 200 1.07 3.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ee91b8b-5750-43b6-9d00-9add9056797e/@@download/cross_correlation_plot/ENCFF638HYSENCFF716ODJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB951RXS michael-snyder:L-2860 "ENCFF638HYS,ENCFF716ODJ" HiSeq 2000 2016-05-06T18:17:08.114701+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqK5j036961GyjjQ2QP8Q9 ENCSR728EBP https://www.encodeproject.org/experiments/ENCSR728EBP control Control-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF702GSO https://www.encodeproject.org/files/ENCFF702GSO/@@download/ENCFF702GSO.bam ENCFF858CSQ https://www.encodeproject.org/files/ENCFF858CSQ/@@download/ENCFF858CSQ.bam 61.2 M 0 59.3 M 0.969 PE 100 None 25.6 M 0.0 M 24.7 M 0.809 0.97 0.97 28.70 190 1.08 3.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8ce66cf-f497-495a-a41a-55dc26274500/@@download/cross_correlation_plot/ENCFF347NDJENCFF360CGI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB868TAQ michael-snyder:L-2866 "ENCFF347NDJ,ENCFF360CGI" HiSeq 2000 2016-05-06T18:11:40.229261+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqY8003692Fy2Pk02vGVZX ENCSR800BRO https://www.encodeproject.org/experiments/ENCSR800BRO control Control-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF895WIL https://www.encodeproject.org/files/ENCFF895WIL/@@download/ENCFF895WIL.bam ENCFF468GAP https://www.encodeproject.org/files/ENCFF468GAP/@@download/ENCFF468GAP.bam 88.6 M 0 86.6 M 0.977 PE 100 100 native 38.4 M 0.0 M 33.8 M 0.763 0.88 0.88 8.16 150 1.07 4.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e41cf55-f9b6-427d-ba53-1f7930cd2cfc/@@download/cross_correlation_plot/ENCFF053VYXENCFF412PFB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB054LWT michael-snyder:L-3312 "ENCFF412PFB,ENCFF053VYX" HiSeq 4000 2017-03-17T16:46:31.417194+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X458036935X062JF169X9 ENCSR819SSW https://www.encodeproject.org/experiments/ENCSR819SSW control Control-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF376BTL https://www.encodeproject.org/files/ENCFF376BTL/@@download/ENCFF376BTL.bam ENCFF796VOZ https://www.encodeproject.org/files/ENCFF796VOZ/@@download/ENCFF796VOZ.bam 76.9 M 0 74.2 M 0.965 PE 100 None 32.0 M 0.0 M 31.1 M 0.808 0.97 0.97 35.64 195 1.06 2.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf39be39-9ce7-46a2-8efd-221452f9893d/@@download/cross_correlation_plot/ENCFF165UVCENCFF694VZW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB634NUX michael-snyder:L-2864 "ENCFF694VZW,ENCFF165UVC" HiSeq 2000 2016-05-06T18:10:24.857908+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqbzQ0369PPK4xgv2b79Xp ENCSR895OZW https://www.encodeproject.org/experiments/ENCSR895OZW control Control-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF157IHW https://www.encodeproject.org/files/ENCFF157IHW/@@download/ENCFF157IHW.bam ENCFF442KWM https://www.encodeproject.org/files/ENCFF442KWM/@@download/ENCFF442KWM.bam 86.7 M 0 84.6 M 0.975 PE 100 100 native 37.0 M 0.0 M 34.4 M 0.793 0.93 0.93 13.93 160 1.06 4.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/4517e93a-e1ae-4b7a-ae9b-a128deb21556/@@download/cross_correlation_plot/ENCFF135ANMENCFF473QSO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB515SWJ michael-snyder:L-3311 "ENCFF473QSO,ENCFF135ANM" HiSeq 4000 2017-03-17T16:46:49.220150+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X4F80369GG4vP2xGv00Q0 ENCSR999EPI https://www.encodeproject.org/experiments/ENCSR999EPI control Control-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF484QUN https://www.encodeproject.org/files/ENCFF484QUN/@@download/ENCFF484QUN.bam ENCFF744CPV https://www.encodeproject.org/files/ENCFF744CPV/@@download/ENCFF744CPV.bam 110.9 M 0 107.6 M 0.970 PE 100 100 native 46.6 M 0.0 M 41.6 M 0.750 0.89 0.89 9.26 140 1.05 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/295e6642-a120-4915-adde-e9c677a8da18/@@download/cross_correlation_plot/ENCFF758XTSENCFF345SUH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB400YCA michael-snyder:L-3310 "ENCFF758XTS,ENCFF345SUH" HiSeq 4000 2017-05-10T23:38:33.984838+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F49XB6j03690KPX7BzjQ1Xgy ENCSR028YEV https://www.encodeproject.org/experiments/ENCSR028YEV "transcription factor,RNA binding protein" CTCF-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF925EOE https://www.encodeproject.org/files/ENCFF925EOE/@@download/ENCFF925EOE.bam ENCFF905KCY https://www.encodeproject.org/files/ENCFF905KCY/@@download/ENCFF905KCY.bam 188.5 M 0 181.5 M 0.963 PE 100 100 native 76.3 M 0.0 M 68.3 M 0.725 0.90 0.89 9.35 210 1.46 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/456c6a4f-ba25-4b8b-bfca-5c02735657a1/@@download/cross_correlation_plot/ENCFF772IAG-ENCFF613GCH_pooledENCFF595UYF-ENCFF884DQI_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB409APT michael-snyder:L-2859 "ENCFF595UYF,ENCFF884DQI,ENCFF613GCH,ENCFF772IAG" HiSeq 2000 2016-11-15T23:51:07.244108+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bBXB80369PyvFZjj61GPbf ENCSR234HEM https://www.encodeproject.org/experiments/ENCSR234HEM "transcription factor,RNA binding protein" CTCF-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF592PPU https://www.encodeproject.org/files/ENCFF592PPU/@@download/ENCFF592PPU.bam ENCFF892VUB https://www.encodeproject.org/files/ENCFF892VUB/@@download/ENCFF892VUB.bam 56.1 M 0 54.6 M 0.974 PE 100 100 native 23.9 M 0.0 M 23.1 M 0.824 0.97 0.98 52.59 220 1.12 2.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6893b34-bdb7-49ea-b356-a88a70fdcff1/@@download/cross_correlation_plot/ENCFF232BIXENCFF010QKZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB641TAW michael-snyder:L-2857 "ENCFF010QKZ,ENCFF232BIX" HiSeq 2000 2016-11-23T06:50:00.267787+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGvPQ036973YbG98px35ZX ENCSR482PMN https://www.encodeproject.org/experiments/ENCSR482PMN "transcription factor,RNA binding protein" CTCF-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF015XKO https://www.encodeproject.org/files/ENCFF015XKO/@@download/ENCFF015XKO.bam ENCFF856JOP https://www.encodeproject.org/files/ENCFF856JOP/@@download/ENCFF856JOP.bam 52.6 M 0 50.9 M 0.966 PE 100 100 native 22.2 M 0.0 M 21.5 M 0.817 0.97 0.97 30.20 190 1.76 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/d90a70dc-8dbb-451c-9323-477a32197961/@@download/cross_correlation_plot/ENCFF024GRHENCFF542ZSP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB553FIN michael-snyder:L-2865 "ENCFF542ZSP,ENCFF024GRH" HiSeq 2000 2016-11-23T06:52:59.013944+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGkxj036957VbyJjpvQ3b6 ENCSR692ILH https://www.encodeproject.org/experiments/ENCSR692ILH "transcription factor,RNA binding protein" CTCF-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF903NKV https://www.encodeproject.org/files/ENCFF903NKV/@@download/ENCFF903NKV.bam ENCFF583IEN https://www.encodeproject.org/files/ENCFF583IEN/@@download/ENCFF583IEN.bam 73.7 M 0 71.4 M 0.968 PE 100 100 native 30.8 M 0.0 M 30.2 M 0.819 0.98 0.98 53.01 205 1.14 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/79492b82-a7a9-435f-9059-a97ccd45f2d7/@@download/cross_correlation_plot/ENCFF774SIFENCFF106TQC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB178RBF michael-snyder:L-2863 "ENCFF774SIF,ENCFF106TQC" HiSeq 2000 2016-11-23T06:54:09.776682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGv6803690vByKbGg8Jbq8 ENCSR266XFE https://www.encodeproject.org/experiments/ENCSR266XFE transcription factor POLR2A-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF067YAB https://www.encodeproject.org/files/ENCFF067YAB/@@download/ENCFF067YAB.bam ENCFF776TTY https://www.encodeproject.org/files/ENCFF776TTY/@@download/ENCFF776TTY.bam 124.5 M 0 117.6 M 0.945 PE 100 100 native 49.8 M 0.0 M 43.6 M 0.700 0.87 0.89 9.81 140 1.05 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/030c89aa-08a4-4ad2-8aca-e5fb9fe51462/@@download/cross_correlation_plot/ENCFF073GNSENCFF975DHQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB701YRS michael-snyder:L-3306 "ENCFF073GNS,ENCFF975DHQ" HiSeq 4000 2017-03-13T17:29:11.502179+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30qqg00369FG23Y0Zfvqv1j ENCSR289VTP https://www.encodeproject.org/experiments/ENCSR289VTP transcription factor POLR2A-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF069SYK https://www.encodeproject.org/files/ENCFF069SYK/@@download/ENCFF069SYK.bam ENCFF829KJH https://www.encodeproject.org/files/ENCFF829KJH/@@download/ENCFF829KJH.bam 76.7 M 0 74.5 M 0.972 PE 100 100 native 32.5 M 0.0 M 29.3 M 0.763 0.90 0.90 10.26 155 1.08 4.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/d3aa56b4-2ae2-4195-9120-008f134a2bda/@@download/cross_correlation_plot/ENCFF510UIJENCFF606RQN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB318RMY michael-snyder:L-3375 "ENCFF510UIJ,ENCFF606RQN" HiSeq 4000 2017-03-21T07:24:01.638727+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F38167j036904v482vQ3pzgJ ENCSR691CPM https://www.encodeproject.org/experiments/ENCSR691CPM transcription factor POLR2A-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF722XIO https://www.encodeproject.org/files/ENCFF722XIO/@@download/ENCFF722XIO.bam ENCFF050KRZ https://www.encodeproject.org/files/ENCFF050KRZ/@@download/ENCFF050KRZ.bam 124.6 M 0 121.8 M 0.978 PE 100 100 native 54.0 M 0.0 M 47.3 M 0.759 0.88 0.87 7.87 150 1.07 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5c81ffc-b4bc-4684-bc22-03239dae741f/@@download/cross_correlation_plot/ENCFF982FBQENCFF837IQA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB836MXJ michael-snyder:L-3308 "ENCFF837IQA,ENCFF982FBQ" HiSeq 4000 2017-03-13T17:29:14.880532+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30qqzQ03693b2Zj6Zx8v73Y ENCSR729GXE https://www.encodeproject.org/experiments/ENCSR729GXE transcription factor POLR2A-human spleen tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF244WQG https://www.encodeproject.org/files/ENCFF244WQG/@@download/ENCFF244WQG.bam ENCFF719JME https://www.encodeproject.org/files/ENCFF719JME/@@download/ENCFF719JME.bam 79.8 M 0 77.2 M 0.967 PE 100 100 native 33.5 M 0.0 M 30.6 M 0.767 0.91 0.91 11.70 140 1.07 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/02c3b68d-5e43-42ba-a9d5-f29d8f311766/@@download/cross_correlation_plot/ENCFF894LNIENCFF019BTC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB460XJC michael-snyder:L-3307 "ENCFF894LNI,ENCFF019BTC" HiSeq 4000 2017-03-13T17:26:52.225925+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F30qqP80369PY8fv0bkJpY3G ENCSR081KET https://www.encodeproject.org/experiments/ENCSR081KET control Control-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF987UNO https://www.encodeproject.org/files/ENCFF987UNO/@@download/ENCFF987UNO.bam ENCFF587KOP https://www.encodeproject.org/files/ENCFF587KOP/@@download/ENCFF587KOP.bam 53.1 M 0 51.6 M 0.973 PE 100 None 22.3 M 0.0 M 20.0 M 0.753 0.90 0.89 9.26 220 1.07 6.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/69f3c3ef-c974-4a1c-8801-99a35e0dfcfd/@@download/cross_correlation_plot/ENCFF326ENEENCFF851KCU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB906SOT michael-snyder:L-2833 "ENCFF326ENE,ENCFF851KCU" HiSeq 2000 2016-05-06T18:20:11.086502+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq61003699yV3Z4G3B3vZg ENCSR394BOP https://www.encodeproject.org/experiments/ENCSR394BOP control Control-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF607RXM https://www.encodeproject.org/files/ENCFF607RXM/@@download/ENCFF607RXM.bam ENCFF137TDM https://www.encodeproject.org/files/ENCFF137TDM/@@download/ENCFF137TDM.bam 61.5 M 0 59.2 M 0.962 PE 100 None 25.3 M 0.0 M 23.4 M 0.760 0.92 0.92 12.63 200 1.07 4.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/e78ca19f-f0be-4782-bc55-9d29308a47c6/@@download/cross_correlation_plot/ENCFF871RZYENCFF892NGP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB942PJE michael-snyder:L-2836 "ENCFF892NGP,ENCFF871RZY" HiSeq 2000 2016-05-06T18:17:21.695848+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGG803691Q4QQpZ2q8BQX ENCSR488BXS https://www.encodeproject.org/experiments/ENCSR488BXS control Control-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF709NCT https://www.encodeproject.org/files/ENCFF709NCT/@@download/ENCFF709NCT.bam ENCFF886NRA https://www.encodeproject.org/files/ENCFF886NRA/@@download/ENCFF886NRA.bam 46.8 M 0 45.6 M 0.974 PE 100 None 19.9 M 0.0 M 16.7 M 0.713 0.84 0.83 5.85 215 1.10 7.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa649b54-311a-4f65-a5d9-76ccee41fbb7/@@download/cross_correlation_plot/ENCFF857OPQENCFF453CTT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB377SDN michael-snyder:L-2839 "ENCFF857OPQ,ENCFF453CTT" HiSeq 2000 2016-05-06T18:15:18.613345+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKBj036929FJGg42Xq1z3 ENCSR955OCL https://www.encodeproject.org/experiments/ENCSR955OCL control Control-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF162JEL https://www.encodeproject.org/files/ENCFF162JEL/@@download/ENCFF162JEL.bam ENCFF982XQW https://www.encodeproject.org/files/ENCFF982XQW/@@download/ENCFF982XQW.bam 57.1 M 0 54.8 M 0.960 PE 100 None 23.5 M 0.0 M 22.4 M 0.785 0.96 0.96 22.18 200 1.07 4.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/d902c47d-4cd6-4279-98cc-1276a7a36e15/@@download/cross_correlation_plot/ENCFF702VBZENCFF048IPJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB221SCC michael-snyder:L-2842 "ENCFF702VBZ,ENCFF048IPJ" HiSeq 2000 2016-05-06T18:06:48.263240+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqk900369GkFPvq42zg200 ENCSR173AIR https://www.encodeproject.org/experiments/ENCSR173AIR "transcription factor,RNA binding protein" CTCF-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF552ZFG https://www.encodeproject.org/files/ENCFF552ZFG/@@download/ENCFF552ZFG.bam ENCFF704PKN https://www.encodeproject.org/files/ENCFF704PKN/@@download/ENCFF704PKN.bam 144.7 M 0 140.4 M 0.970 PE 100 100 native 61.2 M 0.0 M 49.6 M 0.686 0.81 0.81 4.97 215 1.13 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/00374772-81ec-45b7-876a-a4d8a878dd98/@@download/cross_correlation_plot/ENCFF042GGM-ENCFF143XEG_pooledENCFF757JXI-ENCFF040PJI_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB584SNT michael-snyder:L-2840 "ENCFF143XEG,ENCFF042GGM,ENCFF757JXI,ENCFF040PJI" HiSeq 2000 2016-11-15T23:44:09.432803+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bBXj80369PyvFZjj61GPbz ENCSR549WAU https://www.encodeproject.org/experiments/ENCSR549WAU "transcription factor,RNA binding protein" CTCF-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF374OTR https://www.encodeproject.org/files/ENCFF374OTR/@@download/ENCFF374OTR.bam ENCFF981KMS https://www.encodeproject.org/files/ENCFF981KMS/@@download/ENCFF981KMS.bam 62.1 M 0 60.4 M 0.973 PE 100 100 native 26.0 M 0.0 M 25.2 M 0.810 0.97 0.97 30.98 205 1.10 2.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/911d98a9-58cd-4dc5-adb3-e3047163b3ab/@@download/cross_correlation_plot/ENCFF643OCAENCFF658ZTF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB131MAQ michael-snyder:L-2831 "ENCFF643OCA,ENCFF658ZTF" HiSeq 2000 2016-11-23T06:48:10.057326+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGxB00369B54XZxGgBXp38 ENCSR618QYE https://www.encodeproject.org/experiments/ENCSR618QYE "transcription factor,RNA binding protein" CTCF-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF909IAW https://www.encodeproject.org/files/ENCFF909IAW/@@download/ENCFF909IAW.bam ENCFF852RUX https://www.encodeproject.org/files/ENCFF852RUX/@@download/ENCFF852RUX.bam 52.6 M 0 50.9 M 0.968 PE 100 100 native 21.9 M 0.0 M 20.7 M 0.785 0.95 0.95 18.13 240 1.07 5.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a75bce1-516f-4fdb-989b-fc9562e08bf4/@@download/cross_correlation_plot/ENCFF783HNPENCFF865CRA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB931WAR michael-snyder:L-2834 "ENCFF865CRA,ENCFF783HNP" HiSeq 2000 2016-11-23T06:52:22.532606+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGq68036957VbyJjpvQ3f5 ENCSR776AEL https://www.encodeproject.org/experiments/ENCSR776AEL "transcription factor,RNA binding protein" CTCF-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF780OIC https://www.encodeproject.org/files/ENCFF780OIC/@@download/ENCFF780OIC.bam ENCFF279PAT https://www.encodeproject.org/files/ENCFF279PAT/@@download/ENCFF279PAT.bam 50.6 M 0 49.3 M 0.975 PE 100 100 native 21.4 M 0.0 M 21.2 M 0.837 0.99 0.99 103.62 235 1.07 6.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/5940628a-966e-4966-bb47-18c4ff4c8eef/@@download/cross_correlation_plot/ENCFF372GPWENCFF881VQU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB861JIN michael-snyder:L-2837 "ENCFF881VQU,ENCFF372GPW" HiSeq 2000 2016-11-23T06:52:46.752547+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGpJ8036996p9kkx30FG45 ENCSR038YKU https://www.encodeproject.org/experiments/ENCSR038YKU transcription factor POLR2A-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF728XMR https://www.encodeproject.org/files/ENCFF728XMR/@@download/ENCFF728XMR.bam ENCFF989RHA https://www.encodeproject.org/files/ENCFF989RHA/@@download/ENCFF989RHA.bam 144.3 M 0 139.9 M 0.970 PE 100 100 native 60.8 M 0.0 M 46.3 M 0.642 0.76 0.75 3.87 220 1.04 6.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff93547e-2b6d-471b-bf2b-2536e6f6490d/@@download/cross_correlation_plot/ENCFF800XBW-ENCFF090TRF_pooledENCFF233QXS-ENCFF014FRE_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB211HTI michael-snyder:L-2841 "ENCFF233QXS,ENCFF090TRF,ENCFF014FRE,ENCFF800XBW" HiSeq 2000 2016-11-15T23:46:51.794303+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bBX4j0369PyvFZjj61GPbK ENCSR122EYE https://www.encodeproject.org/experiments/ENCSR122EYE transcription factor POLR2A-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF999KUG https://www.encodeproject.org/files/ENCFF999KUG/@@download/ENCFF999KUG.bam ENCFF661CPJ https://www.encodeproject.org/files/ENCFF661CPJ/@@download/ENCFF661CPJ.bam 69.9 M 0 67.8 M 0.970 PE 100 100 native 29.1 M 0.0 M 26.9 M 0.771 0.93 0.93 13.33 205 1.07 3.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/38a3cea7-f293-4a98-b3f4-3d4608d80520/@@download/cross_correlation_plot/ENCFF073GTFENCFF554PAM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB385RVL michael-snyder:L-2832 "ENCFF073GTF,ENCFF554PAM" HiSeq 2000 2016-11-23T06:54:09.104376+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGkj003698kY3GKbPj57pg ENCSR434MWV https://www.encodeproject.org/experiments/ENCSR434MWV transcription factor POLR2A-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF809HJM https://www.encodeproject.org/files/ENCFF809HJM/@@download/ENCFF809HJM.bam ENCFF112ZQC https://www.encodeproject.org/files/ENCFF112ZQC/@@download/ENCFF112ZQC.bam 75.9 M 0 73.5 M 0.968 PE 100 100 native 31.6 M 0.0 M 31.2 M 0.821 0.98 0.98 66.39 200 1.05 4.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/93e54936-d719-4944-be32-14415abcd568/@@download/cross_correlation_plot/ENCFF699OSQENCFF014DFT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB311BPP michael-snyder:L-2838 "ENCFF014DFT,ENCFF699OSQ" HiSeq 2000 2016-11-23T06:50:35.550834+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGvZj0369947yfvV36Jf8F ENCSR775VUA https://www.encodeproject.org/experiments/ENCSR775VUA transcription factor POLR2A-human stomach tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF895LEP https://www.encodeproject.org/files/ENCFF895LEP/@@download/ENCFF895LEP.bam ENCFF987ONO https://www.encodeproject.org/files/ENCFF987ONO/@@download/ENCFF987ONO.bam 64.8 M 0 62.4 M 0.963 PE 100 100 native 26.4 M 0.0 M 26.0 M 0.803 0.98 0.98 62.08 220 1.05 4.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/e238acaf-0fb7-4a2c-b1ca-a41391f1126e/@@download/cross_correlation_plot/ENCFF800HLEENCFF700SNB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB306BQF michael-snyder:L-2835 "ENCFF700SNB,ENCFF800HLE" HiSeq 2000 2016-11-23T06:53:50.224406+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGk7Q03693FYbx8kPqJGkZ ENCSR078CBW https://www.encodeproject.org/experiments/ENCSR078CBW control Control-human subcutaneous adipose tissue tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF667KCG https://www.encodeproject.org/files/ENCFF667KCG/@@download/ENCFF667KCG.bam ENCFF780KRA https://www.encodeproject.org/files/ENCFF780KRA/@@download/ENCFF780KRA.bam 37.3 M 0 35.9 M 0.963 PE 100 None 15.9 M 0.0 M 14.7 M 0.788 0.93 0.93 13.88 185 1.12 14.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/f829739e-bc99-438d-9378-f0f3679a99e1/@@download/cross_correlation_plot/ENCFF663SAAENCFF788LAN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB879AGN michael-snyder:L-2849 "ENCFF788LAN,ENCFF663SAA" HiSeq 2000 2016-05-06T18:16:28.322405+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq5bj03698J82bvQ2XfQZb ENCSR496OMO https://www.encodeproject.org/experiments/ENCSR496OMO control Control-human subcutaneous adipose tissue tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF354PAM https://www.encodeproject.org/files/ENCFF354PAM/@@download/ENCFF354PAM.bam ENCFF604VET https://www.encodeproject.org/files/ENCFF604VET/@@download/ENCFF604VET.bam 30.9 M 0 30.1 M 0.976 PE 100 None 13.3 M 0.0 M 12.8 M 0.830 0.97 0.97 29.02 180 1.14 20.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/b304d3a0-8ef7-4232-a67a-90bd651f8602/@@download/cross_correlation_plot/ENCFF931GEHENCFF988GJO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB759BFP michael-snyder:L-2852 "ENCFF988GJO,ENCFF931GEH" HiSeq 2000 2016-05-06T18:12:55.914700+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKV80369PPK4xgv2b799q ENCSR498VPN https://www.encodeproject.org/experiments/ENCSR498VPN control Control-human subcutaneous adipose tissue tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF546KMN https://www.encodeproject.org/files/ENCFF546KMN/@@download/ENCFF546KMN.bam ENCFF961LWZ https://www.encodeproject.org/files/ENCFF961LWZ/@@download/ENCFF961LWZ.bam 166.4 M 0 159.1 M 0.956 PE 100 None 68.6 M 0.0 M 56.5 M 0.679 0.82 0.82 5.46 175 1.04 4.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/406cc907-7809-4887-9fdf-7e490f93cfb6/@@download/cross_correlation_plot/ENCFF683TAHENCFF344PWR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB528SEP michael-snyder:L-2844 "ENCFF344PWR,ENCFF683TAH" HiSeq 4000 2016-05-06T18:21:17.990055+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKY003691Q4QQpZ2q8BY5 ENCSR740VAI https://www.encodeproject.org/experiments/ENCSR740VAI control Control-human subcutaneous adipose tissue tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF780BYU https://www.encodeproject.org/files/ENCFF780BYU/@@download/ENCFF780BYU.bam ENCFF405GGZ https://www.encodeproject.org/files/ENCFF405GGZ/@@download/ENCFF405GGZ.bam 80.3 M 0 77.8 M 0.969 PE 100 100 native 33.8 M 0.0 M 29.7 M 0.740 0.88 0.88 8.06 185 1.06 12.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/438dd78d-bf6b-4806-afbf-8e53d04cfdd8/@@download/cross_correlation_plot/ENCFF458ZVKENCFF715LSR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB759BFP michael-snyder:L-2852 "ENCFF715LSR,ENCFF458ZVK" HiSeq 4000 2016-11-02T23:14:52.607950+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Gbbf00369GjXJXPb9ZkFjg ENCSR758SCJ https://www.encodeproject.org/experiments/ENCSR758SCJ control Control-human subcutaneous adipose tissue tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF002VFN https://www.encodeproject.org/files/ENCFF002VFN/@@download/ENCFF002VFN.bam ENCFF503UOS https://www.encodeproject.org/files/ENCFF503UOS/@@download/ENCFF503UOS.bam 86.9 M 0 83.3 M 0.958 PE 100 100 native 36.6 M 0.0 M 28.4 M 0.655 0.78 0.78 4.38 195 1.06 13.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/d926eb66-0e4a-4d0c-992f-4b7b254bc2bf/@@download/cross_correlation_plot/ENCFF192COEENCFF459SYM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB879AGN michael-snyder:L-2849 "ENCFF192COE,ENCFF459SYM" HiSeq 4000 2016-12-07T18:32:07.350087+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XP1Q0369013XpJYVg61gB ENCSR830SSM https://www.encodeproject.org/experiments/ENCSR830SSM control Control-human subcutaneous adipose tissue tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF428PZQ https://www.encodeproject.org/files/ENCFF428PZQ/@@download/ENCFF428PZQ.bam ENCFF959DHM https://www.encodeproject.org/files/ENCFF959DHM/@@download/ENCFF959DHM.bam 41.4 M 0 39.7 M 0.961 PE 100 None 17.0 M 0.0 M 13.1 M 0.634 0.77 0.93 28.12 220 1.13 11.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/557cf492-b6ea-47cf-84bf-6579b3c436c6/@@download/cross_correlation_plot/ENCFF137QZIENCFF092WZJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB270HFZ michael-snyder:L-2846 "ENCFF137QZI,ENCFF092WZJ" HiSeq 2000 2016-05-06T18:05:06.971369+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqfV003690j2jgp42pQ36z ENCSR762PCG https://www.encodeproject.org/experiments/ENCSR762PCG "transcription factor,RNA binding protein" CTCF-human subcutaneous adipose tissue tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF997ZMP https://www.encodeproject.org/files/ENCFF997ZMP/@@download/ENCFF997ZMP.bam ENCFF540VML https://www.encodeproject.org/files/ENCFF540VML/@@download/ENCFF540VML.bam 34.8 M 0 33.9 M 0.974 PE 100 100 native 14.9 M 0.0 M 11.9 M 0.687 0.80 0.79 4.68 190 1.15 23.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ecd5465-5ae3-49e9-99ed-0c89988a9a9a/@@download/cross_correlation_plot/ENCFF897CNIENCFF385KCF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB911MAM michael-snyder:L-2847 "ENCFF385KCF,ENCFF897CNI" HiSeq 2000 2016-11-23T06:45:24.272802+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGvp003694Fx1V58y5Kj7f ENCSR790VEV https://www.encodeproject.org/experiments/ENCSR790VEV "transcription factor,RNA binding protein" CTCF-human subcutaneous adipose tissue tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF078USH https://www.encodeproject.org/files/ENCFF078USH/@@download/ENCFF078USH.bam ENCFF836VFS https://www.encodeproject.org/files/ENCFF836VFS/@@download/ENCFF836VFS.bam 138.9 M 0 131.7 M 0.948 PE 100 100 native 57.7 M 0.0 M 31.7 M 0.456 0.55 0.51 1.86 180 1.05 6.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d1d479d-e119-4151-aec2-b0304801bd98/@@download/cross_correlation_plot/ENCFF008NBB-ENCFF476POX_pooledENCFF808IIT-ENCFF834PKM_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB411JNA michael-snyder:L-2850 "ENCFF476POX,ENCFF834PKM,ENCFF808IIT,ENCFF008NBB" HiSeq 2000 2016-11-15T23:45:05.752707+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bBVyj0369FZF23QQ0jZx0Y ENCSR199UFW https://www.encodeproject.org/experiments/ENCSR199UFW control Control-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF468PJR https://www.encodeproject.org/files/ENCFF468PJR/@@download/ENCFF468PJR.bam ENCFF106DYM https://www.encodeproject.org/files/ENCFF106DYM/@@download/ENCFF106DYM.bam 107.2 M 0 104.3 M 0.973 PE 100 100 native 45.4 M 0.0 M 39.7 M 0.740 0.87 0.87 7.67 190 1.06 8.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a85f056-fa92-41cb-ac30-80e7ba3d3e34/@@download/cross_correlation_plot/ENCFF816SJKENCFF685NZG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB656YOW michael-snyder:L-2892 "ENCFF816SJK,ENCFF685NZG" HiSeq 4000 2016-12-07T18:35:29.730713+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XKB003691Ff3KBzJ7QZFZ ENCSR277LNZ https://www.encodeproject.org/experiments/ENCSR277LNZ control Control-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF270YLG https://www.encodeproject.org/files/ENCFF270YLG/@@download/ENCFF270YLG.bam ENCFF456CKG https://www.encodeproject.org/files/ENCFF456CKG/@@download/ENCFF456CKG.bam 51.7 M 0 50.6 M 0.979 PE 100 None 22.0 M 0.0 M 20.6 M 0.799 0.94 0.94 15.56 185 1.11 13.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/cebf44cb-5579-4f3c-99e0-de1f2b9e9e1c/@@download/cross_correlation_plot/ENCFF999MXUENCFF782FKW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB656YOW michael-snyder:L-2892 "ENCFF782FKW,ENCFF999MXU" HiSeq 2000 2016-05-06T18:16:19.377476+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqB0803691Q4QQpZ2q8BGB ENCSR308RWM https://www.encodeproject.org/experiments/ENCSR308RWM control Control-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF932XVT https://www.encodeproject.org/files/ENCFF932XVT/@@download/ENCFF932XVT.bam ENCFF281KRB https://www.encodeproject.org/files/ENCFF281KRB/@@download/ENCFF281KRB.bam 52.8 M 0 51.8 M 0.981 PE 100 None 22.8 M 0.0 M 21.9 M 0.829 0.96 0.96 23.37 190 1.10 12.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9586891-a157-46fc-baff-31e43dcbdbb6/@@download/cross_correlation_plot/ENCFF988ODFENCFF858BWI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB022DIE michael-snyder:L-2894 "ENCFF988ODF,ENCFF858BWI" HiSeq 2000 2016-05-06T18:17:38.933436+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqBZj03691Q4QQpZ2q8BJg ENCSR312YGL https://www.encodeproject.org/experiments/ENCSR312YGL control Control-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF611TZK https://www.encodeproject.org/files/ENCFF611TZK/@@download/ENCFF611TZK.bam ENCFF632VRO https://www.encodeproject.org/files/ENCFF632VRO/@@download/ENCFF632VRO.bam 105.3 M 0 102.4 M 0.973 PE 100 100 native 44.2 M 0.0 M 32.5 M 0.617 0.73 0.73 3.65 185 1.05 7.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7c2d0c4-dceb-43c7-937a-3c9280e5f48d/@@download/cross_correlation_plot/ENCFF723EDRENCFF475OEA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB771XBC michael-snyder:L-3376 "ENCFF475OEA,ENCFF723EDR" HiSeq 4000 2017-03-23T18:11:56.217450+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QB600369GvF4x8QFfJK91 ENCSR411EGZ https://www.encodeproject.org/experiments/ENCSR411EGZ control Control-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF651KAL https://www.encodeproject.org/files/ENCFF651KAL/@@download/ENCFF651KAL.bam ENCFF952LCO https://www.encodeproject.org/files/ENCFF952LCO/@@download/ENCFF952LCO.bam 85.6 M 0 83.5 M 0.975 PE 100 100 native 36.5 M 0.0 M 32.2 M 0.751 0.88 0.88 8.00 195 1.07 9.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f4e5c26-31fa-4783-bf98-99ea7fee46f3/@@download/cross_correlation_plot/ENCFF938CNGENCFF235UKQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB174FIH michael-snyder:L-2890 "ENCFF235UKQ,ENCFF938CNG" HiSeq 4000 2016-09-01T21:36:50.702768+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vkf0036937V4zjVyJ262b ENCSR475HOV https://www.encodeproject.org/experiments/ENCSR475HOV control Control-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF640GGJ https://www.encodeproject.org/files/ENCFF640GGJ/@@download/ENCFF640GGJ.bam ENCFF433PWX https://www.encodeproject.org/files/ENCFF433PWX/@@download/ENCFF433PWX.bam 84.2 M 0 81.9 M 0.972 PE 100 100 native 35.7 M 0.0 M 29.7 M 0.704 0.83 0.83 5.87 160 1.05 8.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/d106cc80-412d-4655-b3a6-e836746cc9a0/@@download/cross_correlation_plot/ENCFF347NHAENCFF027HUL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB765HPK michael-snyder:L-3377 "ENCFF347NHA,ENCFF027HUL" HiSeq 4000 2017-03-23T18:10:40.230796+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QBjj0369KkvJ93Gx5xf6g ENCSR607EOD https://www.encodeproject.org/experiments/ENCSR607EOD control Control-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF182FSP https://www.encodeproject.org/files/ENCFF182FSP/@@download/ENCFF182FSP.bam ENCFF602TNO https://www.encodeproject.org/files/ENCFF602TNO/@@download/ENCFF602TNO.bam 47.1 M 0 46.2 M 0.980 PE 100 None 20.2 M 0.0 M 18.8 M 0.799 0.93 0.93 14.08 195 1.11 12.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/51fe9103-bcda-427f-98f8-70a2315b79ac/@@download/cross_correlation_plot/ENCFF957VLEENCFF919YIJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB174FIH michael-snyder:L-2890 "ENCFF919YIJ,ENCFF957VLE" HiSeq 2000 2016-05-06T18:12:33.905243+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQYj0369GkFPvq42zg1gy ENCSR827FNU https://www.encodeproject.org/experiments/ENCSR827FNU control Control-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF016UQX https://www.encodeproject.org/files/ENCFF016UQX/@@download/ENCFF016UQX.bam ENCFF521VJP https://www.encodeproject.org/files/ENCFF521VJP/@@download/ENCFF521VJP.bam 48.8 M 0 47.9 M 0.982 PE 100 None 21.2 M 0.0 M 20.8 M 0.854 0.98 0.98 60.50 205 1.10 15.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/2adef4f3-5f94-44dd-8f78-378ac7565f4d/@@download/cross_correlation_plot/ENCFF084TFWENCFF217QHT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB258EQD michael-snyder:L-2896 "ENCFF084TFW,ENCFF217QHT" HiSeq 2000 2016-05-06T18:06:59.729218+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqf7Q03692Fy2Pk02vGVgB ENCSR038FOS https://www.encodeproject.org/experiments/ENCSR038FOS "transcription factor,RNA binding protein" CTCF-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF024ELD https://www.encodeproject.org/files/ENCFF024ELD/@@download/ENCFF024ELD.bam ENCFF445AON https://www.encodeproject.org/files/ENCFF445AON/@@download/ENCFF445AON.bam 47.9 M 0 46.2 M 0.965 PE 100 100 native 20.0 M 0.0 M 15.5 M 0.649 0.78 0.77 4.23 175 1.12 6.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a100602-0f01-4b5e-b9ad-a9ab0fe241c6/@@download/cross_correlation_plot/ENCFF831BTDENCFF975DXM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB297ZYB michael-snyder:L-2889 "ENCFF831BTD,ENCFF975DXM" HiSeq 2000 2016-11-23T06:46:14.265137+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGvzQ03699bpX3v0Q20ybb ENCSR515LRI https://www.encodeproject.org/experiments/ENCSR515LRI "transcription factor,RNA binding protein" CTCF-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF530VNF https://www.encodeproject.org/files/ENCFF530VNF/@@download/ENCFF530VNF.bam ENCFF020USS https://www.encodeproject.org/files/ENCFF020USS/@@download/ENCFF020USS.bam 141.5 M 0 138.2 M 0.976 PE 100 100 native 60.6 M 0.0 M 28.0 M 0.396 0.46 0.41 1.47 195 1.07 9.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/32c5aed4-fa39-4fff-95df-d89e1af591fe/@@download/cross_correlation_plot/ENCFF549IAN-ENCFF873YZS_pooledENCFF028GGC-ENCFF235XFK_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB266NXL michael-snyder:L-2893 "ENCFF873YZS,ENCFF549IAN,ENCFF028GGC,ENCFF235XFK" HiSeq 2000 2016-11-15T23:45:12.896911+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bBVfQ03690VBK7Zv5vZxbP ENCSR756KRS https://www.encodeproject.org/experiments/ENCSR756KRS "transcription factor,RNA binding protein" CTCF-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF256UVH https://www.encodeproject.org/files/ENCFF256UVH/@@download/ENCFF256UVH.bam ENCFF116AYG https://www.encodeproject.org/files/ENCFF116AYG/@@download/ENCFF116AYG.bam 161.1 M 0 157.7 M 0.979 PE 100 100 native 69.2 M 0.0 M 45.2 M 0.561 0.65 0.63 2.50 190 1.06 3.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ae51703-66e9-4916-86a1-72c2dd29b638/@@download/cross_correlation_plot/ENCFF585OIE-ENCFF047AKE_pooledENCFF275CUA-ENCFF632BHK_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB390KJG michael-snyder:L-2895 "ENCFF585OIE,ENCFF275CUA,ENCFF632BHK,ENCFF047AKE" HiSeq 2000 2016-11-15T23:50:33.956534+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bBVV00369FfP54JvFgv49v ENCSR025ZZA https://www.encodeproject.org/experiments/ENCSR025ZZA transcription factor POLR2A-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF421ZNL https://www.encodeproject.org/files/ENCFF421ZNL/@@download/ENCFF421ZNL.bam ENCFF138YYG https://www.encodeproject.org/files/ENCFF138YYG/@@download/ENCFF138YYG.bam 117.2 M 0 113.2 M 0.966 PE 100 100 native 49.4 M 0.0 M 28.6 M 0.489 0.58 0.56 2.15 185 1.09 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/64e9699e-97f0-495e-9118-04020ab3fe25/@@download/cross_correlation_plot/ENCFF310UBWENCFF834BMO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB490MIP michael-snyder:L-3373 "ENCFF834BMO,ENCFF310UBW" HiSeq 4000 2017-03-21T07:24:49.394155+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3816VQ03697qxGJPZB19QQP ENCSR825RBI https://www.encodeproject.org/experiments/ENCSR825RBI transcription factor POLR2A-human suprapubic skin tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF026KBE https://www.encodeproject.org/files/ENCFF026KBE/@@download/ENCFF026KBE.bam ENCFF580CPN https://www.encodeproject.org/files/ENCFF580CPN/@@download/ENCFF580CPN.bam 91.5 M 0 87.3 M 0.954 PE 100 100 native 38.3 M 0.0 M 22.6 M 0.493 0.59 0.57 2.18 165 1.07 5.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/3602d964-dee7-4ec1-8852-69b8f192cf25/@@download/cross_correlation_plot/ENCFF706ERCENCFF797OQU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB819DPO michael-snyder:L-3372 "ENCFF706ERC,ENCFF797OQU" HiSeq 4000 2017-03-21T07:23:10.906626+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F38172j0369JbZGZPZkz1ZZQ ENCSR036LUN https://www.encodeproject.org/experiments/ENCSR036LUN control Control-human testis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF951HNT https://www.encodeproject.org/files/ENCFF951HNT/@@download/ENCFF951HNT.bam ENCFF758BPU https://www.encodeproject.org/files/ENCFF758BPU/@@download/ENCFF758BPU.bam 96.6 M 0 94.3 M 0.976 PE 100 100 native 41.0 M 0.0 M 35.8 M 0.740 0.87 0.91 13.22 165 1.05 6.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/52409e51-9e17-4098-aec2-f55c3d6e2bc6/@@download/cross_correlation_plot/ENCFF104PILENCFF862OLB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB573RXN michael-snyder:L-3163 "ENCFF104PIL,ENCFF862OLB" HiSeq 4000 2016-12-10T04:06:02.748346+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qjz803698j1Pf95Q52kxX ENCSR953MEE https://www.encodeproject.org/experiments/ENCSR953MEE control Control-human testis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF820JHF https://www.encodeproject.org/files/ENCFF820JHF/@@download/ENCFF820JHF.bam ENCFF967HQU https://www.encodeproject.org/files/ENCFF967HQU/@@download/ENCFF967HQU.bam 100.1 M 0 97.0 M 0.969 PE 100 100 native 41.9 M 0.0 M 33.0 M 0.659 0.79 0.79 4.71 160 1.06 3.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee3afc62-9d85-41d0-9ff3-a29decd8d7de/@@download/cross_correlation_plot/ENCFF196TAEENCFF270OHP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB399CET michael-snyder:L-3209 "ENCFF270OHP,ENCFF196TAE" HiSeq 4000 2017-01-27T06:31:41.032112+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Qj80369Fj1jXFYqzqzBy ENCSR494TNM https://www.encodeproject.org/experiments/ENCSR494TNM "transcription factor,RNA binding protein" CTCF-human testis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF232BJL https://www.encodeproject.org/files/ENCFF232BJL/@@download/ENCFF232BJL.bam ENCFF447DVZ https://www.encodeproject.org/files/ENCFF447DVZ/@@download/ENCFF447DVZ.bam 77.1 M 0 74.7 M 0.969 PE 100 100 native 32.5 M 0.0 M 28.0 M 0.726 0.86 0.86 7.03 195 1.11 3.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a614b0e-8e9d-4b65-b77b-77e1e31227dc/@@download/cross_correlation_plot/ENCFF966BYUENCFF838NDW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB045MCC michael-snyder:L-3169 "ENCFF838NDW,ENCFF966BYU" HiSeq 4000 2016-12-10T03:17:41.350893+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15V00j0369B6ZyvJ8yKQKVY ENCSR981CID https://www.encodeproject.org/experiments/ENCSR981CID "transcription factor,RNA binding protein" CTCF-human testis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF642ALB https://www.encodeproject.org/files/ENCFF642ALB/@@download/ENCFF642ALB.bam ENCFF914XOX https://www.encodeproject.org/files/ENCFF914XOX/@@download/ENCFF914XOX.bam 92.7 M 0 89.9 M 0.970 PE 100 100 native 39.4 M 0.0 M 27.3 M 0.590 0.69 0.69 3.16 150 1.25 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5feac17-a06a-47c0-a279-bdf6ee7a6fdd/@@download/cross_correlation_plot/ENCFF873BBZENCFF670ONL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB924BTK michael-snyder:L-3208 "ENCFF670ONL,ENCFF873BBZ" HiSeq 4000 2017-01-27T06:30:16.442752+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Qx0036958ZB25bBz7zP9 ENCSR803FAP https://www.encodeproject.org/experiments/ENCSR803FAP transcription factor POLR2A-human testis tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF218YRX https://www.encodeproject.org/files/ENCFF218YRX/@@download/ENCFF218YRX.bam ENCFF566MXI https://www.encodeproject.org/files/ENCFF566MXI/@@download/ENCFF566MXI.bam 86.3 M 0 84.3 M 0.977 PE 100 100 native 36.8 M 0.0 M 29.2 M 0.676 0.79 0.79 4.69 150 1.06 4.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa1490fe-7fb4-4af0-b995-69c445364b15/@@download/cross_correlation_plot/ENCFF788VTVENCFF768RJW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB723UXX michael-snyder:L-3256 "ENCFF768RJW,ENCFF788VTV" HiSeq 4000 2017-01-27T06:25:01.687460+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Z7j03698y6Zj14fG2qvP ENCSR211SZD https://www.encodeproject.org/experiments/ENCSR211SZD control Control-human thoracic aorta tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF860LUC https://www.encodeproject.org/files/ENCFF860LUC/@@download/ENCFF860LUC.bam ENCFF622TLT https://www.encodeproject.org/files/ENCFF622TLT/@@download/ENCFF622TLT.bam 50.9 M 0 49.3 M 0.967 PE 100 100 native 21.3 M 0.0 M 19.1 M 0.749 0.90 0.90 9.55 225 1.07 4.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/97ed7f48-e581-48d1-9ddf-678c6e5463a2/@@download/cross_correlation_plot/ENCFF211XMOENCFF102EWP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB067UYE michael-snyder:L-2090 "ENCFF211XMO,ENCFF102EWP" HiSeq 2000 2016-10-27T22:27:54.640699+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bbKQ0369BX1xqb1B80vJ8 ENCSR328FQB https://www.encodeproject.org/experiments/ENCSR328FQB control Control-human thoracic aorta tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF393SBS https://www.encodeproject.org/files/ENCFF393SBS/@@download/ENCFF393SBS.bam ENCFF545LXI https://www.encodeproject.org/files/ENCFF545LXI/@@download/ENCFF545LXI.bam 195.9 M 0 186.7 M 0.953 PE 100 100 native 79.2 M 0.0 M 72.8 M 0.743 0.92 0.92 12.78 210 1.03 3.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a45ec76-2097-43d1-b215-c5573cdd9b99/@@download/cross_correlation_plot/ENCFF060UJV-ENCFF640ALF_pooledENCFF748BIS-ENCFF626NFD_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB265HMI,ENCLB887NVI" "michael-snyder:L-2053,michael-snyder:L-2054" "ENCFF748BIS,ENCFF626NFD,ENCFF060UJV,ENCFF640ALF" HiSeq 4000 2016-11-02T23:18:52.126970+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Gbgb0036943vz6fkqFkkPk ENCSR668BTN https://www.encodeproject.org/experiments/ENCSR668BTN "transcription factor,RNA binding protein" CTCF-human thoracic aorta tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF970KZJ https://www.encodeproject.org/files/ENCFF970KZJ/@@download/ENCFF970KZJ.bam ENCFF015FWU https://www.encodeproject.org/files/ENCFF015FWU/@@download/ENCFF015FWU.bam 250.7 M 0 207.3 M 0.827 PE 100 100 native 89.4 M 0.0 M 37.6 M 0.300 0.42 0.41 1.60 210 1.51 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe6c0c11-86f1-4599-abb1-3f138dd14e31/@@download/cross_correlation_plot/ENCFF937YTY-ENCFF543XYT_pooledENCFF031DNI-ENCFF184VEG_pooled.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf "ENCLB115UAH,ENCLB432SKR" "michael-snyder:L-1947,michael-snyder:L-1949" "ENCFF937YTY,ENCFF184VEG,ENCFF543XYT,ENCFF031DNI" HiSeq 4000 2016-11-02T23:20:57.379683+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GbG5Q0369BvVj784p8g64J ENCSR144QLB https://www.encodeproject.org/experiments/ENCSR144QLB control Control-human thyroid gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF700NXF https://www.encodeproject.org/files/ENCFF700NXF/@@download/ENCFF700NXF.bam ENCFF766ZDT https://www.encodeproject.org/files/ENCFF766ZDT/@@download/ENCFF766ZDT.bam 81.9 M 0 80.5 M 0.983 PE 100 100 native 35.6 M 0.0 M 32.4 M 0.791 0.91 0.91 10.96 195 1.07 5.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/604aa8dd-ea5b-417c-b12f-da47ee66fa6b/@@download/cross_correlation_plot/ENCFF032ITDENCFF459DWM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB749QTV michael-snyder:L-3160 "ENCFF459DWM,ENCFF032ITD" HiSeq 4000 2016-12-10T03:18:29.890737+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QpBQ03695v47P6433J97y ENCSR611RVL https://www.encodeproject.org/experiments/ENCSR611RVL control Control-human thyroid gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF797ERZ https://www.encodeproject.org/files/ENCFF797ERZ/@@download/ENCFF797ERZ.bam ENCFF291NTA https://www.encodeproject.org/files/ENCFF291NTA/@@download/ENCFF291NTA.bam 118.0 M 0 115.6 M 0.980 PE 100 100 native 51.2 M 0.0 M 36.1 M 0.611 0.70 0.70 3.32 175 1.06 4.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/16478321-0918-4577-8f9b-9ba750677f09/@@download/cross_correlation_plot/ENCFF229TOUENCFF546DKA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB847NCX michael-snyder:L-3211 "ENCFF229TOU,ENCFF546DKA" HiSeq 4000 2017-01-27T06:32:08.976629+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Q480369427Z866b6VXzK ENCSR975JIE https://www.encodeproject.org/experiments/ENCSR975JIE control Control-human thyroid gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF209HOO https://www.encodeproject.org/files/ENCFF209HOO/@@download/ENCFF209HOO.bam ENCFF422HMH https://www.encodeproject.org/files/ENCFF422HMH/@@download/ENCFF422HMH.bam 67.3 M 0 65.6 M 0.975 PE 100 100 native 28.5 M 0.0 M 27.2 M 0.807 0.95 0.95 20.75 210 1.05 3.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/0398c3d1-0690-486c-9e78-800a47b308a7/@@download/cross_correlation_plot/ENCFF179UPLENCFF121PRL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB734CFY michael-snyder:L-2091 "ENCFF179UPL,ENCFF121PRL" HiSeq 2000 2016-10-27T22:16:06.869339+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08f0180369GJ6xQfbB7F646 ENCSR492ZIW https://www.encodeproject.org/experiments/ENCSR492ZIW "transcription factor,RNA binding protein" CTCF-human thyroid gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF867AMO https://www.encodeproject.org/files/ENCFF867AMO/@@download/ENCFF867AMO.bam ENCFF619BBY https://www.encodeproject.org/files/ENCFF619BBY/@@download/ENCFF619BBY.bam 50.5 M 0 48.5 M 0.959 PE 100 100 native 21.5 M 0.0 M 19.9 M 0.788 0.93 0.93 13.49 220 1.90 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/75423043-79f1-4e2c-a7ed-12397e269bef/@@download/cross_correlation_plot/ENCFF095HAZENCFF588VLV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB371YCO michael-snyder:L-2086 "ENCFF095HAZ,ENCFF588VLV" HiSeq 2000 2016-10-27T22:22:38.357734+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bkpQ036923z1QYVBPp82b ENCSR744YJR https://www.encodeproject.org/experiments/ENCSR744YJR "transcription factor,RNA binding protein" CTCF-human thyroid gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF686NWU https://www.encodeproject.org/files/ENCFF686NWU/@@download/ENCFF686NWU.bam ENCFF815WDC https://www.encodeproject.org/files/ENCFF815WDC/@@download/ENCFF815WDC.bam 83.9 M 0 81.6 M 0.973 PE 100 100 native 36.0 M 0.0 M 27.5 M 0.654 0.76 0.76 4.17 160 1.26 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/3937803e-a8bb-4c96-9d72-4e5f77cbac74/@@download/cross_correlation_plot/ENCFF196SPGENCFF506HHD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB140TEI michael-snyder:L-3210 "ENCFF506HHD,ENCFF196SPG" HiSeq 4000 2017-01-27T06:30:34.767227+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Q9003695Q259664kQkQ0 ENCSR955BIB https://www.encodeproject.org/experiments/ENCSR955BIB "transcription factor,RNA binding protein" CTCF-human thyroid gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF578UPT https://www.encodeproject.org/files/ENCFF578UPT/@@download/ENCFF578UPT.bam ENCFF400HPP https://www.encodeproject.org/files/ENCFF400HPP/@@download/ENCFF400HPP.bam 82.7 M 0 80.5 M 0.973 PE 100 100 native 36.0 M 0.0 M 31.4 M 0.759 0.87 0.87 7.61 175 1.99 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c773f25-7085-4a6b-b891-f0a1311f0274/@@download/cross_correlation_plot/ENCFF202MPSENCFF153BBD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB684RNA michael-snyder:L-3166 "ENCFF153BBD,ENCFF202MPS" HiSeq 4000 2016-12-10T03:17:02.252897+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qygj0369GZq2777778XJy ENCSR432GAO https://www.encodeproject.org/experiments/ENCSR432GAO transcription factor POLR2A-human thyroid gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF308XAR https://www.encodeproject.org/files/ENCFF308XAR/@@download/ENCFF308XAR.bam ENCFF746SEG https://www.encodeproject.org/files/ENCFF746SEG/@@download/ENCFF746SEG.bam 85.6 M 0 82.1 M 0.959 PE 100 100 native 37.1 M 0.0 M 31.1 M 0.726 0.84 0.83 5.98 180 2.22 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0ca2550-e5b9-4fec-b723-7588514dc6cc/@@download/cross_correlation_plot/ENCFF757IXDENCFF643EOI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB610BTA michael-snyder:L-3315 "ENCFF643EOI,ENCFF757IXD" HiSeq 4000 2017-03-21T07:27:30.182304+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3814480369PbZvGJgvgYJGF ENCSR485BEB https://www.encodeproject.org/experiments/ENCSR485BEB transcription factor POLR2A-human thyroid gland tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF431RRC https://www.encodeproject.org/files/ENCFF431RRC/@@download/ENCFF431RRC.bam ENCFF828EMQ https://www.encodeproject.org/files/ENCFF828EMQ/@@download/ENCFF828EMQ.bam 121.5 M 0 118.9 M 0.978 PE 100 100 native 53.5 M 0.0 M 41.8 M 0.688 0.78 0.78 4.48 155 1.06 4.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d244828-0075-4767-ae62-17b503054a3c/@@download/cross_correlation_plot/ENCFF536HLBENCFF669LRI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB172IPX michael-snyder:L-3257 "ENCFF536HLB,ENCFF669LRI" HiSeq 4000 2017-01-27T06:26:27.116311+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Z2Q03697kzvVJ0zQF38F ENCSR405DOJ https://www.encodeproject.org/experiments/ENCSR405DOJ control Control-human tibial artery tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF788IDQ https://www.encodeproject.org/files/ENCFF788IDQ/@@download/ENCFF788IDQ.bam ENCFF535OAY https://www.encodeproject.org/files/ENCFF535OAY/@@download/ENCFF535OAY.bam 96.8 M 0 93.9 M 0.970 PE 100 100 native 40.2 M 0.0 M 29.4 M 0.607 0.73 0.73 3.60 195 1.06 8.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/8227e518-98ce-487e-a7c7-0c24dba25672/@@download/cross_correlation_plot/ENCFF843TASENCFF136QKF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB077XHW michael-snyder:L-3282 "ENCFF843TAS,ENCFF136QKF" HiSeq 4000 2017-02-07T19:24:02.053397+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GFgVQ0369BG639BVQz0g9g ENCSR699BEK https://www.encodeproject.org/experiments/ENCSR699BEK "transcription factor,RNA binding protein" CTCF-human tibial artery tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF570KCI https://www.encodeproject.org/files/ENCFF570KCI/@@download/ENCFF570KCI.bam ENCFF183ETF https://www.encodeproject.org/files/ENCFF183ETF/@@download/ENCFF183ETF.bam 104.2 M 0 93.1 M 0.893 PE 100 100 native 40.3 M 0.0 M 21.2 M 0.406 0.53 0.50 1.90 175 1.65 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc4b5cd4-eeb1-4b7b-bd67-de44ea401c63/@@download/cross_correlation_plot/ENCFF407EQPENCFF406IUD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB084VJE michael-snyder:L-3278 "ENCFF406IUD,ENCFF407EQP" HiSeq 4000 2017-02-04T22:08:11.818683+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVxKj03698Y174Fz56XY8Z ENCSR004FGW https://www.encodeproject.org/experiments/ENCSR004FGW control Control-human tibial nerve tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF987CPP https://www.encodeproject.org/files/ENCFF987CPP/@@download/ENCFF987CPP.bam ENCFF702ZGG https://www.encodeproject.org/files/ENCFF702ZGG/@@download/ENCFF702ZGG.bam 120.5 M 0 116.2 M 0.965 PE 100 100 native 50.7 M 0.0 M 41.4 M 0.687 0.82 0.81 5.31 155 1.05 4.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/798def06-1126-4faa-b123-06665e801a78/@@download/cross_correlation_plot/ENCFF992BQYENCFF709DOA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB703LVA michael-snyder:L-3195 "ENCFF992BQY,ENCFF709DOA" HiSeq 4000 2016-12-10T05:21:56.330497+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15QqFQ0369PJ8BP63qf180Q ENCSR396WMW https://www.encodeproject.org/experiments/ENCSR396WMW control Control-human tibial nerve tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF129ZFR https://www.encodeproject.org/files/ENCFF129ZFR/@@download/ENCFF129ZFR.bam ENCFF760XJH https://www.encodeproject.org/files/ENCFF760XJH/@@download/ENCFF760XJH.bam 81.9 M 0 78.7 M 0.961 PE 100 100 native 34.0 M 0.0 M 31.1 M 0.761 0.92 0.92 11.72 195 1.06 5.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/26ba3b3b-b4f8-48ee-bf31-29b8d2fdadf9/@@download/cross_correlation_plot/ENCFF060AIJENCFF736ADI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB720HYP michael-snyder:L-3155 "ENCFF060AIJ,ENCFF736ADI" HiSeq 4000 2016-12-07T18:38:51.942261+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XGB8036953GQ27qgf59XY ENCSR510GIX https://www.encodeproject.org/experiments/ENCSR510GIX control Control-human tibial nerve tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF679CSN https://www.encodeproject.org/files/ENCFF679CSN/@@download/ENCFF679CSN.bam ENCFF419VCC https://www.encodeproject.org/files/ENCFF419VCC/@@download/ENCFF419VCC.bam 107.0 M 0 103.4 M 0.966 PE 100 100 native 45.5 M 0.0 M 30.0 M 0.561 0.66 0.65 2.74 155 1.05 4.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a314212-a9cb-465e-b8b9-74566b4242ad/@@download/cross_correlation_plot/ENCFF320GMXENCFF493QSZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB675VLJ michael-snyder:L-3378 "ENCFF320GMX,ENCFF493QSZ" HiSeq 4000 2017-03-23T18:10:53.777567+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QBJQ0369PQ80P3FzzvB3v ENCSR522PLW https://www.encodeproject.org/experiments/ENCSR522PLW control Control-human tibial nerve tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF787VGS https://www.encodeproject.org/files/ENCFF787VGS/@@download/ENCFF787VGS.bam ENCFF613SFY https://www.encodeproject.org/files/ENCFF613SFY/@@download/ENCFF613SFY.bam 79.7 M 0 77.8 M 0.976 PE 100 100 native 34.0 M 0.0 M 27.6 M 0.692 0.81 0.81 5.14 185 1.06 8.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/03c8c198-72ca-4142-a3c7-71f6c9c743b4/@@download/cross_correlation_plot/ENCFF269BZNENCFF154FXE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB281MCL michael-snyder:L-3324 "ENCFF269BZN,ENCFF154FXE" HiSeq 4000 2017-03-23T18:08:41.281399+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QG88036976fyYFVb6z2pZ ENCSR999DEZ https://www.encodeproject.org/experiments/ENCSR999DEZ control Control-human tibial nerve tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF804BRR https://www.encodeproject.org/files/ENCFF804BRR/@@download/ENCFF804BRR.bam ENCFF044AZM https://www.encodeproject.org/files/ENCFF044AZM/@@download/ENCFF044AZM.bam 97.4 M 0 92.4 M 0.949 PE 100 100 native 40.0 M 0.0 M 37.4 M 0.768 0.93 0.93 15.24 175 1.06 4.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/6894a479-ecba-4818-aaa3-3ab06082d711/@@download/cross_correlation_plot/ENCFF561JARENCFF174XNW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB717LHN michael-snyder:L-3154 "ENCFF174XNW,ENCFF561JAR" HiSeq 4000 2016-12-07T18:39:38.990477+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XGQ00369BbP997qXg6KXK ENCSR434XLP https://www.encodeproject.org/experiments/ENCSR434XLP "transcription factor,RNA binding protein" CTCF-human tibial nerve tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF874SPI https://www.encodeproject.org/files/ENCFF874SPI/@@download/ENCFF874SPI.bam ENCFF983OQB https://www.encodeproject.org/files/ENCFF983OQB/@@download/ENCFF983OQB.bam 76.4 M 0 64.9 M 0.849 PE 100 100 native 28.5 M 0.0 M 19.6 M 0.512 0.69 0.67 2.90 185 1.54 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0cffc08-9c15-4fd2-a6dc-d1fe2549ea86/@@download/cross_correlation_plot/ENCFF745FWKENCFF915DUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB534BQL michael-snyder:L-3202 "ENCFF745FWK,ENCFF915DUI" HiSeq 4000 2016-12-10T02:09:51.412638+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15V0Qj03695zJkyP3F88yb4 ENCSR469POZ https://www.encodeproject.org/experiments/ENCSR469POZ "transcription factor,RNA binding protein" CTCF-human tibial nerve tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF599CGM https://www.encodeproject.org/files/ENCFF599CGM/@@download/ENCFF599CGM.bam ENCFF478WFF https://www.encodeproject.org/files/ENCFF478WFF/@@download/ENCFF478WFF.bam 107.7 M 0 87.2 M 0.810 PE 100 100 native 38.0 M 0.0 M 28.5 M 0.529 0.75 0.75 3.90 190 1.39 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/391c6ad2-9e0b-42dc-8acc-63b80725d533/@@download/cross_correlation_plot/ENCFF741YBVENCFF746OCB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB769ICA michael-snyder:L-3156 "ENCFF741YBV,ENCFF746OCB" HiSeq 4000 2016-12-07T18:33:02.914292+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XP900369BPkqZ599YJFFb ENCSR822PJT https://www.encodeproject.org/experiments/ENCSR822PJT "transcription factor,RNA binding protein" CTCF-human tibial nerve tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF809BGD https://www.encodeproject.org/files/ENCFF809BGD/@@download/ENCFF809BGD.bam ENCFF699AKH https://www.encodeproject.org/files/ENCFF699AKH/@@download/ENCFF699AKH.bam 108.6 M 0 80.4 M 0.741 PE 100 100 native 35.4 M 0.0 M 24.1 M 0.445 0.68 0.68 3.05 190 1.90 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e4b1092-d6cd-49d2-aa31-b260989fd0e7/@@download/cross_correlation_plot/ENCFF151IHTENCFF592DVR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB111TTL michael-snyder:L-3157 "ENCFF151IHT,ENCFF592DVR" HiSeq 4000 2016-12-07T18:38:37.029337+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XG2Q03694pQGq7q2y5vXb ENCSR154GUK https://www.encodeproject.org/experiments/ENCSR154GUK transcription factor POLR2A-human tibial nerve tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF979WLX https://www.encodeproject.org/files/ENCFF979WLX/@@download/ENCFF979WLX.bam ENCFF230HMY https://www.encodeproject.org/files/ENCFF230HMY/@@download/ENCFF230HMY.bam 80.3 M 0 76.2 M 0.948 PE 100 100 native 33.6 M 0.0 M 21.7 M 0.541 0.65 0.63 2.57 185 1.37 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/25d00c44-0a75-4486-8715-2069697054ff/@@download/cross_correlation_plot/ENCFF556MUXENCFF672XQY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB072TCM michael-snyder:L-3374 "ENCFF556MUX,ENCFF672XQY" HiSeq 4000 2017-03-21T07:22:53.355410+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3816yj03697F1zxK1VYjfx8 ENCSR935XOT https://www.encodeproject.org/experiments/ENCSR935XOT transcription factor POLR2A-human tibial nerve tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF692BVS https://www.encodeproject.org/files/ENCFF692BVS/@@download/ENCFF692BVS.bam ENCFF942JLD https://www.encodeproject.org/files/ENCFF942JLD/@@download/ENCFF942JLD.bam 88.6 M 0 85.4 M 0.964 PE 100 100 native 37.2 M 0.0 M 21.5 M 0.485 0.58 0.56 2.16 190 1.11 3.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/167d4893-af6f-4980-aa6e-1decbfa7bdf7/@@download/cross_correlation_plot/ENCFF732EAGENCFF807YBJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB746SDR michael-snyder:L-3318 "ENCFF732EAG,ENCFF807YBJ" HiSeq 4000 2017-03-21T07:27:43.607666+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3814GQ03691FjyPPZK0F4v0 ENCSR009MWG https://www.encodeproject.org/experiments/ENCSR009MWG control Control-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF602FBL https://www.encodeproject.org/files/ENCFF602FBL/@@download/ENCFF602FBL.bam ENCFF023WHT https://www.encodeproject.org/files/ENCFF023WHT/@@download/ENCFF023WHT.bam 112.0 M 0 107.7 M 0.962 PE 100 None 46.8 M 0.0 M 33.4 M 0.596 0.71 0.71 3.40 230 1.05 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/a015b642-3d2f-443c-b76c-b7ed34db1843/@@download/cross_correlation_plot/ENCFF723TPEENCFF896VYC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB620SYW michael-snyder:L-2977 "ENCFF723TPE,ENCFF896VYC" HiSeq 4000 2016-05-06T18:20:17.811581+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq4gj03691v3FJZQ2b2kZ1 ENCSR457NQR https://www.encodeproject.org/experiments/ENCSR457NQR control Control-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF752HGK https://www.encodeproject.org/files/ENCFF752HGK/@@download/ENCFF752HGK.bam ENCFF224CTU https://www.encodeproject.org/files/ENCFF224CTU/@@download/ENCFF224CTU.bam 33.3 M 0 32.2 M 0.967 PE 100 None 14.2 M 0.0 M 13.4 M 0.808 0.95 0.95 19.01 205 1.10 5.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ed9db40-5e7a-409d-82ac-7690c30d77e0/@@download/cross_correlation_plot/ENCFF805UIJENCFF333IGR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB735ELM michael-snyder:L-2824 "ENCFF805UIJ,ENCFF333IGR" HiSeq 2000 2016-05-06T18:13:46.807443+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqJQ003691Q4QQpZ2q8BX2 ENCSR567EKU https://www.encodeproject.org/experiments/ENCSR567EKU control Control-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF418LUT https://www.encodeproject.org/files/ENCFF418LUT/@@download/ENCFF418LUT.bam ENCFF520IRT https://www.encodeproject.org/files/ENCFF520IRT/@@download/ENCFF520IRT.bam 36.7 M 0 35.5 M 0.969 PE 100 None 15.7 M 0.0 M 14.8 M 0.807 0.94 0.94 16.93 200 1.10 5.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/4968ad98-0c02-4a02-94b1-441117fe5aa3/@@download/cross_correlation_plot/ENCFF775XBQENCFF511JSA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB821YPN michael-snyder:L-2821 "ENCFF511JSA,ENCFF775XBQ" HiSeq 2000 2016-05-06T18:12:20.371219+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqPb80369PPK4xgv2b79F3 ENCSR799YAO https://www.encodeproject.org/experiments/ENCSR799YAO control Control-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF512QNP https://www.encodeproject.org/files/ENCFF512QNP/@@download/ENCFF512QNP.bam ENCFF017BHJ https://www.encodeproject.org/files/ENCFF017BHJ/@@download/ENCFF017BHJ.bam 125.1 M 0 118.6 M 0.948 PE 100 None 51.3 M 0.0 M 41.2 M 0.658 0.80 0.80 4.98 220 1.04 3.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b520390-13c7-46cb-bb46-55660f678072/@@download/cross_correlation_plot/ENCFF313OIFENCFF646GDJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB019TTF michael-snyder:L-2818 "ENCFF646GDJ,ENCFF313OIF" HiSeq 4000 2016-05-06T18:09:11.742000+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqb8Q0369PPK4xgv2b79X0 ENCSR102CSD https://www.encodeproject.org/experiments/ENCSR102CSD "transcription factor,RNA binding protein" CTCF-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF548GPB https://www.encodeproject.org/files/ENCFF548GPB/@@download/ENCFF548GPB.bam ENCFF805JYZ https://www.encodeproject.org/files/ENCFF805JYZ/@@download/ENCFF805JYZ.bam 116.8 M 0 90.6 M 0.775 PE 100 100 native 40.0 M 0.0 M 32.2 M 0.552 0.81 0.80 5.05 225 1.62 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/5db05b37-99a5-4276-b6a4-b3aa963a5d14/@@download/cross_correlation_plot/ENCFF844CHOENCFF422HJD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB783BRJ michael-snyder:L-2809 "ENCFF422HJD,ENCFF844CHO" HiSeq 4000 2016-09-01T21:38:07.226960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VkJQ03693J600yky6f5y9 ENCSR558HTE https://www.encodeproject.org/experiments/ENCSR558HTE "transcription factor,RNA binding protein" CTCF-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF604JZN https://www.encodeproject.org/files/ENCFF604JZN/@@download/ENCFF604JZN.bam ENCFF025CMC https://www.encodeproject.org/files/ENCFF025CMC/@@download/ENCFF025CMC.bam 31.4 M 0 29.4 M 0.937 PE 100 100 native 13.0 M 0.0 M 12.4 M 0.791 0.96 0.96 22.85 230 1.11 5.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/4513ca71-2526-4bd7-ba5d-ea2bb3c2d1e6/@@download/cross_correlation_plot/ENCFF422OJZENCFF342VAQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB787SFB michael-snyder:L-2822 "ENCFF342VAQ,ENCFF422OJZ" HiSeq 2000 2016-11-23T06:50:50.573442+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGkJ0036990xY7bkG0xz1P ENCSR769WKR https://www.encodeproject.org/experiments/ENCSR769WKR "transcription factor,RNA binding protein" CTCF-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF046ZDT https://www.encodeproject.org/files/ENCFF046ZDT/@@download/ENCFF046ZDT.bam ENCFF437NXL https://www.encodeproject.org/files/ENCFF437NXL/@@download/ENCFF437NXL.bam 39.0 M 0 32.5 M 0.835 PE 100 100 native 14.5 M 0.0 M 13.8 M 0.706 0.95 0.95 18.99 200 1.60 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/74025fea-8ad4-4a56-9dfc-ab6a405b5be7/@@download/cross_correlation_plot/ENCFF028SIJENCFF659QDJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB020WHN michael-snyder:L-2819 "ENCFF028SIJ,ENCFF659QDJ" HiSeq 2000 2016-11-23T06:45:27.354157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGx500369J8Y1zJ1XXYybK ENCSR833FWC https://www.encodeproject.org/experiments/ENCSR833FWC "transcription factor,RNA binding protein" CTCF-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF048YPV https://www.encodeproject.org/files/ENCFF048YPV/@@download/ENCFF048YPV.bam ENCFF109GFQ https://www.encodeproject.org/files/ENCFF109GFQ/@@download/ENCFF109GFQ.bam 118.5 M 0 93.9 M 0.792 PE 100 100 native 41.4 M 0.0 M 21.5 M 0.363 0.52 0.52 2.06 230 1.55 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e3f850d-1fcd-41f3-9d1c-c9ae39985699/@@download/cross_correlation_plot/ENCFF262KPJENCFF229DMT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB250JPO michael-snyder:L-2816 "ENCFF262KPJ,ENCFF229DMT" HiSeq 4000 2016-09-01T21:36:51.005810+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VkQ803693J600yky6f5yp ENCSR107EUS https://www.encodeproject.org/experiments/ENCSR107EUS transcription factor POLR2A-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF345GIA https://www.encodeproject.org/files/ENCFF345GIA/@@download/ENCFF345GIA.bam ENCFF265PNE https://www.encodeproject.org/files/ENCFF265PNE/@@download/ENCFF265PNE.bam 43.4 M 0 37.7 M 0.869 PE 100 100 native 16.7 M 0.0 M 16.0 M 0.737 0.96 0.96 25.46 200 1.11 3.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/be1f6044-efe8-4b25-8c13-7521c2980def/@@download/cross_correlation_plot/ENCFF466DDMENCFF768VKW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB645CKS michael-snyder:L-2820 "ENCFF768VKW,ENCFF466DDM" HiSeq 2000 2016-11-23T06:51:42.924569+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGpxj03699bpX3v0Q20yZq ENCSR132XRW https://www.encodeproject.org/experiments/ENCSR132XRW transcription factor POLR2A-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF916PDB https://www.encodeproject.org/files/ENCFF916PDB/@@download/ENCFF916PDB.bam ENCFF738UKW https://www.encodeproject.org/files/ENCFF738UKW/@@download/ENCFF738UKW.bam 113.8 M 0 72.6 M 0.638 PE 100 100 native 31.8 M 0.0 M 18.6 M 0.327 0.59 0.58 2.37 235 1.27 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/17002872-27ef-4875-bc5e-54d63cb4a492/@@download/cross_correlation_plot/ENCFF945PBZENCFF252EVO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB190IHO michael-snyder:L-2817 "ENCFF252EVO,ENCFF945PBZ" HiSeq 4000 2016-09-01T21:36:35.166774+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vkqj03693J600yky6f5zk ENCSR667UWT https://www.encodeproject.org/experiments/ENCSR667UWT transcription factor POLR2A-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF340HRS https://www.encodeproject.org/files/ENCFF340HRS/@@download/ENCFF340HRS.bam ENCFF797CJA https://www.encodeproject.org/files/ENCFF797CJA/@@download/ENCFF797CJA.bam 146.8 M 0 115.5 M 0.787 PE 100 100 native 50.7 M 0.0 M 36.7 M 0.500 0.72 0.72 3.53 230 1.55 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1928938-bf1b-47ed-b88a-e65edb1bec3f/@@download/cross_correlation_plot/ENCFF445QWTENCFF384DGC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB806CNE michael-snyder:L-2976 "ENCFF384DGC,ENCFF445QWT" HiSeq 4000 2016-09-01T21:40:27.326093+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3Vjvj0369B8gKYkby8yVxX ENCSR974HQI https://www.encodeproject.org/experiments/ENCSR974HQI transcription factor POLR2A-human transverse colon tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF389LQB https://www.encodeproject.org/files/ENCFF389LQB/@@download/ENCFF389LQB.bam ENCFF948BOJ https://www.encodeproject.org/files/ENCFF948BOJ/@@download/ENCFF948BOJ.bam 39.7 M 0 37.1 M 0.936 PE 100 100 native 16.3 M 0.0 M 16.0 M 0.809 0.99 0.99 71.74 205 1.08 6.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/50f1f384-179d-453c-af20-7f246512ac32/@@download/cross_correlation_plot/ENCFF272HABENCFF763GOA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB140PUZ michael-snyder:L-2823 "ENCFF272HAB,ENCFF763GOA" HiSeq 2000 2016-11-23T06:51:00.368366+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pGqV80369GxQv505yqzkvK ENCSR061CNP https://www.encodeproject.org/experiments/ENCSR061CNP control Control-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF696CNP https://www.encodeproject.org/files/ENCFF696CNP/@@download/ENCFF696CNP.bam ENCFF599GFA https://www.encodeproject.org/files/ENCFF599GFA/@@download/ENCFF599GFA.bam 81.6 M 0 76.7 M 0.941 PE 100 100 native 33.3 M 0.0 M 31.7 M 0.778 0.95 0.95 20.39 170 1.07 5.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/540ad780-e838-4669-9a18-8ded98243a43/@@download/cross_correlation_plot/ENCFF639MIHENCFF633TME.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB317XDG michael-snyder:L-3147 "ENCFF639MIH,ENCFF633TME" HiSeq 4000 2016-12-07T18:38:02.523462+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XJG00369GF6Zz7q8q7jKJ ENCSR062MVC https://www.encodeproject.org/experiments/ENCSR062MVC control Control-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF562CIX https://www.encodeproject.org/files/ENCFF562CIX/@@download/ENCFF562CIX.bam ENCFF225JCI https://www.encodeproject.org/files/ENCFF225JCI/@@download/ENCFF225JCI.bam 71.7 M 0 68.3 M 0.952 PE 100 100 native 29.3 M 0.0 M 28.2 M 0.785 0.96 0.96 24.88 180 1.07 6.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/8092ab09-c639-4eb3-90a2-a02b779ceab0/@@download/cross_correlation_plot/ENCFF610QSYENCFF183XHS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB121WFX michael-snyder:L-3148 "ENCFF610QSY,ENCFF183XHS" HiSeq 4000 2016-12-07T18:37:51.371716+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XJx8036973g8YF063VXpj ENCSR388VGR https://www.encodeproject.org/experiments/ENCSR388VGR control Control-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF964IJV https://www.encodeproject.org/files/ENCFF964IJV/@@download/ENCFF964IJV.bam ENCFF975LMN https://www.encodeproject.org/files/ENCFF975LMN/@@download/ENCFF975LMN.bam 91.6 M 0 86.9 M 0.949 PE 100 100 native 37.0 M 0.0 M 32.1 M 0.700 0.87 0.87 7.37 175 1.06 3.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef67a527-d097-4415-8421-906a3798d4c4/@@download/cross_correlation_plot/ENCFF267FZIENCFF599PHN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB881XEW michael-snyder:L-3329 "ENCFF267FZI,ENCFF599PHN" HiSeq 4000 2017-03-23T18:10:05.435164+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F39QFQ80369PbxQzF8X3VJYj ENCSR492GDK https://www.encodeproject.org/experiments/ENCSR492GDK control Control-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF519AHQ https://www.encodeproject.org/files/ENCFF519AHQ/@@download/ENCFF519AHQ.bam ENCFF537LWG https://www.encodeproject.org/files/ENCFF537LWG/@@download/ENCFF537LWG.bam 72.1 M 0 69.0 M 0.957 PE 100 100 native 29.9 M 0.0 M 28.7 M 0.798 0.96 0.96 25.87 190 1.07 7.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d5e7808-c7c2-41d6-9f3d-869b05424e23/@@download/cross_correlation_plot/ENCFF047UFKENCFF792LBY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB428CJV michael-snyder:L-3146 "ENCFF792LBY,ENCFF047UFK" HiSeq 4000 2016-12-07T18:38:58.713993+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XJg003694pQGq7q2y5vYY ENCSR961NYO https://www.encodeproject.org/experiments/ENCSR961NYO control Control-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF219XWI https://www.encodeproject.org/files/ENCFF219XWI/@@download/ENCFF219XWI.bam ENCFF290OBJ https://www.encodeproject.org/files/ENCFF290OBJ/@@download/ENCFF290OBJ.bam 72.7 M 0 69.7 M 0.960 PE 100 100 native 30.0 M 0.0 M 28.8 M 0.791 0.96 0.96 23.94 160 1.07 8.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/18d9bef3-ba7c-48aa-8ace-b63e4fda1e75/@@download/cross_correlation_plot/ENCFF540KKHENCFF357AAO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB967YHB michael-snyder:L-3149 "ENCFF357AAO,ENCFF540KKH" HiSeq 4000 2016-12-07T18:32:26.138669+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XPQ00369GfY0Z34VPgyb3 ENCSR027FSZ https://www.encodeproject.org/experiments/ENCSR027FSZ "transcription factor,RNA binding protein" CTCF-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF894PHG https://www.encodeproject.org/files/ENCFF894PHG/@@download/ENCFF894PHG.bam ENCFF475SVF https://www.encodeproject.org/files/ENCFF475SVF/@@download/ENCFF475SVF.bam 86.5 M 0 81.9 M 0.946 PE 100 100 native 35.8 M 0.0 M 33.8 M 0.781 0.94 0.94 17.28 185 2.13 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6ec7a64-0873-4b96-baf6-33c74444ae30/@@download/cross_correlation_plot/ENCFF527SCAENCFF239LFN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB718UZC michael-snyder:L-3152 "ENCFF239LFN,ENCFF527SCA" HiSeq 4000 2016-12-07T18:37:55.562345+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XK400369FFXJG19Qv15XF ENCSR964BKO https://www.encodeproject.org/experiments/ENCSR964BKO "transcription factor,RNA binding protein" CTCF-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF957DAV https://www.encodeproject.org/files/ENCFF957DAV/@@download/ENCFF957DAV.bam ENCFF177RBP https://www.encodeproject.org/files/ENCFF177RBP/@@download/ENCFF177RBP.bam 99.6 M 0 94.7 M 0.951 PE 100 100 native 41.1 M 0.0 M 38.1 M 0.766 0.93 0.93 13.56 175 1.29 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/f079c020-04d9-44e0-a70c-1d3d6030dc2d/@@download/cross_correlation_plot/ENCFF901YTMENCFF427OPF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB602MUW michael-snyder:L-3153 "ENCFF901YTM,ENCFF427OPF" HiSeq 4000 2016-12-07T18:40:01.428153+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XGj00369GF6Zz7q8q7jK3 ENCSR970UZD https://www.encodeproject.org/experiments/ENCSR970UZD "transcription factor,RNA binding protein" CTCF-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF170EHY https://www.encodeproject.org/files/ENCFF170EHY/@@download/ENCFF170EHY.bam ENCFF168OHY https://www.encodeproject.org/files/ENCFF168OHY/@@download/ENCFF168OHY.bam 76.6 M 0 72.9 M 0.951 PE 100 100 native 31.4 M 0.0 M 30.1 M 0.787 0.96 0.96 24.05 190 1.22 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/9cd42f0a-f35e-470e-8962-053292aa144e/@@download/cross_correlation_plot/ENCFF550BKXENCFF635PVD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB225AOQ michael-snyder:L-3150 "ENCFF635PVD,ENCFF550BKX" HiSeq 4000 2016-12-07T18:38:46.294992+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XJVQ036953GQ27qgf59Y4 ENCSR972LYL https://www.encodeproject.org/experiments/ENCSR972LYL "transcription factor,RNA binding protein" CTCF-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF703ZWI https://www.encodeproject.org/files/ENCFF703ZWI/@@download/ENCFF703ZWI.bam ENCFF960PUX https://www.encodeproject.org/files/ENCFF960PUX/@@download/ENCFF960PUX.bam 74.0 M 0 69.3 M 0.937 PE 100 100 native 30.3 M 0.0 M 28.9 M 0.782 0.95 0.95 21.50 185 1.67 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/83ea2b3e-7042-4285-9cae-4b0a2c7bdf44/@@download/cross_correlation_plot/ENCFF803CMGENCFF311EXW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB618CIA michael-snyder:L-3151 "ENCFF803CMG,ENCFF311EXW" HiSeq 4000 2016-12-07T18:37:53.650914+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XJ6803698KZ5p4BY9z673 ENCSR033NHF https://www.encodeproject.org/experiments/ENCSR033NHF transcription factor POLR2A-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF840IWN https://www.encodeproject.org/files/ENCFF840IWN/@@download/ENCFF840IWN.bam ENCFF457RIG https://www.encodeproject.org/files/ENCFF457RIG/@@download/ENCFF457RIG.bam 98.4 M 0 91.0 M 0.924 PE 100 100 native 39.9 M 0.0 M 34.9 M 0.708 0.87 0.87 7.86 200 1.95 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e03bf01-ef0b-41c1-b91c-efdf970ca15a/@@download/cross_correlation_plot/ENCFF241CFUENCFF962IZX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB110HYG michael-snyder:L-3333 "ENCFF241CFU,ENCFF962IZX" HiSeq 4000 2017-03-21T07:24:53.309196+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F38155j0369GZQ86PZzyYjbK ENCSR068WNI https://www.encodeproject.org/experiments/ENCSR068WNI transcription factor POLR2A-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF502VCR https://www.encodeproject.org/files/ENCFF502VCR/@@download/ENCFF502VCR.bam ENCFF687GIG https://www.encodeproject.org/files/ENCFF687GIG/@@download/ENCFF687GIG.bam 90.4 M 0 87.4 M 0.967 PE 100 100 native 37.9 M 0.0 M 34.4 M 0.760 0.91 0.91 10.73 160 1.05 4.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c08ae93-53b4-4c4f-ac56-0d6c5f370ff3/@@download/cross_correlation_plot/ENCFF012WDSENCFF347JRV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB135PRK michael-snyder:L-3203 "ENCFF347JRV,ENCFF012WDS" HiSeq 4000 2016-12-10T03:49:30.274115+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qx3Q03692yykb1zBpz2Kv ENCSR674IEI https://www.encodeproject.org/experiments/ENCSR674IEI transcription factor POLR2A-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF708PYT https://www.encodeproject.org/files/ENCFF708PYT/@@download/ENCFF708PYT.bam ENCFF838IBQ https://www.encodeproject.org/files/ENCFF838IBQ/@@download/ENCFF838IBQ.bam 81.7 M 0 76.1 M 0.931 PE 100 100 native 32.6 M 0.0 M 28.9 M 0.707 0.88 0.90 10.44 195 1.15 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/8cda7e92-91a7-414d-9f98-f33ce615687c/@@download/cross_correlation_plot/ENCFF063DDHENCFF955ITN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB012ULW michael-snyder:L-3205 "ENCFF955ITN,ENCFF063DDH" HiSeq 4000 2016-12-10T02:52:29.237533+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qy9j0369B6ZyvJ8yKQKQz ENCSR888OWU https://www.encodeproject.org/experiments/ENCSR888OWU transcription factor POLR2A-human upper lobe of left lung tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF123BAK https://www.encodeproject.org/files/ENCFF123BAK/@@download/ENCFF123BAK.bam ENCFF861XEB https://www.encodeproject.org/files/ENCFF861XEB/@@download/ENCFF861XEB.bam 69.9 M 0 66.3 M 0.948 PE 100 100 native 27.9 M 0.0 M 25.2 M 0.721 0.90 0.91 11.16 215 1.10 2.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a0d049d-bef4-41ed-bcb1-7d845e5ebde1/@@download/cross_correlation_plot/ENCFF715ESGENCFF740EMX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB175MYB michael-snyder:L-3204 "ENCFF715ESG,ENCFF740EMX" HiSeq 4000 2016-12-10T02:34:31.798397+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F15Qq1Q03697z15X64Vg0QgK ENCSR224COZ https://www.encodeproject.org/experiments/ENCSR224COZ control Control-human uterus tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF990MMF https://www.encodeproject.org/files/ENCFF990MMF/@@download/ENCFF990MMF.bam ENCFF250FEG https://www.encodeproject.org/files/ENCFF250FEG/@@download/ENCFF250FEG.bam 116.3 M 0 100.3 M 0.863 PE 100 100 native 41.6 M 0.0 M 35.1 M 0.604 0.84 0.84 6.44 325 1.00 0.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/0fa9929e-d99d-4cc7-87d6-e0099a6b4cb2/@@download/cross_correlation_plot/ENCFF843WCRENCFF079TRL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB497UBD michael-snyder:L-3107 "ENCFF843WCR,ENCFF079TRL" HiSeq 4000 2016-10-27T22:28:10.520070+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bbjj03694q32PPxBJ6Zxx ENCSR948PSS https://www.encodeproject.org/experiments/ENCSR948PSS control Control-human uterus tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF242TYP https://www.encodeproject.org/files/ENCFF242TYP/@@download/ENCFF242TYP.bam ENCFF933QGF https://www.encodeproject.org/files/ENCFF933QGF/@@download/ENCFF933QGF.bam 116.1 M 0 110.1 M 0.949 PE 100 100 native 48.7 M 0.0 M 40.2 M 0.693 0.83 0.83 5.76 130 1.06 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/df103c8b-618d-480c-ab56-cb3888ad9fc9/@@download/cross_correlation_plot/ENCFF747GMMENCFF868HAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB009XPV michael-snyder:L-3106 "ENCFF868HAY,ENCFF747GMM" HiSeq 4000 2016-10-27T22:14:24.873898+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bzxj03695140QP5B2vy0B ENCSR392SFJ https://www.encodeproject.org/experiments/ENCSR392SFJ "transcription factor,RNA binding protein" CTCF-human uterus tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF590TPY https://www.encodeproject.org/files/ENCFF590TPY/@@download/ENCFF590TPY.bam ENCFF776EYK https://www.encodeproject.org/files/ENCFF776EYK/@@download/ENCFF776EYK.bam 87.6 M 0 80.2 M 0.916 PE 100 100 native 34.7 M 0.0 M 28.8 M 0.658 0.83 0.83 5.88 145 1.49 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/7fde46b3-7790-4930-82a8-9bc99be61c26/@@download/cross_correlation_plot/ENCFF706PQVENCFF547FMQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB451GVX michael-snyder:L-3103 "ENCFF706PQV,ENCFF547FMQ" HiSeq 4000 2016-10-27T22:25:21.612487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bj9803695YX1xgJBKFkYf ENCSR798NVH https://www.encodeproject.org/experiments/ENCSR798NVH "transcription factor,RNA binding protein" CTCF-human uterus tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF204QUC https://www.encodeproject.org/files/ENCFF204QUC/@@download/ENCFF204QUC.bam ENCFF880WPI https://www.encodeproject.org/files/ENCFF880WPI/@@download/ENCFF880WPI.bam 115.7 M 0 107.8 M 0.932 PE 100 100 native 46.4 M 0.0 M 36.8 M 0.637 0.79 0.79 4.83 140 1.26 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/23a383c6-3cb5-4923-a81e-4bee24c51988/@@download/cross_correlation_plot/ENCFF262JDYENCFF829YZO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB856BVS michael-snyder:L-3104 "ENCFF262JDY,ENCFF829YZO" HiSeq 4000 2016-10-27T22:19:43.902704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08bxY003695YX1xgJBKFkx1 ENCSR142SQX https://www.encodeproject.org/experiments/ENCSR142SQX transcription factor POLR2A-human uterus tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF807HHA https://www.encodeproject.org/files/ENCFF807HHA/@@download/ENCFF807HHA.bam ENCFF618WIM https://www.encodeproject.org/files/ENCFF618WIM/@@download/ENCFF618WIM.bam 93.2 M 0 77.9 M 0.836 PE 100 100 native 34.2 M 0.0 M 30.9 M 0.662 0.90 0.90 10.66 165 1.34 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a38e9b4-3fac-45b6-a2a8-a10e28adfe9a/@@download/cross_correlation_plot/ENCFF973HMKENCFF534XBR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB733JIJ michael-snyder:L-3158 "ENCFF534XBR,ENCFF973HMK" HiSeq 4000 2016-12-07T18:39:00.300222+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F13XFkQ03692GB4VPZpvxXVZ ENCSR999QVR https://www.encodeproject.org/experiments/ENCSR999QVR transcription factor POLR2A-human uterus tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF536IZP https://www.encodeproject.org/files/ENCFF536IZP/@@download/ENCFF536IZP.bam ENCFF239ZYE https://www.encodeproject.org/files/ENCFF239ZYE/@@download/ENCFF239ZYE.bam 101.7 M 0 94.7 M 0.931 PE 100 100 native 41.8 M 0.0 M 31.4 M 0.618 0.75 0.75 3.94 150 1.09 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/3dc10e87-13d2-4fa2-9ed4-2336ab70d552/@@download/cross_correlation_plot/ENCFF500XDCENCFF042CMS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB034VNY michael-snyder:L-3105 "ENCFF500XDC,ENCFF042CMS" HiSeq 4000 2016-10-27T22:10:19.928220+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08f11Q0369GJ6xQfbB7F657 ENCSR558QYH https://www.encodeproject.org/experiments/ENCSR558QYH control Control-human vagina tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF052DDM https://www.encodeproject.org/files/ENCFF052DDM/@@download/ENCFF052DDM.bam ENCFF859WFS https://www.encodeproject.org/files/ENCFF859WFS/@@download/ENCFF859WFS.bam 111.3 M 0 109.1 M 0.980 PE 100 100 native 48.5 M 0.0 M 36.9 M 0.664 0.76 0.76 4.08 165 1.06 7.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/c03343b1-fc5b-4c59-8299-d0b6c2e925d2/@@download/cross_correlation_plot/ENCFF346VXQENCFF903FDT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB121WQE michael-snyder:L-3245 "ENCFF346VXQ,ENCFF903FDT" HiSeq 4000 2017-01-27T06:25:41.068171+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Zv003697kzvVJ0zQF38b ENCSR997NXO https://www.encodeproject.org/experiments/ENCSR997NXO control Control-human vagina tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF051LKD https://www.encodeproject.org/files/ENCFF051LKD/@@download/ENCFF051LKD.bam ENCFF175WBX https://www.encodeproject.org/files/ENCFF175WBX/@@download/ENCFF175WBX.bam 99.4 M 0 96.9 M 0.975 PE 100 100 native 42.7 M 0.0 M 31.6 M 0.636 0.74 0.76 4.14 175 1.07 8.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/a987bf00-e447-4c2c-a4c3-9ec15395c409/@@download/cross_correlation_plot/ENCFF635NCCENCFF423TLJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB095INY michael-snyder:L-3248 "ENCFF423TLJ,ENCFF635NCC" HiSeq 4000 2017-01-27T06:25:21.939030+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253ZVQ0369P8ygG5ZVzbbXq ENCSR606TNN https://www.encodeproject.org/experiments/ENCSR606TNN "transcription factor,RNA binding protein" CTCF-human vagina tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF132JEX https://www.encodeproject.org/files/ENCFF132JEX/@@download/ENCFF132JEX.bam ENCFF100EDD https://www.encodeproject.org/files/ENCFF100EDD/@@download/ENCFF100EDD.bam 78.4 M 0 75.7 M 0.965 PE 100 100 native 33.7 M 0.0 M 23.2 M 0.593 0.69 0.68 3.01 190 1.21 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/591f3662-8fb3-4514-a020-b9ddc4aa8770/@@download/cross_correlation_plot/ENCFF215BBJENCFF023HVW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB373LND michael-snyder:L-3243 "ENCFF215BBJ,ENCFF023HVW" HiSeq 4000 2017-01-27T06:24:09.732149+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253b18036916F1fJ0XbFff5 ENCSR655ECZ https://www.encodeproject.org/experiments/ENCSR655ECZ "transcription factor,RNA binding protein" CTCF-human vagina tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF758JXA https://www.encodeproject.org/files/ENCFF758JXA/@@download/ENCFF758JXA.bam ENCFF779TNF https://www.encodeproject.org/files/ENCFF779TNF/@@download/ENCFF779TNF.bam 89.4 M 0 87.0 M 0.973 PE 100 100 native 38.5 M 0.0 M 21.0 M 0.471 0.55 0.52 1.94 195 1.12 5.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3037eca-7dae-4ed2-8ecb-b8c15d5c915e/@@download/cross_correlation_plot/ENCFF541ASVENCFF760NIU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB068RSJ michael-snyder:L-3246 "ENCFF760NIU,ENCFF541ASV" HiSeq 4000 2017-01-27T06:24:04.036899+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F253Zg00369K2b5QJ1587QZ0 ENCSR401ORC https://www.encodeproject.org/experiments/ENCSR401ORC transcription factor POLR2A-human vagina tissue 1 michael-snyder ENCODE3 GRCh38 ENCFF147GTA https://www.encodeproject.org/files/ENCFF147GTA/@@download/ENCFF147GTA.bam ENCFF825ONH https://www.encodeproject.org/files/ENCFF825ONH/@@download/ENCFF825ONH.bam 103.7 M 0 99.7 M 0.962 PE 100 100 native 44.4 M 0.0 M 28.0 M 0.541 0.63 0.62 2.53 160 1.12 2.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c3fdba2-3060-4ee4-8a4d-b121cd51534c/@@download/cross_correlation_plot/ENCFF389ZTPENCFF788KCN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB227GAT michael-snyder:L-3244 "ENCFF389ZTP,ENCFF788KCN" HiSeq 4000 2017-01-28T05:04:02.984531+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F25j9ZQ0369654jBFY5X6J08 ENCSR696HTM https://www.encodeproject.org/experiments/ENCSR696HTM transcription factor POLR2A-human vagina tissue 2 michael-snyder ENCODE3 GRCh38 ENCFF541QJE https://www.encodeproject.org/files/ENCFF541QJE/@@download/ENCFF541QJE.bam ENCFF907PEU https://www.encodeproject.org/files/ENCFF907PEU/@@download/ENCFF907PEU.bam 77.6 M 0 68.8 M 0.887 PE 100 100 native 29.0 M 0.0 M 20.7 M 0.533 0.71 0.70 3.24 175 1.08 7.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/5dce0088-8aca-4e36-a2c8-4e3a85221e80/@@download/cross_correlation_plot/ENCFF166CFLENCFF115IMK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB294PQE michael-snyder:L-3339 "ENCFF166CFL,ENCFF115IMK" HiSeq 4000 2017-03-17T16:49:02.523880+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F35X0Y803692Q4k4J13g2XGp ENCSR716BTZ https://www.encodeproject.org/experiments/ENCSR716BTZ control Control-human VCaP immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF367CAA https://www.encodeproject.org/files/ENCFF367CAA/@@download/ENCFF367CAA.bam ENCFF740BZH https://www.encodeproject.org/files/ENCFF740BZH/@@download/ENCFF740BZH.bam 68.7 M 0 67.4 M 0.982 PE 100 100 native 29.2 M 0.0 M 28.2 M 0.822 0.97 0.97 29.84 340 1.03 18.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/41325918-905e-447f-b11b-a3a3a669a1e7/@@download/cross_correlation_plot/ENCFF273KUSENCFF466WDC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB244AHP michael-snyder:L-2782 "ENCFF273KUS,ENCFF466WDC" HiSeq 2000 2017-03-01T18:01:49.324127+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpJX003698G3g16xyFf7kg ENCSR716BTZ https://www.encodeproject.org/experiments/ENCSR716BTZ control Control-human VCaP immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF567SBX https://www.encodeproject.org/files/ENCFF567SBX/@@download/ENCFF567SBX.bam ENCFF819GVH https://www.encodeproject.org/files/ENCFF819GVH/@@download/ENCFF819GVH.bam 92.7 M 0 90.8 M 0.980 PE 100 100 native 38.4 M 0.0 M 37.8 M 0.816 0.98 0.98 66.01 360 1.02 5.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/799a9a53-ecb3-44e3-91b2-51c00885e0e7/@@download/cross_correlation_plot/ENCFF872HTMENCFF996TKV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB968FVP michael-snyder:L-3098 "ENCFF996TKV,ENCFF872HTM" HiSeq 2000 2017-07-20T04:23:27.807674+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpJbQ0369KjpJFGY10JZ48 ENCSR265ARE https://www.encodeproject.org/experiments/ENCSR265ARE "transcription factor,RNA binding protein" CTCF-human VCaP immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF495OAG https://www.encodeproject.org/files/ENCFF495OAG/@@download/ENCFF495OAG.bam ENCFF528MPG https://www.encodeproject.org/files/ENCFF528MPG/@@download/ENCFF528MPG.bam 74.5 M 0 73.0 M 0.980 PE 100 100 native 32.0 M 0.0 M 25.2 M 0.676 0.79 0.78 4.41 290 1.58 2.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/cca9a426-7487-4a3c-9970-6be1421ecff1/@@download/cross_correlation_plot/ENCFF950MHMENCFF858GIB.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB697NZR michael-snyder:L-2772 "ENCFF950MHM,ENCFF858GIB" HiSeq 2000 2017-03-23T18:11:04.498218+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpJk00369KjpJFGY10JZ4Y ENCSR265ARE https://www.encodeproject.org/experiments/ENCSR265ARE "transcription factor,RNA binding protein" CTCF-human VCaP immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF447CUQ https://www.encodeproject.org/files/ENCFF447CUQ/@@download/ENCFF447CUQ.bam ENCFF395ZXI https://www.encodeproject.org/files/ENCFF395ZXI/@@download/ENCFF395ZXI.bam 96.9 M 0 94.8 M 0.978 PE 100 100 native 40.8 M 0.0 M 38.8 M 0.800 0.95 0.95 19.76 285 1.76 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f31db0d-5bd6-4655-8d45-521e0bd0e68b/@@download/cross_correlation_plot/ENCFF199YWXENCFF857ZPD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB352TMT michael-snyder:L-3097 "ENCFF857ZPD,ENCFF199YWX" HiSeq 2000 2017-07-20T04:36:55.959822+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpJv803693zq14PkBXG961 ENCSR597ULV https://www.encodeproject.org/experiments/ENCSR597ULV "histone,histone modification,narrow histone mark" H3K27ac-human VCaP immortalized cell line 1 michael-snyder ENCODE3 GRCh38 ENCFF237YEX https://www.encodeproject.org/files/ENCFF237YEX/@@download/ENCFF237YEX.bam ENCFF489YUG https://www.encodeproject.org/files/ENCFF489YUG/@@download/ENCFF489YUG.bam 60.8 M 0 60.1 M 0.987 PE 100 100 native 27.2 M 0.0 M 25.8 M 0.849 0.95 0.95 20.07 335 1.30 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/dfd7f38e-dcad-46d7-8394-a44753ee5bc8/@@download/cross_correlation_plot/ENCFF704XKCENCFF707CNX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB904PZW michael-snyder:L-2777 "ENCFF707CNX,ENCFF704XKC" HiSeq 2000 2017-03-20T23:47:52.626385+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpJBQ0369036YB6Qz0g7j8 ENCSR597ULV https://www.encodeproject.org/experiments/ENCSR597ULV "histone,histone modification,narrow histone mark" H3K27ac-human VCaP immortalized cell line 2 michael-snyder ENCODE3 GRCh38 ENCFF458HWQ https://www.encodeproject.org/files/ENCFF458HWQ/@@download/ENCFF458HWQ.bam ENCFF538CSV https://www.encodeproject.org/files/ENCFF538CSV/@@download/ENCFF538CSV.bam 116.3 M 0 114.8 M 0.987 PE 100 100 native 50.8 M 0.0 M 49.5 M 0.851 0.97 0.97 37.44 315 1.15 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/42c8a477-f184-4edb-afd5-c6a03ea7a61c/@@download/cross_correlation_plot/ENCFF437EXKENCFF455NHN.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB856OBQ michael-snyder:L-3096 "ENCFF437EXK,ENCFF455NHN" HiSeq 2000 2017-07-20T06:21:50.186299+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5gpJJj036931QGBPb2VFyfj ENCSR000EVV https://www.encodeproject.org/experiments/ENCSR000EVV control Control-human endothelial cell of umbilical vein primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF108PMF https://www.encodeproject.org/files/ENCFF108PMF/@@download/ENCFF108PMF.bam ENCFF660XDK https://www.encodeproject.org/files/ENCFF660XDK/@@download/ENCFF660XDK.bam 57.0 M 0 56.4 M 0.989 SE 36 36 native 0.0 M 42.1 M 38.5 M 0.674 0.92 0.92 14.28 225 1.02 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/0632b2a4-b95d-43e1-adf2-bc9141f77d13/@@download/cross_correlation_plot/ENCFF000YBC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB902RIM ENCFF000YBC Illumina Genome Analyzer 2017-02-28T16:38:00.149311+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pBy7Q036962qyg6vBVzfFx ENCSR000EVU https://www.encodeproject.org/experiments/ENCSR000EVU transcription factor FOS-human endothelial cell of umbilical vein primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF097IAS https://www.encodeproject.org/files/ENCFF097IAS/@@download/ENCFF097IAS.bam ENCFF745KEO https://www.encodeproject.org/files/ENCFF745KEO/@@download/ENCFF745KEO.bam 18.1 M 0 14.1 M 0.779 SE 36 36 native 0.0 M 10.4 M 7.7 M 0.424 0.74 0.72 3.34 180 1.42 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2e81e94-5112-43dd-8fe7-fd9d5e314ddf/@@download/cross_correlation_plot/ENCFF000YAA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB693ZAK ENCFF000YAA Illumina Genome Analyzer 2016-12-11T02:44:18.219323+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1645B003699K237J9jY9kfY ENCSR000EVU https://www.encodeproject.org/experiments/ENCSR000EVU transcription factor FOS-human endothelial cell of umbilical vein primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF620HUP https://www.encodeproject.org/files/ENCFF620HUP/@@download/ENCFF620HUP.bam ENCFF031DYX https://www.encodeproject.org/files/ENCFF031DYX/@@download/ENCFF031DYX.bam 48.9 M 0 43.0 M 0.879 SE 36 36 native 0.0 M 34.6 M 26.1 M 0.533 0.76 0.74 3.60 190 1.31 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/89635783-b506-42f8-9e0c-0db315617c48/@@download/cross_correlation_plot/ENCFF000YAE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB563MYI ENCFF000YAE Illumina Genome Analyzer 2016-12-11T03:10:53.317178+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1645Kj0369BgG8x1ygv1X37 ENCSR000EVW https://www.encodeproject.org/experiments/ENCSR000EVW transcription factor GATA2-human endothelial cell of umbilical vein primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF755LCI https://www.encodeproject.org/files/ENCFF755LCI/@@download/ENCFF755LCI.bam ENCFF472PGJ https://www.encodeproject.org/files/ENCFF472PGJ/@@download/ENCFF472PGJ.bam 43.9 M 0 33.1 M 0.754 SE 36 32 32 0.0 M 24.9 M 19.0 M 0.433 0.76 0.75 3.88 175 1.26 2.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/000cd680-5730-44b4-9573-28851824a2e3/@@download/cross_correlation_plot/ENCFF000YAT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB825GPQ ENCFF000YAT Illumina Genome Analyzer 2016-12-13T03:44:09.890995+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zqq003699Z3Y8493qf2pf ENCSR000EVW https://www.encodeproject.org/experiments/ENCSR000EVW transcription factor GATA2-human endothelial cell of umbilical vein primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF865ULF https://www.encodeproject.org/files/ENCFF865ULF/@@download/ENCFF865ULF.bam ENCFF472PGJ https://www.encodeproject.org/files/ENCFF472PGJ/@@download/ENCFF472PGJ.bam 43.9 M 0 32.7 M 0.746 SE 36 36 native 0.0 M 25.5 M 19.4 M 0.442 0.76 0.76 3.91 175 1.25 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/14ed0a77-5f03-4aef-8407-1a208a883f4e/@@download/cross_correlation_plot/ENCFF000YAT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB825GPQ ENCFF000YAT Illumina Genome Analyzer 2017-03-01T18:01:13.635640+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pBzq80369G2X8Q462Xz9Kg ENCSR000EVW https://www.encodeproject.org/experiments/ENCSR000EVW transcription factor GATA2-human endothelial cell of umbilical vein primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF958UOJ https://www.encodeproject.org/files/ENCFF958UOJ/@@download/ENCFF958UOJ.bam ENCFF815HYF https://www.encodeproject.org/files/ENCFF815HYF/@@download/ENCFF815HYF.bam 26.6 M 0 18.3 M 0.690 SE 32 32 32 0.0 M 13.8 M 9.2 M 0.347 0.67 0.64 2.53 220 1.99 2.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/cce24ae4-303f-4dd0-b78e-45828705ef15/@@download/cross_correlation_plot/ENCFF000YAR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB774TID ENCFF000YAR Illumina Genome Analyzer 2016-12-13T03:13:57.042887+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zv9j036969X0jJ6p3fz38 ENCSR000EVW https://www.encodeproject.org/experiments/ENCSR000EVW transcription factor GATA2-human endothelial cell of umbilical vein primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF272PYA https://www.encodeproject.org/files/ENCFF272PYA/@@download/ENCFF272PYA.bam ENCFF815HYF https://www.encodeproject.org/files/ENCFF815HYF/@@download/ENCFF815HYF.bam 26.6 M 0 18.3 M 0.690 SE 32 32 native 0.0 M 13.8 M 9.2 M 0.347 0.67 0.64 2.53 220 1.99 2.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5965e4f-2054-40ab-94d4-58473e5a6a1f/@@download/cross_correlation_plot/ENCFF000YAR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB774TID ENCFF000YAR Illumina Genome Analyzer 2017-03-01T18:01:33.091874+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2pF02j036962qyg6vBVzfGF ENCSR000EXN https://www.encodeproject.org/experiments/ENCSR000EXN control Control-human erythroblast primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF893PKD https://www.encodeproject.org/files/ENCFF893PKD/@@download/ENCFF893PKD.bam ENCFF730XXI https://www.encodeproject.org/files/ENCFF730XXI/@@download/ENCFF730XXI.bam 68.7 M 0 62.9 M 0.916 SE 36 36 native 0.0 M 47.0 M 44.1 M 0.642 0.95 0.95 21.67 240 1.02 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/9bbb0f8c-4dce-493f-8ec0-67163a0b44ca/@@download/cross_correlation_plot/ENCFF000ZPL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB473AZQ ENCFF000ZPL Illumina Genome Analyzer 2016-10-26T17:44:17.608383+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F081zxj03695YX1xgJBKFBXp ENCSR000EXQ https://www.encodeproject.org/experiments/ENCSR000EXQ control Control-human erythroblast primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF962PBI https://www.encodeproject.org/files/ENCFF962PBI/@@download/ENCFF962PBI.bam ENCFF446XKN https://www.encodeproject.org/files/ENCFF446XKN/@@download/ENCFF446XKN.bam 25.5 M 0 25.0 M 0.980 SE 36 36 native 0.0 M 18.5 M 17.1 M 0.671 0.93 0.93 13.90 235 1.01 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c3a33c8-34eb-4105-8781-0314f6696b26/@@download/cross_correlation_plot/ENCFF000ZPA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB253FMK ENCFF000ZPA Illumina Genome Analyzer 2016-10-26T17:43:37.434596+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829P00369KPb3j15B4p8kb ENCSR000EXP https://www.encodeproject.org/experiments/ENCSR000EXP transcription factor GATA1-human erythroblast primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF525TNI https://www.encodeproject.org/files/ENCFF525TNI/@@download/ENCFF525TNI.bam ENCFF531ZMI https://www.encodeproject.org/files/ENCFF531ZMI/@@download/ENCFF531ZMI.bam 20.4 M 0 16.8 M 0.825 SE 36 36 native 0.0 M 13.1 M 8.5 M 0.415 0.64 0.61 2.30 290 1.86 2.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/b0dd8f53-fc89-42d9-af72-f562c656a73d/@@download/cross_correlation_plot/ENCFF000ZOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB230HTI ENCFF000ZOO Illumina Genome Analyzer 2016-12-11T02:40:08.703037+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1642g8036904pZZ8v3bkg6K ENCSR000EXP https://www.encodeproject.org/experiments/ENCSR000EXP transcription factor GATA1-human erythroblast primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF845AVW https://www.encodeproject.org/files/ENCFF845AVW/@@download/ENCFF845AVW.bam ENCFF790KMN https://www.encodeproject.org/files/ENCFF790KMN/@@download/ENCFF790KMN.bam 22.9 M 0 14.7 M 0.642 SE 36 36 native 0.0 M 11.4 M 5.7 M 0.251 0.51 0.45 1.51 280 1.77 2.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6e3cce5-183e-46d7-8bd4-45c1357d0b55/@@download/cross_correlation_plot/ENCFF000ZOM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB788DZB ENCFF000ZOM Illumina Genome Analyzer 2016-12-11T02:35:21.535022+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1642qj0369PvYp91zK1Px8B ENCSR000EXR https://www.encodeproject.org/experiments/ENCSR000EXR transcription factor GATA1-human erythroblast primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF261SIF https://www.encodeproject.org/files/ENCFF261SIF/@@download/ENCFF261SIF.bam ENCFF931ABL https://www.encodeproject.org/files/ENCFF931ABL/@@download/ENCFF931ABL.bam 34.5 M 0 33.7 M 0.974 SE 36 36 native 0.0 M 26.2 M 17.0 M 0.492 0.65 0.63 2.59 220 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1053d05-bda3-4fbf-a1fa-22370dbeb82e/@@download/cross_correlation_plot/ENCFF000ZOT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB280QCE ENCFF000ZOT Illumina Genome Analyzer 2016-12-10T22:13:58.486436+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1637x80369B6ZyvJ8yKQXBp ENCSR000EXR https://www.encodeproject.org/experiments/ENCSR000EXR transcription factor GATA1-human erythroblast primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF147KAY https://www.encodeproject.org/files/ENCFF147KAY/@@download/ENCFF147KAY.bam ENCFF197PQI https://www.encodeproject.org/files/ENCFF197PQI/@@download/ENCFF197PQI.bam 25.8 M 0 25.3 M 0.983 SE 36 36 native 0.0 M 18.8 M 17.8 M 0.690 0.95 0.95 18.61 180 1.02 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/25e8779f-22ff-4939-b4ad-95d5e2094b11/@@download/cross_correlation_plot/ENCFF000ZOV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB234NLI ENCFF000ZOV Illumina Genome Analyzer 2016-12-10T21:51:40.349577+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16382Q036969X0jJ6p3ffZf ENCSR000EXO https://www.encodeproject.org/experiments/ENCSR000EXO transcription factor POLR2A-human erythroblast primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF586LAX https://www.encodeproject.org/files/ENCFF586LAX/@@download/ENCFF586LAX.bam ENCFF973ILN https://www.encodeproject.org/files/ENCFF973ILN/@@download/ENCFF973ILN.bam 34.2 M 0 31.2 M 0.912 SE 36 36 native 0.0 M 24.3 M 22.5 M 0.659 0.93 0.94 18.31 300 1.39 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/0708ff4c-e3f6-4b3a-9225-120a4d0a55ca/@@download/cross_correlation_plot/ENCFF000ZPN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB623UZO ENCFF000ZPN Illumina Genome Analyzer 2016-12-11T04:47:48.934189+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165vP00369BgG8x1ygv1XXG ENCSR000EXO https://www.encodeproject.org/experiments/ENCSR000EXO transcription factor POLR2A-human erythroblast primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF323KJA https://www.encodeproject.org/files/ENCFF323KJA/@@download/ENCFF323KJA.bam ENCFF553HHJ https://www.encodeproject.org/files/ENCFF553HHJ/@@download/ENCFF553HHJ.bam 38.5 M 0 33.9 M 0.879 SE 36 36 native 0.0 M 24.1 M 19.0 M 0.494 0.87 0.88 8.35 275 1.30 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/25e632b3-4b2d-45a4-a82b-f2b73e0be500/@@download/cross_correlation_plot/ENCFF000ZPK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB146DSW ENCFF000ZPK Illumina Genome Analyzer 2016-12-11T04:47:32.094071+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165vZQ0369GF0YB1zjPf72v ENCSR000EUH https://www.encodeproject.org/experiments/ENCSR000EUH control Control-human GM08714 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF887QKP https://www.encodeproject.org/files/ENCFF887QKP/@@download/ENCFF887QKP.bam ENCFF969QSH https://www.encodeproject.org/files/ENCFF969QSH/@@download/ENCFF969QSH.bam 52.9 M 0 52.3 M 0.989 SE 36 36 native 0.0 M 33.7 M 32.9 M 0.622 0.98 0.98 48.56 185 1.05 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/c65a9016-d450-406b-8421-4c7466ab0046/@@download/cross_correlation_plot/ENCFF000VQQ-ENCFF000VQO_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB799NCB "ENCFF000VQQ,ENCFF000VQO" Illumina Genome Analyzer 2016-08-09T16:03:00.131514+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZFzj03694qGXP0Q32yQ99 ENCSR000FCL https://www.encodeproject.org/experiments/ENCSR000FCL "histone,histone modification,narrow histone mark" H3K4me3-human GM08714 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF494CGD https://www.encodeproject.org/files/ENCFF494CGD/@@download/ENCFF494CGD.bam ENCFF501GRH https://www.encodeproject.org/files/ENCFF501GRH/@@download/ENCFF501GRH.bam 37.8 M 0 37.5 M 0.992 SE 36 36 None 0.0 M 30.8 M 24.8 M 0.655 0.81 0.82 6.30 195 2.12 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/faa7385c-083e-48f6-9213-955870138c8c/@@download/cross_correlation_plot/ENCFF002AAS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABY "peggy-farnham:USC96_H3K4me3_GM08714_Rep1,peggy-farnham:USC96" ENCFF002AAS Illumina Genome Analyzer IIx 2016-08-10T01:16:42.213563+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p4bQ03699yPVZfVvxfBV8 ENCSR000FCL https://www.encodeproject.org/experiments/ENCSR000FCL "histone,histone modification,narrow histone mark" H3K4me3-human GM08714 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF252PQW https://www.encodeproject.org/files/ENCFF252PQW/@@download/ENCFF252PQW.bam ENCFF380ZAM https://www.encodeproject.org/files/ENCFF380ZAM/@@download/ENCFF380ZAM.bam 37.9 M 0 37.5 M 0.989 SE 36 36 None 0.0 M 29.1 M 28.3 M 0.747 0.98 0.98 44.29 180 1.09 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/293e0446-0027-4980-8c03-cf264e3e8247/@@download/cross_correlation_plot/ENCFF002AAR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABZ "peggy-farnham:USC378,peggy-farnham:USC378_H3K4me3_GM0871_Rep2" ENCFF002AAR Illumina Genome Analyzer IIx 2016-08-10T01:17:09.416381+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p4g8036927J18bVvf18ZQ ENCSR000EUI https://www.encodeproject.org/experiments/ENCSR000EUI transcription factor ZNF274-human GM08714 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF856IKR https://www.encodeproject.org/files/ENCFF856IKR/@@download/ENCFF856IKR.bam ENCFF999BAB https://www.encodeproject.org/files/ENCFF999BAB/@@download/ENCFF999BAB.bam 23.6 M 0 22.7 M 0.964 SE 36 36 native 0.0 M 15.0 M 13.1 M 0.555 0.87 0.87 7.60 225 1.04 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6de24f1-6784-44f8-9085-c975e20b7627/@@download/cross_correlation_plot/ENCFF000VQW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB827KVB ENCFF000VQW Illumina Genome Analyzer 2016-12-11T01:56:08.495758+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163g1j03695yqvv8q311QJJ ENCSR000EUI https://www.encodeproject.org/experiments/ENCSR000EUI transcription factor ZNF274-human GM08714 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF596VUL https://www.encodeproject.org/files/ENCFF596VUL/@@download/ENCFF596VUL.bam ENCFF599NSC https://www.encodeproject.org/files/ENCFF599NSC/@@download/ENCFF599NSC.bam 29.6 M 0 28.9 M 0.976 SE 36 36 native 0.0 M 20.2 M 18.7 M 0.631 0.93 0.93 13.82 200 1.06 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/427ba3d6-8941-4a5e-9356-902269acd0fb/@@download/cross_correlation_plot/ENCFF000VQY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB514UFU ENCFF000VQY Illumina Genome Analyzer 2016-12-11T02:14:30.786631+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163g6Q0369KbxV61z4GFv8y ENCSR000EUJ https://www.encodeproject.org/experiments/ENCSR000EUJ transcription factor IKZF1-human GM12878 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF045YYY https://www.encodeproject.org/files/ENCFF045YYY/@@download/ENCFF045YYY.bam ENCFF677FLS https://www.encodeproject.org/files/ENCFF677FLS/@@download/ENCFF677FLS.bam 20.6 M 0 20.5 M 0.993 SE 36 28 28 0.0 M 14.6 M 14.3 M 0.696 0.98 0.98 51.71 180 1.05 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/5859e82e-da3e-43f1-924b-e5d3177445a2/@@download/cross_correlation_plot/ENCFF000VVV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB132JED ENCFF000VVV Illumina Genome Analyzer 2017-01-05T21:15:00.065403+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g81vQ0369PjBfKG4QzQx50 ENCSR000EUJ https://www.encodeproject.org/experiments/ENCSR000EUJ transcription factor IKZF1-human GM12878 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF736MXP https://www.encodeproject.org/files/ENCFF736MXP/@@download/ENCFF736MXP.bam ENCFF392JYM https://www.encodeproject.org/files/ENCFF392JYM/@@download/ENCFF392JYM.bam 33.5 M 0 33.0 M 0.986 SE 36 28 28 0.0 M 23.9 M 22.8 M 0.679 0.95 0.95 20.82 200 1.05 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c96f79f8-fa6d-4e4a-9d62-ce35633fe623/@@download/cross_correlation_plot/ENCFF000VVX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB639VFZ ENCFF000VVX Illumina Genome Analyzer 2017-01-05T21:12:55.077269+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g821Q03697FPkPG58gbpgy ENCSR000EUL https://www.encodeproject.org/experiments/ENCSR000EUL transcription factor NR2C2-human GM12878 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF199XSZ https://www.encodeproject.org/files/ENCFF199XSZ/@@download/ENCFF199XSZ.bam ENCFF971AIC https://www.encodeproject.org/files/ENCFF971AIC/@@download/ENCFF971AIC.bam 25.5 M 0 18.9 M 0.741 SE 32 28 28 0.0 M 12.5 M 12.3 M 0.483 0.99 0.99 70.65 140 1.06 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/089f5d4e-fe98-473b-9d97-cb53a87bae25/@@download/cross_correlation_plot/ENCFF000WFR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB912PRA ENCFF000WFR Illumina Genome Analyzer 2017-01-05T21:18:41.582124+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7xf00369P4Vg0G4JKxZZb ENCSR000EUL https://www.encodeproject.org/experiments/ENCSR000EUL transcription factor NR2C2-human GM12878 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF485BYB https://www.encodeproject.org/files/ENCFF485BYB/@@download/ENCFF485BYB.bam ENCFF987VYJ https://www.encodeproject.org/files/ENCFF987VYJ/@@download/ENCFF987VYJ.bam 28.2 M 0 23.2 M 0.821 SE 32 28 28 0.0 M 14.4 M 14.3 M 0.505 0.99 0.99 117.99 115 1.08 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e3c8a33-eb36-4b53-b08a-752ce2281a4a/@@download/cross_correlation_plot/ENCFF000WFZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB009IUW ENCFF000WFZ Illumina Genome Analyzer 2017-01-05T21:18:59.528656+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7xq803697FPkPG58gbpfP ENCSR000EUM https://www.encodeproject.org/experiments/ENCSR000EUM transcription factor YY1-human GM12878 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF980QHF https://www.encodeproject.org/files/ENCFF980QHF/@@download/ENCFF980QHF.bam ENCFF336WFG https://www.encodeproject.org/files/ENCFF336WFG/@@download/ENCFF336WFG.bam 29.2 M 0 11.7 M 0.402 SE 32 28 28 0.0 M 7.1 M 7.1 M 0.243 0.99 0.99 150.10 175 1.08 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/9888f4ad-a4b3-480f-a22e-eb278e2b940e/@@download/cross_correlation_plot/ENCFF000WGS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB284OIO ENCFF000WGS Illumina Genome Analyzer 2017-01-05T21:18:20.529994+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7yf80369Kbx0VG4x7404f ENCSR000EUK https://www.encodeproject.org/experiments/ENCSR000EUK transcription factor ZNF274-human GM12878 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF785BKE https://www.encodeproject.org/files/ENCFF785BKE/@@download/ENCFF785BKE.bam ENCFF337NGP https://www.encodeproject.org/files/ENCFF337NGP/@@download/ENCFF337NGP.bam 15.4 M 0 9.9 M 0.643 SE 32 28 28 0.0 M 6.9 M 6.9 M 0.447 0.99 1.00 305.45 105 1.02 0.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/4551aa92-6e18-44f9-acd5-35852f8ed983/@@download/cross_correlation_plot/ENCFF000WHG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB661XAQ ENCFF000WHG Illumina Genome Analyzer 2017-01-05T21:18:28.507609+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7zB803697FPkPG58gbpg7 ENCSR000EUK https://www.encodeproject.org/experiments/ENCSR000EUK transcription factor ZNF274-human GM12878 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF756SZR https://www.encodeproject.org/files/ENCFF756SZR/@@download/ENCFF756SZR.bam ENCFF997XIV https://www.encodeproject.org/files/ENCFF997XIV/@@download/ENCFF997XIV.bam 0.2 M 0 0.1 M 0.565 SE 32 28 28 0.0 M 0.1 M 0.1 M 0.399 1.00 1.00 3058.58 -45 1.17 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/066fc463-dc8d-458e-bcd9-64ecc2149413/@@download/cross_correlation_plot/ENCFF000WGV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB873PLD ENCFF000WGV Illumina Genome Analyzer 2017-01-05T21:17:55.526218+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1g7zP80369J2YG2G5JGYVkJ ENCSR000EUR https://www.encodeproject.org/experiments/ENCSR000EUR control Control-human H1-hESC stem cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF973VSE https://www.encodeproject.org/files/ENCFF973VSE/@@download/ENCFF973VSE.bam ENCFF656LBT https://www.encodeproject.org/files/ENCFF656LBT/@@download/ENCFF656LBT.bam 79.4 M 0 50.3 M 0.633 SE 76 32 32 0.0 M 29.1 M 27.9 M 0.352 0.96 0.96 24.82 155 1.03 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e73d1fd-d4e5-4e2c-89c1-1bc90c7e52df/@@download/cross_correlation_plot/ENCFF000WUW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB323STL ENCFF000WUW Illumina Genome Analyzer 2016-12-10T20:07:32.298017+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F161kZ803692pJ09J76g5fYJ ENCSR000EUO https://www.encodeproject.org/experiments/ENCSR000EUO transcription factor CTBP2-human H1-hESC stem cell peggy-farnham ENCODE2 pending SE "32,36" Illumina Genome Analyzer unreviewed ENCSR000EUP https://www.encodeproject.org/experiments/ENCSR000EUP transcription factor MAX-human H1-hESC stem cell peggy-farnham ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000EUQ https://www.encodeproject.org/experiments/ENCSR000EUQ "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human H1-hESC stem cell peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EUN https://www.encodeproject.org/experiments/ENCSR000EUN transcription factor ZNF274-human H1-hESC stem cell peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EUX https://www.encodeproject.org/experiments/ENCSR000EUX control Control-human HCT116 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF285EDT https://www.encodeproject.org/files/ENCFF285EDT/@@download/ENCFF285EDT.bam ENCFF885RHY https://www.encodeproject.org/files/ENCFF885RHY/@@download/ENCFF885RHY.bam 45.3 M 0 37.8 M 0.836 SE 36 32 32 0.0 M 28.3 M 27.4 M 0.605 0.99 0.99 84.60 135 1.01 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/4435ad9a-2f29-4e04-aec4-d0d236a6f23a/@@download/cross_correlation_plot/ENCFF000VCY-ENCFF000VCW_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB879CKK "ENCFF000VCW,ENCFF000VCY" Illumina Genome Analyzer 2017-07-28T00:24:05.179172+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5x60v00369Pqx174vX8k6Qg ENCSR000EUX https://www.encodeproject.org/experiments/ENCSR000EUX control Control-human HCT116 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF878LDQ https://www.encodeproject.org/files/ENCFF878LDQ/@@download/ENCFF878LDQ.bam ENCFF885RHY https://www.encodeproject.org/files/ENCFF885RHY/@@download/ENCFF885RHY.bam 45.3 M 0 37.8 M 0.834 SE 36 36 None 0.0 M 29.1 M 28.2 M 0.622 0.99 0.99 85.04 145 1.01 0.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d232821-3863-442b-b882-b1684278aac6/@@download/cross_correlation_plot/ENCFF000VCY-ENCFF000VCW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB879CKK "ENCFF000VCW,ENCFF000VCY" Illumina Genome Analyzer 2016-07-13T02:53:43.324595+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4jQ03693JvxGJJZb0Kzz ENCSR000EUT https://www.encodeproject.org/experiments/ENCSR000EUT "histone,histone modification,narrow histone mark" H3K27ac-human HCT116 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF564WXV https://www.encodeproject.org/files/ENCFF564WXV/@@download/ENCFF564WXV.bam ENCFF068RBY https://www.encodeproject.org/files/ENCFF068RBY/@@download/ENCFF068RBY.bam 16.5 M 0 16.2 M 0.981 SE 36 None 0.0 M 12.8 M 11.7 M 0.709 0.91 0.91 11.68 215 1.57 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0708fa8-e7d5-4c2c-bfe0-e296ec545b3a/@@download/cross_correlation_plot/ENCFF000VCQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB540GRS ENCFF000VCQ Illumina Genome Analyzer 2016-07-13T02:51:44.411709+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4YQ0369J3ZgYzbyK4zV0 ENCSR000EUT https://www.encodeproject.org/experiments/ENCSR000EUT "histone,histone modification,narrow histone mark" H3K27ac-human HCT116 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF483YGT https://www.encodeproject.org/files/ENCFF483YGT/@@download/ENCFF483YGT.bam ENCFF577INZ https://www.encodeproject.org/files/ENCFF577INZ/@@download/ENCFF577INZ.bam 25.9 M 0 25.7 M 0.993 SE 36 None 0.0 M 21.0 M 19.2 M 0.744 0.92 0.92 13.76 210 1.30 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef083f31-4697-47d4-b0f0-ab9aa8131873/@@download/cross_correlation_plot/ENCFF000VCS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB948QLG ENCFF000VCS Illumina Genome Analyzer 2016-07-13T02:52:26.235699+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4f80369J3ZgYzbyK4zVK ENCSR000FCQ https://www.encodeproject.org/experiments/ENCSR000FCQ "histone,histone modification,broad histone mark" H3K36me3-human HCT116 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF755AFR https://www.encodeproject.org/files/ENCFF755AFR/@@download/ENCFF755AFR.bam ENCFF354HAT https://www.encodeproject.org/files/ENCFF354HAT/@@download/ENCFF354HAT.bam 39.9 M 0 39.1 M 0.979 SE 36 36 native 0.0 M 30.3 M 29.2 M 0.732 0.96 0.97 29.32 0 1.02 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/623897dd-7a0e-4d6f-a9ea-b5feba79cf4a/@@download/cross_correlation_plot/ENCFF002AAO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABU "peggy-farnham:USC339*_H3K36me3_HCT116_Rep1,peggy-farnham:USC339*" ENCFF002AAO Illumina Genome Analyzer IIx 2016-10-26T17:37:27.406918+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Pb0036923pJJqk9xzYyP ENCSR000FCQ https://www.encodeproject.org/experiments/ENCSR000FCQ "histone,histone modification,broad histone mark" H3K36me3-human HCT116 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF100UEE https://www.encodeproject.org/files/ENCFF100UEE/@@download/ENCFF100UEE.bam ENCFF722LYU https://www.encodeproject.org/files/ENCFF722LYU/@@download/ENCFF722LYU.bam 23.5 M 0 22.5 M 0.955 SE 36 36 native 0.0 M 17.3 M 15.5 M 0.660 0.91 0.92 12.65 130 1.03 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad29381e-0368-4de7-aa6f-0768e2233cfc/@@download/cross_correlation_plot/ENCFF002AAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABV "peggy-farnham:USC347*,peggy-farnham:USC347*_H3K36me3_HCT116_Rep2" ENCFF002AAN Illumina Genome Analyzer IIx 2016-10-26T17:35:48.971773+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Pk8036923pJJqk9xzYyy ENCSR000EUS https://www.encodeproject.org/experiments/ENCSR000EUS "histone,histone modification,broad histone mark" H3K4me1-human HCT116 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF380BQC https://www.encodeproject.org/files/ENCFF380BQC/@@download/ENCFF380BQC.bam ENCFF933ABG https://www.encodeproject.org/files/ENCFF933ABG/@@download/ENCFF933ABG.bam 31.3 M 0 30.9 M 0.989 SE 36 36 native 0.0 M 24.2 M 23.0 M 0.735 0.95 0.95 20.05 185 1.03 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/5cc6c89b-9c19-46a1-b78e-30d3e1a5e367/@@download/cross_correlation_plot/ENCFF000VCI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB560HNU ENCFF000VCI Illumina Genome Analyzer II 2016-10-26T17:36:20.710251+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Pz803699pQzk2JB6K7zq ENCSR000EUS https://www.encodeproject.org/experiments/ENCSR000EUS "histone,histone modification,broad histone mark" H3K4me1-human HCT116 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF270OJI https://www.encodeproject.org/files/ENCFF270OJI/@@download/ENCFF270OJI.bam ENCFF885XNB https://www.encodeproject.org/files/ENCFF885XNB/@@download/ENCFF885XNB.bam 31.1 M 0 30.7 M 0.988 SE 36 36 native 0.0 M 24.3 M 23.3 M 0.749 0.96 0.96 24.40 190 1.07 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/d3a81474-1e4a-419f-8ddb-3835bad7c81d/@@download/cross_correlation_plot/ENCFF000VCK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB743RMV ENCFF000VCK Illumina Genome Analyzer II 2016-10-26T17:35:54.284666+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Q580369BqVfYq19ZB943 ENCSR000FCP https://www.encodeproject.org/experiments/ENCSR000FCP "histone,histone modification,broad histone mark" H3K9me3-human HCT116 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF149GBJ https://www.encodeproject.org/files/ENCFF149GBJ/@@download/ENCFF149GBJ.bam ENCFF849HMO https://www.encodeproject.org/files/ENCFF849HMO/@@download/ENCFF849HMO.bam 38.1 M 0 37.3 M 0.978 SE 36 36 36 0.0 M 26.7 M 25.7 M 0.675 0.96 0.97 30.89 180 1.01 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ce38146-4b5b-4167-96c9-3733cc707b7f/@@download/cross_correlation_plot/ENCFF002AAK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABS "peggy-farnham:USC340*,peggy-farnham:USC340*_H3K9me3_HCT116_Rep1" ENCFF002AAK Illumina Genome Analyzer IIx 2016-11-05T17:34:36.783291+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkZgQ0369P6G90pZB0zz0K ENCSR000FCP https://www.encodeproject.org/experiments/ENCSR000FCP "histone,histone modification,broad histone mark" H3K9me3-human HCT116 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF440PQX https://www.encodeproject.org/files/ENCFF440PQX/@@download/ENCFF440PQX.bam ENCFF291MDD https://www.encodeproject.org/files/ENCFF291MDD/@@download/ENCFF291MDD.bam 37.0 M 0 36.3 M 0.982 SE 50 36 36 0.0 M 24.8 M 24.2 M 0.655 0.98 0.98 49.27 0 1.01 0.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6f3c1c7-4826-4bcd-b5dc-42df3b730178/@@download/cross_correlation_plot/ENCFF002AAM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABT "peggy-farnham:USC442,peggy-farnham:USC442_H3K9me3_HCT116_Rep2" ENCFF002AAM HiSeq 2000 2016-11-05T17:35:01.932763+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0KkZq8036954FbBZ1bGf29P ENCSR000EUU https://www.encodeproject.org/experiments/ENCSR000EUU transcription factor POLR2A-human HCT116 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF876UIJ https://www.encodeproject.org/files/ENCFF876UIJ/@@download/ENCFF876UIJ.bam ENCFF676HZV https://www.encodeproject.org/files/ENCFF676HZV/@@download/ENCFF676HZV.bam 10.0 M 0 9.8 M 0.981 SE 32 32 native 0.0 M 7.4 M 7.2 M 0.723 0.98 0.99 77.51 90 1.37 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2ba84a6-bc68-487d-b0cf-5b679d05f4e6/@@download/cross_correlation_plot/ENCFF000WXI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB594VMH ENCFF000WXI Illumina Genome Analyzer 2017-07-27T23:12:40.436142+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5x62600369Pz04y4pZ59zxK ENCSR000EUU https://www.encodeproject.org/experiments/ENCSR000EUU transcription factor POLR2A-human HCT116 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF339ZRD https://www.encodeproject.org/files/ENCFF339ZRD/@@download/ENCFF339ZRD.bam ENCFF569TNR https://www.encodeproject.org/files/ENCFF569TNR/@@download/ENCFF569TNR.bam 8.2 M 0 5.9 M 0.724 SE 32 32 native 0.0 M 4.3 M 4.2 M 0.515 0.99 0.99 73.61 170 1.22 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/f00c56a6-8e75-4dc5-ac7b-fa19f7caa71a/@@download/cross_correlation_plot/ENCFF000WXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB990PEE ENCFF000WXG Illumina Genome Analyzer 2017-07-27T23:06:12.573171+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5x629803699Kkyq4x6xkQgY ENCSR000EUV https://www.encodeproject.org/experiments/ENCSR000EUV transcription factor TCF7L2-human HCT116 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF470XCI https://www.encodeproject.org/files/ENCFF470XCI/@@download/ENCFF470XCI.bam ENCFF288OXH https://www.encodeproject.org/files/ENCFF288OXH/@@download/ENCFF288OXH.bam 12.2 M 0 11.7 M 0.957 SE 32 32 native 0.0 M 8.7 M 8.1 M 0.665 0.94 0.95 21.29 135 2.55 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd5ac01d-234a-4af3-81b3-8712f20ab146/@@download/cross_correlation_plot/ENCFF000WXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB605MYV ENCFF000WXH Illumina Genome Analyzer IIx 2017-07-27T23:04:42.625206+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5x61Pj03697xqFV1BYKY339 ENCSR000EUV https://www.encodeproject.org/experiments/ENCSR000EUV transcription factor TCF7L2-human HCT116 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF690REU https://www.encodeproject.org/files/ENCFF690REU/@@download/ENCFF690REU.bam ENCFF040UFM https://www.encodeproject.org/files/ENCFF040UFM/@@download/ENCFF040UFM.bam 6.7 M 0 6.5 M 0.974 SE 32 32 native 0.0 M 4.7 M 4.6 M 0.691 0.98 0.98 57.82 150 2.13 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/051ad5ae-651d-45c6-a25f-86038db4d7da/@@download/cross_correlation_plot/ENCFF000WXJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB075SCF ENCFF000WXJ Illumina Genome Analyzer IIx 2017-07-27T23:03:38.948816+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5x61Xj0369Pqx174vX8k6Qz ENCSR101FJM https://www.encodeproject.org/experiments/ENCSR101FJM transcription factor ZNF274-human HCT116 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF590IYB https://www.encodeproject.org/files/ENCFF590IYB/@@download/ENCFF590IYB.bam ENCFF759BNZ https://www.encodeproject.org/files/ENCFF759BNZ/@@download/ENCFF759BNZ.bam 26.0 M 0 25.7 M 0.991 SE 36 36 native 0.0 M 19.8 M 15.9 M 0.611 0.81 0.82 6.07 -5 1.01 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/fef58817-08c6-4e9d-bd4a-0b40a96fa565/@@download/cross_correlation_plot/ENCFF002AAP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABW "peggy-farnham:USC427,peggy-farnham:USC427_ZNF274_HCT116_Rep1" ENCFF002AAP Illumina Genome Analyzer IIx 2016-12-11T04:24:42.858888+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165XF00369445BJJ915X9qg ENCSR101FJM https://www.encodeproject.org/experiments/ENCSR101FJM transcription factor ZNF274-human HCT116 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF097NLT https://www.encodeproject.org/files/ENCFF097NLT/@@download/ENCFF097NLT.bam ENCFF640BIS https://www.encodeproject.org/files/ENCFF640BIS/@@download/ENCFF640BIS.bam 40.1 M 0 39.6 M 0.988 SE 36 36 native 0.0 M 29.8 M 29.3 M 0.732 0.98 0.99 74.03 0 1.01 0.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c6f48a7-e86d-4225-8945-388f3b23fc52/@@download/cross_correlation_plot/ENCFF002AAU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABX "peggy-farnham:USC428_ZNF274_HCT116_Rep2,peggy-farnham:USC428" ENCFF002AAU Illumina Genome Analyzer IIx 2016-12-11T04:37:03.642545+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165XJj0369BgG8x1ygv1XQJ ENCSR000EVA https://www.encodeproject.org/experiments/ENCSR000EVA control Control-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF144WYV https://www.encodeproject.org/files/ENCFF144WYV/@@download/ENCFF144WYV.bam ENCFF474FIQ https://www.encodeproject.org/files/ENCFF474FIQ/@@download/ENCFF474FIQ.bam 30.9 M 0 27.0 M 0.874 SE 32 32 None 0.0 M 19.7 M 18.2 M 0.591 0.93 0.93 16.42 300 1.01 0.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d087c14-258c-4027-a919-4b34e0eab9de/@@download/cross_correlation_plot/ENCFF000WXY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB801JYR ENCFF000WXY Illumina Genome Analyzer 2016-07-13T02:44:56.856698+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z7V803691y3B9QkZQBYJk ENCSR000EVC https://www.encodeproject.org/experiments/ENCSR000EVC control Control-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF914STU https://www.encodeproject.org/files/ENCFF914STU/@@download/ENCFF914STU.bam ENCFF299YGP https://www.encodeproject.org/files/ENCFF299YGP/@@download/ENCFF299YGP.bam 105.8 M 0 98.2 M 0.928 SE 36 36 None 0.0 M 75.6 M 70.7 M 0.668 0.94 0.94 18.10 185 1.01 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca327b62-b0c3-4667-b02d-bb7dfba1a77f/@@download/cross_correlation_plot/ENCFF000WZC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB301RNK ENCFF000WZC Illumina Genome Analyzer 2016-05-31T19:43:52.183105+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx4KKY8036900vKzZ5QZQ6bX ENCSR938LXW https://www.encodeproject.org/experiments/ENCSR938LXW control Control-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF643ELQ https://www.encodeproject.org/files/ENCFF643ELQ/@@download/ENCFF643ELQ.bam ENCFF473CDC https://www.encodeproject.org/files/ENCFF473CDC/@@download/ENCFF473CDC.bam 40.0 M 0 35.7 M 0.892 SE 32 32 native 0.0 M 27.0 M 24.3 M 0.609 0.91 0.91 10.48 140 1.02 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/80cbe16a-7843-439f-a1cc-5bf83d41a535/@@download/cross_correlation_plot/ENCFF000VLG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB204MWY ENCFF000VLG Illumina Genome Analyzer 2016-10-29T18:03:21.558125+00:00 released unreviewed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xzP80jv1yxbFbzV9pxxZK ENCSR000EVB https://www.encodeproject.org/experiments/ENCSR000EVB transcription factor ELK4-human HEK293 immortalized cell line peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000FCH https://www.encodeproject.org/experiments/ENCSR000FCH "histone,histone modification,narrow histone mark" H3K27ac-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF588KSR https://www.encodeproject.org/files/ENCFF588KSR/@@download/ENCFF588KSR.bam ENCFF990TMG https://www.encodeproject.org/files/ENCFF990TMG/@@download/ENCFF990TMG.bam 6.4 M 0 6.3 M 0.979 SE 36 None 0.0 M 5.2 M 4.9 M 0.761 0.94 0.94 16.67 240 2.02 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/91905ecd-5dea-4ae0-a192-245031322f42/@@download/cross_correlation_plot/ENCFF002ABA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACG "peggy-farnham:USC152_H3K27Ac_293T_Rep1,peggy-farnham:USC152" ENCFF002ABA Illumina Genome Analyzer IIx 2016-07-13T02:43:12.580394+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z78j036902Vz1B1Zb0kYq ENCSR000FCH https://www.encodeproject.org/experiments/ENCSR000FCH "histone,histone modification,narrow histone mark" H3K27ac-human HEK293 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF016LAV https://www.encodeproject.org/files/ENCFF016LAV/@@download/ENCFF016LAV.bam ENCFF650QOV https://www.encodeproject.org/files/ENCFF650QOV/@@download/ENCFF650QOV.bam 17.6 M 0 17.3 M 0.980 SE 36 None 0.0 M 13.6 M 12.4 M 0.705 0.92 0.92 12.13 165 1.15 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/843cab42-09be-4790-9110-b84343b341ad/@@download/cross_correlation_plot/ENCFF002ABC-ENCFF002AAY_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACH "peggy-farnham:USC248,peggy-farnham:USC248_H3K27Ac_293T_Rep2" "ENCFF002ABC,ENCFF002AAY" Illumina Genome Analyzer IIx 2016-07-13T02:43:49.328659+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z7FQ03691y3B9QkZQBYJJ ENCSR000FCK https://www.encodeproject.org/experiments/ENCSR000FCK "histone,histone modification,broad histone mark" H3K36me3-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF270RFU https://www.encodeproject.org/files/ENCFF270RFU/@@download/ENCFF270RFU.bam ENCFF381ZMB https://www.encodeproject.org/files/ENCFF381ZMB/@@download/ENCFF381ZMB.bam 21.2 M 0 20.7 M 0.976 SE 36 36 native 0.0 M 11.5 M 10.8 M 0.512 0.95 0.95 19.76 400 1.10 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/18413486-9d83-4fa1-a2f6-1b34bc7390d5/@@download/cross_correlation_plot/ENCFF002ABD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACI "peggy-farnham:USC187,peggy-farnham:USC187_H3K36me3_293T_Rep1" ENCFF002ABD Illumina Genome Analyzer IIx 2016-10-26T17:37:29.952822+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082FB803697KPkyX9BPPq4f ENCSR000FCK https://www.encodeproject.org/experiments/ENCSR000FCK "histone,histone modification,broad histone mark" H3K36me3-human HEK293 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF915ZJP https://www.encodeproject.org/files/ENCFF915ZJP/@@download/ENCFF915ZJP.bam ENCFF999TSS https://www.encodeproject.org/files/ENCFF999TSS/@@download/ENCFF999TSS.bam 30.5 M 0 30.1 M 0.987 SE 36 36 native 0.0 M 23.6 M 22.2 M 0.726 0.94 0.95 18.64 210 1.02 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/69e99939-5254-42d2-a05f-fa2acc0fbc49/@@download/cross_correlation_plot/ENCFF002ABE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACJ "peggy-farnham:USC368,peggy-farnham:USC368_H3K36me3_293T_Rep2" ENCFF002ABE Illumina Genome Analyzer IIx 2016-10-26T17:38:35.370737+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082FKQ036923z1QYVBPkq82 ENCSR910LIE https://www.encodeproject.org/experiments/ENCSR910LIE "histone,histone modification,broad histone mark" H3K36me3-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF958BTS https://www.encodeproject.org/files/ENCFF958BTS/@@download/ENCFF958BTS.bam ENCFF679AAG https://www.encodeproject.org/files/ENCFF679AAG/@@download/ENCFF679AAG.bam 45.6 M 0 38.8 M 0.852 SE 36 36 native 0.0 M 29.3 M 28.3 M 0.620 0.96 0.96 28.46 200 1.11 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d47bba7-5256-4982-a9cd-a17f5b7bf745/@@download/cross_correlation_plot/ENCFF000VKZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB357IIW ENCFF000VKZ Illumina Genome Analyzer II 2016-10-26T17:38:19.697692+00:00 released unreviewed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Jj00369FvKVQXxFJj29V ENCSR910LIE https://www.encodeproject.org/experiments/ENCSR910LIE "histone,histone modification,broad histone mark" H3K36me3-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF535AGI https://www.encodeproject.org/files/ENCFF535AGI/@@download/ENCFF535AGI.bam ENCFF590LYA https://www.encodeproject.org/files/ENCFF590LYA/@@download/ENCFF590LYA.bam 35.5 M 0 31.6 M 0.890 SE 36 36 native 0.0 M 23.7 M 22.8 M 0.643 0.96 0.96 27.60 200 1.13 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/36eac6b6-436a-4e05-b207-eb35fcbec460/@@download/cross_correlation_plot/ENCFF000VKY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB374EJC ENCFF000VKY Illumina Genome Analyzer II 2016-10-26T17:37:36.595548+00:00 released unreviewed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Jz003694qqQFPkFPzyfG ENCSR000FCG https://www.encodeproject.org/experiments/ENCSR000FCG "histone,histone modification,broad histone mark" H3K4me1-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF909ESY https://www.encodeproject.org/files/ENCFF909ESY/@@download/ENCFF909ESY.bam ENCFF273ATA https://www.encodeproject.org/files/ENCFF273ATA/@@download/ENCFF273ATA.bam 11.2 M 0 10.8 M 0.969 SE 36 36 native 0.0 M 8.8 M 7.5 M 0.673 0.86 0.85 6.67 215 1.07 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/47238e80-a432-4f61-9a3f-fcada4cca5df/@@download/cross_correlation_plot/ENCFF002AAV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACC "peggy-farnham:USC151_H3K4me1_293T_Rep1,peggy-farnham:USC151" ENCFF002AAV Illumina Genome Analyzer IIx 2016-10-26T17:58:25.226258+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0822gj03695YX1xgJBKFBZj ENCSR000FCG https://www.encodeproject.org/experiments/ENCSR000FCG "histone,histone modification,broad histone mark" H3K4me1-human HEK293 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF115NAM https://www.encodeproject.org/files/ENCFF115NAM/@@download/ENCFF115NAM.bam ENCFF408IBS https://www.encodeproject.org/files/ENCFF408IBS/@@download/ENCFF408IBS.bam 32.9 M 0 32.6 M 0.991 SE 36 36 native 0.0 M 26.2 M 25.0 M 0.760 0.95 0.95 21.64 165 1.04 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/c651f6a4-ed2f-4493-a869-20dd5b8e9519/@@download/cross_correlation_plot/ENCFF002AAW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACD "peggy-farnham:USC221,peggy-farnham:USC221_H3K4me1_293T_Rep2" ENCFF002AAW Illumina Genome Analyzer IIx 2016-10-26T17:58:56.918287+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0822vj03697KPkyX9BPPpyY ENCSR000FCJ https://www.encodeproject.org/experiments/ENCSR000FCJ "histone,histone modification,broad histone mark" H3K9me3-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF141ZEQ https://www.encodeproject.org/files/ENCFF141ZEQ/@@download/ENCFF141ZEQ.bam ENCFF072JON https://www.encodeproject.org/files/ENCFF072JON/@@download/ENCFF072JON.bam 37.5 M 0 37.0 M 0.988 SE 36 36 native 0.0 M 26.1 M 25.5 M 0.680 0.98 0.98 42.97 150 1.01 0.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1101375-aa04-43fd-b6d5-834bc1db5a17/@@download/cross_correlation_plot/ENCFF002AAZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACE "peggy-farnham:USC174,peggy-farnham:USC174_H3K9me3_293T_Rep1" ENCFF002AAZ Illumina Genome Analyzer IIx 2016-10-26T17:37:33.708882+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0828V00369BX1xqb1B808j7 ENCSR000FCJ https://www.encodeproject.org/experiments/ENCSR000FCJ "histone,histone modification,broad histone mark" H3K9me3-human HEK293 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF206NTG https://www.encodeproject.org/files/ENCFF206NTG/@@download/ENCFF206NTG.bam ENCFF086HYJ https://www.encodeproject.org/files/ENCFF086HYJ/@@download/ENCFF086HYJ.bam 33.8 M 0 33.4 M 0.989 SE 36 36 native 0.0 M 23.8 M 22.1 M 0.654 0.93 0.93 14.42 180 1.02 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0e9c09b-3517-4887-ba12-8265737f25b8/@@download/cross_correlation_plot/ENCFF002AAX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACF "peggy-farnham:USC304,peggy-farnham:USC304_H3K9me3_293T_Rep2" ENCFF002AAX Illumina Genome Analyzer IIx 2016-10-26T17:37:33.397172+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0828bj03699pQzk2JB6K7vb ENCSR348AGV https://www.encodeproject.org/experiments/ENCSR348AGV transcription factor SETDB1-human HEK293 immortalized cell line peggy-farnham ENCODE2 pending SE "32,36" Illumina Genome Analyzer unreviewed ENCSR000EUY https://www.encodeproject.org/experiments/ENCSR000EUY transcription factor TCF7L2-human HEK293 immortalized cell line peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer IIx unreviewed ENCSR000EUZ https://www.encodeproject.org/experiments/ENCSR000EUZ transcription factor TRIM28-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF592HXS https://www.encodeproject.org/files/ENCFF592HXS/@@download/ENCFF592HXS.bam ENCFF751NUI https://www.encodeproject.org/files/ENCFF751NUI/@@download/ENCFF751NUI.bam 91.4 M 0 45.7 M 0.500 SE 36 32 32 0.0 M 33.9 M 31.6 M 0.345 0.93 0.93 14.51 285 1.05 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/4bd9e4f9-be88-4aa5-b4ba-9bec6de7adb0/@@download/cross_correlation_plot/ENCFF000WYW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB920PRJ ENCFF000WYW Illumina Genome Analyzer 2016-10-24T15:32:01.063421+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042Q4Q0jv1bzxZFvxkJfq8Q ENCSR000EUZ https://www.encodeproject.org/experiments/ENCSR000EUZ transcription factor TRIM28-human HEK293 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF858WNV https://www.encodeproject.org/files/ENCFF858WNV/@@download/ENCFF858WNV.bam ENCFF005BXI https://www.encodeproject.org/files/ENCFF005BXI/@@download/ENCFF005BXI.bam 69.4 M 0 55.9 M 0.806 SE 36 32 32 0.0 M 39.6 M 38.4 M 0.553 0.97 0.97 33.79 350 1.05 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb7f96d2-448b-4ecb-8531-9f0872d5eadd/@@download/cross_correlation_plot/ENCFF000WYV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB870LTI ENCFF000WYV Illumina Genome Analyzer 2016-10-24T15:33:10.102844+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042Q680jv1YQJGQKQ3G01xX ENCSR618HNF https://www.encodeproject.org/experiments/ENCSR618HNF transcription factor TRIM28-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF358OUL https://www.encodeproject.org/files/ENCFF358OUL/@@download/ENCFF358OUL.bam ENCFF955BDG https://www.encodeproject.org/files/ENCFF955BDG/@@download/ENCFF955BDG.bam 31.6 M 0 28.2 M 0.892 SE 32 32 32 0.0 M 21.7 M 19.1 M 0.603 0.88 0.88 8.24 255 1.07 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/33a345e2-c2e6-4433-9274-55ced19ebdbc/@@download/cross_correlation_plot/ENCFF000ZTJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB489AZY ENCFF000ZTJ Illumina Genome Analyzer 2016-10-28T23:09:09.913203+00:00 released unreviewed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042PGQ0jv1yYp8Kq8FK5ybG ENCSR618HNF https://www.encodeproject.org/experiments/ENCSR618HNF transcription factor TRIM28-human HEK293 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF939YGI https://www.encodeproject.org/files/ENCFF939YGI/@@download/ENCFF939YGI.bam ENCFF840IZH https://www.encodeproject.org/files/ENCFF840IZH/@@download/ENCFF840IZH.bam 59.7 M 0 44.8 M 0.750 SE 32 32 32 0.0 M 33.8 M 32.3 M 0.541 0.95 0.95 22.19 260 1.03 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/575421bb-f16b-4d56-a508-58e87555f718/@@download/cross_correlation_plot/ENCFF000ZTO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB653BCM ENCFF000ZTO Illumina Genome Analyzer 2016-10-28T23:10:09.224792+00:00 released unreviewed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042PK80jv1ypz33Z03QvJB5 ENCSR000EVD https://www.encodeproject.org/experiments/ENCSR000EVD transcription factor ZNF263-human HEK293 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF554BHA https://www.encodeproject.org/files/ENCFF554BHA/@@download/ENCFF554BHA.bam ENCFF610KXZ https://www.encodeproject.org/files/ENCFF610KXZ/@@download/ENCFF610KXZ.bam 31.1 M 0 22.2 M 0.714 SE 36 36 None 0.0 M 17.4 M 16.9 M 0.541 0.97 0.97 41.98 220 1.39 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/ac4658e9-61c3-4f6b-adb8-e083566fcc63/@@download/cross_correlation_plot/ENCFF000WYY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB815HGW ENCFF000WYY Illumina Genome Analyzer 2016-05-31T19:40:09.809060+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx4KKBj03691qf0ypQkB20B0 ENCSR000EVD https://www.encodeproject.org/experiments/ENCSR000EVD transcription factor ZNF263-human HEK293 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF282LOM https://www.encodeproject.org/files/ENCFF282LOM/@@download/ENCFF282LOM.bam ENCFF048QGM https://www.encodeproject.org/files/ENCFF048QGM/@@download/ENCFF048QGM.bam 35.4 M 0 23.0 M 0.650 SE 32 32 None 0.0 M 17.2 M 16.8 M 0.475 0.98 0.98 51.32 255 1.23 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/2035ebd1-9d83-4bdc-8d1b-6a5ce3533227/@@download/cross_correlation_plot/ENCFF000WZA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB379RRM ENCFF000WZA Illumina Genome Analyzer 2016-05-31T19:40:34.568996+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bx4KKGj036942fxGZZk3PqpJ ENCSR000FCI https://www.encodeproject.org/experiments/ENCSR000FCI transcription factor ZNF274-human HEK293 immortalized cell line peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer IIx unreviewed ENCSR000EVH https://www.encodeproject.org/experiments/ENCSR000EVH control Control-human HeLa-S3 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF040BSG https://www.encodeproject.org/files/ENCFF040BSG/@@download/ENCFF040BSG.bam ENCFF692XZV https://www.encodeproject.org/files/ENCFF692XZV/@@download/ENCFF692XZV.bam 27.1 M 0 26.7 M 0.984 SE 32 32 native 0.0 M 19.5 M 19.3 M 0.710 0.99 0.99 100.95 105 1.02 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2b9576b-f294-4a1e-972f-55134b181e09/@@download/cross_correlation_plot/ENCFF000XGR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB815PYQ ENCFF000XGR Illumina Genome Analyzer II 2016-10-26T17:42:12.440426+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829fj0369GJ6xQfbB7BkV8 ENCSR000EVJ https://www.encodeproject.org/experiments/ENCSR000EVJ transcription factor E2F1-human HeLa-S3 immortalized cell line peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EVL https://www.encodeproject.org/experiments/ENCSR000EVL transcription factor E2F4-human HeLa-S3 immortalized cell line peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EVK https://www.encodeproject.org/experiments/ENCSR000EVK transcription factor E2F6-human HeLa-S3 immortalized cell line peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EVI https://www.encodeproject.org/experiments/ENCSR000EVI transcription factor ELK4-human HeLa-S3 immortalized cell line peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EVM https://www.encodeproject.org/experiments/ENCSR000EVM "recombinant protein,transcription factor" HA-E2F1-human HeLa-S3 immortalized cell line peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EVN https://www.encodeproject.org/experiments/ENCSR000EVN transcription factor NR2C2-human HeLa-S3 immortalized cell line peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EVE https://www.encodeproject.org/experiments/ENCSR000EVE transcription factor TCF7L2-human HeLa-S3 immortalized cell line peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EVF https://www.encodeproject.org/experiments/ENCSR000EVF transcription factor TCF7L2-human HeLa-S3 immortalized cell line peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer II unreviewed ENCSR000EVG https://www.encodeproject.org/experiments/ENCSR000EVG transcription factor ZNF274-human HeLa-S3 immortalized cell line peggy-farnham ENCODE2 pending SE "32,36" Illumina Genome Analyzer unreviewed ENCSR000EVT https://www.encodeproject.org/experiments/ENCSR000EVT control Control-human HepG2 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF823ARV https://www.encodeproject.org/files/ENCFF823ARV/@@download/ENCFF823ARV.bam ENCFF023RXC https://www.encodeproject.org/files/ENCFF023RXC/@@download/ENCFF023RXC.bam 28.0 M 0 23.3 M 0.831 SE 32 32 native 0.0 M 15.8 M 15.6 M 0.556 0.99 0.99 110.23 80 1.01 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff9e9368-ea42-44a2-b6bd-eefd2cb81b2b/@@download/cross_correlation_plot/ENCFF000XTE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB213AYL ENCFF000XTE Illumina Genome Analyzer II 2016-10-26T17:35:56.442916+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082ZY003694q32PPxBJ67Y2 ENCSR000EVS https://www.encodeproject.org/experiments/ENCSR000EVS transcription factor NR2C2-human HepG2 immortalized cell line peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EVQ https://www.encodeproject.org/experiments/ENCSR000EVQ transcription factor TCF7L2-human HepG2 immortalized cell line peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer IIx unreviewed ENCSR000EVR https://www.encodeproject.org/experiments/ENCSR000EVR transcription factor ZNF274-human HepG2 immortalized cell line peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EWK https://www.encodeproject.org/experiments/ENCSR000EWK control Control-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF355SGP https://www.encodeproject.org/files/ENCFF355SGP/@@download/ENCFF355SGP.bam ENCFF390OZW https://www.encodeproject.org/files/ENCFF390OZW/@@download/ENCFF390OZW.bam 36.4 M 0 36.1 M 0.991 SE 28 28 None 0.0 M 25.9 M 25.5 M 0.700 0.99 0.99 103.93 -10 1.01 0.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/04bf32b6-4e90-43d2-9bb6-e891b515b12c/@@download/cross_correlation_plot/ENCFF000VEK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB478OOB ENCFF000VEK Illumina Genome Analyzer 2016-07-28T00:32:44.137949+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGY4kQ0369Gfk3ZV012F4FV ENCSR000EWL https://www.encodeproject.org/experiments/ENCSR000EWL transcription factor E2F4-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF613CDR https://www.encodeproject.org/files/ENCFF613CDR/@@download/ENCFF613CDR.bam ENCFF843AGP https://www.encodeproject.org/files/ENCFF843AGP/@@download/ENCFF843AGP.bam 7.3 M 0 6.2 M 0.850 SE 27 27 27 0.0 M 3.6 M 3.4 M 0.460 0.93 0.94 16.50 120 1.74 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/88009777-c980-4192-b1db-ce8a9bd74ebf/@@download/cross_correlation_plot/ENCFF000YMI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB229CKW ENCFF000YMI Illumina Genome Analyzer 2016-11-23T06:48:37.246999+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pB72803693FYbx8kPqJFjx ENCSR000EWL https://www.encodeproject.org/experiments/ENCSR000EWL transcription factor E2F4-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF156NIH https://www.encodeproject.org/files/ENCFF156NIH/@@download/ENCFF156NIH.bam ENCFF718DAY https://www.encodeproject.org/files/ENCFF718DAY/@@download/ENCFF718DAY.bam 14.9 M 0 10.9 M 0.731 SE 27 27 27 0.0 M 7.0 M 6.3 M 0.425 0.92 0.92 11.99 95 1.45 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/b843e907-b163-4277-9b12-6febcfd6aa94/@@download/cross_correlation_plot/ENCFF000YMW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB502XKE ENCFF000YMW Illumina Genome Analyzer 2016-11-23T06:48:44.769181+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pB77003698Jzp9GGVf9X0v ENCSR000EWJ https://www.encodeproject.org/experiments/ENCSR000EWJ transcription factor E2F6-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF201BQU https://www.encodeproject.org/files/ENCFF201BQU/@@download/ENCFF201BQU.bam ENCFF122WQM https://www.encodeproject.org/files/ENCFF122WQM/@@download/ENCFF122WQM.bam 18.7 M 0 6.3 M 0.336 SE 27 27 native 0.0 M 4.2 M 4.0 M 0.213 0.96 0.97 35.59 110 3.75 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/b061cf0c-cfba-4298-9577-18838e7c5415/@@download/cross_correlation_plot/ENCFF000YNL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB259YUG ENCFF000YNL Illumina Genome Analyzer 2017-02-08T15:40:28.528524+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0v8Q03693xb2YFbkyf0xk ENCSR000EWJ https://www.encodeproject.org/experiments/ENCSR000EWJ transcription factor E2F6-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF011OSI https://www.encodeproject.org/files/ENCFF011OSI/@@download/ENCFF011OSI.bam ENCFF591ESQ https://www.encodeproject.org/files/ENCFF591ESQ/@@download/ENCFF591ESQ.bam 35.6 M 0 8.3 M 0.233 SE 32 32 native 0.0 M 5.6 M 5.3 M 0.150 0.95 0.95 24.61 125 2.41 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/205fec42-a4e7-4c8d-b166-ad01f0095b39/@@download/cross_correlation_plot/ENCFF000YMU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB992GQW ENCFF000YMU Illumina Genome Analyzer 2017-02-08T15:40:46.442403+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0vK003695F4J7Kj13KFjV ENCSR000EWM https://www.encodeproject.org/experiments/ENCSR000EWM transcription factor GATA1-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF642RHD https://www.encodeproject.org/files/ENCFF642RHD/@@download/ENCFF642RHD.bam ENCFF806OWK https://www.encodeproject.org/files/ENCFF806OWK/@@download/ENCFF806OWK.bam 6.4 M 0 6.0 M 0.947 SE 32 32 32 0.0 M 3.8 M 3.7 M 0.576 0.97 0.97 30.17 155 1.07 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0b3f072-909e-49cd-bd1c-cd3de38559b7/@@download/cross_correlation_plot/ENCFF000YMV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB244AWF ENCFF000YMV Illumina Genome Analyzer 2016-11-23T06:48:43.005860+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pB2f003690PqpBx4gP83Q9 ENCSR000EWM https://www.encodeproject.org/experiments/ENCSR000EWM transcription factor GATA1-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF788ICY https://www.encodeproject.org/files/ENCFF788ICY/@@download/ENCFF788ICY.bam ENCFF622HIJ https://www.encodeproject.org/files/ENCFF622HIJ/@@download/ENCFF622HIJ.bam 12.7 M 0 12.3 M 0.972 SE 32 32 32 0.0 M 8.5 M 8.4 M 0.660 0.99 0.99 74.56 120 1.10 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/66847765-cd69-467a-b1ca-eae6d140c62f/@@download/cross_correlation_plot/ENCFF000YNM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB307TEC ENCFF000YNM Illumina Genome Analyzer 2016-11-23T06:48:40.772577+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0pB2pj03696g3JFPVZGfYfg ENCSR000EWG https://www.encodeproject.org/experiments/ENCSR000EWG transcription factor GATA2-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF779CRV https://www.encodeproject.org/files/ENCFF779CRV/@@download/ENCFF779CRV.bam ENCFF252WPQ https://www.encodeproject.org/files/ENCFF252WPQ/@@download/ENCFF252WPQ.bam 17.4 M 0 12.1 M 0.698 SE 32 32 native 0.0 M 8.5 M 8.4 M 0.483 0.98 0.99 72.82 115 1.40 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/28f288a5-669c-42c5-bb52-e75ef8b0e8f3/@@download/cross_correlation_plot/ENCFF000YNY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB717NCC ENCFF000YNY Illumina Genome Analyzer 2017-02-08T15:51:20.967350+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0xZj0369P4VQpFPXJ8pJ2 ENCSR000EWG https://www.encodeproject.org/experiments/ENCSR000EWG transcription factor GATA2-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF340JWK https://www.encodeproject.org/files/ENCFF340JWK/@@download/ENCFF340JWK.bam ENCFF259SDS https://www.encodeproject.org/files/ENCFF259SDS/@@download/ENCFF259SDS.bam 16.9 M 0 12.2 M 0.721 SE 32 32 native 0.0 M 7.6 M 7.5 M 0.445 0.99 0.99 105.99 55 1.10 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb948e79-3e85-4b65-9029-f328be15d96e/@@download/cross_correlation_plot/ENCFF000YNZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB560PWM ENCFF000YNZ Illumina Genome Analyzer 2017-02-08T15:51:42.165151+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0xp803695F4J7Kj13KFjv ENCSR000EWB https://www.encodeproject.org/experiments/ENCSR000EWB "histone,histone modification,broad histone mark" H3K27me3-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF915XIL https://www.encodeproject.org/files/ENCFF915XIL/@@download/ENCFF915XIL.bam ENCFF347HXM https://www.encodeproject.org/files/ENCFF347HXM/@@download/ENCFF347HXM.bam 25.9 M 0 20.2 M 0.778 SE 36 28 28 0.0 M 12.9 M 12.1 M 0.465 0.93 0.93 14.79 285 1.11 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/8578f44b-ccea-49b7-ac21-5bf1ca7ae5ab/@@download/cross_correlation_plot/ENCFF000VDN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB951TBX ENCFF000VDN Illumina Genome Analyzer II 2016-08-05T20:40:14.774487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVpGGQ03692vv7bzQGGJQ1k ENCSR000EWB https://www.encodeproject.org/experiments/ENCSR000EWB "histone,histone modification,broad histone mark" H3K27me3-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF330YFF https://www.encodeproject.org/files/ENCFF330YFF/@@download/ENCFF330YFF.bam ENCFF433IGL https://www.encodeproject.org/files/ENCFF433IGL/@@download/ENCFF433IGL.bam 31.6 M 0 29.4 M 0.930 SE 36 28 28 0.0 M 21.0 M 20.1 M 0.637 0.96 0.96 23.94 290 1.04 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/80c19d16-1583-4f03-bbd0-df6747492c4c/@@download/cross_correlation_plot/ENCFF000VDP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB727SIV ENCFF000VDP Illumina Genome Analyzer II 2016-08-05T20:40:03.531761+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVpGKQ03693BgxGkvG0VJJg ENCSR000EWC https://www.encodeproject.org/experiments/ENCSR000EWC "histone,histone modification,broad histone mark" H3K4me1-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF290LQY https://www.encodeproject.org/files/ENCFF290LQY/@@download/ENCFF290LQY.bam ENCFF492KZX https://www.encodeproject.org/files/ENCFF492KZX/@@download/ENCFF492KZX.bam 14.0 M 0 12.7 M 0.908 SE 41 28 28 0.0 M 7.6 M 6.5 M 0.468 0.86 0.86 6.96 120 1.28 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/30981716-0ae0-4d0f-9e6a-a9defab680e7/@@download/cross_correlation_plot/ENCFF000VDV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB497KKU ENCFF000VDV Illumina Genome Analyzer II 2016-08-05T20:36:14.003761+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVpGV003692vv7bzQGGJQ24 ENCSR000EWC https://www.encodeproject.org/experiments/ENCSR000EWC "histone,histone modification,broad histone mark" H3K4me1-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF063EDR https://www.encodeproject.org/files/ENCFF063EDR/@@download/ENCFF063EDR.bam ENCFF538HAQ https://www.encodeproject.org/files/ENCFF538HAQ/@@download/ENCFF538HAQ.bam 36.2 M 0 32.1 M 0.885 SE 41 28 28 0.0 M 21.7 M 16.5 M 0.454 0.76 0.75 3.83 270 1.46 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec8f0e53-39f4-4499-b86b-108e9b315e15/@@download/cross_correlation_plot/ENCFF000VDU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB060JFJ ENCFF000VDU Illumina Genome Analyzer II 2016-08-05T20:36:21.114284+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVpGY003692vv7bzQGGJQ2K ENCSR000EWA https://www.encodeproject.org/experiments/ENCSR000EWA "histone,histone modification,narrow histone mark" H3K4me3-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF611YPB https://www.encodeproject.org/files/ENCFF611YPB/@@download/ENCFF611YPB.bam ENCFF411WVM https://www.encodeproject.org/files/ENCFF411WVM/@@download/ENCFF411WVM.bam 29.1 M 0 19.7 M 0.677 SE 36 28 28 0.0 M 13.8 M 10.9 M 0.376 0.79 0.81 5.74 190 2.94 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/a720bc21-df1b-43e1-96a9-3417ff90189c/@@download/cross_correlation_plot/ENCFF000VDX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB474AFW ENCFF000VDX Illumina Genome Analyzer II 2016-08-05T20:41:03.466300+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVpG6003690Q4yxxQGPjqK6 ENCSR000EWA https://www.encodeproject.org/experiments/ENCSR000EWA "histone,histone modification,narrow histone mark" H3K4me3-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF706SCF https://www.encodeproject.org/files/ENCFF706SCF/@@download/ENCFF706SCF.bam ENCFF184FII https://www.encodeproject.org/files/ENCFF184FII/@@download/ENCFF184FII.bam 37.3 M 0 33.1 M 0.886 SE 36 28 28 0.0 M 26.0 M 17.0 M 0.457 0.66 0.69 3.52 185 3.21 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/c51f0326-5333-40e8-a922-522706a6de61/@@download/cross_correlation_plot/ENCFF000VDY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB069TXP ENCFF000VDY Illumina Genome Analyzer II 2016-08-05T20:40:52.274674+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVpGB803692vv7bzQGGJQ1Q ENCSR000EVZ https://www.encodeproject.org/experiments/ENCSR000EVZ "histone,histone modification,narrow histone mark" H3K9ac-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF763ZGN https://www.encodeproject.org/files/ENCFF763ZGN/@@download/ENCFF763ZGN.bam ENCFF224XNI https://www.encodeproject.org/files/ENCFF224XNI/@@download/ENCFF224XNI.bam 29.3 M 0 20.0 M 0.683 SE 36 28 28 0.0 M 13.2 M 12.3 M 0.419 0.93 0.94 16.22 170 1.58 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c3b0f2b-8ba8-416f-9804-743302f570d5/@@download/cross_correlation_plot/ENCFF000VEE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB863FJH ENCFF000VEE Illumina Genome Analyzer 2016-11-15T00:12:23.539415+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b2G6Q03697qX9798yZFpQf ENCSR000EVZ https://www.encodeproject.org/experiments/ENCSR000EVZ "histone,histone modification,narrow histone mark" H3K9ac-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF236CJR https://www.encodeproject.org/files/ENCFF236CJR/@@download/ENCFF236CJR.bam ENCFF180UJE https://www.encodeproject.org/files/ENCFF180UJE/@@download/ENCFF180UJE.bam 39.2 M 0 34.9 M 0.889 SE 36 28 28 0.0 M 23.3 M 22.1 M 0.564 0.95 0.95 21.56 145 1.40 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/32546f52-f66d-42e5-8969-6474081ce462/@@download/cross_correlation_plot/ENCFF000VEG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB807QCN ENCFF000VEG Illumina Genome Analyzer 2016-11-15T00:12:24.696594+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b2GQQ0369Kzkv2p8jPVX8b ENCSR000EWH https://www.encodeproject.org/experiments/ENCSR000EWH transcription factor NR2C2-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF078BWN https://www.encodeproject.org/files/ENCFF078BWN/@@download/ENCFF078BWN.bam ENCFF169IGD https://www.encodeproject.org/files/ENCFF169IGD/@@download/ENCFF169IGD.bam 12.2 M 0 9.3 M 0.765 SE 32 32 native 0.0 M 6.3 M 6.2 M 0.509 0.99 0.99 113.74 120 1.03 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c5e5c7a-bb2a-419d-8887-4813046b0382/@@download/cross_correlation_plot/ENCFF000ZCP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB282LMZ ENCFF000ZCP Illumina Genome Analyzer 2017-02-07T17:07:16.645722+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GG68803693jxfkJ697gpv2 ENCSR000EWH https://www.encodeproject.org/experiments/ENCSR000EWH transcription factor NR2C2-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF771NSF https://www.encodeproject.org/files/ENCFF771NSF/@@download/ENCFF771NSF.bam ENCFF955CIQ https://www.encodeproject.org/files/ENCFF955CIQ/@@download/ENCFF955CIQ.bam 14.9 M 0 10.8 M 0.728 SE 32 32 native 0.0 M 6.9 M 6.9 M 0.462 0.99 0.99 117.50 120 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ca4381c-9dd0-46cf-a009-a08070d5582d/@@download/cross_correlation_plot/ENCFF000ZDC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB923NMC ENCFF000ZDC Illumina Genome Analyzer 2017-02-07T17:07:17.678416+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GG6Jj0369Jz5KzBYx51Xqx ENCSR000EWD https://www.encodeproject.org/experiments/ENCSR000EWD transcription factor SETDB1-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF829CHZ https://www.encodeproject.org/files/ENCFF829CHZ/@@download/ENCFF829CHZ.bam ENCFF150YTA https://www.encodeproject.org/files/ENCFF150YTA/@@download/ENCFF150YTA.bam 16.7 M 0 14.6 M 0.873 SE 32 32 native 0.0 M 9.7 M 9.6 M 0.572 0.98 0.98 68.83 -5 1.04 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5365e95-3d6b-4713-9d0f-0ca90424cb85/@@download/cross_correlation_plot/ENCFF000YZC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB873KRS ENCFF000YZC Illumina Genome Analyzer 2017-02-07T05:38:32.744138+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GGFJ00369200gbFPKvQJPk ENCSR000EWD https://www.encodeproject.org/experiments/ENCSR000EWD transcription factor SETDB1-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF765XRJ https://www.encodeproject.org/files/ENCFF765XRJ/@@download/ENCFF765XRJ.bam ENCFF761GRW https://www.encodeproject.org/files/ENCFF761GRW/@@download/ENCFF761GRW.bam 19.3 M 0 17.4 M 0.900 SE 32 32 native 0.0 M 12.3 M 10.3 M 0.534 0.84 0.84 5.89 150 1.09 5.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/00af9093-6ce4-4c22-b3b6-db5b112cb51d/@@download/cross_correlation_plot/ENCFF000YZB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB054WJM ENCFF000YZB Illumina Genome Analyzer 2017-02-07T05:38:41.521859+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2GGFXQ0369F13JyFQ4qVfqK ENCSR000EWI https://www.encodeproject.org/experiments/ENCSR000EWI transcription factor SETDB1-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF728IYF https://www.encodeproject.org/files/ENCFF728IYF/@@download/ENCFF728IYF.bam ENCFF701DUO https://www.encodeproject.org/files/ENCFF701DUO/@@download/ENCFF701DUO.bam 41.0 M 0 14.7 M 0.360 SE 32 32 native 0.0 M 9.5 M 8.8 M 0.216 0.93 0.93 13.73 165 1.06 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b6ee3c7-e332-4761-a617-962f06d0facf/@@download/cross_correlation_plot/ENCFF000YZH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB655DVW ENCFF000YZH Illumina Genome Analyzer 2017-02-08T15:44:56.314096+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0x4803696V163FPx50GGK ENCSR000EWI https://www.encodeproject.org/experiments/ENCSR000EWI transcription factor SETDB1-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF874YYW https://www.encodeproject.org/files/ENCFF874YYW/@@download/ENCFF874YYW.bam ENCFF534VEA https://www.encodeproject.org/files/ENCFF534VEA/@@download/ENCFF534VEA.bam 21.9 M 0 9.4 M 0.430 SE 32 32 native 0.0 M 6.2 M 6.2 M 0.283 0.99 0.99 111.89 105 1.07 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/98b1166b-8225-49d1-85c4-f4a3d2a5afc0/@@download/cross_correlation_plot/ENCFF000YZJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB283ZGM ENCFF000YZJ Illumina Genome Analyzer 2017-02-08T15:45:19.913007+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0xB803698KY2bKk7VpkBv ENCSR000EVY https://www.encodeproject.org/experiments/ENCSR000EVY transcription factor TRIM28-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF170NGB https://www.encodeproject.org/files/ENCFF170NGB/@@download/ENCFF170NGB.bam 52.5 M 0 20.1 M 0.382 SE 32 28 28 0.0 M 11.7 M 9.9 M 0.189 0.84 0.85 6.54 460 1.06 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2f5627f-0ab0-45c8-a063-0e918c4e4432/@@download/cross_correlation_plot/ENCFF000YSZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB016GSW ENCFF000YSZ Illumina Genome Analyzer 2016-10-24T15:32:30.752154+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042P680jv1yYp8Kq8FK5yb3 ENCSR000EVY https://www.encodeproject.org/experiments/ENCSR000EVY transcription factor TRIM28-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF426DLJ https://www.encodeproject.org/files/ENCFF426DLJ/@@download/ENCFF426DLJ.bam 18.1 M 0 16.3 M 0.902 SE 36 28 28 0.0 M 11.5 M 9.2 M 0.509 0.80 0.81 5.74 125 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/17b8aad8-9972-4a0b-92b3-7602c9bd0694/@@download/cross_correlation_plot/ENCFF000YTA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB817CMB ENCFF000YTA Illumina Genome Analyzer 2016-10-24T15:33:05.268325+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042P800jv1ypz33Z03QvJ9x ENCSR000EWF https://www.encodeproject.org/experiments/ENCSR000EWF transcription factor YY1-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF633CMO https://www.encodeproject.org/files/ENCFF633CMO/@@download/ENCFF633CMO.bam ENCFF741LGU https://www.encodeproject.org/files/ENCFF741LGU/@@download/ENCFF741LGU.bam 13.7 M 0 10.1 M 0.737 SE 32 32 native 0.0 M 6.4 M 6.2 M 0.452 0.97 0.97 38.83 80 1.27 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/78958ab3-f474-462c-913b-983d6e89f496/@@download/cross_correlation_plot/ENCFF000ZEJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB227PUP ENCFF000ZEJ Illumina Genome Analyzer 2017-01-24T19:09:49.431840+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4vyJJ00369KB1GGGPqgFkpF ENCSR000EWF https://www.encodeproject.org/experiments/ENCSR000EWF transcription factor YY1-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF139WUV https://www.encodeproject.org/files/ENCFF139WUV/@@download/ENCFF139WUV.bam ENCFF670LXM https://www.encodeproject.org/files/ENCFF670LXM/@@download/ENCFF670LXM.bam 15.2 M 0 9.7 M 0.637 SE 32 32 native 0.0 M 6.6 M 6.4 M 0.424 0.98 0.98 77.70 130 1.73 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d762115-e893-4bb5-bc60-399ba4bf883c/@@download/cross_correlation_plot/ENCFF000ZEK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB720LRB ENCFF000ZEK Illumina Genome Analyzer 2017-01-24T19:10:10.667180+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F4vyJQ803698kKBbGPz5ZkPJ ENCSR000EWN https://www.encodeproject.org/experiments/ENCSR000EWN transcription factor ZNF263-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF094FZQ https://www.encodeproject.org/files/ENCFF094FZQ/@@download/ENCFF094FZQ.bam ENCFF728UEJ https://www.encodeproject.org/files/ENCFF728UEJ/@@download/ENCFF728UEJ.bam 8.8 M 0 7.4 M 0.842 SE 27 27 native 0.0 M 4.4 M 4.3 M 0.491 0.97 0.97 40.58 195 1.29 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/ea1b01c0-340d-404e-a8be-17fe4f819eef/@@download/cross_correlation_plot/ENCFF000ZEX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB248XBC ENCFF000ZEX Illumina Genome Analyzer 2017-02-08T15:54:52.924137+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0pKj03698KY2bKk7VpkB4 ENCSR000EWN https://www.encodeproject.org/experiments/ENCSR000EWN transcription factor ZNF263-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF891GFG https://www.encodeproject.org/files/ENCFF891GFG/@@download/ENCFF891GFG.bam ENCFF594KMD https://www.encodeproject.org/files/ENCFF594KMD/@@download/ENCFF594KMD.bam 9.0 M 0 7.7 M 0.860 SE 27 27 native 0.0 M 4.7 M 4.6 M 0.509 0.97 0.97 36.34 195 1.27 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/742fc664-cef5-48cf-950a-e13222b7506a/@@download/cross_correlation_plot/ENCFF000ZEY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB969MWE ENCFF000ZEY Illumina Genome Analyzer 2017-02-08T15:55:10.941796+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0qQQ03694vx9yFzjV3y0F ENCSR000EVX https://www.encodeproject.org/experiments/ENCSR000EVX transcription factor ZNF274-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF444ZUH https://www.encodeproject.org/files/ENCFF444ZUH/@@download/ENCFF444ZUH.bam ENCFF568ZAY https://www.encodeproject.org/files/ENCFF568ZAY/@@download/ENCFF568ZAY.bam 37.8 M 0 37.6 M 0.993 SE 36 28 28 0.0 M 26.2 M 15.9 M 0.420 0.61 0.57 2.10 195 1.05 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/d94bbe21-88ca-4eb9-b35e-20074d44c64c/@@download/cross_correlation_plot/ENCFF000ZES-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB496BVC ENCFF000ZES Illumina Genome Analyzer 2017-02-21T16:22:16.874242+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2Vxv100369Gg2Vq3KqzKxxv ENCSR000EVX https://www.encodeproject.org/experiments/ENCSR000EVX transcription factor ZNF274-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF474ETY https://www.encodeproject.org/files/ENCFF474ETY/@@download/ENCFF474ETY.bam ENCFF587ARB https://www.encodeproject.org/files/ENCFF587ARB/@@download/ENCFF587ARB.bam 28.6 M 0 23.4 M 0.818 SE 36 28 28 0.0 M 17.7 M 12.0 M 0.420 0.68 0.67 2.97 195 1.07 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/23808921-0d1b-46ad-8137-26587202b5a6/@@download/cross_correlation_plot/ENCFF000ZEU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB068LQX ENCFF000ZEU Illumina Genome Analyzer 2017-02-21T16:22:43.105587+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2Vxv7003695Kyfj3xpk06y7 ENCSR000EWE https://www.encodeproject.org/experiments/ENCSR000EWE transcription factor ZNF274-human K562 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF419SAY https://www.encodeproject.org/files/ENCFF419SAY/@@download/ENCFF419SAY.bam ENCFF147WKQ https://www.encodeproject.org/files/ENCFF147WKQ/@@download/ENCFF147WKQ.bam 24.5 M 0 10.4 M 0.423 SE 32 32 native 0.0 M 7.0 M 7.0 M 0.283 1.00 1.00 284.99 140 1.04 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/4afe2442-8721-48dd-8033-9ae0fb4e1b15/@@download/cross_correlation_plot/ENCFF000ZFI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB157UIQ ENCFF000ZFI Illumina Genome Analyzer 2017-02-08T15:57:35.848394+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0y4803697G42vFQVBG0xp ENCSR000EWE https://www.encodeproject.org/experiments/ENCSR000EWE transcription factor ZNF274-human K562 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF917UQJ https://www.encodeproject.org/files/ENCFF917UQJ/@@download/ENCFF917UQJ.bam ENCFF421FAR https://www.encodeproject.org/files/ENCFF421FAR/@@download/ENCFF421FAR.bam 45.8 M 0 15.4 M 0.335 SE 32 32 native 0.0 M 9.3 M 9.2 M 0.200 0.99 0.99 98.53 120 1.03 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2911a5e-a24d-44b0-bfb3-5ec8a36469fd/@@download/cross_correlation_plot/ENCFF000ZFH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB814HPB ENCFF000ZFH Illumina Genome Analyzer 2017-02-08T15:58:01.491715+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J0yV00369200gbFPKvQZJ1 ENCSR000EWW https://www.encodeproject.org/experiments/ENCSR000EWW control Control-human MCF-7 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF076CJL https://www.encodeproject.org/files/ENCFF076CJL/@@download/ENCFF076CJL.bam ENCFF791WJU https://www.encodeproject.org/files/ENCFF791WJU/@@download/ENCFF791WJU.bam 18.7 M 0 15.0 M 0.803 SE 32 None 0.0 M 10.2 M 10.0 M 0.536 0.99 0.99 70.50 105 1.03 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5e3b465-ac9b-4034-b1a6-a27c95cd5584/@@download/cross_correlation_plot/ENCFF000VHL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB477GYD ENCFF000VHL Illumina Genome Analyzer 2016-07-13T02:51:39.260237+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4zj0369J3PqFp0Q88Xpq ENCSR000EWW https://www.encodeproject.org/experiments/ENCSR000EWW control Control-human MCF-7 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF839GWH https://www.encodeproject.org/files/ENCFF839GWH/@@download/ENCFF839GWH.bam ENCFF846QOW https://www.encodeproject.org/files/ENCFF846QOW/@@download/ENCFF846QOW.bam 24.5 M 0 19.4 M 0.793 SE 32 None 0.0 M 13.4 M 12.5 M 0.511 0.93 0.94 15.68 140 1.04 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/e52c43e0-a6b6-474f-9ad0-bab8e6930ea9/@@download/cross_correlation_plot/ENCFF000VHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB597OAS ENCFF000VHM Illumina Genome Analyzer 2016-07-13T02:52:00.815621+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z52803693JvxGJJZb0P15 ENCSR000EWS https://www.encodeproject.org/experiments/ENCSR000EWS transcription factor GATA3-human MCF-7 immortalized cell line peggy-farnham ENCODE2 pending SE "32,36" Illumina Genome Analyzer unreviewed ENCSR000EWV https://www.encodeproject.org/experiments/ENCSR000EWV transcription factor GATA3-human MCF-7 immortalized cell line peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer II unreviewed ENCSR000EWR https://www.encodeproject.org/experiments/ENCSR000EWR "histone,histone modification,narrow histone mark" H3K27ac-human MCF-7 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF224RMQ https://www.encodeproject.org/files/ENCFF224RMQ/@@download/ENCFF224RMQ.bam ENCFF049OLR https://www.encodeproject.org/files/ENCFF049OLR/@@download/ENCFF049OLR.bam 31.4 M 0 31.3 M 0.996 SE 32 None 0.0 M 23.3 M 22.5 M 0.717 0.96 0.97 31.25 200 1.06 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0711de0-fa8d-4460-8692-79190f47bf07/@@download/cross_correlation_plot/ENCFF000VHD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB688CAH ENCFF000VHD Illumina Genome Analyzer 2016-07-13T02:53:14.050926+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4kj03693Gpj8BkZvvgkQ ENCSR000EWR https://www.encodeproject.org/experiments/ENCSR000EWR "histone,histone modification,narrow histone mark" H3K27ac-human MCF-7 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF181AML https://www.encodeproject.org/files/ENCFF181AML/@@download/ENCFF181AML.bam ENCFF784DDV https://www.encodeproject.org/files/ENCFF784DDV/@@download/ENCFF784DDV.bam 28.8 M 0 28.7 M 0.997 SE 32 None 0.0 M 21.8 M 21.0 M 0.730 0.96 0.96 25.80 185 1.04 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d695511-9fe7-424f-ba97-09ed164b1fd5/@@download/cross_correlation_plot/ENCFF000VHC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB542NBD ENCFF000VHC Illumina Genome Analyzer 2016-07-13T02:52:42.308616+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4xQ03693JvxGJJZb0P0Q ENCSR000EWP https://www.encodeproject.org/experiments/ENCSR000EWP "histone,histone modification,broad histone mark" H3K27me3-human MCF-7 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF611UYK https://www.encodeproject.org/files/ENCFF611UYK/@@download/ENCFF611UYK.bam ENCFF290FYI https://www.encodeproject.org/files/ENCFF290FYI/@@download/ENCFF290FYI.bam 41.0 M 0 40.8 M 0.996 SE 36 36 native 0.0 M 32.7 M 31.9 M 0.778 0.97 0.98 42.45 185 1.02 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7facd9b-2863-484e-bed2-4149b6bcb569/@@download/cross_correlation_plot/ENCFF000VFU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB580THT ENCFF000VFU Illumina Genome Analyzer 2016-10-26T17:38:09.592182+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082X680369KPb3j15B4p90x ENCSR000EWP https://www.encodeproject.org/experiments/ENCSR000EWP "histone,histone modification,broad histone mark" H3K27me3-human MCF-7 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF997VYW https://www.encodeproject.org/files/ENCFF997VYW/@@download/ENCFF997VYW.bam ENCFF879QJA https://www.encodeproject.org/files/ENCFF879QJA/@@download/ENCFF879QJA.bam 38.7 M 0 38.4 M 0.993 SE 36 36 native 0.0 M 29.1 M 28.0 M 0.723 0.96 0.96 25.67 165 1.03 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/72928a33-5f8b-4493-b05c-234ec6918878/@@download/cross_correlation_plot/ENCFF000VFY-ENCFF000VFW_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB435KRO "ENCFF000VFW,ENCFF000VFY" Illumina Genome Analyzer 2016-10-26T17:37:29.032722+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082XGj03698F1qV3kBFq390 ENCSR000EWO https://www.encodeproject.org/experiments/ENCSR000EWO "histone,histone modification,broad histone mark" H3K36me3-human MCF-7 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF799VOW https://www.encodeproject.org/files/ENCFF799VOW/@@download/ENCFF799VOW.bam ENCFF586FPT https://www.encodeproject.org/files/ENCFF586FPT/@@download/ENCFF586FPT.bam 30.8 M 0 30.6 M 0.994 SE 36 36 native 0.0 M 23.8 M 22.8 M 0.740 0.96 0.96 24.39 0 1.03 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/163f5baf-fc5a-4f0c-9813-3f22c279ab3d/@@download/cross_correlation_plot/ENCFF000VGE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB021KYP ENCFF000VGE Illumina Genome Analyzer 2016-10-26T17:36:33.952258+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082V780369BgF5f15PFF2YZ ENCSR000EWO https://www.encodeproject.org/experiments/ENCSR000EWO "histone,histone modification,broad histone mark" H3K36me3-human MCF-7 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF455RXR https://www.encodeproject.org/files/ENCFF455RXR/@@download/ENCFF455RXR.bam ENCFF098EYP https://www.encodeproject.org/files/ENCFF098EYP/@@download/ENCFF098EYP.bam 36.1 M 0 35.8 M 0.993 SE 36 36 native 0.0 M 26.8 M 25.3 M 0.701 0.94 0.94 17.98 145 1.06 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/019e8599-7fba-4463-8e99-ab04d7c3f90a/@@download/cross_correlation_plot/ENCFF000VGI-ENCFF000VGG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB107MMV "ENCFF000VGG,ENCFF000VGI" Illumina Genome Analyzer 2016-10-26T17:35:50.951207+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082VF80369GK9p461P313KG ENCSR000EWQ https://www.encodeproject.org/experiments/ENCSR000EWQ "histone,histone modification,broad histone mark" H3K9me3-human MCF-7 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF311QEJ https://www.encodeproject.org/files/ENCFF311QEJ/@@download/ENCFF311QEJ.bam ENCFF758SLN https://www.encodeproject.org/files/ENCFF758SLN/@@download/ENCFF758SLN.bam 31.7 M 0 31.2 M 0.984 SE 36 36 native 0.0 M 19.0 M 18.2 M 0.575 0.96 0.96 26.16 175 1.02 0.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9e58fda-f1a9-4b95-8627-6d493e3b033b/@@download/cross_correlation_plot/ENCFF000VFE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB343TFO ENCFF000VFE Illumina Genome Analyzer 2016-10-26T17:39:20.455229+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Gz003698F1qV3kBFq340 ENCSR000EWQ https://www.encodeproject.org/experiments/ENCSR000EWQ "histone,histone modification,broad histone mark" H3K9me3-human MCF-7 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF177ZNK https://www.encodeproject.org/files/ENCFF177ZNK/@@download/ENCFF177ZNK.bam ENCFF590PNV https://www.encodeproject.org/files/ENCFF590PNV/@@download/ENCFF590PNV.bam 25.6 M 0 25.1 M 0.981 SE 36 36 native 0.0 M 15.6 M 14.6 M 0.572 0.94 0.94 17.21 150 1.07 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec6cab8a-c5cc-4059-b6a6-4102c8c774c4/@@download/cross_correlation_plot/ENCFF000VFJ-ENCFF000VFG_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB126CTT "ENCFF000VFJ,ENCFF000VFG" Illumina Genome Analyzer 2016-10-26T17:38:09.020526+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082J5003695YX1xgJBKFF7G ENCSR000EWX https://www.encodeproject.org/experiments/ENCSR000EWX "recombinant protein,transcription factor" HA-E2F1-human MCF-7 immortalized cell line peggy-farnham ENCODE2 pending SE 32 Illumina Genome Analyzer unreviewed ENCSR000EWT https://www.encodeproject.org/experiments/ENCSR000EWT transcription factor TCF7L2-human MCF-7 immortalized cell line peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer II unreviewed ENCSR000EWU https://www.encodeproject.org/experiments/ENCSR000EWU transcription factor ZNF217-human MCF-7 immortalized cell line peggy-farnham ENCODE2 pending SE 36 Illumina Genome Analyzer unreviewed ENCSR000EXS https://www.encodeproject.org/experiments/ENCSR000EXS control Control-human mononuclear cell primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF522CTK https://www.encodeproject.org/files/ENCFF522CTK/@@download/ENCFF522CTK.bam ENCFF676VDZ https://www.encodeproject.org/files/ENCFF676VDZ/@@download/ENCFF676VDZ.bam 89.8 M 0 54.1 M 0.602 SE 40 38 38 0.0 M 42.4 M 39.4 M 0.439 0.93 0.93 14.46 285 1.02 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd7720df-e81c-4464-8b54-fb14d85e2d9a/@@download/cross_correlation_plot/ENCFF000VKN-ENCFF000VKM_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB781RIQ "ENCFF000VKN,ENCFF000VKM" Illumina Genome Analyzer 2016-11-19T14:04:40.017881+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0gyQv003696Qg5pk8g2gbJJ ENCSR000EXS https://www.encodeproject.org/experiments/ENCSR000EXS control Control-human mononuclear cell primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF738UVB https://www.encodeproject.org/files/ENCFF738UVB/@@download/ENCFF738UVB.bam ENCFF676VDZ https://www.encodeproject.org/files/ENCFF676VDZ/@@download/ENCFF676VDZ.bam 89.8 M 0 53.6 M 0.597 SE 40 40 native 0.0 M 42.4 M 39.4 M 0.439 0.93 0.93 14.53 295 1.02 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/13a261f0-8cc7-4ce3-b5d4-7908957399c1/@@download/cross_correlation_plot/ENCFF000VKN-ENCFF000VKM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB781RIQ "ENCFF000VKN,ENCFF000VKM" Illumina Genome Analyzer 2016-08-09T16:03:24.229032+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZG800369G0925gv2xQP2f ENCSR000EXW https://www.encodeproject.org/experiments/ENCSR000EXW "histone,histone modification,broad histone mark" H3K27me3-human mononuclear cell primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF294WAV https://www.encodeproject.org/files/ENCFF294WAV/@@download/ENCFF294WAV.bam ENCFF211PPP https://www.encodeproject.org/files/ENCFF211PPP/@@download/ENCFF211PPP.bam 36.1 M 0 33.4 M 0.924 SE 38 38 native 0.0 M 26.4 M 25.1 M 0.696 0.95 0.95 21.36 215 1.02 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/3817fd0a-1dd8-44cb-8805-6bac43cdfec2/@@download/cross_correlation_plot/ENCFF000VKC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB635NWG ENCFF000VKC Illumina Genome Analyzer 2016-11-11T15:31:59.135872+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfg8j036984XkYP1yq4VQ0 ENCSR000EXW https://www.encodeproject.org/experiments/ENCSR000EXW "histone,histone modification,broad histone mark" H3K27me3-human mononuclear cell primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF193OFZ https://www.encodeproject.org/files/ENCFF193OFZ/@@download/ENCFF193OFZ.bam ENCFF501LVA https://www.encodeproject.org/files/ENCFF501LVA/@@download/ENCFF501LVA.bam 52.3 M 0 44.5 M 0.850 SE 38 38 native 0.0 M 34.9 M 31.8 M 0.609 0.91 0.91 11.01 200 1.02 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/1db20db5-e4bf-4ff3-9305-5e6e450bde8b/@@download/cross_correlation_plot/ENCFF000VKE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB721UTU ENCFF000VKE Illumina Genome Analyzer 2016-11-11T15:32:02.444150+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfgPQ0369986BVPGZ1JZ5p ENCSR000EXV https://www.encodeproject.org/experiments/ENCSR000EXV "histone,histone modification,broad histone mark" H3K4me1-human mononuclear cell primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF934WYK https://www.encodeproject.org/files/ENCFF934WYK/@@download/ENCFF934WYK.bam ENCFF137WTR https://www.encodeproject.org/files/ENCFF137WTR/@@download/ENCFF137WTR.bam 20.1 M 0 18.9 M 0.939 SE 40 40 native 0.0 M 15.0 M 14.0 M 0.693 0.93 0.93 14.29 240 1.16 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/8c496005-a0fd-4094-9e93-b6c2c08c94e9/@@download/cross_correlation_plot/ENCFF000VKS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB392THL ENCFF000VKS Illumina Genome Analyzer 2016-11-11T15:29:44.311169+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0XfkzQ03690VBK7Zv5vZG05 ENCSR000EXV https://www.encodeproject.org/experiments/ENCSR000EXV "histone,histone modification,broad histone mark" H3K4me1-human mononuclear cell primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF993NKB https://www.encodeproject.org/files/ENCFF993NKB/@@download/ENCFF993NKB.bam ENCFF759AWQ https://www.encodeproject.org/files/ENCFF759AWQ/@@download/ENCFF759AWQ.bam 48.0 M 0 41.9 M 0.872 SE 40 40 native 0.0 M 33.1 M 29.2 M 0.608 0.88 0.88 7.98 205 1.10 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b07f899-12f4-486a-b1c5-68dec1e08cbb/@@download/cross_correlation_plot/ENCFF000VKX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB311HRG ENCFF000VKX Illumina Genome Analyzer 2016-11-11T15:30:29.430122+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfp4j036945pqjGJ4QpPY7 ENCSR000EXT https://www.encodeproject.org/experiments/ENCSR000EXT "histone,histone modification,narrow histone mark" H3K4me3-human mononuclear cell primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF956IGG https://www.encodeproject.org/files/ENCFF956IGG/@@download/ENCFF956IGG.bam ENCFF952FYV https://www.encodeproject.org/files/ENCFF952FYV/@@download/ENCFF952FYV.bam 41.6 M 0 37.0 M 0.887 SE 38 38 None 0.0 M 29.0 M 21.7 M 0.521 0.75 0.74 3.72 230 1.91 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/867a7844-7df2-4873-b02c-8ebf0ba8e1bc/@@download/cross_correlation_plot/ENCFF000VKB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB400KGK ENCFF000VKB Illumina Genome Analyzer 2016-08-10T01:15:25.735865+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p84Q03697yXkpZbvqpJ2g ENCSR000EXT https://www.encodeproject.org/experiments/ENCSR000EXT "histone,histone modification,narrow histone mark" H3K4me3-human mononuclear cell primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF534YTL https://www.encodeproject.org/files/ENCFF534YTL/@@download/ENCFF534YTL.bam ENCFF328AYW https://www.encodeproject.org/files/ENCFF328AYW/@@download/ENCFF328AYW.bam 48.6 M 0 42.2 M 0.868 SE 38 38 None 0.0 M 33.5 M 26.5 M 0.545 0.79 0.78 4.32 195 1.26 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/299e6c92-ed8d-41ed-80f1-f2b9c735f2c3/@@download/cross_correlation_plot/ENCFF000VKA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB070UUQ ENCFF000VKA Illumina Genome Analyzer 2016-08-10T01:15:59.414947+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p87Q03695GVBx74k68gkV ENCSR000EXU https://www.encodeproject.org/experiments/ENCSR000EXU "histone,histone modification,broad histone mark" H3K9me3-human mononuclear cell primary cell 1 peggy-farnham ENCODE2 GRCh38 ENCFF481ACX https://www.encodeproject.org/files/ENCFF481ACX/@@download/ENCFF481ACX.bam ENCFF387BDI https://www.encodeproject.org/files/ENCFF387BDI/@@download/ENCFF387BDI.bam 61.7 M 0 44.9 M 0.728 SE 40 40 native 0.0 M 26.1 M 23.6 M 0.383 0.91 0.91 11.27 350 1.03 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/b2ad07c3-77a4-4a02-a33a-a5c408969af2/@@download/cross_correlation_plot/ENCFF000VLB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB905ETC ENCFF000VLB Illumina Genome Analyzer 2016-11-11T15:32:47.385155+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xffyj0369JKzYX9Gzz3B62 ENCSR000EXU https://www.encodeproject.org/experiments/ENCSR000EXU "histone,histone modification,broad histone mark" H3K9me3-human mononuclear cell primary cell 2 peggy-farnham ENCODE2 GRCh38 ENCFF027UIW https://www.encodeproject.org/files/ENCFF027UIW/@@download/ENCFF027UIW.bam ENCFF709XVP https://www.encodeproject.org/files/ENCFF709XVP/@@download/ENCFF709XVP.bam 117.1 M 0 52.0 M 0.444 SE 40 40 native 0.0 M 32.0 M 28.0 M 0.239 0.88 0.88 8.18 350 1.03 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/86a66a80-0a75-4b57-b1c0-babe22aca93b/@@download/cross_correlation_plot/ENCFF000VKI-ENCFF000VKH_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB791OPI "ENCFF000VKH,ENCFF000VKI" Illumina Genome Analyzer 2016-11-19T01:04:53.749105+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0Xfg3j0369986BVPGZ1JZ5X ENCSR000EXF https://www.encodeproject.org/experiments/ENCSR000EXF control Control-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF293DEQ https://www.encodeproject.org/files/ENCFF293DEQ/@@download/ENCFF293DEQ.bam ENCFF585ORN https://www.encodeproject.org/files/ENCFF585ORN/@@download/ENCFF585ORN.bam 84.1 M 0 66.6 M 0.792 SE 32 32 native 0.0 M 46.7 M 46.0 M 0.547 0.99 0.99 77.48 100 1.01 0.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/2b9b78b4-1bfb-45bb-befb-1c3044881139/@@download/cross_correlation_plot/ENCFF000VJV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB796XMC ENCFF000VJV Illumina Genome Analyzer 2016-10-26T16:14:39.984774+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07y56Q0369PQyG3V5B44P74 ENCSR000EXE https://www.encodeproject.org/experiments/ENCSR000EXE "histone,histone modification,broad histone mark" H3K27me3-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF985FXS https://www.encodeproject.org/files/ENCFF985FXS/@@download/ENCFF985FXS.bam ENCFF442ZHD https://www.encodeproject.org/files/ENCFF442ZHD/@@download/ENCFF442ZHD.bam 47.8 M 0 21.3 M 0.446 SE 32 32 native 0.0 M 15.1 M 14.9 M 0.311 0.98 0.98 65.59 120 1.03 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7a1c091-7c97-41fd-b998-4fd3c0e81960/@@download/cross_correlation_plot/ENCFF000VHU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB348QCJ ENCFF000VHU Illumina Genome Analyzer 2016-11-15T05:12:17.312628+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6vX00369JbJXk4G78JP2Y ENCSR000EXE https://www.encodeproject.org/experiments/ENCSR000EXE "histone,histone modification,broad histone mark" H3K27me3-human NT2/D1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF934OWF https://www.encodeproject.org/files/ENCFF934OWF/@@download/ENCFF934OWF.bam ENCFF945SWA https://www.encodeproject.org/files/ENCFF945SWA/@@download/ENCFF945SWA.bam 25.5 M 0 24.7 M 0.965 SE 32 32 native 0.0 M 18.5 M 16.5 M 0.646 0.89 0.89 9.22 165 1.13 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/aee81166-3758-4552-8249-65929c45d3bb/@@download/cross_correlation_plot/ENCFF000VHS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB309CQJ ENCFF000VHS Illumina Genome Analyzer 2016-11-15T05:11:06.611205+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6vjj036931286X9jZQ4vg ENCSR000EXB https://www.encodeproject.org/experiments/ENCSR000EXB "histone,histone modification,broad histone mark" H3K36me3-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF669HYW https://www.encodeproject.org/files/ENCFF669HYW/@@download/ENCFF669HYW.bam ENCFF657SGO https://www.encodeproject.org/files/ENCFF657SGO/@@download/ENCFF657SGO.bam 24.7 M 0 19.8 M 0.804 SE 36 36 native 0.0 M 15.3 M 13.3 M 0.537 0.87 0.86 7.16 170 1.05 0.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/16d4689f-13fa-4d21-88e0-7c0fdb88b49e/@@download/cross_correlation_plot/ENCFF000VHR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB718TAB ENCFF000VHR Illumina Genome Analyzer 2016-11-15T16:53:42.277860+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bB2G00369PBFF2z0Pk0k5V ENCSR000EXB https://www.encodeproject.org/experiments/ENCSR000EXB "histone,histone modification,broad histone mark" H3K36me3-human NT2/D1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF754BRI https://www.encodeproject.org/files/ENCFF754BRI/@@download/ENCFF754BRI.bam ENCFF890RDI https://www.encodeproject.org/files/ENCFF890RDI/@@download/ENCFF890RDI.bam 32.5 M 0 28.9 M 0.890 SE 32 32 native 0.0 M 20.8 M 19.8 M 0.610 0.95 0.95 22.09 140 1.11 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/183efe96-fefc-4399-85fa-f9055c49903b/@@download/cross_correlation_plot/ENCFF000VHV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB939RTF ENCFF000VHV Illumina Genome Analyzer 2016-11-15T16:54:03.839487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0bB2YQ0369BZ4kqbvjGq1Pv ENCSR000EXA https://www.encodeproject.org/experiments/ENCSR000EXA "histone,histone modification,broad histone mark" H3K4me1-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF921DJT https://www.encodeproject.org/files/ENCFF921DJT/@@download/ENCFF921DJT.bam ENCFF464DEX https://www.encodeproject.org/files/ENCFF464DEX/@@download/ENCFF464DEX.bam 21.4 M 0 18.9 M 0.883 SE 32 32 native 0.0 M 14.1 M 14.0 M 0.655 0.99 0.99 152.54 155 1.05 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/0782b9a9-f687-4a3e-a525-71e4c252c3f3/@@download/cross_correlation_plot/ENCFF000VIB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB184PLI ENCFF000VIB Illumina Genome Analyzer 2016-11-15T05:05:51.921233+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6v5j036956PvgkQ1KX5gJ ENCSR000EXA https://www.encodeproject.org/experiments/ENCSR000EXA "histone,histone modification,broad histone mark" H3K4me1-human NT2/D1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF425PUW https://www.encodeproject.org/files/ENCFF425PUW/@@download/ENCFF425PUW.bam ENCFF568IJM https://www.encodeproject.org/files/ENCFF568IJM/@@download/ENCFF568IJM.bam 23.0 M 0 20.3 M 0.882 SE 32 32 native 0.0 M 15.1 M 14.9 M 0.646 0.99 0.99 69.26 120 1.05 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/40065971-fec2-4090-a656-53f4987de802/@@download/cross_correlation_plot/ENCFF000VIF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB425PSF ENCFF000VIF Illumina Genome Analyzer 2016-11-15T05:05:46.681943+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6vG8036935XbqQ06p9f44 ENCSR000EXD https://www.encodeproject.org/experiments/ENCSR000EXD "histone,histone modification,narrow histone mark" H3K4me3-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF819CWE https://www.encodeproject.org/files/ENCFF819CWE/@@download/ENCFF819CWE.bam ENCFF801BBA https://www.encodeproject.org/files/ENCFF801BBA/@@download/ENCFF801BBA.bam 21.3 M 0 15.7 M 0.738 SE 32 32 None 0.0 M 11.6 M 11.4 M 0.533 0.98 0.98 44.38 140 1.37 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c726a4d-2a5b-4d62-b9d7-aa8e021a47a5/@@download/cross_correlation_plot/ENCFF000VIG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB571OCG ENCFF000VIG Illumina Genome Analyzer 2016-08-10T01:16:14.975245+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p4V80369585gqXkvzxFK4 ENCSR000EXD https://www.encodeproject.org/experiments/ENCSR000EXD "histone,histone modification,narrow histone mark" H3K4me3-human NT2/D1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF375NUY https://www.encodeproject.org/files/ENCFF375NUY/@@download/ENCFF375NUY.bam ENCFF310LIM https://www.encodeproject.org/files/ENCFF310LIM/@@download/ENCFF310LIM.bam 23.4 M 0 17.1 M 0.733 SE 32 32 None 0.0 M 12.9 M 12.3 M 0.527 0.96 0.96 24.87 170 1.47 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb11d788-10e9-4948-b7bc-ba31669979c2/@@download/cross_correlation_plot/ENCFF000VIE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB375ZQM ENCFF000VIE Illumina Genome Analyzer 2016-08-10T01:16:24.499648+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p4Y803691gzQyYkvVqVfq ENCSR000EXC https://www.encodeproject.org/experiments/ENCSR000EXC "histone,histone modification,narrow histone mark" H3K9ac-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF136WZI https://www.encodeproject.org/files/ENCFF136WZI/@@download/ENCFF136WZI.bam ENCFF595YII https://www.encodeproject.org/files/ENCFF595YII/@@download/ENCFF595YII.bam 17.9 M 0 15.3 M 0.856 SE 32 32 native 0.0 M 11.7 M 11.5 M 0.644 0.99 0.99 69.37 120 1.11 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca97ee41-997f-48ec-a752-de07ac933752/@@download/cross_correlation_plot/ENCFF000VIK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB863BXE ENCFF000VIK Illumina Genome Analyzer 2016-11-15T05:11:02.461301+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6qf003690GY00B90p7F74 ENCSR000EXC https://www.encodeproject.org/experiments/ENCSR000EXC "histone,histone modification,narrow histone mark" H3K9ac-human NT2/D1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF551UCJ https://www.encodeproject.org/files/ENCFF551UCJ/@@download/ENCFF551UCJ.bam ENCFF854WUE https://www.encodeproject.org/files/ENCFF854WUE/@@download/ENCFF854WUE.bam 18.9 M 0 16.2 M 0.853 SE 32 32 native 0.0 M 12.5 M 12.1 M 0.639 0.97 0.97 34.65 145 1.19 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/01e1c290-16bc-40f2-9351-c35ea1eacb5f/@@download/cross_correlation_plot/ENCFF000VIL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB818CBG ENCFF000VIL Illumina Genome Analyzer 2016-11-15T05:10:58.867328+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6qvQ036956PvgkQ1KX5g4 ENCSR000EWZ https://www.encodeproject.org/experiments/ENCSR000EWZ "histone,histone modification,broad histone mark" H3K9me3-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF542UEQ https://www.encodeproject.org/files/ENCFF542UEQ/@@download/ENCFF542UEQ.bam ENCFF947TSO https://www.encodeproject.org/files/ENCFF947TSO/@@download/ENCFF947TSO.bam 32.2 M 0 31.0 M 0.961 SE 36 36 native 0.0 M 19.5 M 15.8 M 0.491 0.81 0.81 5.11 335 1.03 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ec16821-d0f9-47a2-8c1b-74f4ddb0578b/@@download/cross_correlation_plot/ENCFF000VGV-ENCFF000VGT_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB543MWZ "ENCFF000VGT,ENCFF000VGV" Illumina Genome Analyzer 2016-10-26T17:36:17.740835+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Qyj03692404175P5Q70F ENCSR000EWZ https://www.encodeproject.org/experiments/ENCSR000EWZ "histone,histone modification,broad histone mark" H3K9me3-human NT2/D1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF101VWL https://www.encodeproject.org/files/ENCFF101VWL/@@download/ENCFF101VWL.bam ENCFF861CVL https://www.encodeproject.org/files/ENCFF861CVL/@@download/ENCFF861CVL.bam 61.2 M 0 48.0 M 0.784 SE 36 36 native 0.0 M 26.9 M 25.5 M 0.417 0.95 0.95 21.02 125 1.05 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bead0de-d6ee-45af-a12d-b15a002bf9c9/@@download/cross_correlation_plot/ENCFF000VGZ-ENCFF000VGX_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB671JCK "ENCFF000VGZ,ENCFF000VGX" Illumina Genome Analyzer 2016-10-26T17:37:28.092649+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082V2j0369J2Pxk91P1yF8V ENCSR000EXH https://www.encodeproject.org/experiments/ENCSR000EXH "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF272YVM https://www.encodeproject.org/files/ENCFF272YVM/@@download/ENCFF272YVM.bam ENCFF721QTD https://www.encodeproject.org/files/ENCFF721QTD/@@download/ENCFF721QTD.bam 20.0 M 0 12.0 M 0.602 SE 32 32 native 0.0 M 7.6 M 7.5 M 0.377 0.99 0.99 163.81 60 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/18eed4b7-7cb7-4397-902d-c2f65610c334/@@download/cross_correlation_plot/ENCFF000ZNJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB937UCA ENCFF000ZNJ Illumina Genome Analyzer 2016-11-15T05:12:31.808172+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6gF80369PyvFZjj61GP67 ENCSR000EXH https://www.encodeproject.org/experiments/ENCSR000EXH "transcription factor,chromatin remodeller,RNA binding protein" SUZ12-human NT2/D1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF114QPX https://www.encodeproject.org/files/ENCFF114QPX/@@download/ENCFF114QPX.bam ENCFF248WSS https://www.encodeproject.org/files/ENCFF248WSS/@@download/ENCFF248WSS.bam 19.3 M 0 6.4 M 0.332 SE 32 32 native 0.0 M 4.3 M 4.2 M 0.219 0.98 0.98 66.17 75 1.07 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/ddfb2305-ddf3-4386-bd9f-c8becbfd7fd8/@@download/cross_correlation_plot/ENCFF000ZNK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB265SEX ENCFF000ZNK Illumina Genome Analyzer 2016-11-15T05:12:16.694824+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6gQQ03690VBK7Zv5vZvgZ ENCSR000EXG https://www.encodeproject.org/experiments/ENCSR000EXG transcription factor YY1-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF004FTO https://www.encodeproject.org/files/ENCFF004FTO/@@download/ENCFF004FTO.bam ENCFF899JJR https://www.encodeproject.org/files/ENCFF899JJR/@@download/ENCFF899JJR.bam 22.2 M 0 13.1 M 0.589 SE 32 32 native 0.0 M 8.0 M 8.0 M 0.358 0.99 0.99 141.37 90 1.13 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf31e4a6-f103-4ad8-8065-7018873d58cc/@@download/cross_correlation_plot/ENCFF000ZNL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB405KMX ENCFF000ZNL Illumina Genome Analyzer 2016-11-15T05:12:21.287787+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6gp00369FZF23QQ0jZv8x ENCSR000EXG https://www.encodeproject.org/experiments/ENCSR000EXG transcription factor YY1-human NT2/D1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF115RLN https://www.encodeproject.org/files/ENCFF115RLN/@@download/ENCFF115RLN.bam ENCFF005JOP https://www.encodeproject.org/files/ENCFF005JOP/@@download/ENCFF005JOP.bam 23.4 M 0 8.8 M 0.376 SE 32 32 native 0.0 M 5.8 M 5.6 M 0.241 0.98 0.98 66.05 95 1.82 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab1f7a5a-10b7-444b-b4e2-d76a47918538/@@download/cross_correlation_plot/ENCFF000ZOF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB297SAB ENCFF000ZOF Illumina Genome Analyzer 2016-11-15T05:11:52.476496+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6j0j036935XbqQ06p9f1J ENCSR000EWY https://www.encodeproject.org/experiments/ENCSR000EWY transcription factor ZNF274-human NT2/D1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF218VQI https://www.encodeproject.org/files/ENCFF218VQI/@@download/ENCFF218VQI.bam ENCFF884VDX https://www.encodeproject.org/files/ENCFF884VDX/@@download/ENCFF884VDX.bam 32.2 M 0 25.5 M 0.792 SE 36 36 native 0.0 M 18.1 M 15.9 M 0.494 0.88 0.88 8.17 185 1.04 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0a659b4-981f-4b8d-bbdf-de11745e2c1d/@@download/cross_correlation_plot/ENCFF000ZOH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB089TZK ENCFF000ZOH Illumina Genome Analyzer 2016-11-15T05:13:05.183538+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6fy00369PyvFZjj61GP5x ENCSR000EWY https://www.encodeproject.org/experiments/ENCSR000EWY transcription factor ZNF274-human NT2/D1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF267AMC https://www.encodeproject.org/files/ENCFF267AMC/@@download/ENCFF267AMC.bam ENCFF797JLC https://www.encodeproject.org/files/ENCFF797JLC/@@download/ENCFF797JLC.bam 62.6 M 0 36.7 M 0.586 SE 36 36 native 0.0 M 25.0 M 23.2 M 0.371 0.93 0.93 15.60 205 1.02 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/04a43811-43b2-4620-8e3f-c8f13af2ff40/@@download/cross_correlation_plot/ENCFF000ZOI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB337QMQ ENCFF000ZOI Illumina Genome Analyzer 2016-11-15T05:13:49.444346+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b6g2803699PK8zfkzkFxvJ ENCSR000EXM https://www.encodeproject.org/experiments/ENCSR000EXM control Control-human Panc1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF675MQQ https://www.encodeproject.org/files/ENCFF675MQQ/@@download/ENCFF675MQQ.bam ENCFF025ODI https://www.encodeproject.org/files/ENCFF025ODI/@@download/ENCFF025ODI.bam 41.7 M 0 40.9 M 0.980 SE 36 36 None 0.0 M 24.9 M 24.2 M 0.582 0.98 0.98 43.80 450 1.01 0.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/514f6a9b-7b5a-434f-adf6-6611e824caac/@@download/cross_correlation_plot/ENCFF000VJK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB499BUK ENCFF000VJK Illumina Genome Analyzer 2016-07-13T02:53:48.656271+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4X8036919PjY2VyxY7zY ENCSR000EXK https://www.encodeproject.org/experiments/ENCSR000EXK "histone,histone modification,narrow histone mark" H3K27ac-human Panc1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF960KET https://www.encodeproject.org/files/ENCFF960KET/@@download/ENCFF960KET.bam ENCFF911FBA https://www.encodeproject.org/files/ENCFF911FBA/@@download/ENCFF911FBA.bam 36.9 M 0 36.6 M 0.992 SE 36 None 0.0 M 29.6 M 28.5 M 0.774 0.96 0.97 30.45 180 1.07 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/2fa41687-df7a-4177-81bb-a37a9eb3de62/@@download/cross_correlation_plot/ENCFF000VJD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB737KTI ENCFF000VJD Illumina Genome Analyzer II 2016-07-13T02:54:05.110960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4B003691y3B9QkZQBY9F ENCSR000EXK https://www.encodeproject.org/experiments/ENCSR000EXK "histone,histone modification,narrow histone mark" H3K27ac-human Panc1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF384KMQ https://www.encodeproject.org/files/ENCFF384KMQ/@@download/ENCFF384KMQ.bam ENCFF369ZQD https://www.encodeproject.org/files/ENCFF369ZQD/@@download/ENCFF369ZQD.bam 27.9 M 0 27.7 M 0.991 SE 36 None 0.0 M 21.8 M 19.2 M 0.687 0.88 0.88 8.17 245 1.13 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/61309cb5-841b-4c49-988d-9b3dc71e6364/@@download/cross_correlation_plot/ENCFF000VJH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB797ODR ENCFF000VJH Illumina Genome Analyzer II 2016-07-13T02:53:04.601912+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z4Gj03698Y7BxyxyPp35j ENCSR000FCO https://www.encodeproject.org/experiments/ENCSR000FCO "histone,histone modification,broad histone mark" H3K27me3-human Panc1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF683OAH https://www.encodeproject.org/files/ENCFF683OAH/@@download/ENCFF683OAH.bam ENCFF076WEO https://www.encodeproject.org/files/ENCFF076WEO/@@download/ENCFF076WEO.bam 29.2 M 0 28.9 M 0.987 SE 36 36 native 0.0 M 22.7 M 22.4 M 0.767 0.99 0.99 107.36 195 1.02 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b97f31b-02c0-429e-bfa6-548fa4a87acb/@@download/cross_correlation_plot/ENCFF002AAI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABQ "peggy-farnham:USC227_H3K27me3_PANC1_Rep1,peggy-farnham:USC227" ENCFF002AAI Illumina Genome Analyzer IIx 2016-10-26T17:42:52.384368+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0825v80369BqVfYq19ZB8yB ENCSR000FCO https://www.encodeproject.org/experiments/ENCSR000FCO "histone,histone modification,broad histone mark" H3K27me3-human Panc1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF714IMC https://www.encodeproject.org/files/ENCFF714IMC/@@download/ENCFF714IMC.bam ENCFF150QRA https://www.encodeproject.org/files/ENCFF150QRA/@@download/ENCFF150QRA.bam 34.2 M 0 33.6 M 0.983 SE 36 36 native 0.0 M 26.4 M 25.4 M 0.742 0.96 0.96 28.61 160 1.01 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/54cd3736-3a91-4f5d-8172-7f33a19a02f9/@@download/cross_correlation_plot/ENCFF002AAJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABR "peggy-farnham:USC341*,peggy-farnham:USC341*_H3K27me3_PANC1_Rep2" ENCFF002AAJ Illumina Genome Analyzer IIx 2016-10-26T17:43:25.576666+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08261Q036923pJJqk9xzYk2 ENCSR000FCM https://www.encodeproject.org/experiments/ENCSR000FCM "histone,histone modification,broad histone mark" H3K36me3-human Panc1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF455VTP https://www.encodeproject.org/files/ENCFF455VTP/@@download/ENCFF455VTP.bam ENCFF962VFC https://www.encodeproject.org/files/ENCFF962VFC/@@download/ENCFF962VFC.bam 24.6 M 0 22.8 M 0.929 SE 36 36 native 0.0 M 18.1 M 15.0 M 0.611 0.85 0.86 7.44 115 1.03 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fa35637-4324-4021-bd26-edfbb533c309/@@download/cross_correlation_plot/ENCFF002AAE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABM "peggy-farnham:USC342*,peggy-farnham:USC342*_H3K36me3_PANC1_Rep1" ENCFF002AAE Illumina Genome Analyzer IIx 2016-10-26T17:36:02.049540+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082PB803699VK2qfkF2Yj45 ENCSR000FCM https://www.encodeproject.org/experiments/ENCSR000FCM "histone,histone modification,broad histone mark" H3K36me3-human Panc1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF114KPN https://www.encodeproject.org/files/ENCFF114KPN/@@download/ENCFF114KPN.bam ENCFF630TLB https://www.encodeproject.org/files/ENCFF630TLB/@@download/ENCFF630TLB.bam 27.1 M 0 26.4 M 0.971 SE 36 36 native 0.0 M 20.5 M 16.2 M 0.599 0.80 0.81 5.20 125 1.02 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7dd1cd9-a96c-4477-868b-8923b230dddb/@@download/cross_correlation_plot/ENCFF002AAF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABN "peggy-farnham:USC344*,peggy-farnham:USC344*_H3K36me3_PANC1_Rep2" ENCFF002AAF Illumina Genome Analyzer IIx 2016-10-26T17:36:05.380531+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082PQ803691PG1GVbF47J6X ENCSR000EXJ https://www.encodeproject.org/experiments/ENCSR000EXJ "histone,histone modification,broad histone mark" H3K4me1-human Panc1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF453WFX https://www.encodeproject.org/files/ENCFF453WFX/@@download/ENCFF453WFX.bam ENCFF032FNP https://www.encodeproject.org/files/ENCFF032FNP/@@download/ENCFF032FNP.bam 30.5 M 0 27.4 M 0.898 SE 36 36 native 0.0 M 22.1 M 17.1 M 0.562 0.78 0.77 4.01 190 1.08 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/660dfdf5-4e5a-4bbe-be7b-36f39b9b93fe/@@download/cross_correlation_plot/ENCFF000VIP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB482XLE ENCFF000VIP Illumina Genome Analyzer II 2016-10-26T17:58:56.229025+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0822G003697KPkyX9BPPpxX ENCSR000EXJ https://www.encodeproject.org/experiments/ENCSR000EXJ "histone,histone modification,broad histone mark" H3K4me1-human Panc1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF527FXQ https://www.encodeproject.org/files/ENCFF527FXQ/@@download/ENCFF527FXQ.bam ENCFF852BZE https://www.encodeproject.org/files/ENCFF852BZE/@@download/ENCFF852BZE.bam 26.9 M 0 26.5 M 0.985 SE 36 36 native 0.0 M 20.3 M 17.0 M 0.630 0.84 0.83 5.62 220 1.06 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd7258d4-ebe1-4e61-ae52-eba8a7ca344f/@@download/cross_correlation_plot/ENCFF000VIR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB346ZDV ENCFF000VIR Illumina Genome Analyzer II 2016-10-26T17:58:57.420379+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0822VQ0369BX1xqb1B80894 ENCSR000EXI https://www.encodeproject.org/experiments/ENCSR000EXI "histone,histone modification,narrow histone mark" H3K4me3-human Panc1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF738NZN https://www.encodeproject.org/files/ENCFF738NZN/@@download/ENCFF738NZN.bam ENCFF556ETU https://www.encodeproject.org/files/ENCFF556ETU/@@download/ENCFF556ETU.bam 32.2 M 0 31.3 M 0.974 SE 36 36 None 0.0 M 27.3 M 19.8 M 0.616 0.73 0.76 4.88 220 2.11 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a3b95eb-2d1b-4075-b600-b4aba4d91229/@@download/cross_correlation_plot/ENCFF000VIV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB792WMR ENCFF000VIV Illumina Genome Analyzer II 2016-08-10T01:15:16.231157+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6ZQ0369PxgkxQJvqfQzB ENCSR000EXI https://www.encodeproject.org/experiments/ENCSR000EXI "histone,histone modification,narrow histone mark" H3K4me3-human Panc1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF848CLP https://www.encodeproject.org/files/ENCFF848CLP/@@download/ENCFF848CLP.bam ENCFF284UHE https://www.encodeproject.org/files/ENCFF284UHE/@@download/ENCFF284UHE.bam 21.4 M 0 21.0 M 0.981 SE 36 36 None 0.0 M 18.5 M 14.3 M 0.669 0.78 0.79 5.08 210 2.41 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/61e0234a-4496-4ae3-842b-7f736d9b750d/@@download/cross_correlation_plot/ENCFF000VIX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB135CDR ENCFF000VIX Illumina Genome Analyzer II 2016-08-10T01:14:56.005689+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By7p6fj03695b8XJVxvzFzbq ENCSR000FCN https://www.encodeproject.org/experiments/ENCSR000FCN "histone,histone modification,broad histone mark" H3K9me3-human Panc1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF475DOP https://www.encodeproject.org/files/ENCFF475DOP/@@download/ENCFF475DOP.bam ENCFF988MTM https://www.encodeproject.org/files/ENCFF988MTM/@@download/ENCFF988MTM.bam 40.2 M 0 39.8 M 0.989 SE 36 36 native 0.0 M 26.8 M 26.3 M 0.653 0.98 0.98 58.23 170 1.01 0.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/3afed7a2-b82f-44cb-979e-95efde2d4de9/@@download/cross_correlation_plot/ENCFF002AAG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABO "peggy-farnham:USC226,peggy-farnham:USC226_H3K9me3_PANC1_Rep1" ENCFF002AAG Illumina Genome Analyzer IIx 2016-10-26T17:37:31.610553+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0828p80369BqVfYq19ZB90Y ENCSR000FCN https://www.encodeproject.org/experiments/ENCSR000FCN "histone,histone modification,broad histone mark" H3K9me3-human Panc1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF202FHH https://www.encodeproject.org/files/ENCFF202FHH/@@download/ENCFF202FHH.bam ENCFF615GEW https://www.encodeproject.org/files/ENCFF615GEW/@@download/ENCFF615GEW.bam 30.8 M 0 30.0 M 0.973 SE 36 36 native 0.0 M 20.8 M 16.1 M 0.521 0.78 0.79 5.25 235 1.01 0.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/afa0127b-4999-498e-8b31-198968868fac/@@download/cross_correlation_plot/ENCFF002AAH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ABP "peggy-farnham:USC354*_H3K9me3_PANC1_Rep2,peggy-farnham:USC354*" ENCFF002AAH Illumina Genome Analyzer IIx 2016-10-26T17:43:51.670284+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082908036923pJJqk9xzYq4 ENCSR000EXL https://www.encodeproject.org/experiments/ENCSR000EXL transcription factor TCF7L2-human Panc1 immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF613CHF https://www.encodeproject.org/files/ENCFF613CHF/@@download/ENCFF613CHF.bam ENCFF471CXF https://www.encodeproject.org/files/ENCFF471CXF/@@download/ENCFF471CXF.bam 17.3 M 0 16.1 M 0.935 SE 36 36 native 0.0 M 12.3 M 11.1 M 0.645 0.90 0.91 11.13 220 1.13 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/08c255cb-677e-4129-a3fb-b454df0025d0/@@download/cross_correlation_plot/ENCFF000ZNX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB828OGC ENCFF000ZNX Illumina Genome Analyzer II 2016-12-10T22:45:49.577524+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163XjQ0369445BJJ915X9gb ENCSR000EXL https://www.encodeproject.org/experiments/ENCSR000EXL transcription factor TCF7L2-human Panc1 immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF786INL https://www.encodeproject.org/files/ENCFF786INL/@@download/ENCFF786INL.bam ENCFF040QSS https://www.encodeproject.org/files/ENCFF040QSS/@@download/ENCFF040QSS.bam 24.2 M 0 22.7 M 0.939 SE 36 36 native 0.0 M 17.2 M 15.4 M 0.637 0.90 0.90 9.97 190 1.15 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8a001c2-43c2-41e6-8cb9-aded91a1fb54/@@download/cross_correlation_plot/ENCFF000ZNZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB718WRS ENCFF000ZNZ Illumina Genome Analyzer II 2016-12-11T00:05:20.218948+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163XxQ03699Z3Y8493qbpxG ENCSR000EXY https://www.encodeproject.org/experiments/ENCSR000EXY control Control-human Raji immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF275RMZ https://www.encodeproject.org/files/ENCFF275RMZ/@@download/ENCFF275RMZ.bam ENCFF971KPK https://www.encodeproject.org/files/ENCFF971KPK/@@download/ENCFF971KPK.bam 29.7 M 0 19.6 M 0.659 SE 36 36 native 0.0 M 13.5 M 13.2 M 0.444 0.99 0.99 71.72 115 1.05 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e907ff9-2e1a-45ba-a382-58163140bfaa/@@download/cross_correlation_plot/ENCFF000ZPM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB285EBD ENCFF000ZPM Illumina Genome Analyzer 2016-10-26T17:39:25.095809+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082BFQ0369BqVfYq19ZB91b ENCSR000EXX https://www.encodeproject.org/experiments/ENCSR000EXX transcription factor POLR2A-human Raji immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF114YIF https://www.encodeproject.org/files/ENCFF114YIF/@@download/ENCFF114YIF.bam ENCFF532UUV https://www.encodeproject.org/files/ENCFF532UUV/@@download/ENCFF532UUV.bam 21.9 M 0 7.6 M 0.345 SE 36 36 native 0.0 M 5.8 M 5.2 M 0.235 0.89 0.91 12.54 115 4.75 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/5af059ec-eaa1-4266-9f8d-9e823bab0ae5/@@download/cross_correlation_plot/ENCFF000ZPU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB293ETL ENCFF000ZPU Illumina Genome Analyzer 2016-12-10T20:39:19.935168+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163378036933PVVJ7Qq01B4 ENCSR000EXX https://www.encodeproject.org/experiments/ENCSR000EXX transcription factor POLR2A-human Raji immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF522JCJ https://www.encodeproject.org/files/ENCFF522JCJ/@@download/ENCFF522JCJ.bam ENCFF111YIH https://www.encodeproject.org/files/ENCFF111YIH/@@download/ENCFF111YIH.bam 28.6 M 0 15.4 M 0.540 SE 36 36 native 0.0 M 11.2 M 9.7 M 0.340 0.87 0.90 13.29 110 3.18 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ccf3526-4acd-4526-bb53-f0fcf2f625a3/@@download/cross_correlation_plot/ENCFF000ZQE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB310VAF ENCFF000ZQE Illumina Genome Analyzer 2016-12-10T20:55:22.043092+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1633GQ03692pJ09J76g5fqj ENCSR000EYA https://www.encodeproject.org/experiments/ENCSR000EYA control Control-human SH-SY5Y immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF530TVV https://www.encodeproject.org/files/ENCFF530TVV/@@download/ENCFF530TVV.bam ENCFF163MVW https://www.encodeproject.org/files/ENCFF163MVW/@@download/ENCFF163MVW.bam 51.5 M 0 43.7 M 0.848 SE 36 36 native 0.0 M 32.3 M 31.2 M 0.607 0.97 0.97 33.52 200 1.03 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/8dcfcc12-ee05-402c-9e93-a5d74a4339c8/@@download/cross_correlation_plot/ENCFF000ZSI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB056TLV ENCFF000ZSI Illumina Genome Analyzer 2016-10-26T17:37:14.764388+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Kvj03699pQzk2JB6K7zB ENCSR000EYB https://www.encodeproject.org/experiments/ENCSR000EYB transcription factor GATA2-human SH-SY5Y immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF330EUW https://www.encodeproject.org/files/ENCFF330EUW/@@download/ENCFF330EUW.bam ENCFF823FPK https://www.encodeproject.org/files/ENCFF823FPK/@@download/ENCFF823FPK.bam 50.8 M 0 37.2 M 0.733 SE 36 36 native 0.0 M 21.5 M 19.4 M 0.381 0.90 0.91 10.76 190 1.41 2.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/69cc6c11-b2e8-4e19-a3ef-08438edad571/@@download/cross_correlation_plot/ENCFF000ZQX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB725MAG ENCFF000ZQX Illumina Genome Analyzer 2016-12-11T00:29:30.961668+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163GQ003693J2XX63yZ7By8 ENCSR000EYB https://www.encodeproject.org/experiments/ENCSR000EYB transcription factor GATA2-human SH-SY5Y immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF658RFI https://www.encodeproject.org/files/ENCFF658RFI/@@download/ENCFF658RFI.bam ENCFF354VOK https://www.encodeproject.org/files/ENCFF354VOK/@@download/ENCFF354VOK.bam 30.6 M 0 26.5 M 0.865 SE 36 36 native 0.0 M 19.9 M 17.2 M 0.563 0.87 0.87 7.36 200 1.32 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ef43ad5-0cec-4c91-af02-b8b4d2ed7788/@@download/cross_correlation_plot/ENCFF000ZQF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB399DXY ENCFF000ZQF Illumina Genome Analyzer 2016-12-10T22:47:03.613616+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Gb80369GF0YB1zjPf6Qv ENCSR000EXZ https://www.encodeproject.org/experiments/ENCSR000EXZ transcription factor GATA3-human SH-SY5Y immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF318YMR https://www.encodeproject.org/files/ENCFF318YMR/@@download/ENCFF318YMR.bam ENCFF757VQN https://www.encodeproject.org/files/ENCFF757VQN/@@download/ENCFF757VQN.bam 39.0 M 0 38.4 M 0.984 SE 36 36 native 0.0 M 30.7 M 23.2 M 0.595 0.76 0.74 3.62 220 1.07 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/666a3870-4472-4013-a7ff-080adcb68b53/@@download/cross_correlation_plot/ENCFF000ZPW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB629CTF ENCFF000ZPW Illumina Genome Analyzer 2016-12-11T03:57:12.309080+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164j3Q03697yz601ypVJ3KZ ENCSR000EXZ https://www.encodeproject.org/experiments/ENCSR000EXZ transcription factor GATA3-human SH-SY5Y immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF545GLE https://www.encodeproject.org/files/ENCFF545GLE/@@download/ENCFF545GLE.bam ENCFF248TCM https://www.encodeproject.org/files/ENCFF248TCM/@@download/ENCFF248TCM.bam 29.6 M 0 29.0 M 0.982 SE 36 36 native 0.0 M 22.6 M 16.7 M 0.566 0.74 0.72 3.30 215 1.13 3.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/66cee96d-2cb4-4b53-856a-a5315ab59d54/@@download/cross_correlation_plot/ENCFF000ZPZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB899FYR ENCFF000ZPZ Illumina Genome Analyzer 2016-12-11T03:49:37.825020+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164j880369BJyPz9fb9qY3x ENCSR000FDA https://www.encodeproject.org/experiments/ENCSR000FDA control Control-human SK-N-SH immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF449CRS https://www.encodeproject.org/files/ENCFF449CRS/@@download/ENCFF449CRS.bam ENCFF070HBM https://www.encodeproject.org/files/ENCFF070HBM/@@download/ENCFF070HBM.bam 62.8 M 0 61.0 M 0.972 SE 36 36 None 0.0 M 27.1 M 26.1 M 0.416 0.97 0.97 39.81 390 1.05 0.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/4135c996-fbe0-4335-ab73-42b892dff1f7/@@download/cross_correlation_plot/ENCFF002ABO-ENCFF002ABM_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB275IFZ "peggy-farnham:USC448,peggy-farnham:USC448_INPUT_SKNSH_rcvd_7-10-13" "ENCFF002ABO,ENCFF002ABM" Illumina Genome Analyzer IIx 2016-07-13T02:46:39.242268+00:00 released release ready https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/By2Z7Zj0369P69fF90Yfqjz4 ENCSR000FCU https://www.encodeproject.org/experiments/ENCSR000FCU "histone,histone modification,narrow histone mark" H3K27ac-human SK-N-SH immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF879LRT https://www.encodeproject.org/files/ENCFF879LRT/@@download/ENCFF879LRT.bam ENCFF822WJQ https://www.encodeproject.org/files/ENCFF822WJQ/@@download/ENCFF822WJQ.bam 38.5 M 0 38.3 M 0.995 SE 36 36 native 0.0 M 32.5 M 30.2 M 0.786 0.93 0.94 15.96 155 1.23 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/a98c051d-28d8-4189-a99b-2108366c785a/@@download/cross_correlation_plot/ENCFF002ABL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACQ "peggy-farnham:USC415_H3K27Ac_SKNSH_Rep1,peggy-farnham:USC415" ENCFF002ABL Illumina Genome Analyzer IIx 2016-08-17T13:03:21.233382+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bykx2Z803696724QGxpGF5X4 ENCSR000FCU https://www.encodeproject.org/experiments/ENCSR000FCU "histone,histone modification,narrow histone mark" H3K27ac-human SK-N-SH immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF659HWC https://www.encodeproject.org/files/ENCFF659HWC/@@download/ENCFF659HWC.bam ENCFF823PIJ https://www.encodeproject.org/files/ENCFF823PIJ/@@download/ENCFF823PIJ.bam 25.9 M 0 20.6 M 0.795 SE 50 36 36 0.0 M 17.1 M 16.2 M 0.628 0.95 0.95 20.85 125 1.26 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/3527588f-5d39-4993-84e4-8582eb7c3780/@@download/cross_correlation_plot/ENCFF002ABN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACR "peggy-farnham:USC481,peggy-farnham:USC481_H3K27Ac_SKNSH_Rep2" ENCFF002ABN HiSeq 2000 2016-08-13T01:49:42.405854+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Byg6PGQ036917V4KxZxXGBFx ENCSR000FCV https://www.encodeproject.org/experiments/ENCSR000FCV "histone,histone modification,broad histone mark" H3K36me3-human SK-N-SH immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF286BYV https://www.encodeproject.org/files/ENCFF286BYV/@@download/ENCFF286BYV.bam ENCFF004SDG https://www.encodeproject.org/files/ENCFF004SDG/@@download/ENCFF004SDG.bam 26.4 M 0 26.2 M 0.991 SE 36 36 native 0.0 M 20.2 M 18.1 M 0.687 0.90 0.89 9.40 0 1.05 0.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b378ff2-2a72-4968-a202-97d1d5d4927e/@@download/cross_correlation_plot/ENCFF002ABP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACS "peggy-farnham:USC163,peggy-farnham:USC163_H3K36me3_SKNSH_Rep1" ENCFF002ABP Illumina Genome Analyzer IIx 2016-10-26T17:42:48.693583+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08295j0369F7fQjy59kFgzF ENCSR000FCV https://www.encodeproject.org/experiments/ENCSR000FCV "histone,histone modification,broad histone mark" H3K36me3-human SK-N-SH immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF018CIN https://www.encodeproject.org/files/ENCFF018CIN/@@download/ENCFF018CIN.bam ENCFF240JFM https://www.encodeproject.org/files/ENCFF240JFM/@@download/ENCFF240JFM.bam 40.0 M 0 39.8 M 0.994 SE 36 36 native 0.0 M 30.9 M 30.2 M 0.754 0.98 0.98 43.28 165 1.02 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f2e770b-bf35-4d77-82ca-3521f388e6b1/@@download/cross_correlation_plot/ENCFF002ABQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACT "peggy-farnham:USC418,peggy-farnham:USC418_H3K36me3_SKNSH_Rep2" ENCFF002ABQ Illumina Genome Analyzer IIx 2016-10-26T17:43:53.280525+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829B00369KxbFbzV9pvvfk ENCSR000FCR https://www.encodeproject.org/experiments/ENCSR000FCR "histone,histone modification,broad histone mark" H3K4me1-human SK-N-SH immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF012CJU https://www.encodeproject.org/files/ENCFF012CJU/@@download/ENCFF012CJU.bam ENCFF886JIQ https://www.encodeproject.org/files/ENCFF886JIQ/@@download/ENCFF886JIQ.bam 40.9 M 0 40.6 M 0.993 SE 36 36 native 0.0 M 33.0 M 30.6 M 0.750 0.93 0.93 15.39 135 1.33 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0df0d9e-1bcd-4e60-94f7-1195b638cb20/@@download/cross_correlation_plot/ENCFF002ABG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACK "peggy-farnham:USC314,peggy-farnham:USC314_H3K4me1_SKNSH_Rep1" ENCFF002ABG Illumina Genome Analyzer IIx 2016-10-26T17:36:44.417519+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Vpj03695YX1xgJBKFF9G ENCSR000FCR https://www.encodeproject.org/experiments/ENCSR000FCR "histone,histone modification,broad histone mark" H3K4me1-human SK-N-SH immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF008NLI https://www.encodeproject.org/files/ENCFF008NLI/@@download/ENCFF008NLI.bam ENCFF002GIZ https://www.encodeproject.org/files/ENCFF002GIZ/@@download/ENCFF002GIZ.bam 40.8 M 0 40.6 M 0.994 SE 36 36 native 0.0 M 33.2 M 32.6 M 0.798 0.98 0.98 53.74 180 1.03 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/feda41da-1010-4a71-b980-296538f55fdf/@@download/cross_correlation_plot/ENCFF002ABF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACL "peggy-farnham:USC413,peggy-farnham:USC413_H3K4me1_SKNSH_Rep2" ENCFF002ABF Illumina Genome Analyzer IIx 2016-10-26T17:36:52.658337+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082VzQ0369KPb3j15B4p90X ENCSR000FCS https://www.encodeproject.org/experiments/ENCSR000FCS "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-SH immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF563HHK https://www.encodeproject.org/files/ENCFF563HHK/@@download/ENCFF563HHK.bam ENCFF396UPA https://www.encodeproject.org/files/ENCFF396UPA/@@download/ENCFF396UPA.bam 30.1 M 0 29.8 M 0.990 SE 36 36 36 0.0 M 26.3 M 18.7 M 0.621 0.71 0.72 3.67 190 2.58 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/879aa8ef-7aea-469c-825d-1828ace149c2/@@download/cross_correlation_plot/ENCFF002ABH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACM "peggy-farnham:USC161_H3K4me3_SKNSH_Rep1,peggy-farnham:USC161" ENCFF002ABH Illumina Genome Analyzer IIx 2016-08-09T16:00:41.521023+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZGY003695JF5f203FJ6v6 ENCSR000FCS https://www.encodeproject.org/experiments/ENCSR000FCS "histone,histone modification,narrow histone mark" H3K4me3-human SK-N-SH immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF627OMT https://www.encodeproject.org/files/ENCFF627OMT/@@download/ENCFF627OMT.bam ENCFF885LPB https://www.encodeproject.org/files/ENCFF885LPB/@@download/ENCFF885LPB.bam 25.9 M 0 19.7 M 0.761 SE 50 36 36 0.0 M 14.7 M 12.4 M 0.478 0.84 0.85 6.58 140 2.54 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b632dde-1982-42a4-87fd-91d9fc5fb496/@@download/cross_correlation_plot/ENCFF002ABK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACN "peggy-farnham:USC480,peggy-farnham:USC480_H3K4me3_SKNSH_Rep2" ENCFF002ABK HiSeq 2000 2016-08-09T16:00:54.035986+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByZZGb803690qf1GGj2xqqQZ ENCSR000FCT https://www.encodeproject.org/experiments/ENCSR000FCT "histone,histone modification,broad histone mark" H3K9me3-human SK-N-SH immortalized cell line 1 peggy-farnham ENCODE2 GRCh38 ENCFF824JVL https://www.encodeproject.org/files/ENCFF824JVL/@@download/ENCFF824JVL.bam ENCFF316IKJ https://www.encodeproject.org/files/ENCFF316IKJ/@@download/ENCFF316IKJ.bam 18.5 M 0 17.7 M 0.958 SE 36 36 native 0.0 M 8.2 M 6.2 M 0.337 0.76 0.75 3.80 210 1.11 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/f11005f2-bc0c-4a8b-9807-fd7f59934ff5/@@download/cross_correlation_plot/ENCFF002ABI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACO "peggy-farnham:USC162,peggy-farnham:USC162_H3K9me3_SKNSH_Rep1" ENCFF002ABI Illumina Genome Analyzer IIx 2016-10-26T17:57:47.342506+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0823Gj03698F1qV3kBFq2zK ENCSR000FCT https://www.encodeproject.org/experiments/ENCSR000FCT "histone,histone modification,broad histone mark" H3K9me3-human SK-N-SH immortalized cell line 2 peggy-farnham ENCODE2 GRCh38 ENCFF313APZ https://www.encodeproject.org/files/ENCFF313APZ/@@download/ENCFF313APZ.bam ENCFF618UHP https://www.encodeproject.org/files/ENCFF618UHP/@@download/ENCFF618UHP.bam 38.3 M 0 37.8 M 0.987 SE 36 36 native 0.0 M 26.3 M 25.5 M 0.665 0.97 0.97 38.50 180 1.01 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf7b7686-bd6e-4252-8cb2-f02c3acfd189/@@download/cross_correlation_plot/ENCFF002ABJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB555ACP "peggy-farnham:USC414,peggy-farnham:USC414_H3K9me3_SKNSH_Rep2" ENCFF002ABJ Illumina Genome Analyzer IIx 2016-10-26T18:07:07.801564+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0823Xj0369BqVfYq19ZB8xV ENCSR000BPS https://www.encodeproject.org/experiments/ENCSR000BPS transcription factor ATF3-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF697IMJ https://www.encodeproject.org/files/ENCFF697IMJ/@@download/ENCFF697IMJ.bam ENCFF798VAK https://www.encodeproject.org/files/ENCFF798VAK/@@download/ENCFF798VAK.bam 38.7 M 0 31.5 M 0.814 SE 36 36 native 0.0 M 23.4 M 21.4 M 0.554 0.93 0.93 14.70 170 1.08 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/5dbeebb9-6e37-4bed-8ca1-90e9c992a3d4/@@download/cross_correlation_plot/ENCFF000MWR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFZ richard-myers:SL6010 ENCFF000MWR Illumina Genome Analyzer IIx 2016-12-10T21:21:28.135201+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1633XQ03690xXYVJ7Fj2bz7 ENCSR000BPS https://www.encodeproject.org/experiments/ENCSR000BPS transcription factor ATF3-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF523LJK https://www.encodeproject.org/files/ENCFF523LJK/@@download/ENCFF523LJK.bam ENCFF675HNB https://www.encodeproject.org/files/ENCFF675HNB/@@download/ENCFF675HNB.bam 51.3 M 0 40.2 M 0.783 SE 36 36 native 0.0 M 30.5 M 29.1 M 0.567 0.97 0.97 31.48 135 1.04 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/bccaa353-bf29-4711-8f36-4ae0cafd85e3/@@download/cross_correlation_plot/ENCFF000MWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFY richard-myers:SL7273 ENCFF000MWV Illumina Genome Analyzer IIx 2016-12-10T21:53:05.546882+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1633g8036904pZZ8v3bkg2J ENCSR000BQH https://www.encodeproject.org/experiments/ENCSR000BQH transcription factor BCL3-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF017BBF https://www.encodeproject.org/files/ENCFF017BBF/@@download/ENCFF017BBF.bam ENCFF319BCR https://www.encodeproject.org/files/ENCFF319BCR/@@download/ENCFF319BCR.bam 44.3 M 0 29.3 M 0.663 SE 36 36 native 0.0 M 20.1 M 17.0 M 0.384 0.87 0.88 8.24 145 1.07 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/eddc0612-b9cf-4fb3-9ac9-838478ea93fd/@@download/cross_correlation_plot/ENCFF000MXC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JID richard-myers:SL6596 ENCFF000MXC Illumina Genome Analyzer IIx 2016-12-11T04:14:55.049555+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1657PQ0369BgG8x1ygv1XFV ENCSR000BQH https://www.encodeproject.org/experiments/ENCSR000BQH transcription factor BCL3-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF421BVL https://www.encodeproject.org/files/ENCFF421BVL/@@download/ENCFF421BVL.bam ENCFF711JRX https://www.encodeproject.org/files/ENCFF711JRX/@@download/ENCFF711JRX.bam 49.1 M 0 41.9 M 0.853 SE 36 36 native 0.0 M 31.3 M 30.3 M 0.617 0.98 0.98 43.48 120 1.05 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/72e17206-94bb-49b8-a07d-9b79ab34b42e/@@download/cross_correlation_plot/ENCFF000MXD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIC richard-myers:SL7109 ENCFF000MXD Illumina Genome Analyzer IIx 2016-12-11T04:25:09.189789+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1657ZQ0369KQ3Yk1yz1kggY ENCSR000BUB https://www.encodeproject.org/experiments/ENCSR000BUB transcription factor CEBPB-human A549 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BKZ https://www.encodeproject.org/experiments/ENCSR000BKZ control Control-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF291OFI https://www.encodeproject.org/files/ENCFF291OFI/@@download/ENCFF291OFI.bam ENCFF625RKU https://www.encodeproject.org/files/ENCFF625RKU/@@download/ENCFF625RKU.bam 46.6 M 0 23.8 M 0.510 SE 36 36 native 0.0 M 13.7 M 13.6 M 0.292 0.99 0.99 157.88 75 1.05 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/4fdde389-d086-4182-96c8-d62c61d6e7a7/@@download/cross_correlation_plot/ENCFF000NGC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHL richard-myers:SL307 ENCFF000NGC Illumina Genome Analyzer IIx 2016-10-26T17:37:26.196637+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Pv8036923pJJqk9xzYz6 ENCSR000BLA https://www.encodeproject.org/experiments/ENCSR000BLA control Control-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF466VLR https://www.encodeproject.org/files/ENCFF466VLR/@@download/ENCFF466VLR.bam ENCFF594SCK https://www.encodeproject.org/files/ENCFF594SCK/@@download/ENCFF594SCK.bam 31.2 M 0 21.8 M 0.700 SE 36 36 native 0.0 M 13.7 M 12.8 M 0.412 0.94 0.94 16.39 85 1.14 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/769a5b27-4e91-431a-a3bc-771b1c80d09a/@@download/cross_correlation_plot/ENCFF000NFZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPJ richard-myers:SL335 ENCFF000NFZ Illumina Genome Analyzer IIx 2016-10-26T17:38:18.156491+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820kQ03697KPkyX9BPPpvF ENCSR000BNB https://www.encodeproject.org/experiments/ENCSR000BNB control Control-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF250FLP https://www.encodeproject.org/files/ENCFF250FLP/@@download/ENCFF250FLP.bam ENCFF996WPX https://www.encodeproject.org/files/ENCFF996WPX/@@download/ENCFF996WPX.bam 19.5 M 0 15.4 M 0.788 SE 36 36 native 0.0 M 11.1 M 10.9 M 0.560 0.99 0.99 93.22 120 1.01 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/388c2003-e379-4ba0-8d4e-acbeb45b574e/@@download/cross_correlation_plot/ENCFF000NFM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHA richard-myers:SL474 ENCFF000NFM Illumina Genome Analyzer IIx 2016-10-26T17:37:07.701577+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827f8036923pJJqk9xzYky ENCSR000BNC https://www.encodeproject.org/experiments/ENCSR000BNC control Control-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF353UFN https://www.encodeproject.org/files/ENCFF353UFN/@@download/ENCFF353UFN.bam ENCFF479FDR https://www.encodeproject.org/files/ENCFF479FDR/@@download/ENCFF479FDR.bam 29.2 M 0 21.2 M 0.725 SE 36 36 native 0.0 M 14.9 M 14.6 M 0.501 0.99 0.99 95.20 100 1.01 0.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/0adf7c90-478e-4225-8186-d8731092009c/@@download/cross_correlation_plot/ENCFF000NFR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIJ richard-myers:SL475 ENCFF000NFR Illumina Genome Analyzer IIx 2016-10-26T17:38:34.857596+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082G9j0369F7fQjy59kFj0q ENCSR000BPD https://www.encodeproject.org/experiments/ENCSR000BPD control Control-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF656HEF https://www.encodeproject.org/files/ENCFF656HEF/@@download/ENCFF656HEF.bam ENCFF287ELX https://www.encodeproject.org/files/ENCFF287ELX/@@download/ENCFF287ELX.bam 62.5 M 0 49.5 M 0.792 SE 36 36 native 0.0 M 36.8 M 36.0 M 0.577 0.99 0.99 109.54 110 1.01 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/67f1ef5b-1d43-4629-ae55-28ea8f1d9e0c/@@download/cross_correlation_plot/ENCFF000NGH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIB richard-myers:SL6021 ENCFF000NGH Illumina Genome Analyzer IIx 2016-10-26T17:40:06.227691+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082BVQ0369FFbbzvx9jvvvZ ENCSR000BPN https://www.encodeproject.org/experiments/ENCSR000BPN control Control-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF570JEY https://www.encodeproject.org/files/ENCFF570JEY/@@download/ENCFF570JEY.bam ENCFF102VFU https://www.encodeproject.org/files/ENCFF102VFU/@@download/ENCFF102VFU.bam 28.7 M 0 27.0 M 0.941 SE 36 36 native 0.0 M 20.7 M 20.2 M 0.705 0.98 0.98 53.36 80 1.02 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/0fb549fb-ab52-4c24-b79a-305ac9f3aa87/@@download/cross_correlation_plot/ENCFF000NGB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSI richard-myers:SL3978 ENCFF000NGB Illumina Genome Analyzer IIx 2016-10-26T17:35:35.524999+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082V0j0369P876f29P7PjZ0 ENCSR000BPO https://www.encodeproject.org/experiments/ENCSR000BPO control Control-human A549 immortalized cell line richard-myers ENCODE2 no fastqs unreviewed ENCSR000BVQ https://www.encodeproject.org/experiments/ENCSR000BVQ control Control-human A549 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BRA https://www.encodeproject.org/experiments/ENCSR000BRA transcription factor CREB1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF056OHH https://www.encodeproject.org/files/ENCFF056OHH/@@download/ENCFF056OHH.bam ENCFF741ODT https://www.encodeproject.org/files/ENCFF741ODT/@@download/ENCFF741ODT.bam 26.2 M 0 19.8 M 0.756 SE 36 36 native 0.0 M 15.2 M 10.3 M 0.393 0.68 0.66 2.62 125 1.28 3.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e83dc4d-f485-4c83-8f06-c71e20d25fda/@@download/cross_correlation_plot/ENCFF000MXO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSA richard-myers:SL1668 ENCFF000MXO Illumina Genome Analyzer IIx 2017-04-21T05:15:26.906671+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3vj8Kj03695yyf90qkzfggv ENCSR000BRB https://www.encodeproject.org/experiments/ENCSR000BRB transcription factor CREB1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF153QKB https://www.encodeproject.org/files/ENCFF153QKB/@@download/ENCFF153QKB.bam ENCFF558LGJ https://www.encodeproject.org/files/ENCFF558LGJ/@@download/ENCFF558LGJ.bam 44.5 M 0 30.1 M 0.676 SE 36 36 native 0.0 M 22.0 M 10.1 M 0.227 0.46 0.41 1.41 120 2.67 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/39dd91eb-9bc9-4329-beac-86af1e6a447c/@@download/cross_correlation_plot/ENCFF000MXW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXB richard-myers:SL1667 ENCFF000MXW Illumina Genome Analyzer IIx 2016-12-11T00:12:43.039150+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163P7Q03697K4B1J71pxzkk ENCSR000BRB https://www.encodeproject.org/experiments/ENCSR000BRB transcription factor CREB1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF503TSJ https://www.encodeproject.org/files/ENCFF503TSJ/@@download/ENCFF503TSJ.bam ENCFF329ZIE https://www.encodeproject.org/files/ENCFF329ZIE/@@download/ENCFF329ZIE.bam 24.9 M 0 19.7 M 0.791 SE 36 36 native 0.0 M 14.5 M 12.0 M 0.480 0.83 0.82 5.56 110 1.31 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bd97c68-fa46-42cd-83e2-85739a65b7f1/@@download/cross_correlation_plot/ENCFF000MXR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXC richard-myers:SL3897 ENCFF000MXR Illumina Genome Analyzer IIx 2016-12-10T22:23:20.229727+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163PG803697xKX68qyy2kG9 ENCSR000BRC https://www.encodeproject.org/experiments/ENCSR000BRC transcription factor CREB1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF121EED https://www.encodeproject.org/files/ENCFF121EED/@@download/ENCFF121EED.bam ENCFF254ENX https://www.encodeproject.org/files/ENCFF254ENX/@@download/ENCFF254ENX.bam 25.4 M 0 21.5 M 0.844 SE 36 36 native 0.0 M 15.9 M 13.1 M 0.517 0.83 0.83 5.56 115 1.25 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/a3feebe0-ff3c-427b-984d-e60b239bb9eb/@@download/cross_correlation_plot/ENCFF000MXT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUM richard-myers:SL3898 ENCFF000MXT Illumina Genome Analyzer IIx 2017-04-21T05:16:58.200184+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3vj87Q036933Vf60qvF0JX9 ENCSR000BHV https://www.encodeproject.org/experiments/ENCSR000BHV "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF358BTX https://www.encodeproject.org/files/ENCFF358BTX/@@download/ENCFF358BTX.bam ENCFF978RNV https://www.encodeproject.org/files/ENCFF978RNV/@@download/ENCFF978RNV.bam 44.1 M 0 26.5 M 0.600 SE 36 36 native 0.0 M 20.6 M 14.4 M 0.327 0.70 0.71 3.29 110 2.49 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/d16eb103-0960-496c-8517-e4e705ab5a31/@@download/cross_correlation_plot/ENCFF000MYG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNK richard-myers:SL1204 ENCFF000MYG Illumina Genome Analyzer IIx 2016-12-11T04:51:38.820367+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1660K003692yykb1zBpz81V ENCSR000BHV https://www.encodeproject.org/experiments/ENCSR000BHV "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF551SVA https://www.encodeproject.org/files/ENCFF551SVA/@@download/ENCFF551SVA.bam ENCFF335OXL https://www.encodeproject.org/files/ENCFF335OXL/@@download/ENCFF335OXL.bam 20.9 M 0 17.1 M 0.819 SE 36 36 native 0.0 M 13.4 M 6.1 M 0.294 0.46 0.41 1.42 110 2.13 2.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecaebbb4-e37a-40e1-ae4a-0b5fb6f11b1d/@@download/cross_correlation_plot/ENCFF000MYE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNL richard-myers:SL1077 ENCFF000MYE Illumina Genome Analyzer IIx 2016-12-11T04:42:16.974292+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1660Xj03692yykb1zBpz81v ENCSR000BHW https://www.encodeproject.org/experiments/ENCSR000BHW "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF827ZZD https://www.encodeproject.org/files/ENCFF827ZZD/@@download/ENCFF827ZZD.bam ENCFF757KXX https://www.encodeproject.org/files/ENCFF757KXX/@@download/ENCFF757KXX.bam 41.0 M 0 24.8 M 0.605 SE 36 36 native 0.0 M 19.2 M 14.4 M 0.351 0.75 0.75 3.79 135 1.74 2.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8683d1f-420b-449c-af9b-1ff669ea5be4/@@download/cross_correlation_plot/ENCFF000MYN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOW richard-myers:SL1205 ENCFF000MYN Illumina Genome Analyzer IIx 2016-12-11T04:53:32.995982+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1662V0036904pZZ8v3bkg91 ENCSR000BHW https://www.encodeproject.org/experiments/ENCSR000BHW "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF434JDR https://www.encodeproject.org/files/ENCFF434JDR/@@download/ENCFF434JDR.bam ENCFF039BAP https://www.encodeproject.org/files/ENCFF039BAP/@@download/ENCFF039BAP.bam 20.9 M 0 15.7 M 0.751 SE 36 36 native 0.0 M 12.4 M 5.9 M 0.283 0.48 0.41 1.36 110 3.34 2.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa569c8a-6a4d-4497-8fc0-f6c492e69c66/@@download/cross_correlation_plot/ENCFF000MYJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZH richard-myers:SL1078 ENCFF000MYJ Illumina Genome Analyzer IIx 2016-12-11T04:43:59.925483+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1662f00369KQ3Yk1yz1kgy8 ENCSR000BTC https://www.encodeproject.org/experiments/ENCSR000BTC transcription factor E2F6-human A549 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BPT https://www.encodeproject.org/experiments/ENCSR000BPT transcription factor ELF1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF204HXG https://www.encodeproject.org/files/ENCFF204HXG/@@download/ENCFF204HXG.bam ENCFF164SSQ https://www.encodeproject.org/files/ENCFF164SSQ/@@download/ENCFF164SSQ.bam 45.3 M 0 39.3 M 0.868 SE 36 36 native 0.0 M 29.3 M 27.6 M 0.609 0.95 0.95 20.65 100 1.04 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4531d57-9c80-42c8-a5dc-00171f629628/@@download/cross_correlation_plot/ENCFF000MZG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQW richard-myers:SL6436 ENCFF000MZG Illumina Genome Analyzer IIx 2016-12-11T03:14:52.864813+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16469803697K4B1J71pxzzb ENCSR000BPT https://www.encodeproject.org/experiments/ENCSR000BPT transcription factor ELF1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF264UCL https://www.encodeproject.org/files/ENCFF264UCL/@@download/ENCFF264UCL.bam ENCFF878CGJ https://www.encodeproject.org/files/ENCFF878CGJ/@@download/ENCFF878CGJ.bam 41.6 M 0 33.9 M 0.815 SE 36 36 native 0.0 M 26.1 M 24.8 M 0.597 0.96 0.96 27.13 105 1.09 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9f66cd3-cc71-4f11-84eb-ef1c3e5cb27e/@@download/cross_correlation_plot/ENCFF000MZF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTJ richard-myers:SL7113 ENCFF000MZF Illumina Genome Analyzer IIx 2016-12-11T03:10:14.447510+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1646Jj036969X0jJ6p3ffpb ENCSR000BPW https://www.encodeproject.org/experiments/ENCSR000BPW transcription factor EP300-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF417IMO https://www.encodeproject.org/files/ENCFF417IMO/@@download/ENCFF417IMO.bam ENCFF848ZGM https://www.encodeproject.org/files/ENCFF848ZGM/@@download/ENCFF848ZGM.bam 36.7 M 0 32.7 M 0.889 SE 36 36 native 0.0 M 25.0 M 22.8 M 0.620 0.93 0.93 15.38 185 1.21 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/0bbf1e07-f926-4221-be09-af8a9069cb46/@@download/cross_correlation_plot/ENCFF000NEG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJM richard-myers:SL6437 ENCFF000NEG Illumina Genome Analyzer IIx 2016-12-10T20:34:50.222505+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162YJQ0369B6ZyvJ8yKQX8K ENCSR000BPW https://www.encodeproject.org/experiments/ENCSR000BPW transcription factor EP300-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF008FSR https://www.encodeproject.org/files/ENCFF008FSR/@@download/ENCFF008FSR.bam ENCFF580PVH https://www.encodeproject.org/files/ENCFF580PVH/@@download/ENCFF580PVH.bam 39.1 M 0 29.9 M 0.765 SE 36 36 native 0.0 M 23.3 M 21.6 M 0.552 0.94 0.94 17.85 150 1.23 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2204e47-3375-465c-8c0a-436af4e27e41/@@download/cross_correlation_plot/ENCFF000NEI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJL richard-myers:SL7115 ENCFF000NEI Illumina Genome Analyzer IIx 2016-12-10T20:38:39.575788+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162YX803696z7JqGk4YzxxP ENCSR000BPU https://www.encodeproject.org/experiments/ENCSR000BPU transcription factor ETS1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF714CRL https://www.encodeproject.org/files/ENCFF714CRL/@@download/ENCFF714CRL.bam ENCFF917SFY https://www.encodeproject.org/files/ENCFF917SFY/@@download/ENCFF917SFY.bam 26.2 M 0 22.3 M 0.851 SE 36 36 native 0.0 M 17.3 M 15.6 M 0.596 0.91 0.92 14.06 120 1.12 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4c43cee-d4ee-4535-9244-5165293a00c5/@@download/cross_correlation_plot/ENCFF000MZH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBS richard-myers:SL6600 ENCFF000MZH Illumina Genome Analyzer IIx 2016-12-10T20:53:50.697505+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162z58036933PVVJ7Qq019J ENCSR000BPU https://www.encodeproject.org/experiments/ENCSR000BPU transcription factor ETS1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF824KPX https://www.encodeproject.org/files/ENCFF824KPX/@@download/ENCFF824KPX.bam ENCFF193VBZ https://www.encodeproject.org/files/ENCFF193VBZ/@@download/ENCFF193VBZ.bam 44.4 M 0 39.1 M 0.881 SE 36 36 native 0.0 M 29.8 M 29.0 M 0.653 0.98 0.98 51.53 95 1.03 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/9263382d-d556-4225-8299-4d6a871b7d25/@@download/cross_correlation_plot/ENCFF000MZO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBR richard-myers:SL7108 ENCFF000MZO Illumina Genome Analyzer IIx 2016-12-10T21:17:50.129451+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162zB803690xXYVJ7Fj2byK ENCSR000BQO https://www.encodeproject.org/experiments/ENCSR000BQO transcription factor FOSL2-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF585INN https://www.encodeproject.org/files/ENCFF585INN/@@download/ENCFF585INN.bam ENCFF717EFF https://www.encodeproject.org/files/ENCFF717EFF/@@download/ENCFF717EFF.bam 46.9 M 0 36.5 M 0.779 SE 36 36 native 0.0 M 28.1 M 26.1 M 0.556 0.94 0.94 18.20 110 1.15 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d68145e-a4de-443c-8741-b6893f5f36af/@@download/cross_correlation_plot/ENCFF000MZW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDC richard-myers:SL7116 ENCFF000MZW Illumina Genome Analyzer IIx 2016-12-11T04:01:50.708388+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164k1j03697xKX68qyy2kPV ENCSR000BQO https://www.encodeproject.org/experiments/ENCSR000BQO transcription factor FOSL2-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF125MJO https://www.encodeproject.org/files/ENCFF125MJO/@@download/ENCFF125MJO.bam ENCFF529FWD https://www.encodeproject.org/files/ENCFF529FWD/@@download/ENCFF529FWD.bam 36.5 M 0 32.7 M 0.897 SE 36 36 native 0.0 M 25.8 M 22.2 M 0.609 0.88 0.88 8.83 150 1.37 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a394a8f-73cb-41f1-a83e-2c67a7821cf2/@@download/cross_correlation_plot/ENCFF000MZT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDB richard-myers:SL8077 ENCFF000MZT Illumina Genome Analyzer IIx 2016-12-11T03:57:06.049530+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164k6803692yykb1zBpz7gx ENCSR000BPX https://www.encodeproject.org/experiments/ENCSR000BPX transcription factor FOXA1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF086NWX https://www.encodeproject.org/files/ENCFF086NWX/@@download/ENCFF086NWX.bam ENCFF522ITC https://www.encodeproject.org/files/ENCFF522ITC/@@download/ENCFF522ITC.bam 29.9 M 0 27.6 M 0.923 SE 36 36 native 0.0 M 21.2 M 16.9 M 0.566 0.80 0.80 4.80 130 1.47 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/a540046c-a680-4c12-8e17-6479160eb401/@@download/cross_correlation_plot/ENCFF000MZX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBJ richard-myers:SL2666 ENCFF000MZX Illumina Genome Analyzer IIx 2016-12-11T04:06:20.199941+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1654Vj0369KbxV61z4GFvY2 ENCSR000BPX https://www.encodeproject.org/experiments/ENCSR000BPX transcription factor FOXA1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF946SJM https://www.encodeproject.org/files/ENCFF946SJM/@@download/ENCFF946SJM.bam ENCFF979UTR https://www.encodeproject.org/files/ENCFF979UTR/@@download/ENCFF979UTR.bam 22.0 M 0 20.2 M 0.918 SE 36 36 native 0.0 M 15.4 M 13.7 M 0.624 0.89 0.90 10.17 120 1.82 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/dda4e59c-60fc-46f9-bc0c-8e7b9635c091/@@download/cross_correlation_plot/ENCFF000NAA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFJ richard-myers:SL3250 ENCFF000NAA Illumina Genome Analyzer IIx 2016-12-11T04:02:39.570317+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1654fj03695F8Bk64ff074Y ENCSR000BRD https://www.encodeproject.org/experiments/ENCSR000BRD transcription factor FOXA1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF285GBC https://www.encodeproject.org/files/ENCFF285GBC/@@download/ENCFF285GBC.bam ENCFF142VIE https://www.encodeproject.org/files/ENCFF142VIE/@@download/ENCFF142VIE.bam 29.3 M 0 27.0 M 0.920 SE 36 36 native 0.0 M 20.9 M 16.7 M 0.570 0.80 0.80 4.82 135 1.46 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/3df283bc-d014-476b-a2c2-9e7fd401bd12/@@download/cross_correlation_plot/ENCFF000NAI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVV richard-myers:SL2665 ENCFF000NAI Illumina Genome Analyzer IIx 2016-12-11T04:02:54.322644+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16513803692yykb1zBpz7p5 ENCSR000BRD https://www.encodeproject.org/experiments/ENCSR000BRD transcription factor FOXA1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF325BGM https://www.encodeproject.org/files/ENCFF325BGM/@@download/ENCFF325BGM.bam ENCFF100NDO https://www.encodeproject.org/files/ENCFF100NDO/@@download/ENCFF100NDO.bam 24.8 M 0 22.0 M 0.888 SE 36 36 native 0.0 M 16.4 M 13.3 M 0.534 0.81 0.82 5.43 125 1.92 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/418f65a4-1742-40bd-a8f6-6560a5a08aea/@@download/cross_correlation_plot/ENCFF000NAH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQO richard-myers:SL3251 ENCFF000NAH Illumina Genome Analyzer IIx 2016-12-11T04:00:26.175669+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1651800369PvYp91zK1PxKk ENCSR000BRE https://www.encodeproject.org/experiments/ENCSR000BRE transcription factor FOXA2-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF381ISL https://www.encodeproject.org/files/ENCFF381ISL/@@download/ENCFF381ISL.bam ENCFF081TER https://www.encodeproject.org/files/ENCFF081TER/@@download/ENCFF081TER.bam 56.3 M 0 33.8 M 0.601 SE 36 36 native 0.0 M 23.5 M 6.6 M 0.118 0.28 0.21 1.04 140 2.90 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d154235-cdda-4ff7-b738-3d75b2901701/@@download/cross_correlation_plot/ENCFF000NAU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KET richard-myers:SL3077 ENCFF000NAU HiSeq 2000 2016-12-11T06:50:48.209177+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166JYQ0369PvYp91zK1PxpG ENCSR000BRE https://www.encodeproject.org/experiments/ENCSR000BRE transcription factor FOXA2-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF459MFF https://www.encodeproject.org/files/ENCFF459MFF/@@download/ENCFF459MFF.bam ENCFF522TNS https://www.encodeproject.org/files/ENCFF522TNS/@@download/ENCFF522TNS.bam 20.4 M 0 17.7 M 0.865 SE 36 36 native 0.0 M 13.3 M 10.7 M 0.522 0.80 0.81 5.32 115 2.10 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/95e3e396-9829-41f1-a264-f7222fed719b/@@download/cross_correlation_plot/ENCFF000NAQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEV richard-myers:SL3253 ENCFF000NAQ Illumina Genome Analyzer IIx 2016-12-11T04:57:21.721096+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Jjj0369BJyPz9fb9qYYx ENCSR000BPY https://www.encodeproject.org/experiments/ENCSR000BPY transcription factor GABPA-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF485RGA https://www.encodeproject.org/files/ENCFF485RGA/@@download/ENCFF485RGA.bam ENCFF077CNJ https://www.encodeproject.org/files/ENCFF077CNJ/@@download/ENCFF077CNJ.bam 45.5 M 0 36.4 M 0.800 SE 36 36 native 0.0 M 28.1 M 24.3 M 0.533 0.88 0.91 12.95 150 1.37 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/71424733-b97e-4378-964a-6ed460d1e287/@@download/cross_correlation_plot/ENCFF000NBA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLF richard-myers:SL6015 ENCFF000NBA Illumina Genome Analyzer IIx 2016-12-11T02:36:04.829401+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163gfj03690xXYVJ7Fj2f2J ENCSR000BPY https://www.encodeproject.org/experiments/ENCSR000BPY transcription factor GABPA-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF904FSU https://www.encodeproject.org/files/ENCFF904FSU/@@download/ENCFF904FSU.bam ENCFF284ZYC https://www.encodeproject.org/files/ENCFF284ZYC/@@download/ENCFF284ZYC.bam 43.5 M 0 36.2 M 0.834 SE 36 36 native 0.0 M 27.2 M 24.7 M 0.569 0.93 0.94 17.88 140 1.20 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/992a981f-0297-4a89-a458-a43633d84901/@@download/cross_correlation_plot/ENCFF000NAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLG richard-myers:SL6595 ENCFF000NAY Illumina Genome Analyzer IIx 2016-12-11T02:42:33.939990+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163gqQ0369445BJJ915X9j4 ENCSR000BTI https://www.encodeproject.org/experiments/ENCSR000BTI transcription factor GATA3-human A549 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BRF https://www.encodeproject.org/experiments/ENCSR000BRF transcription factor JUND-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF599KFZ https://www.encodeproject.org/files/ENCFF599KFZ/@@download/ENCFF599KFZ.bam ENCFF455WFJ https://www.encodeproject.org/files/ENCFF455WFJ/@@download/ENCFF455WFJ.bam 27.1 M 0 22.9 M 0.844 SE 36 36 native 0.0 M 16.8 M 12.2 M 0.451 0.73 0.71 3.26 120 1.23 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed1b7510-efcd-43ec-b29a-592940105516/@@download/cross_correlation_plot/ENCFF000NDF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNJ richard-myers:SL3900 ENCFF000NDF Illumina Genome Analyzer IIx 2016-11-30T18:15:22.973778+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4QP80369KQ15V00X1qjkf ENCSR000BRF https://www.encodeproject.org/experiments/ENCSR000BRF transcription factor JUND-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF503HYC https://www.encodeproject.org/files/ENCFF503HYC/@@download/ENCFF503HYC.bam ENCFF372XIB https://www.encodeproject.org/files/ENCFF372XIB/@@download/ENCFF372XIB.bam 37.9 M 0 31.4 M 0.828 SE 36 36 native 0.0 M 22.5 M 17.9 M 0.472 0.80 0.79 4.59 95 1.22 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c150a63-2607-4ede-93ec-79c25fcb341b/@@download/cross_correlation_plot/ENCFF000NDH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNI richard-myers:SL4698 ENCFF000NDH Illumina Genome Analyzer IIx 2016-11-30T18:15:19.533606+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4Qf803692k1PXjJQV3gQY ENCSR000BTJ https://www.encodeproject.org/experiments/ENCSR000BTJ transcription factor MAX-human A549 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BHE https://www.encodeproject.org/experiments/ENCSR000BHE transcription factor NR3C1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF230UCT https://www.encodeproject.org/files/ENCFF230UCT/@@download/ENCFF230UCT.bam ENCFF859DOP https://www.encodeproject.org/files/ENCFF859DOP/@@download/ENCFF859DOP.bam 27.2 M 0 22.3 M 0.818 SE 36 36 native 0.0 M 15.3 M 14.9 M 0.546 0.97 0.97 33.40 105 1.06 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e9ffb94-0666-4040-ae05-8632612edf44/@@download/cross_correlation_plot/ENCFF000NBL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBZ richard-myers:SL884 ENCFF000NBL Illumina Genome Analyzer IIx 2016-12-11T03:02:24.272384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16487003697vfpg2qKbyZQ3 ENCSR000BHE https://www.encodeproject.org/experiments/ENCSR000BHE transcription factor NR3C1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF577DPU https://www.encodeproject.org/files/ENCFF577DPU/@@download/ENCFF577DPU.bam ENCFF557CPW https://www.encodeproject.org/files/ENCFF557CPW/@@download/ENCFF557CPW.bam 21.1 M 0 17.2 M 0.814 SE 36 36 native 0.0 M 11.6 M 11.0 M 0.523 0.95 0.95 20.48 105 1.06 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/c93a8c4c-aa82-40eb-89df-9260459a79b6/@@download/cross_correlation_plot/ENCFF000NBR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBY richard-myers:SL885 ENCFF000NBR Illumina Genome Analyzer IIx 2016-12-11T02:58:45.406375+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1648Fj03697vfpg2qKbyZQJ ENCSR000BHF https://www.encodeproject.org/experiments/ENCSR000BHF transcription factor NR3C1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF599NFC https://www.encodeproject.org/files/ENCFF599NFC/@@download/ENCFF599NFC.bam ENCFF007KKM https://www.encodeproject.org/files/ENCFF007KKM/@@download/ENCFF007KKM.bam 25.7 M 0 21.7 M 0.846 SE 36 36 native 0.0 M 15.4 M 14.7 M 0.574 0.96 0.97 34.45 120 1.55 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/2fe9a24d-9199-4abb-9153-5633d0928235/@@download/cross_correlation_plot/ENCFF000NBZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYP richard-myers:SL882 ENCFF000NBZ Illumina Genome Analyzer IIx 2016-12-10T21:39:07.597233+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16388003690xXYVJ7Fj2f0F ENCSR000BHF https://www.encodeproject.org/experiments/ENCSR000BHF transcription factor NR3C1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF703HTN https://www.encodeproject.org/files/ENCFF703HTN/@@download/ENCFF703HTN.bam ENCFF384SJW https://www.encodeproject.org/files/ENCFF384SJW/@@download/ENCFF384SJW.bam 21.5 M 0 18.9 M 0.878 SE 36 36 native 0.0 M 13.6 M 13.0 M 0.603 0.95 0.96 27.11 140 1.64 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d5aec21-226c-404e-b2ee-c6db537fda3c/@@download/cross_correlation_plot/ENCFF000NBX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYQ richard-myers:SL883 ENCFF000NBX Illumina Genome Analyzer IIx 2016-12-10T21:26:51.130778+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1638Gj03695Kj1j8qPQgkPv ENCSR000BHG https://www.encodeproject.org/experiments/ENCSR000BHG transcription factor NR3C1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF160JFP https://www.encodeproject.org/files/ENCFF160JFP/@@download/ENCFF160JFP.bam ENCFF512MUR https://www.encodeproject.org/files/ENCFF512MUR/@@download/ENCFF512MUR.bam 30.4 M 0 22.6 M 0.744 SE 36 36 native 0.0 M 15.3 M 15.1 M 0.495 0.98 0.99 70.62 130 1.11 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbc481da-852b-4232-948a-24f75ef40c43/@@download/cross_correlation_plot/ENCFF000NCF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JAX richard-myers:SL880 ENCFF000NCF Illumina Genome Analyzer IIx 2016-12-11T02:25:51.074002+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163qJQ0369Bxb30J6x5bZ98 ENCSR000BHG https://www.encodeproject.org/experiments/ENCSR000BHG transcription factor NR3C1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF296AWB https://www.encodeproject.org/files/ENCFF296AWB/@@download/ENCFF296AWB.bam ENCFF690ZBC https://www.encodeproject.org/files/ENCFF690ZBC/@@download/ENCFF690ZBC.bam 28.5 M 0 23.1 M 0.810 SE 36 36 native 0.0 M 16.2 M 15.6 M 0.546 0.96 0.97 32.56 120 1.24 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/893d4045-26e3-4d76-89bd-b3ae5b3e49a1/@@download/cross_correlation_plot/ENCFF000NCD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIN richard-myers:SL881 ENCFF000NCD Illumina Genome Analyzer IIx 2016-12-11T02:25:57.781310+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163qXQ03699K237J9jY9kbb ENCSR000BIO https://www.encodeproject.org/experiments/ENCSR000BIO transcription factor NR3C1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF440RZX https://www.encodeproject.org/files/ENCFF440RZX/@@download/ENCFF440RZX.bam ENCFF959VOV https://www.encodeproject.org/files/ENCFF959VOV/@@download/ENCFF959VOV.bam 29.5 M 0 22.7 M 0.769 SE 36 36 native 0.0 M 15.4 M 15.1 M 0.510 0.98 0.98 42.71 105 1.04 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6f9e49d-064a-4ba1-958b-890ba7e54008/@@download/cross_correlation_plot/ENCFF000NCL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHS richard-myers:SL878 ENCFF000NCL Illumina Genome Analyzer IIx 2016-12-10T21:01:42.473841+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1630v003692pJ09J76g5fpf ENCSR000BIO https://www.encodeproject.org/experiments/ENCSR000BIO transcription factor NR3C1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF058PCJ https://www.encodeproject.org/files/ENCFF058PCJ/@@download/ENCFF058PCJ.bam ENCFF623XBY https://www.encodeproject.org/files/ENCFF623XBY/@@download/ENCFF623XBY.bam 30.5 M 0 23.2 M 0.761 SE 36 36 native 0.0 M 15.8 M 15.3 M 0.502 0.97 0.97 33.00 100 1.04 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/c63b5317-2fb2-4b6d-8d1e-a880b34f60b2/@@download/cross_correlation_plot/ENCFF000NCO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNZ richard-myers:SL879 ENCFF000NCO Illumina Genome Analyzer IIx 2016-12-10T21:02:49.579851+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1631100369BgG8x1ygv1X0P ENCSR000BJR https://www.encodeproject.org/experiments/ENCSR000BJR transcription factor NR3C1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF602PRS https://www.encodeproject.org/files/ENCFF602PRS/@@download/ENCFF602PRS.bam ENCFF530CNR https://www.encodeproject.org/files/ENCFF530CNR/@@download/ENCFF530CNR.bam 61.5 M 0 14.8 M 0.241 SE 36 36 native 0.0 M 8.9 M 8.1 M 0.132 0.94 0.95 18.83 130 1.56 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/826d29bf-4c56-40f8-8ae5-adb01eab8f1f/@@download/cross_correlation_plot/ENCFF000NCS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHJ richard-myers:SL246 ENCFF000NCS Illumina Genome Analyzer IIx 2017-01-05T00:21:22.642235+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1fg6fj0369Kbx0VG4x73v4G ENCSR000BJR https://www.encodeproject.org/experiments/ENCSR000BJR transcription factor NR3C1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF293LDW https://www.encodeproject.org/files/ENCFF293LDW/@@download/ENCFF293LDW.bam ENCFF195MCG https://www.encodeproject.org/files/ENCFF195MCG/@@download/ENCFF195MCG.bam 58.8 M 0 19.2 M 0.326 SE 36 36 native 0.0 M 11.4 M 10.8 M 0.184 0.96 0.96 29.10 80 1.61 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/eee81493-161b-4769-8d8a-6d3f4ee2dcaa/@@download/cross_correlation_plot/ENCFF000NCU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHI richard-myers:SL304 ENCFF000NCU Illumina Genome Analyzer IIx 2017-01-05T00:21:52.858724+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1fg6vQ0369PjBfKG4QzQp95 ENCSR000BJT https://www.encodeproject.org/experiments/ENCSR000BJT transcription factor NR3C1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF717HZW https://www.encodeproject.org/files/ENCFF717HZW/@@download/ENCFF717HZW.bam ENCFF420KGI https://www.encodeproject.org/files/ENCFF420KGI/@@download/ENCFF420KGI.bam 36.0 M 0 14.0 M 0.388 SE 36 36 native 0.0 M 8.0 M 7.7 M 0.215 0.98 0.98 45.33 90 1.20 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/54af1bde-e630-471b-91bb-ed37a6ff327b/@@download/cross_correlation_plot/ENCFF000NDA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCR richard-myers:SL247 ENCFF000NDA Illumina Genome Analyzer IIx 2017-01-05T00:21:52.191991+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1fg65j0369Pyf0JG49f2zKG ENCSR000BJT https://www.encodeproject.org/experiments/ENCSR000BJT transcription factor NR3C1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF105WJU https://www.encodeproject.org/files/ENCFF105WJU/@@download/ENCFF105WJU.bam ENCFF614XTC https://www.encodeproject.org/files/ENCFF614XTC/@@download/ENCFF614XTC.bam 48.3 M 0 19.8 M 0.409 SE 36 36 native 0.0 M 12.2 M 11.4 M 0.237 0.94 0.94 15.14 60 1.20 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/abeeeb2a-63a0-4517-bb3b-a314605a65ea/@@download/cross_correlation_plot/ENCFF000NDD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCS richard-myers:SL305 ENCFF000NDD Illumina Genome Analyzer IIx 2017-01-05T00:22:06.750452+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1fg6F003699GG65G542pbv5 ENCSR000BTN https://www.encodeproject.org/experiments/ENCSR000BTN transcription factor PBX3-human A549 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BHH https://www.encodeproject.org/experiments/ENCSR000BHH transcription factor POLR2A-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF843BZC https://www.encodeproject.org/files/ENCFF843BZC/@@download/ENCFF843BZC.bam ENCFF537TSZ https://www.encodeproject.org/files/ENCFF537TSZ/@@download/ENCFF537TSZ.bam 15.5 M 0 10.6 M 0.683 SE 36 36 native 0.0 M 7.4 M 6.5 M 0.417 0.92 0.94 17.69 80 4.62 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ea07f2b-f968-46c5-ab0d-4ead11bc8905/@@download/cross_correlation_plot/ENCFF000NEZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMU richard-myers:SL245 ENCFF000NEZ Illumina Genome Analyzer IIx 2017-01-05T00:20:12.789681+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1ffxfQ0369BVx998v4QK3yY ENCSR000BHH https://www.encodeproject.org/experiments/ENCSR000BHH transcription factor POLR2A-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF014GUN https://www.encodeproject.org/files/ENCFF014GUN/@@download/ENCFF014GUN.bam ENCFF324RAL https://www.encodeproject.org/files/ENCFF324RAL/@@download/ENCFF324RAL.bam 36.9 M 0 18.9 M 0.511 SE 36 36 native 0.0 M 12.5 M 9.4 M 0.254 0.77 0.83 7.19 65 4.09 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/cdbfb9b1-a93d-431b-95e7-aee767209c89/@@download/cross_correlation_plot/ENCFF000NFG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMT richard-myers:SL334 ENCFF000NFG Illumina Genome Analyzer IIx 2017-01-05T00:21:04.214626+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1ffxqj0369FqfGQ51kVXZVP ENCSR000BHI https://www.encodeproject.org/experiments/ENCSR000BHI transcription factor POLR2A-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF593TPG https://www.encodeproject.org/files/ENCFF593TPG/@@download/ENCFF593TPG.bam ENCFF380ZHO https://www.encodeproject.org/files/ENCFF380ZHO/@@download/ENCFF380ZHO.bam 17.2 M 0 10.4 M 0.605 SE 36 36 native 0.0 M 7.4 M 6.2 M 0.360 0.90 0.92 13.57 95 5.48 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/3290ffbb-aa2e-4be1-b2fe-49039a89724b/@@download/cross_correlation_plot/ENCFF000NEQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQD richard-myers:SL244 ENCFF000NEQ Illumina Genome Analyzer IIx 2017-01-05T00:21:44.983425+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1ffx6j03696XBx58qK9vvQZ ENCSR000BHI https://www.encodeproject.org/experiments/ENCSR000BHI transcription factor POLR2A-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF960AWO https://www.encodeproject.org/files/ENCFF960AWO/@@download/ENCFF960AWO.bam ENCFF471JEL https://www.encodeproject.org/files/ENCFF471JEL/@@download/ENCFF471JEL.bam 61.5 M 0 22.3 M 0.363 SE 36 36 native 0.0 M 13.7 M 10.8 M 0.175 0.82 0.88 11.84 65 3.88 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b83a40d-57dc-42f6-8470-64937036c683/@@download/cross_correlation_plot/ENCFF000NEV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMO richard-myers:SL306 ENCFF000NEV Illumina Genome Analyzer IIx 2017-01-05T00:21:54.118624+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1ffxFj0369Bb91G8qB9zgBK ENCSR000BUC https://www.encodeproject.org/experiments/ENCSR000BUC transcription factor RAD21-human A549 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BQP https://www.encodeproject.org/experiments/ENCSR000BQP "transcription factor,chromatin remodeller" REST-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF807YWR https://www.encodeproject.org/files/ENCFF807YWR/@@download/ENCFF807YWR.bam ENCFF561WPG https://www.encodeproject.org/files/ENCFF561WPG/@@download/ENCFF561WPG.bam 47.2 M 0 36.6 M 0.775 SE 36 36 native 0.0 M 26.9 M 25.5 M 0.540 0.96 0.97 34.62 100 1.12 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/522744b5-979e-42fb-842e-5b21b38518ed/@@download/cross_correlation_plot/ENCFF000NDY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBO richard-myers:SL7110 ENCFF000NDY Illumina Genome Analyzer IIx 2016-12-11T03:21:57.100201+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1649QQ03697vfpg2qKbyZQp ENCSR000BQP https://www.encodeproject.org/experiments/ENCSR000BQP "transcription factor,chromatin remodeller" REST-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF653BQI https://www.encodeproject.org/files/ENCFF653BQI/@@download/ENCFF653BQI.bam ENCFF060SLW https://www.encodeproject.org/files/ENCFF060SLW/@@download/ENCFF060SLW.bam 37.4 M 0 33.4 M 0.894 SE 36 36 native 0.0 M 26.1 M 22.4 M 0.598 0.88 0.88 8.87 135 1.19 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/24fee85f-8c6a-4ac3-8775-5212a69d37fa/@@download/cross_correlation_plot/ENCFF000NDV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBN richard-myers:SL8075 ENCFF000NDV Illumina Genome Analyzer IIx 2016-12-11T03:16:12.536421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1649bQ0369BgG8x1ygv1X3j ENCSR000BRM https://www.encodeproject.org/experiments/ENCSR000BRM transcription factor SIN3A-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF973KMA https://www.encodeproject.org/files/ENCFF973KMA/@@download/ENCFF973KMA.bam ENCFF327YBD https://www.encodeproject.org/files/ENCFF327YBD/@@download/ENCFF327YBD.bam 45.8 M 0 39.1 M 0.853 SE 36 36 native 0.0 M 29.9 M 28.7 M 0.626 0.97 0.97 40.35 100 1.04 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/81c778b6-6ad2-42e8-a264-095b01c8fc28/@@download/cross_correlation_plot/ENCFF000NGY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTO richard-myers:SL7275 ENCFF000NGY Illumina Genome Analyzer IIx 2016-12-11T00:14:12.507614+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16397j036933PVVJ7Qq01Ff ENCSR000BRM https://www.encodeproject.org/experiments/ENCSR000BRM transcription factor SIN3A-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF805LGC https://www.encodeproject.org/files/ENCFF805LGC/@@download/ENCFF805LGC.bam ENCFF681HSI https://www.encodeproject.org/files/ENCFF681HSI/@@download/ENCFF681HSI.bam 44.2 M 0 39.6 M 0.895 SE 36 36 native 0.0 M 30.5 M 28.7 M 0.649 0.96 0.96 24.28 95 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d266adf-0730-4840-bad0-0dd1ed101b45/@@download/cross_correlation_plot/ENCFF000NHA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYA richard-myers:SL8401 ENCFF000NHA Illumina Genome Analyzer IIx 2016-12-11T00:14:49.976998+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1639GQ036933PVVJ7Qq01G2 ENCSR000BRL https://www.encodeproject.org/experiments/ENCSR000BRL transcription factor SIX5-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF089EEX https://www.encodeproject.org/files/ENCFF089EEX/@@download/ENCFF089EEX.bam ENCFF228VUS https://www.encodeproject.org/files/ENCFF228VUS/@@download/ENCFF228VUS.bam 45.0 M 0 34.6 M 0.769 SE 36 36 native 0.0 M 26.7 M 25.0 M 0.555 0.95 0.95 21.46 110 1.10 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/509a71f5-50af-4b84-a2c3-1cf5f085d7ed/@@download/cross_correlation_plot/ENCFF000NHI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTY richard-myers:SL7277 ENCFF000NHI Illumina Genome Analyzer IIx 2016-12-11T04:22:36.333071+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1659pQ03692BKq0F3V3jFbX ENCSR000BRL https://www.encodeproject.org/experiments/ENCSR000BRL transcription factor SIX5-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF842ISP https://www.encodeproject.org/files/ENCFF842ISP/@@download/ENCFF842ISP.bam ENCFF766RXA https://www.encodeproject.org/files/ENCFF766RXA/@@download/ENCFF766RXA.bam 34.8 M 0 32.1 M 0.922 SE 36 36 native 0.0 M 25.0 M 22.1 M 0.636 0.90 0.90 10.62 130 1.04 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/59758132-d7bd-48d6-909a-c407d33bd94e/@@download/cross_correlation_plot/ENCFF000NHG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTZ richard-myers:SL8400 ENCFF000NHG Illumina Genome Analyzer IIx 2016-12-11T04:14:28.370751+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1659zQ0369BJyPz9fb9qY9J ENCSR000BPE https://www.encodeproject.org/experiments/ENCSR000BPE transcription factor SP1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF415SIE https://www.encodeproject.org/files/ENCFF415SIE/@@download/ENCFF415SIE.bam ENCFF498BNK https://www.encodeproject.org/files/ENCFF498BNK/@@download/ENCFF498BNK.bam 40.6 M 0 34.7 M 0.853 SE 36 36 native 0.0 M 25.9 M 23.8 M 0.585 0.92 0.92 13.94 150 1.33 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e2d5a2d-f3ae-40cd-bf1e-10e451a08bde/@@download/cross_correlation_plot/ENCFF000NHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHU richard-myers:SL5360 ENCFF000NHM Illumina Genome Analyzer IIx 2016-12-10T20:38:09.973699+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Z2j03698ZxQY8q63X7xb ENCSR000BPE https://www.encodeproject.org/experiments/ENCSR000BPE transcription factor SP1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF916AFL https://www.encodeproject.org/files/ENCFF916AFL/@@download/ENCFF916AFL.bam ENCFF659LAW https://www.encodeproject.org/files/ENCFF659LAW/@@download/ENCFF659LAW.bam 52.0 M 0 43.2 M 0.830 SE 36 36 native 0.0 M 33.2 M 31.5 M 0.605 0.96 0.96 27.56 140 1.22 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/15d307bf-c181-4196-b967-a7e726554338/@@download/cross_correlation_plot/ENCFF000NHP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHV richard-myers:SL5701 ENCFF000NHP Illumina Genome Analyzer IIx 2016-12-10T20:57:54.703503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Z7j03697K4B1J71pxzX6 ENCSR000BPF https://www.encodeproject.org/experiments/ENCSR000BPF transcription factor TAF1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF887OBL https://www.encodeproject.org/files/ENCFF887OBL/@@download/ENCFF887OBL.bam ENCFF573ZKI https://www.encodeproject.org/files/ENCFF573ZKI/@@download/ENCFF573ZKI.bam 38.4 M 0 32.1 M 0.836 SE 36 36 native 0.0 M 23.8 M 20.8 M 0.542 0.88 0.88 8.17 180 1.13 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ee97675-e64f-46bd-9e6a-9ef781db51d7/@@download/cross_correlation_plot/ENCFF000NHV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCD richard-myers:SL5358 ENCFF000NHV Illumina Genome Analyzer IIx 2016-12-10T20:45:03.562552+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162b580369B6ZyvJ8yKQX9K ENCSR000BPF https://www.encodeproject.org/experiments/ENCSR000BPF transcription factor TAF1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF313TEK https://www.encodeproject.org/files/ENCFF313TEK/@@download/ENCFF313TEK.bam ENCFF934YHX https://www.encodeproject.org/files/ENCFF934YHX/@@download/ENCFF934YHX.bam 47.9 M 0 32.0 M 0.668 SE 36 36 native 0.0 M 22.5 M 20.6 M 0.430 0.93 0.93 15.30 80 1.03 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/c67f6a4c-ffbb-4af6-b777-6eafeb7e22ac/@@download/cross_correlation_plot/ENCFF000NHY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCE richard-myers:SL5700 ENCFF000NHY Illumina Genome Analyzer IIx 2016-12-10T20:57:52.633979+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162bF003697k5jKB6pJ7qgF ENCSR000BQQ https://www.encodeproject.org/experiments/ENCSR000BQQ transcription factor TCF12-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF264CUG https://www.encodeproject.org/files/ENCFF264CUG/@@download/ENCFF264CUG.bam ENCFF823IFJ https://www.encodeproject.org/files/ENCFF823IFJ/@@download/ENCFF823IFJ.bam 33.5 M 0 27.6 M 0.825 SE 36 36 native 0.0 M 21.4 M 20.0 M 0.596 0.94 0.95 19.94 110 1.06 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/f46b9e6e-dbcc-4f4c-aa3c-a9009703bc0f/@@download/cross_correlation_plot/ENCFF000NID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEW richard-myers:SL7114 ENCFF000NID Illumina Genome Analyzer IIx 2016-12-11T00:07:25.626159+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163QQ003699Z3Y8493qbpvZ ENCSR000BQQ https://www.encodeproject.org/experiments/ENCSR000BQQ transcription factor TCF12-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF723RMN https://www.encodeproject.org/files/ENCFF723RMN/@@download/ENCFF723RMN.bam ENCFF097IFB https://www.encodeproject.org/files/ENCFF097IFB/@@download/ENCFF097IFB.bam 35.8 M 0 32.0 M 0.893 SE 36 36 native 0.0 M 24.7 M 20.9 M 0.583 0.87 0.87 7.79 175 1.40 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c827313-ef7b-415a-954d-7c036b7aae32/@@download/cross_correlation_plot/ENCFF000NIG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEV richard-myers:SL8076 ENCFF000NIG Illumina Genome Analyzer IIx 2016-12-11T00:28:03.375960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163QZj03695zJkyP3F892Jy ENCSR000BUD https://www.encodeproject.org/experiments/ENCSR000BUD transcription factor TEAD4-human A549 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BHX https://www.encodeproject.org/experiments/ENCSR000BHX transcription factor USF1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF129ZOT https://www.encodeproject.org/files/ENCFF129ZOT/@@download/ENCFF129ZOT.bam ENCFF719DRG https://www.encodeproject.org/files/ENCFF719DRG/@@download/ENCFF719DRG.bam 41.8 M 0 24.4 M 0.584 SE 36 36 native 0.0 M 18.5 M 16.1 M 0.385 0.87 0.88 8.13 135 1.28 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0849944-c84d-440e-8c43-e280b4f87fab/@@download/cross_correlation_plot/ENCFF000NIT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWU richard-myers:SL1079 ENCFF000NIT Illumina Genome Analyzer IIx 2016-12-11T04:54:03.018420+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1661pj0369KbxV61z4GFvp0 ENCSR000BHX https://www.encodeproject.org/experiments/ENCSR000BHX transcription factor USF1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF626ZDC https://www.encodeproject.org/files/ENCFF626ZDC/@@download/ENCFF626ZDC.bam ENCFF860TXL https://www.encodeproject.org/files/ENCFF860TXL/@@download/ENCFF860TXL.bam 16.0 M 0 13.6 M 0.849 SE 36 36 native 0.0 M 10.5 M 8.6 M 0.538 0.82 0.82 5.45 120 1.41 2.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d775acf-2984-4b6d-adc4-b8ac0c741e37/@@download/cross_correlation_plot/ENCFF000NIR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSH richard-myers:SL1206 ENCFF000NIR Illumina Genome Analyzer IIx 2016-12-11T04:41:26.488028+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1661zj03693JQ1ZJ95zxXVb ENCSR000BJB https://www.encodeproject.org/experiments/ENCSR000BJB transcription factor USF1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF968GUI https://www.encodeproject.org/files/ENCFF968GUI/@@download/ENCFF968GUI.bam ENCFF887SAJ https://www.encodeproject.org/files/ENCFF887SAJ/@@download/ENCFF887SAJ.bam 22.8 M 0 17.9 M 0.783 SE 36 36 native 0.0 M 13.4 M 12.7 M 0.558 0.95 0.95 23.20 140 1.34 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/18f0511b-9fa8-41c8-9bdc-69a41d0b487d/@@download/cross_correlation_plot/ENCFF000NJE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQC richard-myers:SL1080 ENCFF000NJE Illumina Genome Analyzer IIx 2016-12-11T04:55:16.653261+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166BVQ03695zJkyP3F892Y7 ENCSR000BJB https://www.encodeproject.org/experiments/ENCSR000BJB transcription factor USF1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF125HKY https://www.encodeproject.org/files/ENCFF125HKY/@@download/ENCFF125HKY.bam ENCFF911EOW https://www.encodeproject.org/files/ENCFF911EOW/@@download/ENCFF911EOW.bam 18.0 M 0 14.6 M 0.810 SE 36 36 native 0.0 M 11.1 M 9.3 M 0.520 0.84 0.85 6.59 115 1.68 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ca819b3-c06e-46b8-ba1f-7ad489ab38a5/@@download/cross_correlation_plot/ENCFF000NJA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQY richard-myers:SL1207 ENCFF000NJA Illumina Genome Analyzer IIx 2016-12-11T04:51:05.622530+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Bg803696z7JqGk4YzyFQ ENCSR000BPV https://www.encodeproject.org/experiments/ENCSR000BPV transcription factor USF1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF017CKG https://www.encodeproject.org/files/ENCFF017CKG/@@download/ENCFF017CKG.bam ENCFF456RPU https://www.encodeproject.org/files/ENCFF456RPU/@@download/ENCFF456RPU.bam 46.9 M 0 36.3 M 0.773 SE 36 36 native 0.0 M 23.5 M 22.7 M 0.483 0.97 0.98 44.14 115 1.10 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d3822db-82b0-47c7-b553-c972c594f122/@@download/cross_correlation_plot/ENCFF000NJL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAZ richard-myers:SL6593 ENCFF000NJL Illumina Genome Analyzer IIx 2016-12-11T04:51:11.769986+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165qjj0369KbxV61z4GFvjK ENCSR000BPV https://www.encodeproject.org/experiments/ENCSR000BPV transcription factor USF1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF213ZOP https://www.encodeproject.org/files/ENCFF213ZOP/@@download/ENCFF213ZOP.bam ENCFF177UPX https://www.encodeproject.org/files/ENCFF177UPX/@@download/ENCFF177UPX.bam 44.6 M 0 35.5 M 0.797 SE 36 36 native 0.0 M 27.2 M 25.6 M 0.575 0.95 0.96 22.74 125 1.06 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/afe39b15-d12b-4aa5-879b-928ea060cbde/@@download/cross_correlation_plot/ENCFF000NJM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRR richard-myers:SL7279 ENCFF000NJM Illumina Genome Analyzer IIx 2016-12-11T04:51:40.160827+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165qy803690xXYVJ7Fj2f8B ENCSR000BPM https://www.encodeproject.org/experiments/ENCSR000BPM transcription factor YY1-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF576DWG https://www.encodeproject.org/files/ENCFF576DWG/@@download/ENCFF576DWG.bam ENCFF721NZQ https://www.encodeproject.org/files/ENCFF721NZQ/@@download/ENCFF721NZQ.bam 54.2 M 0 38.1 M 0.702 SE 36 36 native 0.0 M 25.9 M 22.7 M 0.418 0.88 0.89 9.77 130 1.24 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e393286-71e8-4772-9549-b752949d3808/@@download/cross_correlation_plot/ENCFF000NJS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQI richard-myers:SL5357 ENCFF000NJS Illumina Genome Analyzer IIx 2016-12-11T02:49:16.145717+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163j1j036969X0jJ6p3ffgZ ENCSR000BPM https://www.encodeproject.org/experiments/ENCSR000BPM transcription factor YY1-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF190FDQ https://www.encodeproject.org/files/ENCFF190FDQ/@@download/ENCFF190FDQ.bam ENCFF520AQZ https://www.encodeproject.org/files/ENCFF520AQZ/@@download/ENCFF520AQZ.bam 42.9 M 0 29.0 M 0.676 SE 36 36 native 0.0 M 20.3 M 18.1 M 0.421 0.92 0.92 13.09 100 1.08 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdb72563-afdb-426c-b9d2-292c71e5af5c/@@download/cross_correlation_plot/ENCFF000NJU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQH richard-myers:SL5699 ENCFF000NJU Illumina Genome Analyzer IIx 2016-12-11T02:36:30.746080+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163j6j0369Bxb30J6x5bZ8P ENCSR000BPZ https://www.encodeproject.org/experiments/ENCSR000BPZ transcription factor ZBTB33-human A549 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF637ZXE https://www.encodeproject.org/files/ENCFF637ZXE/@@download/ENCFF637ZXE.bam ENCFF617FVJ https://www.encodeproject.org/files/ENCFF617FVJ/@@download/ENCFF617FVJ.bam 45.1 M 0 37.6 M 0.836 SE 36 36 native 0.0 M 27.1 M 25.8 M 0.573 0.96 0.97 29.51 90 1.05 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/d08d812c-2c95-4d74-91ea-80a5ff087e66/@@download/cross_correlation_plot/ENCFF000NKG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXP richard-myers:SL6016 ENCFF000NKG Illumina Genome Analyzer IIx 2016-12-11T03:16:17.182348+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1646xj03696z7JqGk4Yzy74 ENCSR000BPZ https://www.encodeproject.org/experiments/ENCSR000BPZ transcription factor ZBTB33-human A549 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF774ZQG https://www.encodeproject.org/files/ENCFF774ZQG/@@download/ENCFF774ZQG.bam ENCFF090UNH https://www.encodeproject.org/files/ENCFF090UNH/@@download/ENCFF090UNH.bam 43.2 M 0 36.6 M 0.847 SE 36 36 native 0.0 M 25.9 M 24.5 M 0.568 0.96 0.96 25.02 115 1.07 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/0bc6bf39-450b-40b0-90b3-f717c4dec0c0/@@download/cross_correlation_plot/ENCFF000NKB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFP richard-myers:SL6592 ENCFF000NKB Illumina Genome Analyzer IIx 2016-12-11T03:15:20.405730+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16472Q03697K4B1J71py002 ENCSR138PGW https://www.encodeproject.org/experiments/ENCSR138PGW control Control-human bipolar neuron in vitro differentiated cells 1 richard-myers ENCODE3 GRCh38 ENCFF802YSD https://www.encodeproject.org/files/ENCFF802YSD/@@download/ENCFF802YSD.bam ENCFF254WCJ https://www.encodeproject.org/files/ENCFF254WCJ/@@download/ENCFF254WCJ.bam 25.5 M 0 24.6 M 0.964 SE 50 50 native 0.0 M 20.7 M 20.2 M 0.793 0.98 0.98 57.93 80 1.03 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/97cd9b8b-142b-4684-b286-38d7da2cc2b7/@@download/cross_correlation_plot/ENCFF963TEZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB077ELA richard-myers:SL127693 ENCFF963TEZ HiSeq 2000 2016-09-19T22:52:45.414582+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ37P803699BF1b8xqJBqkY ENCSR170WVI https://www.encodeproject.org/experiments/ENCSR170WVI control Control-human bipolar neuron in vitro differentiated cells 1 richard-myers ENCODE3 GRCh38 ENCFF389HKQ https://www.encodeproject.org/files/ENCFF389HKQ/@@download/ENCFF389HKQ.bam ENCFF981TAN https://www.encodeproject.org/files/ENCFF981TAN/@@download/ENCFF981TAN.bam 25.6 M 0 24.9 M 0.973 SE 50 50 native 0.0 M 21.3 M 20.8 M 0.813 0.99 0.99 67.62 80 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d371a16-88e6-4649-b57e-3402f48f3245/@@download/cross_correlation_plot/ENCFF564XPO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB313GBV richard-myers:SL127692 ENCFF564XPO HiSeq 2000 2016-09-19T22:51:46.501282+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ37X803698j0j081y1kvYy ENCSR619IUE https://www.encodeproject.org/experiments/ENCSR619IUE "transcription factor,RNA binding protein" CTCF-human bipolar neuron in vitro differentiated cells 1 richard-myers ENCODE3 GRCh38 ENCFF761LNM https://www.encodeproject.org/files/ENCFF761LNM/@@download/ENCFF761LNM.bam ENCFF225QQB https://www.encodeproject.org/files/ENCFF225QQB/@@download/ENCFF225QQB.bam 31.7 M 0 29.5 M 0.930 SE 50 50 native 0.0 M 26.1 M 20.6 M 0.649 0.80 0.88 13.72 90 3.32 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4c519ee-b346-41cf-a966-73ecbd42566f/@@download/cross_correlation_plot/ENCFF638ZSQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB596GLA richard-myers:SL127677 ENCFF638ZSQ HiSeq 2000 2016-09-19T22:51:24.452631+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ387003691KBYfPby3VyQV ENCSR619IUE https://www.encodeproject.org/experiments/ENCSR619IUE "transcription factor,RNA binding protein" CTCF-human bipolar neuron in vitro differentiated cells 2 richard-myers ENCODE3 GRCh38 ENCFF302HOU https://www.encodeproject.org/files/ENCFF302HOU/@@download/ENCFF302HOU.bam ENCFF719YYF https://www.encodeproject.org/files/ENCFF719YYF/@@download/ENCFF719YYF.bam 49.2 M 0 26.6 M 0.541 SE 50 50 native 0.0 M 20.8 M 14.9 M 0.303 0.74 0.84 9.55 110 4.99 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/2465eb65-fc88-4073-ad85-c3e9ea5ca045/@@download/cross_correlation_plot/ENCFF082XMZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB041MNB richard-myers:SL127685 ENCFF082XMZ HiSeq 2000 2016-09-19T22:51:59.894578+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ38B00369P2gG479y0q3Yz ENCSR889GGV https://www.encodeproject.org/experiments/ENCSR889GGV "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human bipolar neuron in vitro differentiated cells 1 richard-myers ENCODE3 GRCh38 ENCFF596BCZ https://www.encodeproject.org/files/ENCFF596BCZ/@@download/ENCFF596BCZ.bam ENCFF448PLJ https://www.encodeproject.org/files/ENCFF448PLJ/@@download/ENCFF448PLJ.bam 31.5 M 0 29.5 M 0.936 SE 50 50 native 0.0 M 25.3 M 24.4 M 0.773 0.97 0.97 36.49 90 1.34 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/129f2035-595f-4314-accc-96f8cb3dfd83/@@download/cross_correlation_plot/ENCFF557MVE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB200SJT richard-myers:SL127676 ENCFF557MVE HiSeq 2000 2016-09-19T22:51:09.234159+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ38J80369BkxgJGxy7y1xf ENCSR889GGV https://www.encodeproject.org/experiments/ENCSR889GGV "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human bipolar neuron in vitro differentiated cells 2 richard-myers ENCODE3 GRCh38 ENCFF091YVC https://www.encodeproject.org/files/ENCFF091YVC/@@download/ENCFF091YVC.bam ENCFF912DCK https://www.encodeproject.org/files/ENCFF912DCK/@@download/ENCFF912DCK.bam 34.1 M 0 32.2 M 0.944 SE 50 50 native 0.0 M 27.8 M 26.1 M 0.766 0.95 0.95 25.54 90 1.51 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/07bf7753-acfe-47a9-9840-fc57eeeeda0b/@@download/cross_correlation_plot/ENCFF450YAP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB710IDL richard-myers:SL127684 ENCFF450YAP HiSeq 2000 2016-09-19T22:51:38.553098+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ38Q80369BkxgJGxy7y1y2 ENCSR362VCG https://www.encodeproject.org/experiments/ENCSR362VCG "RNA binding protein,transcription factor" POU5F1-human bipolar neuron in vitro differentiated cells 1 richard-myers ENCODE3 GRCh38 ENCFF208HMD https://www.encodeproject.org/files/ENCFF208HMD/@@download/ENCFF208HMD.bam ENCFF301QUO https://www.encodeproject.org/files/ENCFF301QUO/@@download/ENCFF301QUO.bam 59.8 M 0 44.4 M 0.742 SE 50 50 native 0.0 M 37.1 M 35.7 M 0.597 0.97 0.97 29.58 80 1.05 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/846b40a4-2b1e-49ea-afa9-c0f2b88c0eb2/@@download/cross_correlation_plot/ENCFF476HJC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB416DJZ richard-myers:SL127690 ENCFF476HJC HiSeq 2000 2016-09-19T22:47:59.078412+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ38xQ03695vJzF7xZ4vg4x ENCSR839SFJ https://www.encodeproject.org/experiments/ENCSR839SFJ transcription factor SMARCA4-human bipolar neuron in vitro differentiated cells 1 richard-myers ENCODE3 GRCh38 ENCFF028MMF https://www.encodeproject.org/files/ENCFF028MMF/@@download/ENCFF028MMF.bam ENCFF953GGK https://www.encodeproject.org/files/ENCFF953GGK/@@download/ENCFF953GGK.bam 23.8 M 0 22.1 M 0.929 SE 50 50 native 0.0 M 19.1 M 18.7 M 0.785 0.98 0.98 54.18 100 1.17 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/c418d3f3-c6f7-4584-9bc2-e1ae46c6db66/@@download/cross_correlation_plot/ENCFF291CUA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB277AMA richard-myers:SL127681 ENCFF291CUA HiSeq 2000 2016-09-19T22:51:20.174792+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ380Q0369FpBzZ95yBXXzB ENCSR839SFJ https://www.encodeproject.org/experiments/ENCSR839SFJ transcription factor SMARCA4-human bipolar neuron in vitro differentiated cells 2 richard-myers ENCODE3 GRCh38 ENCFF198OIE https://www.encodeproject.org/files/ENCFF198OIE/@@download/ENCFF198OIE.bam ENCFF491KWW https://www.encodeproject.org/files/ENCFF491KWW/@@download/ENCFF491KWW.bam 66.9 M 0 61.3 M 0.916 SE 50 50 native 0.0 M 53.2 M 50.5 M 0.754 0.95 0.96 25.83 100 1.23 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/7936dcdd-9962-423d-91b5-0066f1b3f9ed/@@download/cross_correlation_plot/ENCFF131MJT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB505QRO richard-myers:SL127689 ENCFF131MJT HiSeq 2000 2016-09-19T22:53:22.914958+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ383Q03698j0j081y1kvb1 ENCSR226SNN https://www.encodeproject.org/experiments/ENCSR226SNN control Control-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF491FCG https://www.encodeproject.org/files/ENCFF491FCG/@@download/ENCFF491FCG.bam ENCFF096ZLV https://www.encodeproject.org/files/ENCFF096ZLV/@@download/ENCFF096ZLV.bam 124.5 M 0 105.1 M 0.845 PE 76 76 native 41.6 M 0.0 M 40.0 M 0.642 0.96 0.96 25.37 305 1.01 0.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/4dc02b00-83f1-4d8a-92b8-30741a1f26c9/@@download/cross_correlation_plot/ENCFF803CYDENCFF180WPD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB185UXE richard-myers:SL161588 "ENCFF180WPD,ENCFF803CYD" HiSeq 2000 2017-02-02T05:34:07.773199+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292bP8036951p1PJ64F8fQX ENCSR237CQV https://www.encodeproject.org/experiments/ENCSR237CQV control Control-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF729OTP https://www.encodeproject.org/files/ENCFF729OTP/@@download/ENCFF729OTP.bam ENCFF909WVL https://www.encodeproject.org/files/ENCFF909WVL/@@download/ENCFF909WVL.bam 121.5 M 0 102.1 M 0.840 PE 76 76 native 40.5 M 0.0 M 39.3 M 0.647 0.97 0.97 34.81 310 1.01 0.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/90959659-5f12-454d-b1ef-773449513d49/@@download/cross_correlation_plot/ENCFF094LCIENCFF818HXE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB409RMK richard-myers:SL161591 "ENCFF818HXE,ENCFF094LCI" HiSeq 2000 2017-02-02T03:33:41.812537+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292JGQ03692Gpj6FPk3vB28 ENCSR621IYT https://www.encodeproject.org/experiments/ENCSR621IYT control Control-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF485SVR https://www.encodeproject.org/files/ENCFF485SVR/@@download/ENCFF485SVR.bam ENCFF505FXU https://www.encodeproject.org/files/ENCFF505FXU/@@download/ENCFF505FXU.bam 122.0 M 0 99.6 M 0.816 PE 76 76 native 39.0 M 0.0 M 38.1 M 0.624 0.98 0.98 42.73 290 1.01 0.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f9e469c-b45f-4b2f-9362-1c8813510ef0/@@download/cross_correlation_plot/ENCFF698GODENCFF051ZTX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB760RGU richard-myers:SL161589 "ENCFF698GOD,ENCFF051ZTX" HiSeq 2000 2017-02-02T03:57:14.587869+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292xV8036951p1PJ64F8ffv ENCSR728WVG https://www.encodeproject.org/experiments/ENCSR728WVG control Control-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF999KUP https://www.encodeproject.org/files/ENCFF999KUP/@@download/ENCFF999KUP.bam ENCFF382RBD https://www.encodeproject.org/files/ENCFF382RBD/@@download/ENCFF382RBD.bam 109.3 M 0 93.3 M 0.853 PE 76 76 native 36.8 M 0.0 M 36.0 M 0.658 0.98 0.98 41.76 310 1.01 0.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/748c898e-5776-45cd-8444-717aaa5dea3e/@@download/cross_correlation_plot/ENCFF732JFNENCFF589EEX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285BDM richard-myers:SL161592 "ENCFF732JFN,ENCFF589EEX" HiSeq 2000 2017-02-02T02:53:14.905203+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292J2003692Gpj6FPk3vB1p ENCSR774ONS https://www.encodeproject.org/experiments/ENCSR774ONS control Control-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF727MPI https://www.encodeproject.org/files/ENCFF727MPI/@@download/ENCFF727MPI.bam ENCFF524YZU https://www.encodeproject.org/files/ENCFF524YZU/@@download/ENCFF524YZU.bam 77.1 M 0 69.6 M 0.903 PE 76 76 native 27.7 M 0.0 M 26.6 M 0.691 0.96 0.96 25.60 100 1.07 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/d3f50331-0a4e-4f8c-8071-b8b24696f330/@@download/cross_correlation_plot/ENCFF015QBJENCFF062WKC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB750JWV richard-myers:SL161590 "ENCFF015QBJ,ENCFF062WKC" HiSeq 2000 2017-02-02T01:24:18.248212+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292vkj0369BpyVQJ710fvkF ENCSR869JUM https://www.encodeproject.org/experiments/ENCSR869JUM control Control-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF434APV https://www.encodeproject.org/files/ENCFF434APV/@@download/ENCFF434APV.bam ENCFF461QPO https://www.encodeproject.org/files/ENCFF461QPO/@@download/ENCFF461QPO.bam 133.1 M 0 109.1 M 0.820 PE 76 76 native 42.7 M 0.0 M 41.4 M 0.621 0.97 0.97 33.60 260 1.01 0.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/962d0506-7c8b-4cf7-89a1-3b82eebf7ebe/@@download/cross_correlation_plot/ENCFF088HMZENCFF722QTP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB657GAR richard-myers:SL161586 "ENCFF722QTP,ENCFF088HMZ" HiSeq 2000 2017-02-02T04:49:28.677914+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F29349803693jxfkJ697fv2Y ENCSR951JUP https://www.encodeproject.org/experiments/ENCSR951JUP control Control-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF943XRD https://www.encodeproject.org/files/ENCFF943XRD/@@download/ENCFF943XRD.bam ENCFF669RNN https://www.encodeproject.org/files/ENCFF669RNN/@@download/ENCFF669RNN.bam 116.4 M 0 98.3 M 0.844 PE 76 76 native 38.6 M 0.0 M 37.2 M 0.638 0.96 0.96 26.14 265 1.01 0.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/11dc09af-206f-4ce8-be0c-9ab1d118a1bc/@@download/cross_correlation_plot/ENCFF007ATEENCFF629EIQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB236YEJ richard-myers:SL161593 "ENCFF007ATE,ENCFF629EIQ" HiSeq 2000 2017-02-02T03:57:15.683994+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293F8Q03693q2BXJ6Zx9Y0B ENCSR346DKN https://www.encodeproject.org/experiments/ENCSR346DKN transcription factor EP300-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF181CGW https://www.encodeproject.org/files/ENCFF181CGW/@@download/ENCFF181CGW.bam ENCFF545ZJY https://www.encodeproject.org/files/ENCFF545ZJY/@@download/ENCFF545ZJY.bam 65.9 M 0 58.9 M 0.893 PE 76 76 native 23.2 M 0.0 M 20.2 M 0.614 0.87 0.87 7.73 185 1.14 2.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d8fb9e0-cae9-40bf-89ca-b24a99bd403e/@@download/cross_correlation_plot/ENCFF943IGOENCFF283GGY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB712WWN richard-myers:SL161576 "ENCFF283GGY,ENCFF943IGO" HiSeq 2000 2017-02-02T01:05:19.345093+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292QKj0369F13JyFQ4qQbyY ENCSR432OIW https://www.encodeproject.org/experiments/ENCSR432OIW transcription factor EP300-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF369KMY https://www.encodeproject.org/files/ENCFF369KMY/@@download/ENCFF369KMY.bam ENCFF592ZLX https://www.encodeproject.org/files/ENCFF592ZLX/@@download/ENCFF592ZLX.bam 77.7 M 0 71.7 M 0.922 PE 76 76 native 28.8 M 0.0 M 27.6 M 0.709 0.96 0.95 22.00 140 1.13 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae53f89d-43cf-4714-9ff6-2b4974d8e80a/@@download/cross_correlation_plot/ENCFF271TKPENCFF312JMJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB649XZL richard-myers:SL161578 "ENCFF271TKP,ENCFF312JMJ" HiSeq 2000 2017-02-02T01:40:01.788532+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292gXj03698K796J5yq8QPb ENCSR501LEH https://www.encodeproject.org/experiments/ENCSR501LEH transcription factor EP300-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF647USM https://www.encodeproject.org/files/ENCFF647USM/@@download/ENCFF647USM.bam ENCFF940CLF https://www.encodeproject.org/files/ENCFF940CLF/@@download/ENCFF940CLF.bam 93.2 M 0 86.0 M 0.923 PE 76 76 native 34.2 M 0.0 M 30.7 M 0.658 0.90 0.90 9.52 160 1.07 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a8d9d8c-439e-4944-83d6-2ffc331f7e61/@@download/cross_correlation_plot/ENCFF956IEAENCFF836HTT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB101GUR richard-myers:SL161574 "ENCFF956IEA,ENCFF836HTT" HiSeq 2000 2017-02-02T02:48:07.445157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2931Kj03695y6gFJ6jy81X4 ENCSR528UBJ https://www.encodeproject.org/experiments/ENCSR528UBJ transcription factor EP300-human breast epithelium tissue 1 richard-myers ENCODE3 GRCh38 ENCFF533BQE https://www.encodeproject.org/files/ENCFF533BQE/@@download/ENCFF533BQE.bam ENCFF778SOD https://www.encodeproject.org/files/ENCFF778SOD/@@download/ENCFF778SOD.bam 89.2 M 0 81.8 M 0.917 PE 76 76 native 32.9 M 0.0 M 31.4 M 0.703 0.95 0.95 21.16 120 1.07 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/43d34938-9a15-43c9-845e-7e417277f887/@@download/cross_correlation_plot/ENCFF175RYKENCFF287TQD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB188XVH richard-myers:SL161572 "ENCFF287TQD,ENCFF175RYK" HiSeq 2000 2017-02-02T02:41:20.871971+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292kG80369BpyVQJ710fvbK ENCSR000BOB https://www.encodeproject.org/experiments/ENCSR000BOB control Control-human endothelial cell of umbilical vein primary cell 1 richard-myers ENCODE2 GRCh38 ENCFF166HHP https://www.encodeproject.org/files/ENCFF166HHP/@@download/ENCFF166HHP.bam ENCFF943DFZ https://www.encodeproject.org/files/ENCFF943DFZ/@@download/ENCFF943DFZ.bam 20.1 M 0 17.3 M 0.862 SE 36 36 native 0.0 M 12.9 M 12.6 M 0.630 0.98 0.98 51.36 130 1.03 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a30dd14-ca15-4084-8a3f-c79bc1619da2/@@download/cross_correlation_plot/ENCFF000PVT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOL richard-myers:SL1106 ENCFF000PVT Illumina Genome Analyzer IIx 2017-06-16T19:41:16.167244+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5220g003697p93bFxvBJYFp ENCSR000BQB https://www.encodeproject.org/experiments/ENCSR000BQB transcription factor POLR2A-human endothelial cell of umbilical vein primary cell 1 richard-myers ENCODE2 GRCh38 ENCFF896AXB https://www.encodeproject.org/files/ENCFF896AXB/@@download/ENCFF896AXB.bam ENCFF692VEL https://www.encodeproject.org/files/ENCFF692VEL/@@download/ENCFF692VEL.bam 18.3 M 0 15.2 M 0.830 SE 36 36 native 0.0 M 11.7 M 10.1 M 0.548 0.86 0.86 6.78 120 1.46 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ee8deca-1bbf-4999-9393-e16d13ed9a30/@@download/cross_correlation_plot/ENCFF000PVK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JAT richard-myers:SL1103 ENCFF000PVK Illumina Genome Analyzer IIx 2016-12-11T03:37:10.229804+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164pBQ0369KbxV61z4GFvK8 ENCSR000BQB https://www.encodeproject.org/experiments/ENCSR000BQB transcription factor POLR2A-human endothelial cell of umbilical vein primary cell 2 richard-myers ENCODE2 GRCh38 ENCFF571VGS https://www.encodeproject.org/files/ENCFF571VGS/@@download/ENCFF571VGS.bam ENCFF224KDN https://www.encodeproject.org/files/ENCFF224KDN/@@download/ENCFF224KDN.bam 43.6 M 0 38.8 M 0.890 SE 36 36 native 0.0 M 30.2 M 27.9 M 0.641 0.94 0.94 16.27 145 1.14 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e317f83-8b2a-41ab-9f69-de52963e1382/@@download/cross_correlation_plot/ENCFF000PVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JAU richard-myers:SL6966 ENCFF000PVP Illumina Genome Analyzer IIx 2016-12-11T04:03:30.129189+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164pP003697K4B1J71py020 ENCSR000BQC https://www.encodeproject.org/experiments/ENCSR000BQC "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human endothelial cell of umbilical vein primary cell 1 richard-myers ENCODE2 GRCh38 ENCFF727LFV https://www.encodeproject.org/files/ENCFF727LFV/@@download/ENCFF727LFV.bam ENCFF500PRD https://www.encodeproject.org/files/ENCFF500PRD/@@download/ENCFF500PRD.bam 17.9 M 0 15.4 M 0.862 SE 36 36 native 0.0 M 12.1 M 11.0 M 0.615 0.91 0.91 10.60 140 1.45 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1aea810-e157-4675-9fb3-3d62c702cc7a/@@download/cross_correlation_plot/ENCFF000PVD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDR richard-myers:SL1104 ENCFF000PVD Illumina Genome Analyzer IIx 2016-12-11T03:09:26.642763+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164KgQ03695Kj1j8qPQgkb7 ENCSR000BQC https://www.encodeproject.org/experiments/ENCSR000BQC "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human endothelial cell of umbilical vein primary cell 2 richard-myers ENCODE2 GRCh38 ENCFF022RML https://www.encodeproject.org/files/ENCFF022RML/@@download/ENCFF022RML.bam ENCFF930MZF https://www.encodeproject.org/files/ENCFF930MZF/@@download/ENCFF930MZF.bam 17.9 M 0 11.8 M 0.661 SE 36 36 native 0.0 M 9.4 M 5.6 M 0.311 0.59 0.56 2.03 135 2.39 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/1fce5879-1d43-4012-beda-aed3a5f29817/@@download/cross_correlation_plot/ENCFF000PVB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDS richard-myers:SL2387 ENCFF000PVB Illumina Genome Analyzer IIx 2016-12-11T03:01:57.046334+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Kv803692yykb1zBpz7bZ ENCSR014XSP https://www.encodeproject.org/experiments/ENCSR014XSP control Control-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF280UZG https://www.encodeproject.org/files/ENCFF280UZG/@@download/ENCFF280UZG.bam ENCFF910ROP https://www.encodeproject.org/files/ENCFF910ROP/@@download/ENCFF910ROP.bam 120.2 M 0 101.7 M 0.846 PE 76 76 native 40.7 M 0.0 M 39.8 M 0.662 0.98 0.98 55.18 305 1.01 0.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/dbc6d6e1-35ad-4de3-81dd-f512f8396980/@@download/cross_correlation_plot/ENCFF963KVXENCFF320JDA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB291GKH richard-myers:SL161361 "ENCFF963KVX,ENCFF320JDA" HiSeq 2000 2017-02-02T03:47:34.548112+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292y6Q0369BvG3VJ5qF224q ENCSR089MPD https://www.encodeproject.org/experiments/ENCSR089MPD control Control-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF858COI https://www.encodeproject.org/files/ENCFF858COI/@@download/ENCFF858COI.bam ENCFF644VPY https://www.encodeproject.org/files/ENCFF644VPY/@@download/ENCFF644VPY.bam 106.0 M 0 92.7 M 0.874 PE 76 76 native 37.5 M 0.0 M 37.0 M 0.698 0.99 0.99 96.32 295 1.01 0.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/7bd35e83-c07c-4fff-bd57-774cc4dc96cc/@@download/cross_correlation_plot/ENCFF269BTXENCFF605FUW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB712ECY richard-myers:SL161373 "ENCFF269BTX,ENCFF605FUW" HiSeq 2000 2017-02-02T03:37:03.808078+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2936B003698K796J5yq8QjK ENCSR240SYZ https://www.encodeproject.org/experiments/ENCSR240SYZ control Control-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF518UMI https://www.encodeproject.org/files/ENCFF518UMI/@@download/ENCFF518UMI.bam ENCFF406GRT https://www.encodeproject.org/files/ENCFF406GRT/@@download/ENCFF406GRT.bam 142.3 M 0 121.6 M 0.855 PE 76 76 native 49.7 M 0.0 M 47.5 M 0.668 0.96 0.96 27.35 95 1.08 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a0e523a-8b1c-4811-995c-70e5006e0c06/@@download/cross_correlation_plot/ENCFF339GDOENCFF997CZF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB216EPB richard-myers:SL161356 "ENCFF997CZF,ENCFF339GDO" HiSeq 2000 2017-02-02T06:05:31.877768+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293GZ003693q2BXJ6Zx9Y18 ENCSR249UPE https://www.encodeproject.org/experiments/ENCSR249UPE control Control-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF290PIB https://www.encodeproject.org/files/ENCFF290PIB/@@download/ENCFF290PIB.bam ENCFF283HXT https://www.encodeproject.org/files/ENCFF283HXT/@@download/ENCFF283HXT.bam 150.0 M 0 126.0 M 0.840 PE 76 76 native 50.5 M 0.0 M 49.1 M 0.655 0.98 0.98 47.64 270 1.01 0.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/86e6a709-570e-40c5-8bf8-032d5c548a6e/@@download/cross_correlation_plot/ENCFF598GVTENCFF549JAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB945FGG richard-myers:SL161362 "ENCFF549JAY,ENCFF598GVT" HiSeq 2000 2017-02-02T05:40:40.185105+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292KJ003693jxfkJ697fqJF ENCSR373YFT https://www.encodeproject.org/experiments/ENCSR373YFT control Control-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF262GCW https://www.encodeproject.org/files/ENCFF262GCW/@@download/ENCFF262GCW.bam ENCFF099ASY https://www.encodeproject.org/files/ENCFF099ASY/@@download/ENCFF099ASY.bam 190.7 M 0 160.3 M 0.841 PE 76 76 native 64.1 M 0.0 M 62.1 M 0.651 0.97 0.97 39.30 270 1.01 0.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/76b4b52f-88eb-4499-8ec8-8b1acd419bac/@@download/cross_correlation_plot/ENCFF422VWSENCFF770ANY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB844MKE richard-myers:SL161363 "ENCFF770ANY,ENCFF422VWS" HiSeq 2000 2017-02-02T08:59:08.606884+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293G7j0369BvG3VJ5qF22JY ENCSR452KMJ https://www.encodeproject.org/experiments/ENCSR452KMJ control Control-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF230BNN https://www.encodeproject.org/files/ENCFF230BNN/@@download/ENCFF230BNN.bam ENCFF782OBW https://www.encodeproject.org/files/ENCFF782OBW/@@download/ENCFF782OBW.bam 93.1 M 0 78.6 M 0.845 PE 76 76 native 30.7 M 0.0 M 30.3 M 0.651 0.99 0.99 89.26 285 1.01 0.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c0f4f77-d997-41c7-877d-5c4d6c6ff6d1/@@download/cross_correlation_plot/ENCFF962ZAEENCFF310JWS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB887LFZ richard-myers:SL161371 "ENCFF962ZAE,ENCFF310JWS" HiSeq 2000 2017-02-02T02:32:12.736594+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2938K003693q2BXJ6Zx9XyZ ENCSR662VAE https://www.encodeproject.org/experiments/ENCSR662VAE control Control-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF359QFZ https://www.encodeproject.org/files/ENCFF359QFZ/@@download/ENCFF359QFZ.bam ENCFF077KNC https://www.encodeproject.org/files/ENCFF077KNC/@@download/ENCFF077KNC.bam 115.0 M 0 99.6 M 0.867 PE 76 76 native 40.1 M 0.0 M 39.5 M 0.688 0.99 0.99 88.84 285 1.01 0.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/01bd9ed5-4148-48f8-883b-d21d6e9d5945/@@download/cross_correlation_plot/ENCFF846FCWENCFF908NQG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB436GAO richard-myers:SL161372 "ENCFF846FCW,ENCFF908NQG" HiSeq 2000 2017-02-02T04:18:22.791592+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F29331j03698K796J5yq8Qg8 ENCSR116RGC https://www.encodeproject.org/experiments/ENCSR116RGC transcription factor EP300-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF132KSK https://www.encodeproject.org/files/ENCFF132KSK/@@download/ENCFF132KSK.bam ENCFF634EAR https://www.encodeproject.org/files/ENCFF634EAR/@@download/ENCFF634EAR.bam 64.3 M 0 50.2 M 0.781 PE 76 76 native 13.1 M 0.0 M 12.3 M 0.382 0.93 0.93 15.31 120 1.14 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/b17b4c02-0684-4683-b67b-a245c5bc3385/@@download/cross_correlation_plot/ENCFF032RPGENCFF858ZHX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB642UGQ richard-myers:SL161355 "ENCFF858ZHX,ENCFF032RPG" HiSeq 2000 2017-02-02T01:22:33.404443+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293Kzj036951p1PJ64F8fzf ENCSR360BLQ https://www.encodeproject.org/experiments/ENCSR360BLQ transcription factor EP300-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF959BPW https://www.encodeproject.org/files/ENCFF959BPW/@@download/ENCFF959BPW.bam ENCFF799DKV https://www.encodeproject.org/files/ENCFF799DKV/@@download/ENCFF799DKV.bam 107.6 M 0 96.9 M 0.900 PE 76 76 native 39.1 M 0.0 M 37.6 M 0.700 0.96 0.96 27.06 120 1.10 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/847ecbf3-691d-479a-8b5d-0a7603721084/@@download/cross_correlation_plot/ENCFF644XXXENCFF754KUW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB916NHI richard-myers:SL161349 "ENCFF754KUW,ENCFF644XXX" HiSeq 2000 2017-02-02T03:50:49.601092+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2936V00369BpyVQJ710fx3K ENCSR862NOW https://www.encodeproject.org/experiments/ENCSR862NOW transcription factor EP300-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF047HQY https://www.encodeproject.org/files/ENCFF047HQY/@@download/ENCFF047HQY.bam ENCFF607GXS https://www.encodeproject.org/files/ENCFF607GXS/@@download/ENCFF607GXS.bam 121.1 M 0 110.5 M 0.912 PE 76 76 native 44.0 M 0.0 M 41.9 M 0.692 0.95 0.95 20.78 125 1.06 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/5834f3aa-b10f-4837-a25b-c503913d7456/@@download/cross_correlation_plot/ENCFF481CKZENCFF817NUS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB851FLN richard-myers:SL161364 "ENCFF481CKZ,ENCFF817NUS" HiSeq 2000 2017-02-02T05:18:06.572943+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2930fj03696Kgy2J6PFqv8K ENCSR891WPD https://www.encodeproject.org/experiments/ENCSR891WPD transcription factor EP300-human esophagus muscularis mucosa tissue 1 richard-myers ENCODE3 GRCh38 ENCFF840PIA https://www.encodeproject.org/files/ENCFF840PIA/@@download/ENCFF840PIA.bam ENCFF300ZIE https://www.encodeproject.org/files/ENCFF300ZIE/@@download/ENCFF300ZIE.bam 68.9 M 0 63.6 M 0.923 PE 76 76 native 25.9 M 0.0 M 25.0 M 0.726 0.96 0.96 28.00 130 1.09 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/a12a410d-82fc-4de4-810b-e2fcd24f5498/@@download/cross_correlation_plot/ENCFF663CEYENCFF913NPA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB811GNK richard-myers:SL161365 "ENCFF913NPA,ENCFF663CEY" HiSeq 2000 2017-02-02T01:23:50.694964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2930100369BvG3VJ5qF226F ENCSR023BPG https://www.encodeproject.org/experiments/ENCSR023BPG control Control-human gastroesophageal sphincter tissue 1 richard-myers ENCODE3 GRCh38 ENCFF446MXQ https://www.encodeproject.org/files/ENCFF446MXQ/@@download/ENCFF446MXQ.bam ENCFF098SSJ https://www.encodeproject.org/files/ENCFF098SSJ/@@download/ENCFF098SSJ.bam 98.7 M 0 79.9 M 0.809 PE 76 76 native 31.9 M 0.0 M 31.0 M 0.628 0.98 0.98 40.79 300 1.01 0.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/3244b231-3a5e-461d-ba91-2e7a179c57f0/@@download/cross_correlation_plot/ENCFF485SFRENCFF005FTS.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB935OYE richard-myers:SL161400 "ENCFF485SFR,ENCFF005FTS" HiSeq 2000 2017-02-02T02:24:47.133911+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F29387003698K796J5yq8Qk3 ENCSR336ZYT https://www.encodeproject.org/experiments/ENCSR336ZYT control Control-human gastroesophageal sphincter tissue 1 richard-myers ENCODE3 GRCh38 ENCFF955AEQ https://www.encodeproject.org/files/ENCFF955AEQ/@@download/ENCFF955AEQ.bam ENCFF665VYT https://www.encodeproject.org/files/ENCFF665VYT/@@download/ENCFF665VYT.bam 71.9 M 0 57.6 M 0.800 PE 76 76 native 22.6 M 0.0 M 22.1 M 0.615 0.98 0.98 54.99 335 1.01 0.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/f559fc11-ced5-4bf5-b309-27e086481b86/@@download/cross_correlation_plot/ENCFF794FIOENCFF667MAD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB585QPB richard-myers:SL161401 "ENCFF794FIO,ENCFF667MAD" HiSeq 2000 2017-02-02T01:05:02.283687+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2932q003693jxfkJ697fv1v ENCSR810YKX https://www.encodeproject.org/experiments/ENCSR810YKX control Control-human gastroesophageal sphincter tissue 1 richard-myers ENCODE3 GRCh38 ENCFF369ZJF https://www.encodeproject.org/files/ENCFF369ZJF/@@download/ENCFF369ZJF.bam ENCFF355XJX https://www.encodeproject.org/files/ENCFF355XJX/@@download/ENCFF355XJX.bam 81.8 M 0 63.1 M 0.771 PE 76 76 native 24.5 M 0.0 M 23.9 M 0.585 0.98 0.98 50.13 305 1.01 0.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/6b4ce177-1f89-47e2-9a21-c788670e845e/@@download/cross_correlation_plot/ENCFF155YWFENCFF227FJX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB740WXM richard-myers:SL161391 "ENCFF227FJX,ENCFF155YWF" HiSeq 2000 2017-02-02T01:23:36.680725+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292z0j0369BvG3VJ5qF225Y ENCSR976KYQ https://www.encodeproject.org/experiments/ENCSR976KYQ control Control-human gastroesophageal sphincter tissue 1 richard-myers ENCODE3 GRCh38 ENCFF991TPT https://www.encodeproject.org/files/ENCFF991TPT/@@download/ENCFF991TPT.bam ENCFF126WZA https://www.encodeproject.org/files/ENCFF126WZA/@@download/ENCFF126WZA.bam 75.4 M 0 64.7 M 0.859 PE 76 76 native 24.6 M 0.0 M 24.0 M 0.638 0.98 0.98 57.68 90 1.11 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/55eaf4e9-7bbe-42b6-984e-e4337786771f/@@download/cross_correlation_plot/ENCFF951WSOENCFF960XDG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB589WEA richard-myers:SL161390 "ENCFF951WSO,ENCFF960XDG" HiSeq 2000 2017-02-02T01:43:07.090291+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293V6j03693q2BXJ6Zx9Y2g ENCSR088VUG https://www.encodeproject.org/experiments/ENCSR088VUG transcription factor EP300-human gastroesophageal sphincter tissue 1 richard-myers ENCODE3 GRCh38 ENCFF236PLN https://www.encodeproject.org/files/ENCFF236PLN/@@download/ENCFF236PLN.bam ENCFF222RIN https://www.encodeproject.org/files/ENCFF222RIN/@@download/ENCFF222RIN.bam 156.7 M 0 137.8 M 0.879 PE 76 76 native 56.2 M 0.0 M 54.0 M 0.690 0.96 0.96 26.42 90 1.06 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/e753f359-10bb-4879-a2a2-93b8360c7102/@@download/cross_correlation_plot/ENCFF554ZQUENCFF762GTE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB029YPT richard-myers:SL161388 "ENCFF762GTE,ENCFF554ZQU" HiSeq 2000 2017-02-02T07:37:26.555640+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2939pQ03695y6gFJ6jy81fV ENCSR551MLB https://www.encodeproject.org/experiments/ENCSR551MLB transcription factor EP300-human gastroesophageal sphincter tissue 1 richard-myers ENCODE3 GRCh38 ENCFF210CWN https://www.encodeproject.org/files/ENCFF210CWN/@@download/ENCFF210CWN.bam ENCFF175OKZ https://www.encodeproject.org/files/ENCFF175OKZ/@@download/ENCFF175OKZ.bam 58.7 M 0 51.3 M 0.875 PE 76 76 native 21.2 M 0.0 M 20.4 M 0.694 0.96 0.96 26.02 120 1.21 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/08507d77-7014-439b-9036-7aba68f2f2cd/@@download/cross_correlation_plot/ENCFF461DSKENCFF245QAX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB032HYI richard-myers:SL161378 "ENCFF461DSK,ENCFF245QAX" HiSeq 2000 2017-02-02T01:04:04.198531+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293Fv803693q2BXJ6Zx9Y0g ENCSR906OMM https://www.encodeproject.org/experiments/ENCSR906OMM transcription factor EP300-human gastroesophageal sphincter tissue 1 richard-myers ENCODE3 GRCh38 ENCFF924UDG https://www.encodeproject.org/files/ENCFF924UDG/@@download/ENCFF924UDG.bam ENCFF244WFQ https://www.encodeproject.org/files/ENCFF244WFQ/@@download/ENCFF244WFQ.bam 133.2 M 0 118.2 M 0.888 PE 76 76 native 40.1 M 0.0 M 35.0 M 0.525 0.87 0.87 7.66 150 1.06 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/36903161-7600-4fe8-b773-fb014a6efbfa/@@download/cross_correlation_plot/ENCFF779XEBENCFF277TIE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB805ESY richard-myers:SL161389 "ENCFF779XEB,ENCFF277TIE" HiSeq 2000 2017-02-02T07:55:51.797195+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2937YQ0369BpyVQJ710fx4J ENCSR000BQK https://www.encodeproject.org/experiments/ENCSR000BQK transcription factor ATF2-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF396BCM https://www.encodeproject.org/files/ENCFF396BCM/@@download/ENCFF396BCM.bam ENCFF466MRK https://www.encodeproject.org/files/ENCFF466MRK/@@download/ENCFF466MRK.bam 39.3 M 0 31.0 M 0.790 SE 36 36 native 0.0 M 24.3 M 22.1 M 0.562 0.92 0.94 21.12 125 1.17 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/61848d31-dd91-43c7-977a-184352d79c64/@@download/cross_correlation_plot/ENCFF000NSE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNM richard-myers:SL7282 ENCFF000NSE Illumina Genome Analyzer IIx 2016-12-11T03:29:30.678392+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164JjQ0369GF0YB1zjPf6Yp ENCSR000BQK https://www.encodeproject.org/experiments/ENCSR000BQK transcription factor ATF2-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF994ZHD https://www.encodeproject.org/files/ENCFF994ZHD/@@download/ENCFF994ZHD.bam ENCFF125CKC https://www.encodeproject.org/files/ENCFF125CKC/@@download/ENCFF125CKC.bam 41.4 M 0 35.8 M 0.865 SE 36 36 native 0.0 M 28.0 M 25.1 M 0.608 0.91 0.93 15.60 145 1.10 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9fa835e-f1ed-47e2-b140-600b8e580357/@@download/cross_correlation_plot/ENCFF000NSG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMK richard-myers:SL7561 ENCFF000NSG Illumina Genome Analyzer IIx 2016-12-11T03:29:00.802877+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Jx00369PvYp91zK1PxB3 ENCSR000BJY https://www.encodeproject.org/experiments/ENCSR000BJY transcription factor ATF3-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF478PVM https://www.encodeproject.org/files/ENCFF478PVM/@@download/ENCFF478PVM.bam ENCFF207HSI https://www.encodeproject.org/files/ENCFF207HSI/@@download/ENCFF207HSI.bam 10.8 M 0 7.0 M 0.650 SE 36 36 native 0.0 M 5.3 M 3.2 M 0.293 0.60 0.57 2.12 90 1.57 6.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7b42c7a-5e48-4fe4-809e-e2e14fb43135/@@download/cross_correlation_plot/ENCFF000NSI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVR richard-myers:SL1269 ENCFF000NSI Illumina Genome Analyzer IIx 2016-12-11T03:55:54.907585+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1655Qj0369KQ3Yk1yz1kgfZ ENCSR000BJY https://www.encodeproject.org/experiments/ENCSR000BJY transcription factor ATF3-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF039PAG https://www.encodeproject.org/files/ENCFF039PAG/@@download/ENCFF039PAG.bam ENCFF810MKZ https://www.encodeproject.org/files/ENCFF810MKZ/@@download/ENCFF810MKZ.bam 26.1 M 0 23.1 M 0.886 SE 36 36 native 0.0 M 17.7 M 15.1 M 0.579 0.86 0.85 6.57 130 1.14 2.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a87e943-00f3-45c4-a44c-779e1dab00a6/@@download/cross_correlation_plot/ENCFF000NSP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVQ richard-myers:SL1508 ENCFF000NSP Illumina Genome Analyzer IIx 2016-12-11T04:06:49.074325+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1655f00369KQ3Yk1yz1kgfx ENCSR000BGT https://www.encodeproject.org/experiments/ENCSR000BGT transcription factor BATF-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF399QIP https://www.encodeproject.org/files/ENCFF399QIP/@@download/ENCFF399QIP.bam ENCFF452LSN https://www.encodeproject.org/files/ENCFF452LSN/@@download/ENCFF452LSN.bam 27.0 M 0 19.1 M 0.707 SE 36 36 native 0.0 M 13.8 M 13.1 M 0.484 0.95 0.95 21.81 105 1.41 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/019048e5-dd67-4d22-8b55-f44cee10d3be/@@download/cross_correlation_plot/ENCFF000NSW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIZ richard-myers:SL839 ENCFF000NSW Illumina Genome Analyzer IIx 2016-12-11T03:25:45.032620+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164bV003696Kk1YFv8qy566 ENCSR000BGT https://www.encodeproject.org/experiments/ENCSR000BGT transcription factor BATF-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF802IZN https://www.encodeproject.org/files/ENCFF802IZN/@@download/ENCFF802IZN.bam ENCFF183OSG https://www.encodeproject.org/files/ENCFF183OSG/@@download/ENCFF183OSG.bam 24.9 M 0 20.1 M 0.806 SE 36 36 native 0.0 M 15.1 M 14.2 M 0.569 0.94 0.95 28.23 105 2.11 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/df34d0c6-8748-43bf-b3dd-52d2d90f2da4/@@download/cross_correlation_plot/ENCFF000NSX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJA richard-myers:SL985 ENCFF000NSX Illumina Genome Analyzer IIx 2016-12-11T03:26:34.649316+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164bbj0369GF0YB1zjPf6fF ENCSR000BHA https://www.encodeproject.org/experiments/ENCSR000BHA transcription factor BCL11A-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF580GMF https://www.encodeproject.org/files/ENCFF580GMF/@@download/ENCFF580GMF.bam ENCFF272XDG https://www.encodeproject.org/files/ENCFF272XDG/@@download/ENCFF272XDG.bam 26.1 M 0 19.4 M 0.743 SE 36 36 native 0.0 M 13.8 M 12.7 M 0.487 0.93 0.93 13.59 95 1.24 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/3092ff06-d6d3-41a8-84ce-1c8e3467a041/@@download/cross_correlation_plot/ENCFF000NTD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLI richard-myers:SL650 ENCFF000NTD Illumina Genome Analyzer IIx 2016-12-11T04:20:49.081498+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Qv003697yz601ypVJ3fB ENCSR000BHA https://www.encodeproject.org/experiments/ENCSR000BHA transcription factor BCL11A-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF942EVB https://www.encodeproject.org/files/ENCFF942EVB/@@download/ENCFF942EVB.bam ENCFF724BUK https://www.encodeproject.org/files/ENCFF724BUK/@@download/ENCFF724BUK.bam 51.2 M 0 22.3 M 0.436 SE 36 36 native 0.0 M 12.9 M 12.4 M 0.242 0.97 0.97 44.36 110 1.23 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/458def9b-e0b6-4fdc-8b70-c32cab61879c/@@download/cross_correlation_plot/ENCFF000NTH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLJ richard-myers:SL976 ENCFF000NTH Illumina Genome Analyzer IIx 2016-12-11T04:30:30.552835+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165V0j0369PvYp91zK1PxYK ENCSR000BNQ https://www.encodeproject.org/experiments/ENCSR000BNQ transcription factor BCL3-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF227WBP https://www.encodeproject.org/files/ENCFF227WBP/@@download/ENCFF227WBP.bam ENCFF408CVD https://www.encodeproject.org/files/ENCFF408CVD/@@download/ENCFF408CVD.bam 39.1 M 0 34.2 M 0.875 SE 36 36 native 0.0 M 26.1 M 14.2 M 0.365 0.55 0.51 1.77 120 1.27 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/18fc8acf-a51b-491b-8103-6305e3220747/@@download/cross_correlation_plot/ENCFF000NTN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCX richard-myers:SL3728 ENCFF000NTN Illumina Genome Analyzer IIx 2016-12-11T02:56:11.618805+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16413803699Z3Y8493qbq0X ENCSR000BNQ https://www.encodeproject.org/experiments/ENCSR000BNQ transcription factor BCL3-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF488UTP https://www.encodeproject.org/files/ENCFF488UTP/@@download/ENCFF488UTP.bam ENCFF563KYU https://www.encodeproject.org/files/ENCFF563KYU/@@download/ENCFF563KYU.bam 27.8 M 0 23.8 M 0.856 SE 36 36 native 0.0 M 16.5 M 7.3 M 0.261 0.44 0.44 1.56 120 1.13 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a0208cf-6597-457f-b03b-fcecf00b8ac8/@@download/cross_correlation_plot/ENCFF000NTL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JND richard-myers:SL3931 ENCFF000NTL Illumina Genome Analyzer IIx 2016-12-11T02:35:03.022951+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16418003697K4B1J71pxzy9 ENCSR000BJZ https://www.encodeproject.org/experiments/ENCSR000BJZ "RNA binding protein,transcription factor" BCLAF1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF809UVF https://www.encodeproject.org/files/ENCFF809UVF/@@download/ENCFF809UVF.bam ENCFF881AUO https://www.encodeproject.org/files/ENCFF881AUO/@@download/ENCFF881AUO.bam 31.2 M 0 28.0 M 0.900 SE 36 36 native 0.0 M 21.7 M 19.9 M 0.639 0.92 0.92 11.91 135 1.13 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/78303f18-6d14-47ef-b882-e807ef97fbd3/@@download/cross_correlation_plot/ENCFF000NTS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEX richard-myers:SL1509 ENCFF000NTS Illumina Genome Analyzer IIx 2016-12-12T17:17:21.042605+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1625F003690xXYVJ7Fj2bpG ENCSR000BJZ https://www.encodeproject.org/experiments/ENCSR000BJZ "RNA binding protein,transcription factor" BCLAF1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF163XSL https://www.encodeproject.org/files/ENCFF163XSL/@@download/ENCFF163XSL.bam ENCFF250QDG https://www.encodeproject.org/files/ENCFF250QDG/@@download/ENCFF250QDG.bam 37.6 M 0 33.2 M 0.882 SE 36 36 native 0.0 M 25.5 M 24.5 M 0.652 0.96 0.97 41.40 120 1.10 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6c53691-f1c7-42e8-a3fb-6487f5660f40/@@download/cross_correlation_plot/ENCFF000NTV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPU richard-myers:SL2128 ENCFF000NTV Illumina Genome Analyzer IIx 2016-12-12T17:17:41.810634+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1625P0036933PVVJ7Qq0146 ENCSR860UHK https://www.encodeproject.org/experiments/ENCSR860UHK transcription factor CBFB-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF890TFD https://www.encodeproject.org/files/ENCFF890TFD/@@download/ENCFF890TFD.bam ENCFF870XDV https://www.encodeproject.org/files/ENCFF870XDV/@@download/ENCFF870XDV.bam 31.3 M 0 28.2 M 0.900 SE 50 50 native 0.0 M 23.5 M 21.9 M 0.701 0.94 0.94 18.02 120 1.09 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/557514e5-5f32-467e-bc42-876a4b83c3de/@@download/cross_correlation_plot/ENCFF221TOX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB717JLD richard-myers:SL81107 ENCFF221TOX HiSeq 2000 2016-10-09T17:07:05.305516+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3p2j0jv1g5yGjfvVx0Kf9 ENCSR860UHK https://www.encodeproject.org/experiments/ENCSR860UHK transcription factor CBFB-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF127DWU https://www.encodeproject.org/files/ENCFF127DWU/@@download/ENCFF127DWU.bam ENCFF010SVS https://www.encodeproject.org/files/ENCFF010SVS/@@download/ENCFF010SVS.bam 32.2 M 0 22.2 M 0.689 SE 50 50 native 0.0 M 18.3 M 16.9 M 0.523 0.93 0.93 14.38 90 1.08 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6f92e34-a65b-4b11-ad2e-eb46bf7f70dc/@@download/cross_correlation_plot/ENCFF862QDQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB404WIG richard-myers:SL120570 ENCFF862QDQ HiSeq 2000 2016-10-09T17:06:31.999195+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3p480jv1QxJBfj5Zb2pJ6 ENCSR372GIN https://www.encodeproject.org/experiments/ENCSR372GIN "transcription factor,chromatin remodeller" CBX5-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF554RCH https://www.encodeproject.org/files/ENCFF554RCH/@@download/ENCFF554RCH.bam ENCFF626FVT https://www.encodeproject.org/files/ENCFF626FVT/@@download/ENCFF626FVT.bam 45.1 M 0 27.7 M 0.615 SE 50 50 native 0.0 M 22.2 M 15.8 M 0.351 0.74 0.78 4.63 90 1.13 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb493d1d-4afa-47f4-aaf9-1eb1fc40b5dc/@@download/cross_correlation_plot/ENCFF887BKA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB652VDL richard-myers:SL26337 ENCFF887BKA HiSeq 2000 2016-09-01T17:41:06.470675+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPpj0369PF1G9JJQXfYxB ENCSR372GIN https://www.encodeproject.org/experiments/ENCSR372GIN "transcription factor,chromatin remodeller" CBX5-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF772ZLA https://www.encodeproject.org/files/ENCFF772ZLA/@@download/ENCFF772ZLA.bam ENCFF692MUQ https://www.encodeproject.org/files/ENCFF692MUQ/@@download/ENCFF692MUQ.bam 35.0 M 0 26.6 M 0.760 SE 50 50 native 0.0 M 22.0 M 16.4 M 0.470 0.76 0.76 3.93 70 1.13 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/79d918eb-138d-4c69-be36-788062827ffe/@@download/cross_correlation_plot/ENCFF354VZR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB821YAA richard-myers:SL23817 ENCFF354VZR HiSeq 2000 2016-09-01T17:40:53.927400+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPy00369B5KbZ6VQxzg9k ENCSR000BRX https://www.encodeproject.org/experiments/ENCSR000BRX transcription factor CEBPB-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF310YCW https://www.encodeproject.org/files/ENCFF310YCW/@@download/ENCFF310YCW.bam ENCFF044FXJ https://www.encodeproject.org/files/ENCFF044FXJ/@@download/ENCFF044FXJ.bam 44.1 M 0 38.7 M 0.878 SE 36 36 native 0.0 M 30.1 M 28.5 M 0.646 0.96 0.96 25.82 95 1.04 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/5648fab0-aaea-4d5d-8a3d-d3e157bfd3c5/@@download/cross_correlation_plot/ENCFF000NUD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFV richard-myers:SL8084 ENCFF000NUD Illumina Genome Analyzer IIx 2016-12-11T04:58:37.945938+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1661380369GF0YB1zjPf74F ENCSR000BRX https://www.encodeproject.org/experiments/ENCSR000BRX transcription factor CEBPB-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF713GDD https://www.encodeproject.org/files/ENCFF713GDD/@@download/ENCFF713GDD.bam ENCFF792UQJ https://www.encodeproject.org/files/ENCFF792UQJ/@@download/ENCFF792UQJ.bam 21.5 M 0 19.3 M 0.897 SE 36 36 native 0.0 M 14.8 M 14.4 M 0.670 0.98 0.98 53.78 105 1.04 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/7833c797-d99e-4457-80ce-be126be9595b/@@download/cross_correlation_plot/ENCFF000NUB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFU richard-myers:SL9542 ENCFF000NUB Illumina Genome Analyzer IIx 2016-12-11T04:45:33.148679+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16618Q0369GF0YB1zjPf74f ENCSR000BGH https://www.encodeproject.org/experiments/ENCSR000BGH control Control-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF562HPN https://www.encodeproject.org/files/ENCFF562HPN/@@download/ENCFF562HPN.bam ENCFF294FNY https://www.encodeproject.org/files/ENCFF294FNY/@@download/ENCFF294FNY.bam 80.5 M 0 41.5 M 0.516 SE 36 36 native 0.0 M 27.2 M 26.6 M 0.331 0.98 0.98 65.34 105 1.01 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/266fda8e-90aa-4c9a-b561-cefcae861915/@@download/cross_correlation_plot/ENCFF000OCW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZD richard-myers:SL516 ENCFF000OCW Illumina Genome Analyzer IIx 2016-10-26T17:39:45.822859+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0828yQ036923pJJqk9xzYpq ENCSR000BGH https://www.encodeproject.org/experiments/ENCSR000BGH control Control-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF438FFV https://www.encodeproject.org/files/ENCFF438FFV/@@download/ENCFF438FFV.bam ENCFF248TVY https://www.encodeproject.org/files/ENCFF248TVY/@@download/ENCFF248TVY.bam 52.5 M 0 36.0 M 0.686 SE 36 36 native 0.0 M 24.6 M 23.9 M 0.456 0.98 0.98 48.38 100 1.02 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e5e3cb6-1a62-426c-b2ac-b15e75d8e7c6/@@download/cross_correlation_plot/ENCFF000OCU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMZ richard-myers:SL517 ENCFF000OCU Illumina Genome Analyzer IIx 2016-10-26T17:44:27.994226+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829400369F7fQjy59kFgz3 ENCSR000BGH https://www.encodeproject.org/experiments/ENCSR000BGH control Control-human GM12878 immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF100EIH https://www.encodeproject.org/files/ENCFF100EIH/@@download/ENCFF100EIH.bam ENCFF446EKX https://www.encodeproject.org/files/ENCFF446EKX/@@download/ENCFF446EKX.bam 27.6 M 0 18.9 M 0.683 SE 36 36 native 0.0 M 12.9 M 12.6 M 0.457 0.98 0.98 56.56 105 1.02 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/e3ea2c08-aa48-4d40-a366-96df2a30cdce/@@download/cross_correlation_plot/ENCFF000OCS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZC richard-myers:SL678 ENCFF000OCS Illumina Genome Analyzer IIx 2016-10-26T17:43:21.481173+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08299j03699pQzk2JB6K7x8 ENCSR000BGJ https://www.encodeproject.org/experiments/ENCSR000BGJ control Control-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF862QZT https://www.encodeproject.org/files/ENCFF862QZT/@@download/ENCFF862QZT.bam ENCFF629YWV https://www.encodeproject.org/files/ENCFF629YWV/@@download/ENCFF629YWV.bam 24.7 M 0 24.1 M 0.973 SE 25 25 native 0.0 M 14.9 M 14.3 M 0.578 0.96 0.98 57.81 80 1.07 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2b378f2-0556-4c11-aae2-b410f208d693/@@download/cross_correlation_plot/ENCFF000ODG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCL richard-myers:SL217 ENCFF000ODG Illumina Genome Analyzer IIx 2016-10-26T17:36:05.210389+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082P1Q03699VK2qfkF2Yj3F ENCSR000BGJ https://www.encodeproject.org/experiments/ENCSR000BGJ control Control-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF289ONG https://www.encodeproject.org/files/ENCFF289ONG/@@download/ENCFF289ONG.bam ENCFF894ZKV https://www.encodeproject.org/files/ENCFF894ZKV/@@download/ENCFF894ZKV.bam 38.0 M 0 36.6 M 0.963 SE 25 25 native 0.0 M 22.7 M 21.8 M 0.573 0.96 0.97 46.39 90 1.05 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/429bc757-a231-49d7-b848-e45c078a500b/@@download/cross_correlation_plot/ENCFF000ODJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCZ richard-myers:SL218 ENCFF000ODJ Illumina Genome Analyzer IIx 2016-10-26T17:37:15.928561+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082P7Q03691jJ0BZ9F19V9Y ENCSR000BMS https://www.encodeproject.org/experiments/ENCSR000BMS control Control-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF488YYE https://www.encodeproject.org/files/ENCFF488YYE/@@download/ENCFF488YYE.bam ENCFF294LIH https://www.encodeproject.org/files/ENCFF294LIH/@@download/ENCFF294LIH.bam 62.1 M 0 58.1 M 0.937 SE 36 36 native 0.0 M 44.8 M 21.0 M 0.338 0.47 0.00 0.00 0 1.01 0.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/b0ab2000-83c3-458c-bd55-7cf34dfb6708/@@download/cross_correlation_plot/ENCFF000ODP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPC richard-myers:SL1613 ENCFF000ODP Illumina Genome Analyzer IIx 2016-10-26T17:44:27.002858+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0825Xj0369PQyG3V5B44Q12 ENCSR000BNF https://www.encodeproject.org/experiments/ENCSR000BNF control Control-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF430ZCF https://www.encodeproject.org/files/ENCFF430ZCF/@@download/ENCFF430ZCF.bam ENCFF399QWL https://www.encodeproject.org/files/ENCFF399QWL/@@download/ENCFF399QWL.bam 27.9 M 0 26.5 M 0.952 SE 36 36 native 0.0 M 20.8 M 20.1 M 0.723 0.97 0.97 41.66 150 1.01 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1503a08-5108-4f76-a6d6-a828bc160334/@@download/cross_correlation_plot/ENCFF000ODO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYW richard-myers:SL3979 ENCFF000ODO Illumina Genome Analyzer IIx 2016-10-26T17:36:36.322500+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Vbj03694q32PPxBJ67XG ENCSR000BVP https://www.encodeproject.org/experiments/ENCSR000BVP control Control-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF537DAJ https://www.encodeproject.org/files/ENCFF537DAJ/@@download/ENCFF537DAJ.bam ENCFF877PBK https://www.encodeproject.org/files/ENCFF877PBK/@@download/ENCFF877PBK.bam 64.0 M 0 48.9 M 0.764 SE 36 36 native 0.0 M 36.8 M 36.2 M 0.565 0.99 0.99 123.39 105 1.01 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ce0a9ba-f647-4a4d-94c6-e660dbdca822/@@download/cross_correlation_plot/ENCFF000ODV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXA richard-myers:SL6022 ENCFF000ODV Illumina Genome Analyzer IIx 2016-10-29T18:02:04.327977+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B24000jv1bYX1xgJBKG5BX ENCSR000BVP https://www.encodeproject.org/experiments/ENCSR000BVP control Control-human GM12878 immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF966AVZ https://www.encodeproject.org/files/ENCFF966AVZ/@@download/ENCFF966AVZ.bam ENCFF927AOE https://www.encodeproject.org/files/ENCFF927AOE/@@download/ENCFF927AOE.bam 30.0 M 0 28.0 M 0.935 SE 50 50 native 0.0 M 22.8 M 19.3 M 0.643 0.88 0.98 101.44 70 1.08 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/0968868b-0b2e-4b0a-963d-313bec318e06/@@download/cross_correlation_plot/ENCFF000ODZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPM richard-myers:SL12049 ENCFF000ODZ HiSeq 2000 2016-10-29T18:01:06.369399+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B242Q0jv1bYX1xgJBKG5Bq ENCSR000BVP https://www.encodeproject.org/experiments/ENCSR000BVP control Control-human GM12878 immortalized cell line 4 richard-myers ENCODE2 GRCh38 ENCFF754WTG https://www.encodeproject.org/files/ENCFF754WTG/@@download/ENCFF754WTG.bam ENCFF398XCF https://www.encodeproject.org/files/ENCFF398XCF/@@download/ENCFF398XCF.bam 39.0 M 0 36.8 M 0.942 SE 50 50 native 0.0 M 30.5 M 26.9 M 0.688 0.91 0.98 69.22 80 1.12 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/13d873b1-f0af-4049-b270-b32783316647/@@download/cross_correlation_plot/ENCFF000OEB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPN richard-myers:SL12789 ENCFF000OEB HiSeq 2000 2016-10-29T18:01:13.453319+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F0B24500jv1Xg2Q4k5K0k63F ENCSR136WQZ https://www.encodeproject.org/experiments/ENCSR136WQZ control Control-human GM12878 immortalized cell line 13 richard-myers ENCODE3 GRCh38 ENCFF409OXD https://www.encodeproject.org/files/ENCFF409OXD/@@download/ENCFF409OXD.bam ENCFF933WXM https://www.encodeproject.org/files/ENCFF933WXM/@@download/ENCFF933WXM.bam 55.6 M 0 53.7 M 0.967 SE 50 50 None 0.0 M 43.7 M 42.5 M 0.765 0.98 0.98 59.57 85 1.02 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/16427d18-a334-4822-b05d-92f20a3b3b4a/@@download/cross_correlation_plot/ENCFF598SBH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB417ZGG richard-myers:SL57455 ENCFF598SBH HiSeq 2000 2016-05-06T18:16:15.346190+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq6j003699b4kxvj2Yx1PF ENCSR237VSG https://www.encodeproject.org/experiments/ENCSR237VSG control Control-human GM12878 immortalized cell line 10 richard-myers ENCODE3 GRCh38 ENCFF423BBH https://www.encodeproject.org/files/ENCFF423BBH/@@download/ENCFF423BBH.bam ENCFF444PGT https://www.encodeproject.org/files/ENCFF444PGT/@@download/ENCFF444PGT.bam 22.7 M 0 22.1 M 0.974 SE 50 50 native 0.0 M 17.8 M 17.3 M 0.762 0.98 0.99 98.73 80 1.04 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0bb2d60-c15e-4fc0-bf89-bba5ad808057/@@download/cross_correlation_plot/ENCFF192IAC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB258FSQ richard-myers:SL36397 ENCFF192IAC HiSeq 2000 2016-10-26T16:26:30.783590+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0803Qj036923z1QYVBPkpqK ENCSR360XQV https://www.encodeproject.org/experiments/ENCSR360XQV control Control-human GM12878 immortalized cell line 11 richard-myers ENCODE3 GRCh38 ENCFF154WIU https://www.encodeproject.org/files/ENCFF154WIU/@@download/ENCFF154WIU.bam ENCFF429RAN https://www.encodeproject.org/files/ENCFF429RAN/@@download/ENCFF429RAN.bam 45.0 M 0 41.2 M 0.916 SE 50 50 None 0.0 M 32.6 M 30.4 M 0.676 0.94 0.97 46.38 100 1.04 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c416a2c-c1a0-4d3e-8cdd-5ad0585722cd/@@download/cross_correlation_plot/ENCFF002BFW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB472NPS richard-myers:SL31886 ENCFF002BFW HiSeq 2000 2016-05-06T18:14:03.775985+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqFV003690j2jgp42pQ2qG ENCSR436QMA https://www.encodeproject.org/experiments/ENCSR436QMA control Control-human GM12878 immortalized cell line 13 richard-myers ENCODE3 GRCh38 ENCFF145UTL https://www.encodeproject.org/files/ENCFF145UTL/@@download/ENCFF145UTL.bam ENCFF082GGD https://www.encodeproject.org/files/ENCFF082GGD/@@download/ENCFF082GGD.bam 32.7 M 0 31.7 M 0.969 SE 50 None 0.0 M 25.5 M 24.9 M 0.762 0.98 0.99 90.31 65 1.04 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc0bc6b2-35a9-49d5-9eb3-cafffec75fae/@@download/cross_correlation_plot/ENCFF166VXQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB047NYH richard-myers:SL45977 ENCFF166VXQ HiSeq 2000 2016-05-06T18:12:58.482693+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGzj036986q4kkQ2Q0KVY ENCSR596QDC https://www.encodeproject.org/experiments/ENCSR596QDC control Control-human GM12878 immortalized cell line 12 richard-myers ENCODE3 GRCh38 ENCFF747NOF https://www.encodeproject.org/files/ENCFF747NOF/@@download/ENCFF747NOF.bam ENCFF555CLQ https://www.encodeproject.org/files/ENCFF555CLQ/@@download/ENCFF555CLQ.bam 40.8 M 0 39.3 M 0.964 SE 50 50 None 0.0 M 32.2 M 31.3 M 0.768 0.98 0.98 74.56 65 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f8f3aff-e777-42f7-8178-a6f2e146bb76/@@download/cross_correlation_plot/ENCFF002BGA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB095ZWO richard-myers:SL41841 ENCFF002BGA HiSeq 2000 2016-05-06T18:10:55.072003+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQB8036961GyjjQ2QP8Xk ENCSR713ONE https://www.encodeproject.org/experiments/ENCSR713ONE control Control-human GM12878 immortalized cell line 10 richard-myers ENCODE3 GRCh38 ENCFF183AOM https://www.encodeproject.org/files/ENCFF183AOM/@@download/ENCFF183AOM.bam ENCFF657NYM https://www.encodeproject.org/files/ENCFF657NYM/@@download/ENCFF657NYM.bam 40.1 M 0 36.3 M 0.907 SE 50 50 None 0.0 M 28.0 M 26.4 M 0.658 0.96 0.97 45.86 70 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/b50f6571-dc01-4c92-82f8-cfaea54e9ac9/@@download/cross_correlation_plot/ENCFF225JIA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB641JSN richard-myers:SL23147 ENCFF225JIA HiSeq 2000 2016-05-06T18:07:14.866816+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqXbj0369PPK4xgv2b79P8 ENCSR785WMC https://www.encodeproject.org/experiments/ENCSR785WMC control Control-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF290EGQ https://www.encodeproject.org/files/ENCFF290EGQ/@@download/ENCFF290EGQ.bam ENCFF470ULU https://www.encodeproject.org/files/ENCFF470ULU/@@download/ENCFF470ULU.bam 26.0 M 0 25.3 M 0.973 SE 50 50 None 0.0 M 20.8 M 20.4 M 0.784 0.99 0.99 115.48 85 1.02 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9f6d7e5-0f59-485f-9f7a-a4a4cc0a91e9/@@download/cross_correlation_plot/ENCFF090NGH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB784QOP richard-myers:SL77415 ENCFF090NGH HiSeq 2000 2016-05-06T18:04:51.448306+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqb08036929FJGg42Xq271 ENCSR890ZMI https://www.encodeproject.org/experiments/ENCSR890ZMI control Control-human GM12878 immortalized cell line 11 richard-myers ENCODE3 GRCh38 ENCFF940GKZ https://www.encodeproject.org/files/ENCFF940GKZ/@@download/ENCFF940GKZ.bam ENCFF239NZB https://www.encodeproject.org/files/ENCFF239NZB/@@download/ENCFF239NZB.bam 117.0 M 0 112.5 M 0.962 SE 50 50 None 0.0 M 91.1 M 44.2 M 0.378 0.49 0.00 0.00 80 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0d6686a-3010-43fb-9299-865b9dad3020/@@download/cross_correlation_plot/ENCFF180PND-ENCFF381XXA_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB349BSG richard-myers:SL57454 "ENCFF381XXA,ENCFF180PND" HiSeq 2000 2016-05-06T18:07:30.170641+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqgx803692Fy2Pk02vGVkk ENCSR000BUF https://www.encodeproject.org/experiments/ENCSR000BUF transcription factor CREB1-human GM12878 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR839XZU https://www.encodeproject.org/experiments/ENCSR839XZU transcription factor CREM-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF614KRR https://www.encodeproject.org/files/ENCFF614KRR/@@download/ENCFF614KRR.bam ENCFF936WIW https://www.encodeproject.org/files/ENCFF936WIW/@@download/ENCFF936WIW.bam 25.4 M 0 24.2 M 0.953 SE 50 50 native 0.0 M 20.6 M 19.3 M 0.761 0.95 0.95 23.47 110 1.42 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/baea38da-4633-4328-84dc-9b1bc447ae79/@@download/cross_correlation_plot/ENCFF964RPP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB284GLV richard-myers:SL41783 ENCFF964RPP HiSeq 2000 2016-10-26T16:27:09.286731+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0803f00369GJ6xQfbB7BjxX ENCSR839XZU https://www.encodeproject.org/experiments/ENCSR839XZU transcription factor CREM-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF162MTY https://www.encodeproject.org/files/ENCFF162MTY/@@download/ENCFF162MTY.bam ENCFF581VMI https://www.encodeproject.org/files/ENCFF581VMI/@@download/ENCFF581VMI.bam 24.8 M 0 23.9 M 0.965 SE 50 50 native 0.0 M 20.1 M 19.1 M 0.769 0.96 0.96 27.28 110 1.17 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/3dc96ca4-0b10-419c-8e9d-823b445d72f6/@@download/cross_correlation_plot/ENCFF002BFH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB791ZRW richard-myers:SL43820 ENCFF002BFH HiSeq 2000 2016-10-09T17:00:13.891715+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0803p803697KPkyX9BPPpZb ENCSR000BGU https://www.encodeproject.org/experiments/ENCSR000BGU transcription factor EBF1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF426RGL https://www.encodeproject.org/files/ENCFF426RGL/@@download/ENCFF426RGL.bam ENCFF648JQE https://www.encodeproject.org/files/ENCFF648JQE/@@download/ENCFF648JQE.bam 48.9 M 0 32.3 M 0.660 SE 36 36 native 0.0 M 23.1 M 21.0 M 0.429 0.91 0.93 16.01 110 1.51 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/26e8b2d3-f7a9-4a41-845c-403c5924d1a8/@@download/cross_correlation_plot/ENCFF000NUV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAF richard-myers:SL745 ENCFF000NUV Illumina Genome Analyzer IIx 2016-12-11T00:54:21.995840+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163K98036969X0jJ6p3fffY ENCSR000BGU https://www.encodeproject.org/experiments/ENCSR000BGU transcription factor EBF1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF340QCB https://www.encodeproject.org/files/ENCFF340QCB/@@download/ENCFF340QCB.bam ENCFF164HPP https://www.encodeproject.org/files/ENCFF164HPP/@@download/ENCFF164HPP.bam 22.6 M 0 18.2 M 0.808 SE 36 36 native 0.0 M 13.7 M 12.7 M 0.563 0.93 0.95 23.61 110 2.12 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d18b434-9913-455f-be0f-f8429637d2f0/@@download/cross_correlation_plot/ENCFF000NUP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAG richard-myers:SL988 ENCFF000NUP Illumina Genome Analyzer IIx 2016-12-10T22:19:17.493650+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163KJQ03699Z3Y8493qbpqF ENCSR199WXF https://www.encodeproject.org/experiments/ENCSR199WXF transcription factor EED-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF408KYB https://www.encodeproject.org/files/ENCFF408KYB/@@download/ENCFF408KYB.bam ENCFF032UFJ https://www.encodeproject.org/files/ENCFF032UFJ/@@download/ENCFF032UFJ.bam 30.0 M 0 27.9 M 0.929 SE 50 50 native 0.0 M 22.8 M 21.6 M 0.718 0.95 0.96 24.31 145 1.21 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/358cc93c-0a29-4e37-b27b-4b69b4c87af6/@@download/cross_correlation_plot/ENCFF188ZWJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB931QSZ richard-myers:SL65222 ENCFF188ZWJ HiSeq 2500 2016-10-09T17:10:03.430110+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xKQ0jv1XYYX2Fxk3f4k6 ENCSR199WXF https://www.encodeproject.org/experiments/ENCSR199WXF transcription factor EED-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF632KTY https://www.encodeproject.org/files/ENCFF632KTY/@@download/ENCFF632KTY.bam ENCFF483IJC https://www.encodeproject.org/files/ENCFF483IJC/@@download/ENCFF483IJC.bam 26.4 M 0 24.7 M 0.935 SE 50 50 native 0.0 M 20.0 M 19.0 M 0.719 0.95 0.95 22.72 145 1.21 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/46cf58e7-abe3-4727-b97c-364f6b1cfda3/@@download/cross_correlation_plot/ENCFF324QQE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB319YHL richard-myers:SL68407 ENCFF324QQE HiSeq 2000 2016-10-09T17:09:57.154891+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3xQ00jv1g5yGjfvVx0Kp9 ENCSR000BMQ https://www.encodeproject.org/experiments/ENCSR000BMQ transcription factor EGR1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF029SZC https://www.encodeproject.org/files/ENCFF029SZC/@@download/ENCFF029SZC.bam ENCFF859ITQ https://www.encodeproject.org/files/ENCFF859ITQ/@@download/ENCFF859ITQ.bam 29.2 M 0 23.7 M 0.810 SE 36 36 native 0.0 M 17.0 M 9.9 M 0.339 0.58 0.55 2.02 95 1.32 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/20e992aa-f624-47a3-bc6f-86501f7465bf/@@download/cross_correlation_plot/ENCFF000NVC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFI richard-myers:SL3579 ENCFF000NVC Illumina Genome Analyzer IIx 2016-12-11T04:38:07.230859+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165pJj03692yykb1zBpz80J ENCSR000BMQ https://www.encodeproject.org/experiments/ENCSR000BMQ transcription factor EGR1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF735YIP https://www.encodeproject.org/files/ENCFF735YIP/@@download/ENCFF735YIP.bam ENCFF144GEQ https://www.encodeproject.org/files/ENCFF144GEQ/@@download/ENCFF144GEQ.bam 35.0 M 0 29.0 M 0.829 SE 36 36 native 0.0 M 21.4 M 17.2 M 0.490 0.80 0.80 4.73 85 1.37 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ef3abfb-6ca8-40ed-be9d-c3c49d4d868e/@@download/cross_correlation_plot/ENCFF000NVF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPB richard-myers:SL3828 ENCFF000NVF Illumina Genome Analyzer IIx 2016-12-11T04:42:32.262256+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165pXQ0369GF0YB1zjPf72P ENCSR000BRG https://www.encodeproject.org/experiments/ENCSR000BRG transcription factor EGR1-human GM12878 immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF100VNU https://www.encodeproject.org/files/ENCFF100VNU/@@download/ENCFF100VNU.bam ENCFF347QCT https://www.encodeproject.org/files/ENCFF347QCT/@@download/ENCFF347QCT.bam 43.0 M 0 27.7 M 0.645 SE 36 25 25 0.0 M 14.7 M 13.5 M 0.314 0.92 0.92 13.33 100 1.14 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f36929d-7645-490a-bc88-48af1b8ffa6f/@@download/cross_correlation_plot/ENCFF000NVB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFF richard-myers:SL482 ENCFF000NVB Illumina Genome Analyzer IIx 2017-01-07T07:15:04.421378+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1j7Q580369GZ0V250f2yPkZ ENCSR000BMB https://www.encodeproject.org/experiments/ENCSR000BMB transcription factor ELF1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF739SRY https://www.encodeproject.org/files/ENCFF739SRY/@@download/ENCFF739SRY.bam ENCFF648LTQ https://www.encodeproject.org/files/ENCFF648LTQ/@@download/ENCFF648LTQ.bam 31.2 M 0 23.0 M 0.739 SE 36 36 native 0.0 M 17.6 M 10.1 M 0.325 0.58 0.54 1.86 150 1.69 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/588419ba-d674-4edb-a893-251affc3220f/@@download/cross_correlation_plot/ENCFF000NVM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJX richard-myers:SL2253 ENCFF000NVM Illumina Genome Analyzer IIx 2016-12-11T06:50:03.140543+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166YpQ03692yykb1zBpz875 ENCSR000BMB https://www.encodeproject.org/experiments/ENCSR000BMB transcription factor ELF1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF735DGJ https://www.encodeproject.org/files/ENCFF735DGJ/@@download/ENCFF735DGJ.bam ENCFF091DBX https://www.encodeproject.org/files/ENCFF091DBX/@@download/ENCFF091DBX.bam 32.2 M 0 26.7 M 0.827 SE 36 36 native 0.0 M 18.5 M 14.3 M 0.444 0.78 0.79 4.77 140 2.02 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/a856c107-0a23-4a8a-a002-6be2882a8b5d/@@download/cross_correlation_plot/ENCFF000NVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNO richard-myers:SL3352 ENCFF000NVP Illumina Genome Analyzer IIx 2016-12-11T08:33:46.834847+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Z080369GF0YB1zjPf79V ENCSR000BHB https://www.encodeproject.org/experiments/ENCSR000BHB transcription factor EP300-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF725DLZ https://www.encodeproject.org/files/ENCFF725DLZ/@@download/ENCFF725DLZ.bam ENCFF465HGT https://www.encodeproject.org/files/ENCFF465HGT/@@download/ENCFF465HGT.bam 21.4 M 0 18.6 M 0.872 SE 36 36 native 0.0 M 13.3 M 12.6 M 0.588 0.94 0.94 17.57 105 1.09 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/c832f872-9401-4263-a2bb-ab626dc939ab/@@download/cross_correlation_plot/ENCFF000NZG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBG richard-myers:SL551 ENCFF000NZG Illumina Genome Analyzer IIx 2016-12-11T02:54:57.666586+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1644zQ03692pJ09J76g5g4y ENCSR000BHB https://www.encodeproject.org/experiments/ENCSR000BHB transcription factor EP300-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF238NNG https://www.encodeproject.org/files/ENCFF238NNG/@@download/ENCFF238NNG.bam ENCFF699DCV https://www.encodeproject.org/files/ENCFF699DCV/@@download/ENCFF699DCV.bam 14.1 M 0 9.4 M 0.664 SE 36 36 native 0.0 M 6.2 M 5.8 M 0.414 0.94 0.94 15.99 80 1.11 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/665e9098-92bb-4709-876a-87437aed7256/@@download/cross_correlation_plot/ENCFF000NZH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDN richard-myers:SL564 ENCFF000NZH Illumina Genome Analyzer IIx 2016-12-11T02:35:19.887489+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16454Q036933PVVJ7Qq01XF ENCSR000BKA https://www.encodeproject.org/experiments/ENCSR000BKA transcription factor ETS1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF606IKC https://www.encodeproject.org/files/ENCFF606IKC/@@download/ENCFF606IKC.bam ENCFF226OCU https://www.encodeproject.org/files/ENCFF226OCU/@@download/ENCFF226OCU.bam 26.1 M 0 22.7 M 0.868 SE 36 36 native 0.0 M 17.6 M 13.7 M 0.524 0.78 0.77 4.06 120 1.23 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/e38bfc04-b4b6-4b19-8b92-fd1a5e2a35f0/@@download/cross_correlation_plot/ENCFF000NVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBB richard-myers:SL1507 ENCFF000NVQ Illumina Genome Analyzer IIx 2016-12-10T21:10:12.632899+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1634Xj03693J2XX63yZ7Bx2 ENCSR000BKA https://www.encodeproject.org/experiments/ENCSR000BKA transcription factor ETS1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF135UPU https://www.encodeproject.org/files/ENCFF135UPU/@@download/ENCFF135UPU.bam ENCFF230YPD https://www.encodeproject.org/files/ENCFF230YPD/@@download/ENCFF230YPD.bam 27.8 M 0 20.5 M 0.738 SE 36 36 native 0.0 M 15.8 M 12.0 M 0.430 0.76 0.75 3.67 115 1.18 2.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/81236fed-c95a-4ce7-b57a-78e1f3591043/@@download/cross_correlation_plot/ENCFF000NVV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBA richard-myers:SL1655 ENCFF000NVV Illumina Genome Analyzer IIx 2016-12-10T21:03:07.026465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1634gQ03692pJ09J76g5fv5 ENCSR626VUC https://www.encodeproject.org/experiments/ENCSR626VUC transcription factor ETV6-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF383ODW https://www.encodeproject.org/files/ENCFF383ODW/@@download/ENCFF383ODW.bam ENCFF496BNB https://www.encodeproject.org/files/ENCFF496BNB/@@download/ENCFF496BNB.bam 34.8 M 0 32.9 M 0.948 SE 50 50 native 0.0 M 26.8 M 25.3 M 0.727 0.95 0.96 24.05 100 1.09 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/5171fb8a-5d34-4157-878e-00ebcfc7a38f/@@download/cross_correlation_plot/ENCFF002BFK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB714KFE richard-myers:SL41838 ENCFF002BFK HiSeq 2000 2016-10-09T17:00:41.166862+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Bfj0jv1g5yGjfvVx0P4x ENCSR626VUC https://www.encodeproject.org/experiments/ENCSR626VUC transcription factor ETV6-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF472MGT https://www.encodeproject.org/files/ENCFF472MGT/@@download/ENCFF472MGT.bam ENCFF764IXV https://www.encodeproject.org/files/ENCFF764IXV/@@download/ENCFF764IXV.bam 33.7 M 0 31.9 M 0.949 SE 50 50 native 0.0 M 26.7 M 24.1 M 0.715 0.91 0.92 12.31 140 1.16 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/2301d543-fdd5-4ca7-b969-df005376941f/@@download/cross_correlation_plot/ENCFF002BFL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB416GRB richard-myers:SL43828 ENCFF002BFL HiSeq 2000 2016-10-09T17:00:35.379770+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Bj00jv1XYYX2Fxk3f59P ENCSR000BRU https://www.encodeproject.org/experiments/ENCSR000BRU transcription factor FOXM1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF729JBI https://www.encodeproject.org/files/ENCFF729JBI/@@download/ENCFF729JBI.bam ENCFF807KJE https://www.encodeproject.org/files/ENCFF807KJE/@@download/ENCFF807KJE.bam 42.2 M 0 37.7 M 0.892 SE 36 36 native 0.0 M 29.6 M 27.6 M 0.654 0.94 0.95 19.58 130 1.13 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff3b11f0-170b-4775-92c1-dcfaa9156e83/@@download/cross_correlation_plot/ENCFF000NWG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHG richard-myers:SL7551 ENCFF000NWG Illumina Genome Analyzer IIx 2016-12-11T04:41:33.873020+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165fK003696z7JqGk4Yzy9J ENCSR000BRU https://www.encodeproject.org/experiments/ENCSR000BRU transcription factor FOXM1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF318LCX https://www.encodeproject.org/files/ENCFF318LCX/@@download/ENCFF318LCX.bam ENCFF839ARD https://www.encodeproject.org/files/ENCFF839ARD/@@download/ENCFF839ARD.bam 30.4 M 0 22.8 M 0.751 SE 36 36 native 0.0 M 17.5 M 13.5 M 0.446 0.80 0.84 7.40 130 1.10 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca5b98f5-4e4e-4b67-9f8b-0ec18107375d/@@download/cross_correlation_plot/ENCFF000NWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHH richard-myers:SL7834 ENCFF000NWE Illumina Genome Analyzer IIx 2016-12-11T04:32:10.887558+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165fY003699K237J9jY9kyG ENCSR000BGC https://www.encodeproject.org/experiments/ENCSR000BGC transcription factor GABPA-human GM12878 immortalized cell line richard-myers ENCODE2 GRCh38 ENCFF286JSA https://www.encodeproject.org/files/ENCFF286JSA/@@download/ENCFF286JSA.bam ENCFF282VGE https://www.encodeproject.org/files/ENCFF282VGE/@@download/ENCFF282VGE.bam 58.3 M 0 25.3 M 0.434 SE 25 25 0.0 M 14.7 M 13.3 M 0.228 0.90 0.93 17.08 80 1.56 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/7bf9f5c9-719b-45de-a4dc-5f5db1bdb5c9/@@download/cross_correlation_plot/ENCFF000NWM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf 2016-12-13T04:05:15.728241+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZvxQ03697K4B1J71py8VV ENCSR000BGC https://www.encodeproject.org/experiments/ENCSR000BGC transcription factor GABPA-human GM12878 immortalized cell line richard-myers ENCODE2 GRCh38 ENCFF050PEH https://www.encodeproject.org/files/ENCFF050PEH/@@download/ENCFF050PEH.bam ENCFF391ZBM https://www.encodeproject.org/files/ENCFF391ZBM/@@download/ENCFF391ZBM.bam 21.0 M 0 16.7 M 0.793 SE 25 25 0.0 M 10.5 M 8.6 M 0.411 0.83 0.84 5.75 95 1.83 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd19ed61-945b-400c-9fb1-cb37344dabad/@@download/cross_correlation_plot/ENCFF000NWN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf 2016-12-13T03:14:10.967472+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zy8Q03695Kj1j8qPQj0Zg ENCSR331HPA https://www.encodeproject.org/experiments/ENCSR331HPA transcription factor GABPA-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF988HVR https://www.encodeproject.org/files/ENCFF988HVR/@@download/ENCFF988HVR.bam ENCFF430LJF https://www.encodeproject.org/files/ENCFF430LJF/@@download/ENCFF430LJF.bam 18.4 M 0 15.9 M 0.860 SE 50 50 native 0.0 M 13.6 M 11.4 M 0.618 0.86 0.89 9.78 100 1.93 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8dd8d9e-1dc9-4fad-891c-68a134781bf3/@@download/cross_correlation_plot/ENCFF002DHL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB308HZV richard-myers:SL22154 ENCFF002DHL HiSeq 2000 2016-09-01T17:39:24.425288+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VV480369Gv3z1jv33VzjF ENCSR331HPA https://www.encodeproject.org/experiments/ENCSR331HPA transcription factor GABPA-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF178WGW https://www.encodeproject.org/files/ENCFF178WGW/@@download/ENCFF178WGW.bam ENCFF806SMA https://www.encodeproject.org/files/ENCFF806SMA/@@download/ENCFF806SMA.bam 31.2 M 0 26.2 M 0.840 SE 50 50 native 0.0 M 22.1 M 19.2 M 0.617 0.88 0.89 9.60 145 1.34 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c1e37f9-1489-4846-b303-b319e7cc380b/@@download/cross_correlation_plot/ENCFF002DHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB602THJ richard-myers:SL22757 ENCFF002DHM HiSeq 2000 2016-09-01T17:40:15.770206+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VV6j0369FZ7JXp832p89g ENCSR000BGY https://www.encodeproject.org/experiments/ENCSR000BGY transcription factor IRF4-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF240MQI https://www.encodeproject.org/files/ENCFF240MQI/@@download/ENCFF240MQI.bam ENCFF028SCM https://www.encodeproject.org/files/ENCFF028SCM/@@download/ENCFF028SCM.bam 24.8 M 0 18.6 M 0.750 SE 36 36 native 0.0 M 13.2 M 12.9 M 0.520 0.98 0.98 44.91 135 1.14 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/5149dbf5-f8a4-4f86-a611-9e93b8e9a17e/@@download/cross_correlation_plot/ENCFF000NWT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDU richard-myers:SL838 ENCFF000NWT Illumina Genome Analyzer IIx 2016-12-10T21:17:11.065477+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1636Xj036993F1b953B4Q0X ENCSR000BGY https://www.encodeproject.org/experiments/ENCSR000BGY transcription factor IRF4-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF888PAI https://www.encodeproject.org/files/ENCFF888PAI/@@download/ENCFF888PAI.bam ENCFF358CPI https://www.encodeproject.org/files/ENCFF358CPI/@@download/ENCFF358CPI.bam 28.3 M 0 21.7 M 0.766 SE 36 36 native 0.0 M 15.5 M 15.1 M 0.535 0.98 0.98 75.81 150 1.18 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/dff86736-43a0-4e8d-95fa-fc9b331839d4/@@download/cross_correlation_plot/ENCFF000NWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDT richard-myers:SL951 ENCFF000NWV Illumina Genome Analyzer IIx 2016-12-10T21:36:54.824094+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1636gQ03693J2XX63yZ7Bxv ENCSR897MMC https://www.encodeproject.org/experiments/ENCSR897MMC transcription factor JUNB-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF465ZPQ https://www.encodeproject.org/files/ENCFF465ZPQ/@@download/ENCFF465ZPQ.bam ENCFF572AQI https://www.encodeproject.org/files/ENCFF572AQI/@@download/ENCFF572AQI.bam 39.7 M 0 34.5 M 0.868 SE 50 50 native 0.0 M 29.4 M 24.5 M 0.618 0.85 0.85 6.73 140 1.19 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/877c0df6-1ad2-4c35-9118-a16ae4521368/@@download/cross_correlation_plot/ENCFF379ZPU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB760IFH richard-myers:SL75684 ENCFF379ZPU HiSeq 2000 2016-10-09T17:01:25.330895+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6QFj0jv1qJ3fJpV1YPfB6 ENCSR897MMC https://www.encodeproject.org/experiments/ENCSR897MMC transcription factor JUNB-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF009WRQ https://www.encodeproject.org/files/ENCFF009WRQ/@@download/ENCFF009WRQ.bam ENCFF183GKO https://www.encodeproject.org/files/ENCFF183GKO/@@download/ENCFF183GKO.bam 32.4 M 0 29.8 M 0.920 SE 50 50 native 0.0 M 25.3 M 22.1 M 0.681 0.88 0.89 8.98 150 1.26 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/335338f5-c7cb-479d-b0f4-c146beaf40b9/@@download/cross_correlation_plot/ENCFF002XBK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB360KFC richard-myers:SL81100 ENCFF002XBK HiSeq 2000 2016-10-09T17:02:01.089537+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6QJQ0jv1VK5GXJx08X4XV ENCSR000BKB https://www.encodeproject.org/experiments/ENCSR000BKB transcription factor MEF2A-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF510YAI https://www.encodeproject.org/files/ENCFF510YAI/@@download/ENCFF510YAI.bam ENCFF105SCN https://www.encodeproject.org/files/ENCFF105SCN/@@download/ENCFF105SCN.bam 16.0 M 0 13.6 M 0.850 SE 36 36 native 0.0 M 10.9 M 8.0 M 0.500 0.74 0.73 3.46 135 1.55 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/637b2fb7-4223-46a3-a42b-b293c3f517a3/@@download/cross_correlation_plot/ENCFF000NXA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLY richard-myers:SL1425 ENCFF000NXA Illumina Genome Analyzer IIx 2016-12-11T03:01:02.381391+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Gjj03699Z3Y8493qbq2q ENCSR000BKB https://www.encodeproject.org/experiments/ENCSR000BKB transcription factor MEF2A-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF476CBG https://www.encodeproject.org/files/ENCFF476CBG/@@download/ENCFF476CBG.bam ENCFF405ENX https://www.encodeproject.org/files/ENCFF405ENX/@@download/ENCFF405ENX.bam 29.3 M 0 24.6 M 0.840 SE 36 36 native 0.0 M 19.4 M 11.3 M 0.384 0.58 0.54 1.85 140 1.40 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/eecc42db-3a8b-4ce1-9e1e-01cda8241ec5/@@download/cross_correlation_plot/ENCFF000NXC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLX richard-myers:SL1792 ENCFF000NXC Illumina Genome Analyzer IIx 2016-12-11T03:09:47.363043+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164GxQ03697yz601ypVJ3FK ENCSR000BNG https://www.encodeproject.org/experiments/ENCSR000BNG transcription factor MEF2C-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF191UHV https://www.encodeproject.org/files/ENCFF191UHV/@@download/ENCFF191UHV.bam ENCFF013EWV https://www.encodeproject.org/files/ENCFF013EWV/@@download/ENCFF013EWV.bam 22.0 M 0 13.5 M 0.613 SE 36 36 native 0.0 M 10.3 M 7.5 M 0.339 0.72 0.71 3.20 120 1.23 6.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/7917b89a-7f5b-43a3-bae8-d550de24dbc0/@@download/cross_correlation_plot/ENCFF000NXE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTD richard-myers:SL1654 ENCFF000NXE Illumina Genome Analyzer IIx 2016-12-11T03:54:33.998919+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16505003697yz601ypVJ3VG ENCSR000BNG https://www.encodeproject.org/experiments/ENCSR000BNG transcription factor MEF2C-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF665BAJ https://www.encodeproject.org/files/ENCFF665BAJ/@@download/ENCFF665BAJ.bam ENCFF575FBF https://www.encodeproject.org/files/ENCFF575FBF/@@download/ENCFF575FBF.bam 26.8 M 0 22.7 M 0.847 SE 36 36 native 0.0 M 17.5 M 14.3 M 0.533 0.81 0.85 6.69 140 1.18 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/77581572-c032-4d30-a251-a2725b29d066/@@download/cross_correlation_plot/ENCFF000NXJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEM richard-myers:SL2127 ENCFF000NXJ Illumina Genome Analyzer IIx 2016-12-11T04:00:23.412558+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16509Q0369BJyPz9fb9qY5f ENCSR000BRH https://www.encodeproject.org/experiments/ENCSR000BRH transcription factor MTA3-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF460FPN https://www.encodeproject.org/files/ENCFF460FPN/@@download/ENCFF460FPN.bam ENCFF817YQB https://www.encodeproject.org/files/ENCFF817YQB/@@download/ENCFF817YQB.bam 46.1 M 0 41.3 M 0.895 SE 36 36 native 0.0 M 31.6 M 30.3 M 0.659 0.97 0.97 40.08 100 1.05 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a0ed38a-fcc4-4149-84d5-56e39ba34b7f/@@download/cross_correlation_plot/ENCFF000NXS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXE richard-myers:SL7899 ENCFF000NXS Illumina Genome Analyzer IIx 2016-12-11T03:40:04.513898+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164QF80369KQ3Yk1yz1kgQz ENCSR000BRH https://www.encodeproject.org/experiments/ENCSR000BRH transcription factor MTA3-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF682HUS https://www.encodeproject.org/files/ENCFF682HUS/@@download/ENCFF682HUS.bam ENCFF310HBV https://www.encodeproject.org/files/ENCFF310HBV/@@download/ENCFF310HBV.bam 50.4 M 0 42.8 M 0.848 SE 36 36 native 0.0 M 32.5 M 30.7 M 0.608 0.96 0.97 35.90 120 1.11 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/5df05692-f911-4be9-bc0a-fb78386dc5bd/@@download/cross_correlation_plot/ENCFF000NXT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBF richard-myers:SL8129 ENCFF000NXT Illumina Genome Analyzer IIx 2016-12-11T03:41:37.272507+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164QPj03697yz601ypVJ3GX ENCSR000BQL https://www.encodeproject.org/experiments/ENCSR000BQL transcription factor NFATC1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF207QTV https://www.encodeproject.org/files/ENCFF207QTV/@@download/ENCFF207QTV.bam ENCFF414CDS https://www.encodeproject.org/files/ENCFF414CDS/@@download/ENCFF414CDS.bam 47.1 M 0 37.9 M 0.803 SE 36 36 native 0.0 M 29.2 M 26.7 M 0.567 0.93 0.95 26.01 110 1.06 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/9293595e-44ac-4af8-a763-944eb88161a6/@@download/cross_correlation_plot/ENCFF000NYB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXS richard-myers:SL7280 ENCFF000NYB Illumina Genome Analyzer IIx 2016-12-11T03:34:38.154315+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164K2803697K4B1J71py01G ENCSR000BQL https://www.encodeproject.org/experiments/ENCSR000BQL transcription factor NFATC1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF983YCI https://www.encodeproject.org/files/ENCFF983YCI/@@download/ENCFF983YCI.bam ENCFF922QNO https://www.encodeproject.org/files/ENCFF922QNO/@@download/ENCFF922QNO.bam 41.1 M 0 33.8 M 0.822 SE 36 36 native 0.0 M 26.1 M 23.7 M 0.576 0.92 0.94 19.64 130 1.07 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/122b821d-5c3f-4d73-a749-33e932b5dad6/@@download/cross_correlation_plot/ENCFF000NXW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGW richard-myers:SL7830 ENCFF000NXW Illumina Genome Analyzer IIx 2016-12-11T03:29:20.182888+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164K7Q03693JQ1ZJ95zxGqB ENCSR000BRN https://www.encodeproject.org/experiments/ENCSR000BRN transcription factor NFIC-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF838XZA https://www.encodeproject.org/files/ENCFF838XZA/@@download/ENCFF838XZA.bam ENCFF377QYQ https://www.encodeproject.org/files/ENCFF377QYQ/@@download/ENCFF377QYQ.bam 36.4 M 0 29.1 M 0.799 SE 36 36 native 0.0 M 22.8 M 18.7 M 0.514 0.85 0.85 6.83 145 1.33 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3a8d223-e51f-4cb0-875c-9c264e92c7c0/@@download/cross_correlation_plot/ENCFF000NYH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCK richard-myers:SL8083 ENCFF000NYH Illumina Genome Analyzer IIx 2016-12-11T04:02:28.145747+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164y880369BJyPz9fb9qY54 ENCSR000BRN https://www.encodeproject.org/experiments/ENCSR000BRN transcription factor NFIC-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF261PTK https://www.encodeproject.org/files/ENCFF261PTK/@@download/ENCFF261PTK.bam ENCFF512SGQ https://www.encodeproject.org/files/ENCFF512SGQ/@@download/ENCFF512SGQ.bam 31.3 M 0 27.6 M 0.882 SE 36 36 native 0.0 M 21.9 M 17.0 M 0.542 0.80 0.81 5.46 150 1.12 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/79e23bb4-2633-47b6-962b-d0e96f07be53/@@download/cross_correlation_plot/ENCFF000NYJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCJ richard-myers:SL8392 ENCFF000NYJ Illumina Genome Analyzer IIx 2016-12-11T04:01:24.162153+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164yGQ0369GF0YB1zjPf6jx ENCSR000BHD https://www.encodeproject.org/experiments/ENCSR000BHD transcription factor PAX5-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF018FQW https://www.encodeproject.org/files/ENCFF018FQW/@@download/ENCFF018FQW.bam ENCFF052ZVD https://www.encodeproject.org/files/ENCFF052ZVD/@@download/ENCFF052ZVD.bam 20.8 M 0 16.7 M 0.805 SE 36 36 native 0.0 M 11.7 M 11.3 M 0.544 0.97 0.97 31.58 100 1.30 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/47a6180a-3db0-4ab1-8d5c-7a8cb98f9a4d/@@download/cross_correlation_plot/ENCFF000NZO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYC richard-myers:SL675 ENCFF000NZO Illumina Genome Analyzer IIx 2016-12-11T03:42:16.200345+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164p0Q03697yz601ypVJ3PQ ENCSR000BHD https://www.encodeproject.org/experiments/ENCSR000BHD transcription factor PAX5-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF275TPO https://www.encodeproject.org/files/ENCFF275TPO/@@download/ENCFF275TPO.bam ENCFF491WYR https://www.encodeproject.org/files/ENCFF491WYR/@@download/ENCFF491WYR.bam 36.8 M 0 20.0 M 0.545 SE 36 36 native 0.0 M 13.2 M 10.4 M 0.284 0.79 0.75 3.22 110 1.33 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/788d6433-1ad7-433e-bc48-1958c063a4d2/@@download/cross_correlation_plot/ENCFF000NZQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNP richard-myers:SL735 ENCFF000NZQ Illumina Genome Analyzer IIx 2016-12-11T03:56:32.606685+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164p5003692yykb1zBpz7j7 ENCSR000BHJ https://www.encodeproject.org/experiments/ENCSR000BHJ transcription factor PAX5-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF614SHU https://www.encodeproject.org/files/ENCFF614SHU/@@download/ENCFF614SHU.bam ENCFF857OQO https://www.encodeproject.org/files/ENCFF857OQO/@@download/ENCFF857OQO.bam 30.6 M 0 15.1 M 0.493 SE 36 36 native 0.0 M 9.5 M 9.3 M 0.303 0.98 0.98 43.62 95 1.23 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/da8d410e-d9bb-4778-90c7-3a54663ab33b/@@download/cross_correlation_plot/ENCFF000NZS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEN richard-myers:SL677 ENCFF000NZS Illumina Genome Analyzer IIx 2016-12-11T02:21:23.219428+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163v2003697K4B1J71pxzvJ ENCSR000BHJ https://www.encodeproject.org/experiments/ENCSR000BHJ transcription factor PAX5-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF475VQL https://www.encodeproject.org/files/ENCFF475VQL/@@download/ENCFF475VQL.bam ENCFF406HIQ https://www.encodeproject.org/files/ENCFF406HIQ/@@download/ENCFF406HIQ.bam 43.6 M 0 28.5 M 0.654 SE 36 36 native 0.0 M 19.5 M 18.8 M 0.432 0.97 0.97 41.82 140 1.20 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7101e6f-60e3-4eb3-a8e8-05fd12b4e0c3/@@download/cross_correlation_plot/ENCFF000NZX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUO richard-myers:SL848 ENCFF000NZX Illumina Genome Analyzer IIx 2016-12-11T02:43:36.000998+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163v6Q036969X0jJ6p3ffjF ENCSR000BGR https://www.encodeproject.org/experiments/ENCSR000BGR transcription factor PBX3-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF791EPM https://www.encodeproject.org/files/ENCFF791EPM/@@download/ENCFF791EPM.bam ENCFF558OGS https://www.encodeproject.org/files/ENCFF558OGS/@@download/ENCFF558OGS.bam 27.2 M 0 20.4 M 0.750 SE 36 36 native 0.0 M 14.8 M 11.8 M 0.434 0.80 0.80 4.78 90 1.23 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/5343e8eb-8faf-4767-b6ec-f0a539a0aeea/@@download/cross_correlation_plot/ENCFF000OAD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMP richard-myers:SL615 ENCFF000OAD Illumina Genome Analyzer IIx 2016-12-12T17:17:20.496004+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1624j80369Bxb30J6x5bYxZ ENCSR000BGR https://www.encodeproject.org/experiments/ENCSR000BGR transcription factor PBX3-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF845MYC https://www.encodeproject.org/files/ENCFF845MYC/@@download/ENCFF845MYC.bam ENCFF389MHG https://www.encodeproject.org/files/ENCFF389MHG/@@download/ENCFF389MHG.bam 31.2 M 0 21.9 M 0.702 SE 36 36 native 0.0 M 15.6 M 14.1 M 0.453 0.91 0.94 19.77 95 1.52 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/faf6c920-06c1-48f6-bdb5-b3cb7f3157df/@@download/cross_correlation_plot/ENCFF000OAF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMQ richard-myers:SL647 ENCFF000OAF Illumina Genome Analyzer IIx 2016-12-12T17:17:42.238301+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1624vQ03697K4B1J71pxzKy ENCSR000BQM https://www.encodeproject.org/experiments/ENCSR000BQM transcription factor PML-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF027NKU https://www.encodeproject.org/files/ENCFF027NKU/@@download/ENCFF027NKU.bam ENCFF240JDE https://www.encodeproject.org/files/ENCFF240JDE/@@download/ENCFF240JDE.bam 41.6 M 0 32.9 M 0.790 SE 36 36 native 0.0 M 25.6 M 23.4 M 0.563 0.93 0.94 20.16 120 1.08 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/35fcfb5d-6e37-49c5-a7c4-95d9c4bead6c/@@download/cross_correlation_plot/ENCFF000OAL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGS richard-myers:SL7281 ENCFF000OAL Illumina Genome Analyzer IIx 2016-12-11T04:53:58.206084+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1660jQ03692f1gp513PxgVB ENCSR000BQM https://www.encodeproject.org/experiments/ENCSR000BQM transcription factor PML-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF792HYP https://www.encodeproject.org/files/ENCFF792HYP/@@download/ENCFF792HYP.bam ENCFF523PRJ https://www.encodeproject.org/files/ENCFF523PRJ/@@download/ENCFF523PRJ.bam 41.1 M 0 33.0 M 0.803 SE 36 36 native 0.0 M 25.0 M 22.7 M 0.552 0.92 0.93 15.51 140 1.12 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/44add0f0-bff5-410e-a1e3-3310a33cd07d/@@download/cross_correlation_plot/ENCFF000OAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGT richard-myers:SL7831 ENCFF000OAN Illumina Genome Analyzer IIx 2016-12-11T04:54:23.835958+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1660xj0369BJyPz9fb9qYPY ENCSR000BGD https://www.encodeproject.org/experiments/ENCSR000BGD transcription factor POLR2A-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF418NDO https://www.encodeproject.org/files/ENCFF418NDO/@@download/ENCFF418NDO.bam ENCFF668XIT https://www.encodeproject.org/files/ENCFF668XIT/@@download/ENCFF668XIT.bam 54.6 M 0 38.1 M 0.698 SE 36 25 25 0.0 M 24.7 M 20.1 M 0.368 0.81 0.87 10.62 90 2.43 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/e1cce1be-bf4d-4a80-8d15-0d7399fda8a2/@@download/cross_correlation_plot/ENCFF000OBB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUB richard-myers:SL207 ENCFF000OBB Illumina Genome Analyzer IIx 2017-01-05T00:22:40.364644+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1ffvXj03697J9fxG4f90fX9 ENCSR000BGD https://www.encodeproject.org/experiments/ENCSR000BGD transcription factor POLR2A-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF036AWP https://www.encodeproject.org/files/ENCFF036AWP/@@download/ENCFF036AWP.bam ENCFF795DHE https://www.encodeproject.org/files/ENCFF795DHE/@@download/ENCFF795DHE.bam 63.7 M 0 40.7 M 0.638 SE 36 25 25 0.0 M 25.8 M 21.0 M 0.329 0.82 0.88 10.97 80 2.43 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd90c0a9-1ca4-4626-a672-97d4664f42f7/@@download/cross_correlation_plot/ENCFF000OBE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUC richard-myers:SL209 ENCFF000OBE Illumina Genome Analyzer IIx 2017-01-05T00:25:00.309004+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1ffvj80369BjXJg2ZYfgj1Z ENCSR000BIF https://www.encodeproject.org/experiments/ENCSR000BIF "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF579AOQ https://www.encodeproject.org/files/ENCFF579AOQ/@@download/ENCFF579AOQ.bam ENCFF996YTS https://www.encodeproject.org/files/ENCFF996YTS/@@download/ENCFF996YTS.bam 43.8 M 0 33.3 M 0.761 SE 36 36 native 0.0 M 24.6 M 20.2 M 0.461 0.82 0.83 5.84 120 1.28 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e3ad5ec-f020-4a89-9fb9-3e7b254c8e33/@@download/cross_correlation_plot/ENCFF000OAU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJQ richard-myers:SL748 ENCFF000OAU Illumina Genome Analyzer IIx 2016-12-10T20:55:30.344704+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162j1Q0369Bxb30J6x5bZ1y ENCSR000BIF https://www.encodeproject.org/experiments/ENCSR000BIF "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF584LIV https://www.encodeproject.org/files/ENCFF584LIV/@@download/ENCFF584LIV.bam ENCFF349ZII https://www.encodeproject.org/files/ENCFF349ZII/@@download/ENCFF349ZII.bam 45.2 M 0 29.7 M 0.656 SE 36 36 native 0.0 M 21.8 M 20.1 M 0.446 0.93 0.94 21.73 135 1.47 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa6eaee9-7db8-4600-a874-b69c9b61add8/@@download/cross_correlation_plot/ENCFF000OAS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXD richard-myers:SL847 ENCFF000OAS HiSeq 2000 2016-12-10T20:54:50.271821+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162j6j0369KbxV61z4GFv66 ENCSR000BGP https://www.encodeproject.org/experiments/ENCSR000BGP transcription factor POU2F2-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF381SOT https://www.encodeproject.org/files/ENCFF381SOT/@@download/ENCFF381SOT.bam ENCFF283IEJ https://www.encodeproject.org/files/ENCFF283IEJ/@@download/ENCFF283IEJ.bam 39.9 M 0 29.0 M 0.729 SE 36 36 native 0.0 M 20.8 M 18.2 M 0.456 0.87 0.87 7.82 90 1.14 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d2f61f6-f02e-4c43-996a-53099d393740/@@download/cross_correlation_plot/ENCFF000OBK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAA richard-myers:SL614 ENCFF000OBK Illumina Genome Analyzer IIx 2016-12-10T21:02:38.924273+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162qXQ0369F4yf5544b18f2 ENCSR000BGP https://www.encodeproject.org/experiments/ENCSR000BGP transcription factor POU2F2-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF376YKR https://www.encodeproject.org/files/ENCFF376YKR/@@download/ENCFF376YKR.bam ENCFF802KKW https://www.encodeproject.org/files/ENCFF802KKW/@@download/ENCFF802KKW.bam 68.8 M 0 52.3 M 0.761 SE 36 36 native 0.0 M 37.3 M 33.6 M 0.488 0.92 0.92 12.66 105 1.14 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/ea4cb0fc-20c2-4614-b5d9-3963cb648c44/@@download/cross_correlation_plot/ENCFF000OBP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAC richard-myers:SL648 ENCFF000OBP Illumina Genome Analyzer IIx 2016-12-10T21:53:58.241466+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162qg803697vfpg2qKbyZ8J ENCSR000BGP https://www.encodeproject.org/experiments/ENCSR000BGP transcription factor POU2F2-human GM12878 immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF928AKT https://www.encodeproject.org/files/ENCFF928AKT/@@download/ENCFF928AKT.bam ENCFF007KDG https://www.encodeproject.org/files/ENCFF007KDG/@@download/ENCFF007KDG.bam 21.9 M 0 18.3 M 0.836 SE 36 36 native 0.0 M 13.0 M 12.6 M 0.574 0.96 0.97 29.84 125 1.16 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/f0c1554b-b032-4185-8337-ff2fcc06a180/@@download/cross_correlation_plot/ENCFF000OBH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAB richard-myers:SL851 ENCFF000OBH Illumina Genome Analyzer IIx 2016-12-10T20:41:12.322300+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162qxQ036933PVVJ7Qq0187 ENCSR000BMY https://www.encodeproject.org/experiments/ENCSR000BMY transcription factor RAD21-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF545ETC https://www.encodeproject.org/files/ENCFF545ETC/@@download/ENCFF545ETC.bam ENCFF901DWV https://www.encodeproject.org/files/ENCFF901DWV/@@download/ENCFF901DWV.bam 15.7 M 0 14.0 M 0.888 SE 36 36 native 0.0 M 11.1 M 8.8 M 0.562 0.80 0.80 5.11 100 2.92 2.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/b045740a-df18-4fb6-90bb-ad79ed858650/@@download/cross_correlation_plot/ENCFF000OCE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQZ richard-myers:SL3933 ENCFF000OCE Illumina Genome Analyzer IIx 2016-12-11T03:13:43.709908+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Yx803699K237J9jY9kxF ENCSR000BMY https://www.encodeproject.org/experiments/ENCSR000BMY transcription factor RAD21-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF310ZIS https://www.encodeproject.org/files/ENCFF310ZIS/@@download/ENCFF310ZIS.bam ENCFF175RHE https://www.encodeproject.org/files/ENCFF175RHE/@@download/ENCFF175RHE.bam 30.0 M 0 26.0 M 0.866 SE 36 36 native 0.0 M 21.1 M 11.9 M 0.397 0.57 0.55 2.04 105 3.09 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/1dc99513-36fb-4b68-b4ee-2f3a6fe4efcc/@@download/cross_correlation_plot/ENCFF000OCH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEP richard-myers:SL3934 ENCFF000OCH Illumina Genome Analyzer IIx 2016-12-11T03:25:55.438001+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Z2003692f1gp513PxgKp ENCSR000BGF https://www.encodeproject.org/experiments/ENCSR000BGF "transcription factor,chromatin remodeller" REST-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF876KTI https://www.encodeproject.org/files/ENCFF876KTI/@@download/ENCFF876KTI.bam ENCFF540RBQ https://www.encodeproject.org/files/ENCFF540RBQ/@@download/ENCFF540RBQ.bam 59.7 M 0 23.4 M 0.391 SE 32 25 25 0.0 M 13.7 M 11.9 M 0.199 0.86 0.93 18.42 80 1.74 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/653f2a56-23c6-4822-ae9e-46bfbf5315fe/@@download/cross_correlation_plot/ENCFF000NZA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPS richard-myers:SL202 ENCFF000NZA Illumina Genome Analyzer IIx 2016-12-13T04:05:15.232730+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zx9Q03696z7JqGk4Z07F2 ENCSR000BGF https://www.encodeproject.org/experiments/ENCSR000BGF "transcription factor,chromatin remodeller" REST-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF455QSR https://www.encodeproject.org/files/ENCFF455QSR/@@download/ENCFF455QSR.bam ENCFF941DAK https://www.encodeproject.org/files/ENCFF941DAK/@@download/ENCFF941DAK.bam 38.1 M 0 19.1 M 0.503 SE 36 25 25 0.0 M 10.8 M 9.7 M 0.254 0.89 0.95 24.04 75 1.73 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5ac3920-1325-4afc-b8f5-b06032c716a5/@@download/cross_correlation_plot/ENCFF000NYY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPT richard-myers:SL204 ENCFF000NYY Illumina Genome Analyzer IIx 2016-12-13T03:43:34.024041+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZyvQ03690xXYVJ7Fj2x69 ENCSR000BQS https://www.encodeproject.org/experiments/ENCSR000BQS "transcription factor,chromatin remodeller" REST-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF894EID https://www.encodeproject.org/files/ENCFF894EID/@@download/ENCFF894EID.bam ENCFF471UKN https://www.encodeproject.org/files/ENCFF471UKN/@@download/ENCFF471UKN.bam 17.0 M 0 14.7 M 0.862 SE 36 36 native 0.0 M 10.6 M 9.8 M 0.578 0.93 0.95 22.41 145 1.71 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/e110796a-005e-4a94-a72e-b9e90c0ab6f9/@@download/cross_correlation_plot/ENCFF000NYK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIU richard-myers:SL852 ENCFF000NYK Illumina Genome Analyzer IIx 2016-12-11T02:05:25.622702+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163pg0036933PVVJ7Qq01P2 ENCSR000BQS https://www.encodeproject.org/experiments/ENCSR000BQS "transcription factor,chromatin remodeller" REST-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF569QEN https://www.encodeproject.org/files/ENCFF569QEN/@@download/ENCFF569QEN.bam ENCFF407MEC https://www.encodeproject.org/files/ENCFF407MEC/@@download/ENCFF407MEC.bam 28.4 M 0 19.9 M 0.701 SE 36 36 native 0.0 M 15.4 M 12.4 M 0.436 0.84 0.84 6.45 95 1.19 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/a557b7a7-6854-4611-8c8b-358b51d28679/@@download/cross_correlation_plot/ENCFF000NYN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIT richard-myers:SL7333 ENCFF000NYN Illumina Genome Analyzer IIx 2016-12-11T02:21:15.296772+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163pvQ0369BV55708G9qbQV ENCSR000BRI https://www.encodeproject.org/experiments/ENCSR000BRI transcription factor RUNX3-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF579PRC https://www.encodeproject.org/files/ENCFF579PRC/@@download/ENCFF579PRC.bam ENCFF038MRS https://www.encodeproject.org/files/ENCFF038MRS/@@download/ENCFF038MRS.bam 47.1 M 0 41.8 M 0.888 SE 36 36 native 0.0 M 33.9 M 29.8 M 0.633 0.90 0.92 15.22 120 1.78 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e49a817-ae04-4e63-9933-841cb64f5d62/@@download/cross_correlation_plot/ENCFF000OCO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRY richard-myers:SL7898 ENCFF000OCO Illumina Genome Analyzer IIx 2016-12-11T04:18:37.956234+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1656680369445BJJ915X9pp ENCSR000BRI https://www.encodeproject.org/experiments/ENCSR000BRI transcription factor RUNX3-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF884LEJ https://www.encodeproject.org/files/ENCFF884LEJ/@@download/ENCFF884LEJ.bam ENCFF405AFR https://www.encodeproject.org/files/ENCFF405AFR/@@download/ENCFF405AFR.bam 50.3 M 0 43.2 M 0.859 SE 36 36 native 0.0 M 32.9 M 30.0 M 0.595 0.93 0.94 21.24 115 1.55 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/af29de02-3773-4b7c-96bd-9afdc94090f1/@@download/cross_correlation_plot/ENCFF000OCP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJD richard-myers:SL8128 ENCFF000OCP Illumina Genome Analyzer IIx 2016-12-11T04:21:16.994218+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1656F00369BJyPz9fb9qY7g ENCSR000BJD https://www.encodeproject.org/experiments/ENCSR000BJD transcription factor RXRA-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF713PKK https://www.encodeproject.org/files/ENCFF713PKK/@@download/ENCFF713PKK.bam ENCFF125QGK https://www.encodeproject.org/files/ENCFF125QGK/@@download/ENCFF125QGK.bam 33.4 M 0 22.9 M 0.685 SE 36 36 native 0.0 M 17.5 M 7.1 M 0.212 0.41 0.31 1.10 130 1.40 11.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/e19bd048-e05f-4a81-9048-a2320d664495/@@download/cross_correlation_plot/ENCFF000OEH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEZ richard-myers:SL1063 ENCFF000OEH Illumina Genome Analyzer IIx 2016-12-10T22:08:31.644397+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Bv803695yqvv8q311QFV ENCSR000BJD https://www.encodeproject.org/experiments/ENCSR000BJD transcription factor RXRA-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF924KUA https://www.encodeproject.org/files/ENCFF924KUA/@@download/ENCFF924KUA.bam ENCFF292CKM https://www.encodeproject.org/files/ENCFF292CKM/@@download/ENCFF292CKM.bam 32.6 M 0 23.7 M 0.727 SE 36 36 native 0.0 M 18.0 M 8.3 M 0.254 0.46 0.40 1.39 120 1.37 14.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/b17094cf-2df4-4264-9cbb-73a4ae47e7b7/@@download/cross_correlation_plot/ENCFF000OEJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFA richard-myers:SL1265 ENCFF000OEJ Illumina Genome Analyzer IIx 2016-12-10T22:13:29.750872+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163F1803699Z3Y8493qbppz ENCSR000BJE https://www.encodeproject.org/experiments/ENCSR000BJE transcription factor SIX5-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF971KJA https://www.encodeproject.org/files/ENCFF971KJA/@@download/ENCFF971KJA.bam ENCFF561EJD https://www.encodeproject.org/files/ENCFF561EJD/@@download/ENCFF561EJD.bam 46.1 M 0 28.9 M 0.628 SE 36 36 native 0.0 M 22.0 M 11.4 M 0.248 0.52 0.49 1.68 110 1.63 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9080434-07cb-4271-8c75-ff2c40892b18/@@download/cross_correlation_plot/ENCFF000OEQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSS richard-myers:SL1061 ENCFF000OEQ Illumina Genome Analyzer IIx 2016-12-10T20:49:40.052742+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162jG8036933PVVJ7Qq0171 ENCSR000BJE https://www.encodeproject.org/experiments/ENCSR000BJE transcription factor SIX5-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF707RRY https://www.encodeproject.org/files/ENCFF707RRY/@@download/ENCFF707RRY.bam ENCFF915GLM https://www.encodeproject.org/files/ENCFF915GLM/@@download/ENCFF915GLM.bam 36.9 M 0 27.5 M 0.746 SE 36 36 native 0.0 M 21.0 M 10.7 M 0.290 0.51 0.52 1.78 140 1.33 3.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/2406e8a3-4438-4e96-ba11-441203cb3e7d/@@download/cross_correlation_plot/ENCFF000OEP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JST richard-myers:SL1200 ENCFF000OEP Illumina Genome Analyzer IIx 2016-12-10T20:45:13.358198+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162jVQ036933PVVJ7Qq017B ENCSR251OVJ https://www.encodeproject.org/experiments/ENCSR251OVJ transcription factor SMAD5-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF346SPJ https://www.encodeproject.org/files/ENCFF346SPJ/@@download/ENCFF346SPJ.bam ENCFF132CNC https://www.encodeproject.org/files/ENCFF132CNC/@@download/ENCFF132CNC.bam 25.8 M 0 21.7 M 0.840 SE 50 50 native 0.0 M 18.4 M 16.7 M 0.648 0.91 0.91 11.66 120 1.10 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ab0c842-ccb0-4c03-9166-29dc6fd0c508/@@download/cross_correlation_plot/ENCFF659AFH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB395ZVO richard-myers:SL26628 ENCFF659AFH HiSeq 2000 2016-10-09T17:05:30.012104+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3q180jv1XvFGkBjjfjQ0G ENCSR251OVJ https://www.encodeproject.org/experiments/ENCSR251OVJ transcription factor SMAD5-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF386SPJ https://www.encodeproject.org/files/ENCFF386SPJ/@@download/ENCFF386SPJ.bam ENCFF117EYR https://www.encodeproject.org/files/ENCFF117EYR/@@download/ENCFF117EYR.bam 38.7 M 0 36.5 M 0.944 SE 50 50 native 0.0 M 30.1 M 27.8 M 0.719 0.93 0.94 18.30 90 1.04 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c817137-87a2-410b-8fbb-c71e50af3934/@@download/cross_correlation_plot/ENCFF944THM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB736IVL richard-myers:SL41839 ENCFF944THM HiSeq 2000 2016-10-09T17:06:09.174944+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3q2j0jv1zBYbxYJ5zzz07 ENCSR000BHK https://www.encodeproject.org/experiments/ENCSR000BHK transcription factor SP1-human GM12878 immortalized cell line richard-myers ENCODE2 pending SE 36 Illumina Genome Analyzer IIx requires lab review ENCSR000BGQ https://www.encodeproject.org/experiments/ENCSR000BGQ transcription factor SPI1-human GM12878 immortalized cell line richard-myers ENCODE2 pending SE 36 Illumina Genome Analyzer IIx requires lab review ENCSR000BGE https://www.encodeproject.org/experiments/ENCSR000BGE transcription factor SRF-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF731ZNW https://www.encodeproject.org/files/ENCFF731ZNW/@@download/ENCFF731ZNW.bam ENCFF387WBW https://www.encodeproject.org/files/ENCFF387WBW/@@download/ENCFF387WBW.bam 65.8 M 0 35.3 M 0.537 SE 36 25 25 0.0 M 17.7 M 16.2 M 0.246 0.91 0.92 12.07 80 1.12 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ec405b0-5bf7-4bcc-a47e-ab7770260d4f/@@download/cross_correlation_plot/ENCFF000OFM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCI richard-myers:SL291 ENCFF000OFM Illumina Genome Analyzer IIx 2016-12-13T04:38:25.594748+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zvk803698ZxQY8q63XPVP ENCSR000BGE https://www.encodeproject.org/experiments/ENCSR000BGE transcription factor SRF-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF263NOT https://www.encodeproject.org/files/ENCFF263NOT/@@download/ENCFF263NOT.bam ENCFF323SHI https://www.encodeproject.org/files/ENCFF323SHI/@@download/ENCFF323SHI.bam 60.4 M 0 32.7 M 0.542 SE 36 25 25 0.0 M 17.8 M 16.1 M 0.266 0.90 0.91 12.18 80 1.17 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/64eaf7bf-4bf9-430c-8051-de4fe0ca1a61/@@download/cross_correlation_plot/ENCFF000OFK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDT richard-myers:SL292 ENCFF000OFK Illumina Genome Analyzer IIx 2016-12-13T04:15:58.752041+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxBQ03697K4B1J71py8X0 ENCSR000BMI https://www.encodeproject.org/experiments/ENCSR000BMI transcription factor SRF-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF988NFK https://www.encodeproject.org/files/ENCFF988NFK/@@download/ENCFF988NFK.bam ENCFF987KGX https://www.encodeproject.org/files/ENCFF987KGX/@@download/ENCFF987KGX.bam 26.1 M 0 22.7 M 0.871 SE 36 36 native 0.0 M 16.7 M 9.4 M 0.361 0.57 0.53 1.88 110 1.41 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/56cff82d-8734-4de5-9d13-84a24e5ec401/@@download/cross_correlation_plot/ENCFF000OFJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDR richard-myers:SL3578 ENCFF000OFJ Illumina Genome Analyzer IIx 2016-12-11T03:08:54.763356+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164JJQ0369KbxV61z4GFvBx ENCSR000BMI https://www.encodeproject.org/experiments/ENCSR000BMI transcription factor SRF-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF274NWP https://www.encodeproject.org/files/ENCFF274NWP/@@download/ENCFF274NWP.bam ENCFF549ZSD https://www.encodeproject.org/files/ENCFF549ZSD/@@download/ENCFF549ZSD.bam 37.8 M 0 26.7 M 0.705 SE 36 36 native 0.0 M 20.1 M 12.2 M 0.321 0.61 0.58 2.15 80 1.48 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec20a62b-9f19-41ff-a36c-e85d9b065baa/@@download/cross_correlation_plot/ENCFF000OFL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLH richard-myers:SL3827 ENCFF000OFL Illumina Genome Analyzer IIx 2016-12-11T03:17:21.424203+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164JXQ0369GF0YB1zjPf6YV ENCSR000BQZ https://www.encodeproject.org/experiments/ENCSR000BQZ transcription factor STAT5A-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF179ZBY https://www.encodeproject.org/files/ENCFF179ZBY/@@download/ENCFF179ZBY.bam ENCFF865OWT https://www.encodeproject.org/files/ENCFF865OWT/@@download/ENCFF865OWT.bam 39.6 M 0 35.2 M 0.890 SE 36 36 native 0.0 M 26.8 M 25.5 M 0.643 0.96 0.96 26.56 90 1.06 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/5063fe04-bec2-456a-b7dd-092ab3997db2/@@download/cross_correlation_plot/ENCFF000OFY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOV richard-myers:SL7897 ENCFF000OFY Illumina Genome Analyzer IIx 2016-12-11T06:45:42.674274+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Gp80369GF0YB1zjPf77p ENCSR000BQZ https://www.encodeproject.org/experiments/ENCSR000BQZ transcription factor STAT5A-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF870IWV https://www.encodeproject.org/files/ENCFF870IWV/@@download/ENCFF870IWV.bam ENCFF163IQH https://www.encodeproject.org/files/ENCFF163IQH/@@download/ENCFF163IQH.bam 44.6 M 0 37.3 M 0.837 SE 36 36 native 0.0 M 28.1 M 25.8 M 0.580 0.94 0.95 21.81 100 1.07 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ba0edc6-2370-433f-aabf-f1c6fceb3a20/@@download/cross_correlation_plot/ENCFF000OGA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOU richard-myers:SL8127 ENCFF000OGA Illumina Genome Analyzer IIx 2016-12-11T07:49:38.891616+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166J000369BJyPz9fb9qYYQ ENCSR000BGS https://www.encodeproject.org/experiments/ENCSR000BGS transcription factor TAF1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF575GRT https://www.encodeproject.org/files/ENCFF575GRT/@@download/ENCFF575GRT.bam ENCFF412ZRB https://www.encodeproject.org/files/ENCFF412ZRB/@@download/ENCFF412ZRB.bam 20.5 M 0 16.3 M 0.795 SE 36 36 native 0.0 M 11.6 M 11.2 M 0.544 0.96 0.96 27.42 105 1.14 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/fbec0590-8ae8-41b4-b510-7b9181369cf3/@@download/cross_correlation_plot/ENCFF000OGC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVP richard-myers:SL805 ENCFF000OGC Illumina Genome Analyzer IIx 2016-12-11T04:09:01.075087+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165F600369PvYp91zK1PxVb ENCSR000BGS https://www.encodeproject.org/experiments/ENCSR000BGS transcription factor TAF1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF177XDM https://www.encodeproject.org/files/ENCFF177XDM/@@download/ENCFF177XDM.bam ENCFF985XWE https://www.encodeproject.org/files/ENCFF985XWE/@@download/ENCFF985XWE.bam 32.3 M 0 26.9 M 0.832 SE 36 36 native 0.0 M 20.4 M 16.9 M 0.523 0.83 0.83 5.69 120 1.26 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6976ac2-27bf-41a2-8a78-ded91c066537/@@download/cross_correlation_plot/ENCFF000OGH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVO richard-myers:SL1062 ENCFF000OGH Illumina Genome Analyzer IIx 2016-12-11T04:14:20.541294+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165FFQ0369BJyPz9fb9qY9q ENCSR016UEH https://www.encodeproject.org/experiments/ENCSR016UEH "RNA binding protein,transcription factor" TARDBP-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF963FTZ https://www.encodeproject.org/files/ENCFF963FTZ/@@download/ENCFF963FTZ.bam ENCFF958XTI https://www.encodeproject.org/files/ENCFF958XTI/@@download/ENCFF958XTI.bam 26.1 M 0 24.8 M 0.952 SE 50 50 native 0.0 M 20.7 M 19.6 M 0.750 0.95 0.97 35.21 85 1.05 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/c379a971-f29f-404d-b949-6fced07d7b30/@@download/cross_correlation_plot/ENCFF697WPB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB357LFF richard-myers:SL41786 ENCFF697WPB HiSeq 2000 2016-10-26T16:26:26.884839+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0803z80369BqVfYq19ZB8YG ENCSR016UEH https://www.encodeproject.org/experiments/ENCSR016UEH "RNA binding protein,transcription factor" TARDBP-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF179SRP https://www.encodeproject.org/files/ENCFF179SRP/@@download/ENCFF179SRP.bam ENCFF633KZW https://www.encodeproject.org/files/ENCFF633KZW/@@download/ENCFF633KZW.bam 28.2 M 0 27.2 M 0.965 SE 50 50 native 0.0 M 22.1 M 20.9 M 0.738 0.95 0.96 33.73 85 1.05 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c5409dc-6731-4d45-89c7-817f80186f28/@@download/cross_correlation_plot/ENCFF002BFR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB293MKQ richard-myers:SL43821 ENCFF002BFR HiSeq 2000 2016-10-26T16:27:21.666392+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08044803699pQzk2JB6K7Q2 ENCSR000BGZ https://www.encodeproject.org/experiments/ENCSR000BGZ transcription factor TCF12-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF101LKK https://www.encodeproject.org/files/ENCFF101LKK/@@download/ENCFF101LKK.bam ENCFF136IUN https://www.encodeproject.org/files/ENCFF136IUN/@@download/ENCFF136IUN.bam 29.4 M 0 19.6 M 0.667 SE 36 36 native 0.0 M 14.1 M 11.3 M 0.382 0.80 0.79 4.63 100 1.55 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d4a6d64-ce3a-4bfd-b0f0-1683d99ff742/@@download/cross_correlation_plot/ENCFF000OGQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBB richard-myers:SL673 ENCFF000OGQ Illumina Genome Analyzer IIx 2016-12-11T03:05:50.927378+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Fkj0369BJyPz9fb9qY15 ENCSR000BGZ https://www.encodeproject.org/experiments/ENCSR000BGZ transcription factor TCF12-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF291PCM https://www.encodeproject.org/files/ENCFF291PCM/@@download/ENCFF291PCM.bam ENCFF713RPY https://www.encodeproject.org/files/ENCFF713RPY/@@download/ENCFF713RPY.bam 22.5 M 0 19.1 M 0.848 SE 36 36 native 0.0 M 13.7 M 13.2 M 0.589 0.97 0.97 34.09 85 1.27 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/c73e5bac-6c45-4eb9-8751-3cddbc6baf62/@@download/cross_correlation_plot/ENCFF000OGN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JAY richard-myers:SL1019 ENCFF000OGN Illumina Genome Analyzer IIx 2016-12-11T03:06:05.786487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Fy803693JQ1ZJ95zxGpz ENCSR000BQT https://www.encodeproject.org/experiments/ENCSR000BQT transcription factor TCF3-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF783AQJ https://www.encodeproject.org/files/ENCFF783AQJ/@@download/ENCFF783AQJ.bam ENCFF743IZF https://www.encodeproject.org/files/ENCFF743IZF/@@download/ENCFF743IZF.bam 19.2 M 0 9.3 M 0.485 SE 36 36 native 0.0 M 6.5 M 5.9 M 0.309 0.91 0.92 13.03 100 1.37 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/f000dbbd-af3c-44fc-a3eb-35dc03e4fc01/@@download/cross_correlation_plot/ENCFF000OGV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRI richard-myers:SL480 ENCFF000OGV Illumina Genome Analyzer IIx 2016-12-11T04:53:00.471071+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Ff00369PJ8BP63qf1Fqp ENCSR000BQT https://www.encodeproject.org/experiments/ENCSR000BQT transcription factor TCF3-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF782IDR https://www.encodeproject.org/files/ENCFF782IDR/@@download/ENCFF782IDR.bam ENCFF282LQN https://www.encodeproject.org/files/ENCFF282LQN/@@download/ENCFF282LQN.bam 33.1 M 0 21.6 M 0.653 SE 36 36 native 0.0 M 14.9 M 12.5 M 0.379 0.84 0.84 6.17 90 1.29 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/afd8e376-f623-47e7-9bf2-10533de1140e/@@download/cross_correlation_plot/ENCFF000OGY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRH richard-myers:SL633 ENCFF000OGY Illumina Genome Analyzer IIx 2016-12-11T04:59:29.831954+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166FqQ03695Kj1j8qPQgkjX ENCSR501DKS https://www.encodeproject.org/experiments/ENCSR501DKS transcription factor TCF7-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF662NBQ https://www.encodeproject.org/files/ENCFF662NBQ/@@download/ENCFF662NBQ.bam ENCFF171JQZ https://www.encodeproject.org/files/ENCFF171JQZ/@@download/ENCFF171JQZ.bam 33.9 M 0 32.0 M 0.943 SE 50 50 native 0.0 M 26.9 M 25.4 M 0.749 0.95 0.95 21.02 115 1.06 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4ec1aef-fa61-4210-8691-c5adda9fa81c/@@download/cross_correlation_plot/ENCFF932ZZU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB543BSE richard-myers:SL41787 ENCFF932ZZU HiSeq 2000 2016-10-26T16:27:35.392573+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0804980369BqVfYq19ZB8Yb ENCSR501DKS https://www.encodeproject.org/experiments/ENCSR501DKS transcription factor TCF7-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF698NSE https://www.encodeproject.org/files/ENCFF698NSE/@@download/ENCFF698NSE.bam ENCFF971HFA https://www.encodeproject.org/files/ENCFF971HFA/@@download/ENCFF971HFA.bam 26.0 M 0 25.0 M 0.961 SE 50 50 native 0.0 M 20.8 M 19.6 M 0.755 0.94 0.94 17.72 120 1.04 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2ffa989-42c3-4af9-bd24-c50f90ce452f/@@download/cross_correlation_plot/ENCFF002BFN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB259VMU richard-myers:SL44327 ENCFF002BFN HiSeq 2000 2016-10-09T17:09:09.577485+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0804Gj0369KxbFbzV9pvv93 ENCSR000BGI https://www.encodeproject.org/experiments/ENCSR000BGI transcription factor USF1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF074OYP https://www.encodeproject.org/files/ENCFF074OYP/@@download/ENCFF074OYP.bam ENCFF616RGW https://www.encodeproject.org/files/ENCFF616RGW/@@download/ENCFF616RGW.bam 42.1 M 0 23.6 M 0.562 SE 36 25 25 0.0 M 13.8 M 10.1 M 0.241 0.74 0.83 6.93 90 1.58 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/e616767c-fdca-4cba-82b9-7764b2c6d57c/@@download/cross_correlation_plot/ENCFF000OHD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMM richard-myers:SL448 ENCFF000OHD Illumina Genome Analyzer IIx 2016-12-13T03:44:03.994315+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zxpj03695Kj1j8qPQj0XJ ENCSR000BGI https://www.encodeproject.org/experiments/ENCSR000BGI transcription factor USF1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF737VAT https://www.encodeproject.org/files/ENCFF737VAT/@@download/ENCFF737VAT.bam ENCFF898NMW https://www.encodeproject.org/files/ENCFF898NMW/@@download/ENCFF898NMW.bam 16.6 M 0 14.0 M 0.845 SE 25 25 25 0.0 M 8.9 M 7.2 M 0.434 0.81 0.89 10.08 110 1.30 2.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/4fcc524b-bacd-4da7-994a-d6987d657f6b/@@download/cross_correlation_plot/ENCFF000OHN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JML richard-myers:SL483 ENCFF000OHN Illumina Genome Analyzer IIx 2016-12-13T03:23:02.410086+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zyk00369Bxb30J6x5bq71 ENCSR000BNP https://www.encodeproject.org/experiments/ENCSR000BNP transcription factor YY1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF289YVM https://www.encodeproject.org/files/ENCFF289YVM/@@download/ENCFF289YVM.bam ENCFF407NZY https://www.encodeproject.org/files/ENCFF407NZY/@@download/ENCFF407NZY.bam 24.5 M 0 21.7 M 0.883 SE 36 36 native 0.0 M 16.3 M 13.2 M 0.539 0.81 0.85 7.12 115 2.12 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/35f6e96f-66e2-40fa-b7fe-0c94ecb756f0/@@download/cross_correlation_plot/ENCFF000OHH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBU richard-myers:SL1475 ENCFF000OHH Illumina Genome Analyzer IIx 2016-12-11T02:10:44.305625+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163pGj03697K4B1J71pxzqg ENCSR000BNP https://www.encodeproject.org/experiments/ENCSR000BNP transcription factor YY1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF163HDB https://www.encodeproject.org/files/ENCFF163HDB/@@download/ENCFF163HDB.bam ENCFF363ZTA https://www.encodeproject.org/files/ENCFF363ZTA/@@download/ENCFF363ZTA.bam 28.4 M 0 23.9 M 0.840 SE 36 36 native 0.0 M 18.1 M 15.7 M 0.554 0.87 0.90 11.25 115 1.73 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/08984e11-6b7d-4e53-9d7e-582c4c5c8e32/@@download/cross_correlation_plot/ENCFF000OHO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBV richard-myers:SL2129 ENCFF000OHO Illumina Genome Analyzer IIx 2016-12-11T02:26:31.469342+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163pV8036933PVVJ7Qq01Kk ENCSR207PFI https://www.encodeproject.org/experiments/ENCSR207PFI transcription factor ZBED1-human GM12878 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF641VCR https://www.encodeproject.org/files/ENCFF641VCR/@@download/ENCFF641VCR.bam ENCFF287MOV https://www.encodeproject.org/files/ENCFF287MOV/@@download/ENCFF287MOV.bam 49.4 M 0 45.6 M 0.923 SE 50 50 native 0.0 M 37.9 M 35.7 M 0.722 0.95 0.95 22.26 90 1.06 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/137f9089-e819-42e1-b251-9099b8f18334/@@download/cross_correlation_plot/ENCFF204SCC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB385MGI richard-myers:SL27566 ENCFF204SCC HiSeq 2000 2016-10-09T17:05:28.286140+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4V380jv1vY92b0GYjVG7F ENCSR207PFI https://www.encodeproject.org/experiments/ENCSR207PFI transcription factor ZBED1-human GM12878 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF893PGF https://www.encodeproject.org/files/ENCFF893PGF/@@download/ENCFF893PGF.bam ENCFF147IJZ https://www.encodeproject.org/files/ENCFF147IJZ/@@download/ENCFF147IJZ.bam 31.1 M 0 29.0 M 0.931 SE 50 50 native 0.0 M 24.2 M 21.8 M 0.702 0.92 0.92 12.14 115 1.05 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae28ee7b-e6a4-4d23-a86c-b8a8c0f5be4a/@@download/cross_correlation_plot/ENCFF583BRM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB361YAG richard-myers:SL101257 ENCFF583BRM HiSeq 2000 2016-10-09T17:00:51.232274+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4V4j0jv1XvFGkBjjfjQk5 ENCSR000BHC https://www.encodeproject.org/experiments/ENCSR000BHC transcription factor ZBTB33-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF004PAV https://www.encodeproject.org/files/ENCFF004PAV/@@download/ENCFF004PAV.bam ENCFF772LSQ https://www.encodeproject.org/files/ENCFF772LSQ/@@download/ENCFF772LSQ.bam 26.7 M 0 19.7 M 0.737 SE 36 36 native 0.0 M 13.6 M 13.3 M 0.499 0.98 0.98 64.39 115 1.11 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/b356a4f3-47e6-4bb9-95fe-99ce819d7896/@@download/cross_correlation_plot/ENCFF000OHX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFX richard-myers:SL814 ENCFF000OHX Illumina Genome Analyzer IIx 2016-12-10T22:23:16.168562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Jz803698ZxQY8q63X82Y ENCSR000BHC https://www.encodeproject.org/experiments/ENCSR000BHC transcription factor ZBTB33-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF432KDE https://www.encodeproject.org/files/ENCFF432KDE/@@download/ENCFF432KDE.bam ENCFF166QSR https://www.encodeproject.org/files/ENCFF166QSR/@@download/ENCFF166QSR.bam 19.4 M 0 17.1 M 0.877 SE 36 36 native 0.0 M 12.3 M 12.0 M 0.616 0.98 0.98 62.61 130 1.10 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7ff2aaa-b99f-4cfc-b7b5-b9cde0d2063c/@@download/cross_correlation_plot/ENCFF000OHV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWJ richard-myers:SL923 ENCFF000OHV Illumina Genome Analyzer IIx 2016-12-10T22:13:02.083308+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163K3j0369GF0YB1zjPf6V9 ENCSR000BND https://www.encodeproject.org/experiments/ENCSR000BND transcription factor ZEB1-human GM12878 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF425FSK https://www.encodeproject.org/files/ENCFF425FSK/@@download/ENCFF425FSK.bam ENCFF039NYP https://www.encodeproject.org/files/ENCFF039NYP/@@download/ENCFF039NYP.bam 20.9 M 0 12.8 M 0.613 SE 36 36 native 0.0 M 9.3 M 5.0 M 0.239 0.54 0.52 1.97 130 1.22 3.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/aaf561e8-e75d-44fa-8674-230426cea7a0/@@download/cross_correlation_plot/ENCFF000OIB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFK richard-myers:SL2957 ENCFF000OIB Illumina Genome Analyzer IIx 2016-12-11T03:59:47.093192+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1654vj0369BgG8x1ygv1XB9 ENCSR000BND https://www.encodeproject.org/experiments/ENCSR000BND transcription factor ZEB1-human GM12878 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF582LPW https://www.encodeproject.org/files/ENCFF582LPW/@@download/ENCFF582LPW.bam ENCFF272BAG https://www.encodeproject.org/files/ENCFF272BAG/@@download/ENCFF272BAG.bam 27.1 M 0 22.1 M 0.817 SE 36 36 native 0.0 M 15.8 M 7.5 M 0.277 0.48 0.42 1.45 140 1.37 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/7cacab09-d058-418f-bdc8-1bd7f246cb0c/@@download/cross_correlation_plot/ENCFF000OIE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFL richard-myers:SL3254 ENCFF000OIE Illumina Genome Analyzer IIx 2016-12-11T04:01:22.631801+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1655180369PvYp91zK1PxPZ ENCSR000BIH https://www.encodeproject.org/experiments/ENCSR000BIH control Control-human GM12891 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF857FLV https://www.encodeproject.org/files/ENCFF857FLV/@@download/ENCFF857FLV.bam ENCFF962KBC https://www.encodeproject.org/files/ENCFF962KBC/@@download/ENCFF962KBC.bam 28.3 M 0 22.1 M 0.780 SE 36 36 native 0.0 M 15.0 M 14.4 M 0.511 0.97 0.98 99.46 125 1.03 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/48826953-49ca-443b-b08b-a3a17bd70e8a/@@download/cross_correlation_plot/ENCFF000OJU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVI richard-myers:SL817 ENCFF000OJU Illumina Genome Analyzer IIx 2016-10-26T17:43:19.140113+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820Vj036923z1QYVBPkq1x ENCSR000BLC https://www.encodeproject.org/experiments/ENCSR000BLC control Control-human GM12891 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF562XPJ https://www.encodeproject.org/files/ENCFF562XPJ/@@download/ENCFF562XPJ.bam ENCFF283MYC https://www.encodeproject.org/files/ENCFF283MYC/@@download/ENCFF283MYC.bam 37.9 M 0 35.0 M 0.922 SE 36 36 native 0.0 M 26.3 M 23.0 M 0.605 0.89 0.98 114.17 115 1.02 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/1700e0eb-ee72-4c63-90f9-7657a81db581/@@download/cross_correlation_plot/ENCFF000OJZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMG richard-myers:SL1782 ENCFF000OJZ Illumina Genome Analyzer IIx 2016-10-26T17:37:26.847133+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Yj003698B80B4kPK13B5 ENCSR000BJH https://www.encodeproject.org/experiments/ENCSR000BJH transcription factor PAX5-human GM12891 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF771COC https://www.encodeproject.org/files/ENCFF771COC/@@download/ENCFF771COC.bam ENCFF278ZMY https://www.encodeproject.org/files/ENCFF278ZMY/@@download/ENCFF278ZMY.bam 30.2 M 0 17.2 M 0.569 SE 36 36 native 0.0 M 12.6 M 6.8 M 0.223 0.54 0.54 1.93 120 1.36 4.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/21e15f29-316e-403b-a98e-49a165ba6f08/@@download/cross_correlation_plot/ENCFF000OIJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBK richard-myers:SL1662 ENCFF000OIJ Illumina Genome Analyzer IIx 2016-12-11T00:06:59.999226+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163b2j03697xKX68qyy2kGv ENCSR000BJH https://www.encodeproject.org/experiments/ENCSR000BJH transcription factor PAX5-human GM12891 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF863RJF https://www.encodeproject.org/files/ENCFF863RJF/@@download/ENCFF863RJF.bam ENCFF623NTF https://www.encodeproject.org/files/ENCFF623NTF/@@download/ENCFF623NTF.bam 36.5 M 0 17.1 M 0.467 SE 36 36 native 0.0 M 12.3 M 6.6 M 0.180 0.54 0.49 1.74 125 1.31 3.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2244589-7477-47de-b8bd-992674dc76e2/@@download/cross_correlation_plot/ENCFF000OIM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBL richard-myers:SL2131 ENCFF000OIM Illumina Genome Analyzer IIx 2016-12-11T00:24:12.935287+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163b7Q03697yz601ypVJ39J ENCSR000BIK https://www.encodeproject.org/experiments/ENCSR000BIK transcription factor POLR2A-human GM12891 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF653FWT https://www.encodeproject.org/files/ENCFF653FWT/@@download/ENCFF653FWT.bam ENCFF052MCH https://www.encodeproject.org/files/ENCFF052MCH/@@download/ENCFF052MCH.bam 28.7 M 0 22.3 M 0.776 SE 36 36 native 0.0 M 16.1 M 15.2 M 0.530 0.95 0.96 34.58 110 1.36 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca57d86c-7010-4fd0-a218-3b0fa255faf8/@@download/cross_correlation_plot/ENCFF000OIZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBW richard-myers:SL908 ENCFF000OIZ Illumina Genome Analyzer IIx 2016-12-11T01:31:09.192441+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163f2Q03695F8Bk64ff072Q ENCSR000BIK https://www.encodeproject.org/experiments/ENCSR000BIK transcription factor POLR2A-human GM12891 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF453WOE https://www.encodeproject.org/files/ENCFF453WOE/@@download/ENCFF453WOE.bam ENCFF604QBL https://www.encodeproject.org/files/ENCFF604QBL/@@download/ENCFF604QBL.bam 23.8 M 0 20.1 M 0.843 SE 36 36 native 0.0 M 14.9 M 14.2 M 0.598 0.96 0.97 39.66 140 1.37 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6506226-f475-4477-ac8d-5f10d23495a5/@@download/cross_correlation_plot/ENCFF000OIW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBX richard-myers:SL921 ENCFF000OIW Illumina Genome Analyzer IIx 2016-12-11T01:18:38.169140+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163f7003695yqvv8q311QJ4 ENCSR000BIL https://www.encodeproject.org/experiments/ENCSR000BIL "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human GM12891 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF102LCM https://www.encodeproject.org/files/ENCFF102LCM/@@download/ENCFF102LCM.bam ENCFF967NMW https://www.encodeproject.org/files/ENCFF967NMW/@@download/ENCFF967NMW.bam 25.7 M 0 17.2 M 0.671 SE 36 36 native 0.0 M 12.2 M 11.6 M 0.450 0.95 0.96 32.92 120 1.43 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/61bdbba8-d633-4f63-8bcf-b6544468a9a4/@@download/cross_correlation_plot/ENCFF000OIR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLS richard-myers:SL910 ENCFF000OIR Illumina Genome Analyzer IIx 2016-12-11T04:25:40.941278+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Zj00369F4yf5544b19Kq ENCSR000BIL https://www.encodeproject.org/experiments/ENCSR000BIL "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human GM12891 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF810NAZ https://www.encodeproject.org/files/ENCFF810NAZ/@@download/ENCFF810NAZ.bam ENCFF253DGW https://www.encodeproject.org/files/ENCFF253DGW/@@download/ENCFF253DGW.bam 23.9 M 0 20.5 M 0.856 SE 36 36 native 0.0 M 15.2 M 14.7 M 0.613 0.97 0.97 40.62 135 1.32 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/9efaad5a-34e2-4a5a-a836-88a0eed49f2e/@@download/cross_correlation_plot/ENCFF000OIT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDG richard-myers:SL922 ENCFF000OIT Illumina Genome Analyzer IIx 2016-12-11T04:27:52.719901+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Zx00369BJyPz9fb9qYGQ ENCSR000BII https://www.encodeproject.org/experiments/ENCSR000BII transcription factor POU2F2-human GM12891 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF843RIG https://www.encodeproject.org/files/ENCFF843RIG/@@download/ENCFF843RIG.bam ENCFF074EVM https://www.encodeproject.org/files/ENCFF074EVM/@@download/ENCFF074EVM.bam 87.8 M 0 70.2 M 0.800 SE 36 36 native 0.0 M 46.9 M 31.8 M 0.363 0.68 0.65 2.18 120 1.14 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/b99119d2-b68c-42ef-8fd6-f3f489da59c1/@@download/cross_correlation_plot/ENCFF000OJO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCX richard-myers:SL802 ENCFF000OJO Illumina Genome Analyzer IIx 2016-12-10T22:56:56.077052+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162k38036969X0jJ6p3ffV1 ENCSR000BII https://www.encodeproject.org/experiments/ENCSR000BII transcription factor POU2F2-human GM12891 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF809CJJ https://www.encodeproject.org/files/ENCFF809CJJ/@@download/ENCFF809CJJ.bam ENCFF637LDY https://www.encodeproject.org/files/ENCFF637LDY/@@download/ENCFF637LDY.bam 20.9 M 0 18.2 M 0.872 SE 36 36 native 0.0 M 13.0 M 12.8 M 0.613 0.98 0.99 81.13 140 1.15 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/2994ff27-874a-4ef2-8d74-b8106e56d14c/@@download/cross_correlation_plot/ENCFF000OJH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKR richard-myers:SL918 ENCFF000OJH Illumina Genome Analyzer IIx 2016-12-10T20:35:10.679438+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162k8j03697vfpg2qKbyZ7g ENCSR000BIJ https://www.encodeproject.org/experiments/ENCSR000BIJ transcription factor SPI1-human GM12891 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF724WMD https://www.encodeproject.org/files/ENCFF724WMD/@@download/ENCFF724WMD.bam ENCFF688SGS https://www.encodeproject.org/files/ENCFF688SGS/@@download/ENCFF688SGS.bam 41.0 M 0 27.0 M 0.658 SE 36 36 native 0.0 M 19.5 M 16.5 M 0.402 0.85 0.90 13.60 120 2.52 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/bedbb05e-a639-47d7-b71c-371a705542e4/@@download/cross_correlation_plot/ENCFF000OJM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSZ richard-myers:SL977 ENCFF000OJM Illumina Genome Analyzer IIx 2016-12-11T00:26:31.567591+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163VQ00369Bxb30J6x5bZ7b ENCSR000BIJ https://www.encodeproject.org/experiments/ENCSR000BIJ transcription factor SPI1-human GM12891 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF482TVZ https://www.encodeproject.org/files/ENCFF482TVZ/@@download/ENCFF482TVZ.bam ENCFF300OET https://www.encodeproject.org/files/ENCFF300OET/@@download/ENCFF300OET.bam 24.4 M 0 20.0 M 0.820 SE 36 36 native 0.0 M 15.0 M 13.4 M 0.550 0.90 0.94 21.96 135 2.57 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/ded2dca3-ea61-47ff-bdee-babb407053c4/@@download/cross_correlation_plot/ENCFF000OJL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTA richard-myers:SL948 ENCFF000OJL Illumina Genome Analyzer IIx 2016-12-10T22:54:11.325488+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163VZQ03697k5jKB6pJ7qp0 ENCSR000BIM https://www.encodeproject.org/experiments/ENCSR000BIM transcription factor TAF1-human GM12891 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF415TYP https://www.encodeproject.org/files/ENCFF415TYP/@@download/ENCFF415TYP.bam ENCFF837KRT https://www.encodeproject.org/files/ENCFF837KRT/@@download/ENCFF837KRT.bam 44.6 M 0 27.5 M 0.617 SE 36 36 native 0.0 M 18.7 M 17.5 M 0.392 0.94 0.94 15.89 100 1.15 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/b93efa2e-5377-4fdf-b53c-cb4c1d837493/@@download/cross_correlation_plot/ENCFF000OKG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDV richard-myers:SL749 ENCFF000OKG Illumina Genome Analyzer IIx 2016-12-11T02:53:04.059288+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163zP003697K4B1J71pxzxQ ENCSR000BIM https://www.encodeproject.org/experiments/ENCSR000BIM transcription factor TAF1-human GM12891 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF600IBV https://www.encodeproject.org/files/ENCFF600IBV/@@download/ENCFF600IBV.bam ENCFF347EJS https://www.encodeproject.org/files/ENCFF347EJS/@@download/ENCFF347EJS.bam 22.3 M 0 18.9 M 0.847 SE 36 36 native 0.0 M 13.4 M 13.1 M 0.589 0.98 0.98 56.44 110 1.12 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/aacf153a-82bf-4bf1-a7c8-aef3b35d4764/@@download/cross_correlation_plot/ENCFF000OKD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDY richard-myers:SL920 ENCFF000OKD Illumina Genome Analyzer IIx 2016-12-11T02:34:04.352217+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163zZ00369KQ3Yk1yz1kffK ENCSR000BKJ https://www.encodeproject.org/experiments/ENCSR000BKJ transcription factor YY1-human GM12891 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF165NIG https://www.encodeproject.org/files/ENCFF165NIG/@@download/ENCFF165NIG.bam ENCFF653KPG https://www.encodeproject.org/files/ENCFF653KPG/@@download/ENCFF653KPG.bam 27.7 M 0 24.5 M 0.886 SE 36 36 native 0.0 M 17.5 M 13.3 M 0.482 0.77 0.83 6.18 120 1.19 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d151fb9-02a7-47bd-93f5-4c3a1970b78d/@@download/cross_correlation_plot/ENCFF000OKL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIF richard-myers:SL2388 ENCFF000OKL Illumina Genome Analyzer IIx 2016-12-11T04:21:09.699612+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Q5j03690xXYVJ7Fj2f7G ENCSR000BKJ https://www.encodeproject.org/experiments/ENCSR000BKJ transcription factor YY1-human GM12891 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF403JXW https://www.encodeproject.org/files/ENCFF403JXW/@@download/ENCFF403JXW.bam ENCFF563LDE https://www.encodeproject.org/files/ENCFF563LDE/@@download/ENCFF563LDE.bam 26.1 M 0 19.6 M 0.751 SE 36 36 native 0.0 M 14.8 M 11.7 M 0.450 0.80 0.81 5.27 115 1.91 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/90132afb-5fed-430a-b281-e593d1beb39a/@@download/cross_correlation_plot/ENCFF000OKM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIG richard-myers:SL2130 ENCFF000OKM Illumina Genome Analyzer IIx 2016-12-11T04:17:19.108537+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165QF003692yykb1zBpz7xj ENCSR000BHY https://www.encodeproject.org/experiments/ENCSR000BHY control Control-human GM12892 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF860NWP https://www.encodeproject.org/files/ENCFF860NWP/@@download/ENCFF860NWP.bam ENCFF414QNF https://www.encodeproject.org/files/ENCFF414QNF/@@download/ENCFF414QNF.bam 31.7 M 0 19.7 M 0.621 SE 36 36 native 0.0 M 13.0 M 12.9 M 0.405 0.99 0.99 209.68 135 1.03 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/178ba66b-be5b-4d7f-b351-8f2a01de2c89/@@download/cross_correlation_plot/ENCFF000OLW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLP richard-myers:SL818 ENCFF000OLW Illumina Genome Analyzer IIx 2016-10-26T17:38:09.851060+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0821bQ03695140QP5B2vfXV ENCSR000BIG https://www.encodeproject.org/experiments/ENCSR000BIG control Control-human GM12892 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF827ILE https://www.encodeproject.org/files/ENCFF827ILE/@@download/ENCFF827ILE.bam ENCFF622WYL https://www.encodeproject.org/files/ENCFF622WYL/@@download/ENCFF622WYL.bam 62.0 M 0 55.2 M 0.891 SE 36 36 native 0.0 M 41.2 M 33.3 M 0.537 0.85 0.87 7.75 110 1.03 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a67dc15-0a58-442c-b2e6-f6b7362c639c/@@download/cross_correlation_plot/ENCFF000OLS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDL richard-myers:SL1783 ENCFF000OLS Illumina Genome Analyzer IIx 2016-10-26T17:44:13.644635+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08261j0369KxbFbzV9pvvZj ENCSR000BJI https://www.encodeproject.org/experiments/ENCSR000BJI transcription factor PAX5-human GM12892 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF853EOZ https://www.encodeproject.org/files/ENCFF853EOZ/@@download/ENCFF853EOZ.bam ENCFF508IXY https://www.encodeproject.org/files/ENCFF508IXY/@@download/ENCFF508IXY.bam 39.8 M 0 19.1 M 0.481 SE 36 36 native 0.0 M 14.4 M 5.0 M 0.126 0.35 0.25 0.96 115 1.43 6.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/f96da303-6ccf-43c7-8784-94ea9fb09972/@@download/cross_correlation_plot/ENCFF000OKU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLE richard-myers:SL1664 ENCFF000OKU Illumina Genome Analyzer IIx 2016-12-11T03:34:45.909279+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164gP80369PvYp91zK1PxFx ENCSR000BJI https://www.encodeproject.org/experiments/ENCSR000BJI transcription factor PAX5-human GM12892 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF968WVT https://www.encodeproject.org/files/ENCFF968WVT/@@download/ENCFF968WVT.bam ENCFF945KFJ https://www.encodeproject.org/files/ENCFF945KFJ/@@download/ENCFF945KFJ.bam 23.1 M 0 13.6 M 0.589 SE 36 36 native 0.0 M 10.3 M 8.2 M 0.354 0.80 0.80 4.91 120 1.46 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/876885f9-e812-4c62-b8ed-089b867440f6/@@download/cross_correlation_plot/ENCFF000OKT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLD richard-myers:SL2133 ENCFF000OKT Illumina Genome Analyzer IIx 2016-12-11T03:28:59.027570+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164gYj0369KQ3Yk1yz1kgXQ ENCSR000BHZ https://www.encodeproject.org/experiments/ENCSR000BHZ transcription factor POLR2A-human GM12892 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF503BXT https://www.encodeproject.org/files/ENCFF503BXT/@@download/ENCFF503BXT.bam ENCFF932ZNE https://www.encodeproject.org/files/ENCFF932ZNE/@@download/ENCFF932ZNE.bam 38.8 M 0 33.9 M 0.872 SE 36 36 native 0.0 M 25.5 M 23.4 M 0.603 0.92 0.94 21.64 145 1.58 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/42533d17-5597-490e-8221-e7ef03be273f/@@download/cross_correlation_plot/ENCFF000OLJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDM richard-myers:SL909 ENCFF000OLJ Illumina Genome Analyzer IIx 2016-12-11T03:18:10.549422+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16496803693J2XX63yZ7Bzq ENCSR000BHZ https://www.encodeproject.org/experiments/ENCSR000BHZ transcription factor POLR2A-human GM12892 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF853DFV https://www.encodeproject.org/files/ENCFF853DFV/@@download/ENCFF853DFV.bam ENCFF576UCN https://www.encodeproject.org/files/ENCFF576UCN/@@download/ENCFF576UCN.bam 26.2 M 0 21.7 M 0.830 SE 36 36 native 0.0 M 15.8 M 15.3 M 0.583 0.97 0.98 50.97 120 1.28 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/751e4266-c1bf-4245-944f-c653ae495508/@@download/cross_correlation_plot/ENCFF000OLH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYL richard-myers:SL944 ENCFF000OLH Illumina Genome Analyzer IIx 2016-12-11T03:05:10.157946+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1649F003697K4B1J71py00k ENCSR000BIA https://www.encodeproject.org/experiments/ENCSR000BIA "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human GM12892 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF449ZGE https://www.encodeproject.org/files/ENCFF449ZGE/@@download/ENCFF449ZGE.bam ENCFF275YFP https://www.encodeproject.org/files/ENCFF275YFP/@@download/ENCFF275YFP.bam 27.6 M 0 16.8 M 0.608 SE 36 36 native 0.0 M 11.2 M 10.7 M 0.387 0.96 0.97 37.33 125 1.48 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/2bcf40e0-f7ea-4a3e-9532-b0d7473a73f8/@@download/cross_correlation_plot/ENCFF000OLB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JON richard-myers:SL911 ENCFF000OLB Illumina Genome Analyzer IIx 2016-12-10T17:54:07.313956+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162K380369B6ZyvJ8yKQX7x ENCSR000BIA https://www.encodeproject.org/experiments/ENCSR000BIA "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human GM12892 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF392PMX https://www.encodeproject.org/files/ENCFF392PMX/@@download/ENCFF392PMX.bam ENCFF060BGI https://www.encodeproject.org/files/ENCFF060BGI/@@download/ENCFF060BGI.bam 25.1 M 0 21.8 M 0.867 SE 36 36 native 0.0 M 16.1 M 15.3 M 0.609 0.95 0.97 39.53 145 1.32 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7f76a9e-da03-4e96-9200-0584bab4d032/@@download/cross_correlation_plot/ENCFF000OLD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOO richard-myers:SL946 ENCFF000OLD Illumina Genome Analyzer IIx 2016-12-10T19:29:39.642693+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162K7Q0369Bxb30J6x5bYzx ENCSR000BIB https://www.encodeproject.org/experiments/ENCSR000BIB transcription factor TAF1-human GM12892 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF863AIR https://www.encodeproject.org/files/ENCFF863AIR/@@download/ENCFF863AIR.bam ENCFF583AOA https://www.encodeproject.org/files/ENCFF583AOA/@@download/ENCFF583AOA.bam 39.1 M 0 22.6 M 0.578 SE 36 36 native 0.0 M 14.9 M 13.3 M 0.339 0.89 0.89 9.06 100 1.22 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/630e3610-b68d-48e7-8da2-9df586af8d17/@@download/cross_correlation_plot/ENCFF000OMD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOQ richard-myers:SL736 ENCFF000OMD Illumina Genome Analyzer IIx 2016-12-11T04:10:12.229269+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16594j0369PvYp91zK1PxQp ENCSR000BIB https://www.encodeproject.org/experiments/ENCSR000BIB transcription factor TAF1-human GM12892 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF114FFY https://www.encodeproject.org/files/ENCFF114FFY/@@download/ENCFF114FFY.bam ENCFF083XSA https://www.encodeproject.org/files/ENCFF083XSA/@@download/ENCFF083XSA.bam 22.2 M 0 18.5 M 0.835 SE 36 36 native 0.0 M 13.1 M 12.8 M 0.579 0.98 0.98 62.38 120 1.06 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/872fd5ba-4b7f-4ae5-ad91-24d0e32065f6/@@download/cross_correlation_plot/ENCFF000OLZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOP richard-myers:SL945 ENCFF000OLZ Illumina Genome Analyzer IIx 2016-12-11T04:07:32.370886+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1659B00369KbxV61z4GFvZ4 ENCSR000BLT https://www.encodeproject.org/experiments/ENCSR000BLT transcription factor YY1-human GM12892 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF981GSU https://www.encodeproject.org/files/ENCFF981GSU/@@download/ENCFF981GSU.bam ENCFF782ISX https://www.encodeproject.org/files/ENCFF782ISX/@@download/ENCFF782ISX.bam 22.7 M 0 19.0 M 0.836 SE 36 36 native 0.0 M 14.2 M 11.9 M 0.525 0.84 0.88 9.75 115 2.17 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc4d39d8-4318-4ad5-acb0-4f62536c6c12/@@download/cross_correlation_plot/ENCFF000OMI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRU richard-myers:SL2132 ENCFF000OMI Illumina Genome Analyzer IIx 2016-12-10T20:38:50.954845+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162pQj036933PVVJ7Qq017p ENCSR000BLT https://www.encodeproject.org/experiments/ENCSR000BLT transcription factor YY1-human GM12892 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF627UME https://www.encodeproject.org/files/ENCFF627UME/@@download/ENCFF627UME.bam ENCFF297QAP https://www.encodeproject.org/files/ENCFF297QAP/@@download/ENCFF297QAP.bam 32.4 M 0 30.4 M 0.938 SE 36 36 native 0.0 M 23.5 M 19.9 M 0.612 0.85 0.85 6.47 110 1.21 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/1227a4aa-850e-4738-a972-92fa8cb51e8a/@@download/cross_correlation_plot/ENCFF000OML.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZI richard-myers:SL3584 ENCFF000OML Illumina Genome Analyzer IIx 2016-12-10T21:01:32.582763+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162pbj03697vfpg2qKbyZ83 ENCSR000BQU https://www.encodeproject.org/experiments/ENCSR000BQU transcription factor ATF2-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF691OFH https://www.encodeproject.org/files/ENCFF691OFH/@@download/ENCFF691OFH.bam ENCFF342OKF https://www.encodeproject.org/files/ENCFF342OKF/@@download/ENCFF342OKF.bam 38.5 M 0 33.4 M 0.869 SE 36 36 native 0.0 M 25.5 M 23.3 M 0.606 0.93 0.93 14.78 135 1.05 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7b640d9-03b6-4520-acdb-6676801c3fd7/@@download/cross_correlation_plot/ENCFF000OMR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGM richard-myers:SL7904 ENCFF000OMR Illumina Genome Analyzer IIx 2016-12-11T00:08:28.483711+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163J500369PJ8BP63qf1FZz ENCSR000BQU https://www.encodeproject.org/experiments/ENCSR000BQU transcription factor ATF2-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF200GEK https://www.encodeproject.org/files/ENCFF200GEK/@@download/ENCFF200GEK.bam ENCFF497ZKE https://www.encodeproject.org/files/ENCFF497ZKE/@@download/ENCFF497ZKE.bam 42.6 M 0 36.7 M 0.863 SE 36 36 native 0.0 M 28.5 M 26.7 M 0.628 0.95 0.95 20.50 110 1.05 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/3db7a12c-7ba9-4947-98d0-2b8a34d518a5/@@download/cross_correlation_plot/ENCFF000OMY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGN richard-myers:SL8136 ENCFF000OMY Illumina Genome Analyzer IIx 2016-12-11T00:29:20.115016+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163J9j03693JQ1ZJ95zxGk5 ENCSR000BKC https://www.encodeproject.org/experiments/ENCSR000BKC transcription factor ATF3-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF641XBG https://www.encodeproject.org/files/ENCFF641XBG/@@download/ENCFF641XBG.bam ENCFF122CVO https://www.encodeproject.org/files/ENCFF122CVO/@@download/ENCFF122CVO.bam 22.5 M 0 17.2 M 0.767 SE 36 36 native 0.0 M 13.0 M 11.5 M 0.514 0.89 0.89 8.55 120 1.11 2.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/8979746f-08f6-42e7-b4b0-940bead8592b/@@download/cross_correlation_plot/ENCFF000OMW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTU richard-myers:SL1519 ENCFF000OMW Illumina Genome Analyzer IIx 2016-12-10T20:19:48.754798+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162ZK803696Kk1YFv8qy51z ENCSR000BKC https://www.encodeproject.org/experiments/ENCSR000BKC transcription factor ATF3-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF712JVJ https://www.encodeproject.org/files/ENCFF712JVJ/@@download/ENCFF712JVJ.bam ENCFF108CBZ https://www.encodeproject.org/files/ENCFF108CBZ/@@download/ENCFF108CBZ.bam 14.4 M 0 13.2 M 0.915 SE 36 36 native 0.0 M 9.3 M 8.6 M 0.602 0.93 0.93 13.47 145 1.16 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/07875be2-0d71-42b0-b5b3-d431b77b1ed3/@@download/cross_correlation_plot/ENCFF000OMV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBH richard-myers:SL1968 ENCFF000OMV Illumina Genome Analyzer IIx 2016-12-10T20:12:53.788065+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162ZYj036969X0jJ6p3ffPp ENCSR000BIP https://www.encodeproject.org/experiments/ENCSR000BIP transcription factor BCL11A-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF916PMP https://www.encodeproject.org/files/ENCFF916PMP/@@download/ENCFF916PMP.bam ENCFF854FYP https://www.encodeproject.org/files/ENCFF854FYP/@@download/ENCFF854FYP.bam 29.6 M 0 21.3 M 0.720 SE 36 36 native 0.0 M 15.4 M 12.4 M 0.421 0.81 0.81 5.10 105 1.13 3.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/be6d58a4-a53f-414f-a8dc-fae255cc82c7/@@download/cross_correlation_plot/ENCFF000ONI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGH richard-myers:SL1314 ENCFF000ONI Illumina Genome Analyzer IIx 2017-04-21T05:40:07.787473+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3vj80Q03690qb190pgj7p8Z ENCSR000BMJ https://www.encodeproject.org/experiments/ENCSR000BMJ transcription factor BCL11A-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF974QRX https://www.encodeproject.org/files/ENCFF974QRX/@@download/ENCFF974QRX.bam ENCFF534OAL https://www.encodeproject.org/files/ENCFF534OAL/@@download/ENCFF534OAL.bam 19.6 M 0 17.5 M 0.896 SE 36 36 native 0.0 M 13.0 M 11.4 M 0.585 0.88 0.88 8.27 100 1.08 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa11c660-4b68-4620-a98e-f5d8ac18b481/@@download/cross_correlation_plot/ENCFF000ONH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCQ richard-myers:SL3989 ENCFF000ONH Illumina Genome Analyzer IIx 2017-04-21T05:12:22.734009+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3vj94j03690qb190pgj7p9Y ENCSR000BHL https://www.encodeproject.org/experiments/ENCSR000BHL control Control-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF948LKH https://www.encodeproject.org/files/ENCFF948LKH/@@download/ENCFF948LKH.bam ENCFF667QDX https://www.encodeproject.org/files/ENCFF667QDX/@@download/ENCFF667QDX.bam 57.4 M 0 34.4 M 0.599 SE 36 36 native 0.0 M 22.6 M 22.4 M 0.391 1.00 1.00 207.29 135 1.02 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/df947617-a91b-468a-80aa-96ff8de351e3/@@download/cross_correlation_plot/ENCFF000OSP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMH richard-myers:SL969 ENCFF000OSP Illumina Genome Analyzer IIx 2016-10-26T18:07:08.560388+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0823Qj0369F7fQjy59kFgq0 ENCSR000BPG https://www.encodeproject.org/experiments/ENCSR000BPG control Control-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF691TKO https://www.encodeproject.org/files/ENCFF691TKO/@@download/ENCFF691TKO.bam ENCFF263JCI https://www.encodeproject.org/files/ENCFF263JCI/@@download/ENCFF263JCI.bam 56.0 M 0 48.7 M 0.871 SE 36 36 native 0.0 M 36.2 M 35.3 M 0.631 0.99 0.99 77.19 100 1.01 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/212a58be-46c8-434b-8da8-a2ab074cec11/@@download/cross_correlation_plot/ENCFF000OSS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCE richard-myers:SL6018 ENCFF000OSS Illumina Genome Analyzer IIx 2017-07-08T02:21:51.252074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5Q1J000369GJ1kPG19Vx9b7 ENCSR000BPG https://www.encodeproject.org/experiments/ENCSR000BPG control Control-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF043TVE https://www.encodeproject.org/files/ENCFF043TVE/@@download/ENCFF043TVE.bam ENCFF241IEZ https://www.encodeproject.org/files/ENCFF241IEZ/@@download/ENCFF241IEZ.bam 27.5 M 0 27.1 M 0.984 SE 50 36 36 0.0 M 20.6 M 20.3 M 0.739 0.99 0.99 176.01 90 1.03 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/3138d741-e63d-4795-8dcf-6385a0c84fe7/@@download/cross_correlation_plot/ENCFF000OST-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYX richard-myers:SL12796 ENCFF000OST HiSeq 2000 2017-07-10T16:56:10.603323+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5Vkb90036900j9y0pbqByPK ENCSR000BSN https://www.encodeproject.org/experiments/ENCSR000BSN transcription factor CREB1-human H1-hESC stem cell richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BNH https://www.encodeproject.org/experiments/ENCSR000BNH "transcription factor,RNA binding protein" CTCF-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF551FQW https://www.encodeproject.org/files/ENCFF551FQW/@@download/ENCFF551FQW.bam ENCFF506MWT https://www.encodeproject.org/files/ENCFF506MWT/@@download/ENCFF506MWT.bam 30.3 M 0 27.7 M 0.915 SE 36 36 native 0.0 M 21.9 M 14.5 M 0.478 0.66 0.67 2.88 110 3.18 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/b54dc856-47f2-48e1-b4b7-5d1c40fa69b9/@@download/cross_correlation_plot/ENCFF000ONR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKV richard-myers:SL2688 ENCFF000ONR Illumina Genome Analyzer IIx 2016-12-11T03:29:14.888120+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164X9Q03692f1gp513PxgKG ENCSR000BNH https://www.encodeproject.org/experiments/ENCSR000BNH "transcription factor,RNA binding protein" CTCF-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF397FGK https://www.encodeproject.org/files/ENCFF397FGK/@@download/ENCFF397FGK.bam ENCFF147FOR https://www.encodeproject.org/files/ENCFF147FOR/@@download/ENCFF147FOR.bam 105.5 M 0 82.6 M 0.783 SE 36 36 native 0.0 M 56.4 M 42.3 M 0.401 0.75 0.75 3.81 120 1.21 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/49f43278-cead-481e-9154-39710056f206/@@download/cross_correlation_plot/ENCFF000OOF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKU richard-myers:SL3067 ENCFF000OOF HiSeq 2000 2016-12-11T04:24:43.972097+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164XK00369BJyPz9fb9qY2V ENCSR000BSI https://www.encodeproject.org/experiments/ENCSR000BSI transcription factor E2F6-human H1-hESC stem cell richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BJA https://www.encodeproject.org/experiments/ENCSR000BJA transcription factor EGR1-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF054DVF https://www.encodeproject.org/files/ENCFF054DVF/@@download/ENCFF054DVF.bam ENCFF326PXU https://www.encodeproject.org/files/ENCFF326PXU/@@download/ENCFF326PXU.bam 30.0 M 0 27.0 M 0.900 SE 36 36 native 0.0 M 20.7 M 19.0 M 0.636 0.92 0.92 12.42 110 1.06 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/69f74161-59d8-4c12-aa03-9c0fcd2cfbdc/@@download/cross_correlation_plot/ENCFF000OOH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRS richard-myers:SL1482 ENCFF000OOH Illumina Genome Analyzer IIx 2016-12-11T03:46:52.589561+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164jJj03697k5jKB6pJ7qvV ENCSR000BJA https://www.encodeproject.org/experiments/ENCSR000BJA transcription factor EGR1-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF777MZR https://www.encodeproject.org/files/ENCFF777MZR/@@download/ENCFF777MZR.bam ENCFF387QYI https://www.encodeproject.org/files/ENCFF387QYI/@@download/ENCFF387QYI.bam 28.1 M 0 25.2 M 0.895 SE 36 36 native 0.0 M 19.0 M 17.9 M 0.636 0.95 0.95 18.33 125 1.09 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/841c2aff-3c94-4f45-b70d-5df9d5a31232/@@download/cross_correlation_plot/ENCFF000OOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRT richard-myers:SL1885 ENCFF000OOO Illumina Genome Analyzer IIx 2016-12-11T03:42:15.592469+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164jX80369KbxV61z4GFvJ6 ENCSR000BKK https://www.encodeproject.org/experiments/ENCSR000BKK transcription factor EP300-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF998ZIK https://www.encodeproject.org/files/ENCFF998ZIK/@@download/ENCFF998ZIK.bam ENCFF796GKK https://www.encodeproject.org/files/ENCFF796GKK/@@download/ENCFF796GKK.bam 17.8 M 0 15.8 M 0.889 SE 36 36 native 0.0 M 12.0 M 10.3 M 0.580 0.86 0.86 6.91 115 1.11 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/188bad86-0bbd-433c-abb1-6fc6431f17a3/@@download/cross_correlation_plot/ENCFF000OQU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMC richard-myers:SL2250 ENCFF000OQU Illumina Genome Analyzer IIx 2016-12-11T04:05:59.040116+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16584Q0369BgG8x1ygv1XFx ENCSR000BKK https://www.encodeproject.org/experiments/ENCSR000BKK transcription factor EP300-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF299IMS https://www.encodeproject.org/files/ENCFF299IMS/@@download/ENCFF299IMS.bam ENCFF887YAK https://www.encodeproject.org/files/ENCFF887YAK/@@download/ENCFF887YAK.bam 28.6 M 0 24.9 M 0.871 SE 36 36 native 0.0 M 18.8 M 17.9 M 0.624 0.95 0.95 19.48 120 1.10 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/41e2b2bc-6842-4fcd-8656-eeeb8dcddad6/@@download/cross_correlation_plot/ENCFF000ORA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMD richard-myers:SL1883 ENCFF000ORA Illumina Genome Analyzer IIx 2016-12-11T04:08:22.220008+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1658980369B6ZyvJ8yKQXJJ ENCSR000BNS https://www.encodeproject.org/experiments/ENCSR000BNS transcription factor FOSL1-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF953PTA https://www.encodeproject.org/files/ENCFF953PTA/@@download/ENCFF953PTA.bam ENCFF983LHJ https://www.encodeproject.org/files/ENCFF983LHJ/@@download/ENCFF983LHJ.bam 16.8 M 0 15.8 M 0.940 SE 36 36 native 0.0 M 11.3 M 8.2 M 0.487 0.73 0.71 3.13 115 1.10 2.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/8016630b-727b-4cb5-815a-d90ad03f711c/@@download/cross_correlation_plot/ENCFF000OOU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMX richard-myers:SL2692 ENCFF000OOU Illumina Genome Analyzer IIx 2016-12-10T20:34:08.087305+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162v3003695Kj1j8qPQgkK1 ENCSR000BNS https://www.encodeproject.org/experiments/ENCSR000BNS transcription factor FOSL1-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF113JVG https://www.encodeproject.org/files/ENCFF113JVG/@@download/ENCFF113JVG.bam ENCFF608UEO https://www.encodeproject.org/files/ENCFF608UEO/@@download/ENCFF608UEO.bam 21.8 M 0 20.2 M 0.927 SE 36 36 native 0.0 M 14.7 M 11.5 M 0.526 0.78 0.77 4.03 145 1.05 3.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/2b29c1bd-ca5c-4b24-bb2a-d1250ec6685d/@@download/cross_correlation_plot/ENCFF000OOX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMW richard-myers:SL4211 ENCFF000OOX Illumina Genome Analyzer IIx 2016-12-10T20:38:57.302313+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162v8803697K4B1J71pxzZq ENCSR000BIW https://www.encodeproject.org/experiments/ENCSR000BIW transcription factor GABPA-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF932SAB https://www.encodeproject.org/files/ENCFF932SAB/@@download/ENCFF932SAB.bam ENCFF517RFE https://www.encodeproject.org/files/ENCFF517RFE/@@download/ENCFF517RFE.bam 34.1 M 0 31.0 M 0.909 SE 36 36 native 0.0 M 23.4 M 22.9 M 0.671 0.98 0.98 45.64 120 1.12 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/17b2955a-18d0-4285-9985-3958a154d83c/@@download/cross_correlation_plot/ENCFF000OPC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRK richard-myers:SL1518 ENCFF000OPC Illumina Genome Analyzer IIx 2016-12-11T02:56:15.173193+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1640jj0369F4yf5544b19Gp ENCSR000BIW https://www.encodeproject.org/experiments/ENCSR000BIW transcription factor GABPA-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF325UFA https://www.encodeproject.org/files/ENCFF325UFA/@@download/ENCFF325UFA.bam ENCFF676XEO https://www.encodeproject.org/files/ENCFF676XEO/@@download/ENCFF676XEO.bam 25.6 M 0 15.3 M 0.595 SE 36 36 native 0.0 M 11.9 M 9.2 M 0.360 0.78 0.77 4.17 150 1.10 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec4f6343-b04d-4d3e-8d48-6cd8cbc35272/@@download/cross_correlation_plot/ENCFF000OPF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRL richard-myers:SL1660 ENCFF000OPF Illumina Genome Analyzer IIx 2016-12-11T02:30:52.072898+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1640xQ03692pJ09J76g5g3v ENCSR000BNR https://www.encodeproject.org/experiments/ENCSR000BNR "transcription factor,chromatin remodeller" HDAC2-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF397UQW https://www.encodeproject.org/files/ENCFF397UQW/@@download/ENCFF397UQW.bam ENCFF716SQR https://www.encodeproject.org/files/ENCFF716SQR/@@download/ENCFF716SQR.bam 31.2 M 0 27.6 M 0.885 SE 36 36 native 0.0 M 20.5 M 17.1 M 0.550 0.84 0.83 5.72 110 1.09 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/059b1812-aaeb-4e28-8065-edba38ba8c43/@@download/cross_correlation_plot/ENCFF000OPK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDD richard-myers:SL3935 ENCFF000OPK Illumina Genome Analyzer IIx 2016-12-11T04:03:28.811890+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1652G80369KQ3Yk1yz1kgbP ENCSR000BNR https://www.encodeproject.org/experiments/ENCSR000BNR "transcription factor,chromatin remodeller" HDAC2-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF218SMD https://www.encodeproject.org/files/ENCFF218SMD/@@download/ENCFF218SMD.bam ENCFF146IPZ https://www.encodeproject.org/files/ENCFF146IPZ/@@download/ENCFF146IPZ.bam 35.8 M 0 31.1 M 0.868 SE 36 36 native 0.0 M 23.1 M 17.5 M 0.490 0.76 0.75 3.71 120 1.13 2.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8667890-7b57-49fd-8c67-2c3c30437b1b/@@download/cross_correlation_plot/ENCFF000OPL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNF richard-myers:SL3454 ENCFF000OPL Illumina Genome Analyzer IIx 2016-12-11T04:06:48.769200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1652V00369GF0YB1zjPf6pB ENCSR000BKP https://www.encodeproject.org/experiments/ENCSR000BKP transcription factor JUND-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF015LMA https://www.encodeproject.org/files/ENCFF015LMA/@@download/ENCFF015LMA.bam ENCFF719SSA https://www.encodeproject.org/files/ENCFF719SSA/@@download/ENCFF719SSA.bam 27.2 M 0 25.4 M 0.936 SE 36 36 native 0.0 M 19.0 M 16.4 M 0.605 0.86 0.86 6.92 120 1.08 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf47a5c0-0128-47f8-925b-590ae655aebe/@@download/cross_correlation_plot/ENCFF000OPS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZX richard-myers:SL2690 ENCFF000OPS Illumina Genome Analyzer IIx 2016-12-11T04:09:35.828269+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1658P00369BgG8x1ygv1XG8 ENCSR000BKP https://www.encodeproject.org/experiments/ENCSR000BKP transcription factor JUND-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF889YQP https://www.encodeproject.org/files/ENCFF889YQP/@@download/ENCFF889YQP.bam ENCFF253UUS https://www.encodeproject.org/files/ENCFF253UUS/@@download/ENCFF253UUS.bam 84.3 M 0 55.9 M 0.664 SE 36 36 native 0.0 M 38.3 M 15.9 M 0.188 0.42 0.36 1.36 90 1.31 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f7eba1d-34e6-4166-a56c-9af6a0cc8747/@@download/cross_correlation_plot/ENCFF000OPZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZW richard-myers:SL3065 ENCFF000OPZ HiSeq 2000 2016-12-11T04:40:27.067463+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1658Z80369BJyPz9fb9qY90 ENCSR000BSJ https://www.encodeproject.org/experiments/ENCSR000BSJ transcription factor MAX-human H1-hESC stem cell richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BMT https://www.encodeproject.org/experiments/ENCSR000BMT transcription factor NANOG-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF805SCJ https://www.encodeproject.org/files/ENCFF805SCJ/@@download/ENCFF805SCJ.bam ENCFF691GHU https://www.encodeproject.org/files/ENCFF691GHU/@@download/ENCFF691GHU.bam 15.3 M 0 14.3 M 0.936 SE 36 36 native 0.0 M 11.0 M 10.2 M 0.664 0.93 0.93 14.19 105 1.13 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/77e4a20d-848d-4c47-b6fd-6f1d56e7a081/@@download/cross_correlation_plot/ENCFF000OQA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZL richard-myers:SL2687 ENCFF000OQA Illumina Genome Analyzer IIx 2016-12-11T02:12:11.214157+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163yK803696z7JqGk4Yzy5y ENCSR000BMT https://www.encodeproject.org/experiments/ENCSR000BMT transcription factor NANOG-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF309DIF https://www.encodeproject.org/files/ENCFF309DIF/@@download/ENCFF309DIF.bam ENCFF915EXK https://www.encodeproject.org/files/ENCFF915EXK/@@download/ENCFF915EXK.bam 63.7 M 0 40.8 M 0.640 SE 36 36 native 0.0 M 27.3 M 7.4 M 0.116 0.27 0.20 1.08 120 1.46 2.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5ca7105-f5e6-4a23-a471-25b5211eca3c/@@download/cross_correlation_plot/ENCFF000OQM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUE richard-myers:SL3068 ENCFF000OQM HiSeq 2000 2016-12-11T02:56:40.237303+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163yY8036969X0jJ6p3ffjq ENCSR000BHN https://www.encodeproject.org/experiments/ENCSR000BHN transcription factor POLR2A-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF574FQP https://www.encodeproject.org/files/ENCFF574FQP/@@download/ENCFF574FQP.bam ENCFF924LLX https://www.encodeproject.org/files/ENCFF924LLX/@@download/ENCFF924LLX.bam 55.8 M 0 33.6 M 0.602 SE 36 36 native 0.0 M 26.6 M 19.8 M 0.355 0.84 0.85 6.82 190 1.39 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/225b3ef3-7f2e-4308-b9a9-e65d6a615304/@@download/cross_correlation_plot/ENCFF000ORP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWN richard-myers:SL980 ENCFF000ORP Illumina Genome Analyzer IIx 2016-12-11T03:06:45.743039+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1643f003697vfpg2qKbyZP2 ENCSR000BHN https://www.encodeproject.org/experiments/ENCSR000BHN transcription factor POLR2A-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF524CBX https://www.encodeproject.org/files/ENCFF524CBX/@@download/ENCFF524CBX.bam ENCFF387HHV https://www.encodeproject.org/files/ENCFF387HHV/@@download/ENCFF387HHV.bam 46.5 M 0 36.5 M 0.784 SE 36 36 native 0.0 M 27.3 M 25.0 M 0.537 0.94 0.95 25.04 110 1.49 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8d6668e-7d42-40d7-afd2-69ecfd31f4c5/@@download/cross_correlation_plot/ENCFF000ORR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWB richard-myers:SL1052 ENCFF000ORR Illumina Genome Analyzer IIx 2016-12-11T03:10:54.224290+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1643q803697vfpg2qKbyZPJ ENCSR000BIC https://www.encodeproject.org/experiments/ENCSR000BIC "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF079DUB https://www.encodeproject.org/files/ENCFF079DUB/@@download/ENCFF079DUB.bam ENCFF255HOK https://www.encodeproject.org/files/ENCFF255HOK/@@download/ENCFF255HOK.bam 28.0 M 0 21.2 M 0.756 SE 36 36 native 0.0 M 14.9 M 14.0 M 0.501 0.94 0.95 20.88 105 1.41 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/54e88f79-a7f9-4860-a823-1fe87ee595b3/@@download/cross_correlation_plot/ENCFF000ORG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCU richard-myers:SL979 ENCFF000ORG Illumina Genome Analyzer IIx 2016-12-10T19:00:51.440262+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162P3Q03693J2XX63yZ7Bp3 ENCSR000BIC https://www.encodeproject.org/experiments/ENCSR000BIC "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF712MPW https://www.encodeproject.org/files/ENCFF712MPW/@@download/ENCFF712MPW.bam ENCFF167SZW https://www.encodeproject.org/files/ENCFF167SZW/@@download/ENCFF167SZW.bam 46.1 M 0 35.6 M 0.773 SE 36 36 native 0.0 M 25.3 M 22.4 M 0.486 0.92 0.93 17.63 80 1.72 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/7555a8f5-8b39-4340-99c6-846acfeb78cb/@@download/cross_correlation_plot/ENCFF000ORK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCT richard-myers:SL1051 ENCFF000ORK Illumina Genome Analyzer IIx 2016-12-10T19:50:40.926187+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162P8803696z7JqGk4YzxvZ ENCSR000BMU https://www.encodeproject.org/experiments/ENCSR000BMU "RNA binding protein,transcription factor" POU5F1-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF488NSO https://www.encodeproject.org/files/ENCFF488NSO/@@download/ENCFF488NSO.bam ENCFF011WLM https://www.encodeproject.org/files/ENCFF011WLM/@@download/ENCFF011WLM.bam 18.2 M 0 16.5 M 0.906 SE 36 36 native 0.0 M 11.9 M 9.3 M 0.514 0.79 0.78 4.25 140 1.16 3.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/3860ef22-d466-48fc-b6fa-5f69cc4ce68d/@@download/cross_correlation_plot/ENCFF000ORV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCA richard-myers:SL2548 ENCFF000ORV Illumina Genome Analyzer IIx 2016-12-11T06:44:07.953463+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166bg00369GF0YB1zjPf79z ENCSR000BMU https://www.encodeproject.org/experiments/ENCSR000BMU "RNA binding protein,transcription factor" POU5F1-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF777DLI https://www.encodeproject.org/files/ENCFF777DLI/@@download/ENCFF777DLI.bam ENCFF006KKG https://www.encodeproject.org/files/ENCFF006KKG/@@download/ENCFF006KKG.bam 35.3 M 0 31.4 M 0.890 SE 36 36 native 0.0 M 23.6 M 15.4 M 0.438 0.66 0.63 2.41 130 1.14 6.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef34fcc7-b692-472e-8305-28aad09a1d19/@@download/cross_correlation_plot/ENCFF000ORW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYE richard-myers:SL3453 ENCFF000ORW Illumina Genome Analyzer IIx 2016-12-11T10:16:23.250370+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166bx00369KbxV61z4GFx29 ENCSR000BLD https://www.encodeproject.org/experiments/ENCSR000BLD transcription factor RAD21-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF987DEN https://www.encodeproject.org/files/ENCFF987DEN/@@download/ENCFF987DEN.bam ENCFF007KVW https://www.encodeproject.org/files/ENCFF007KVW/@@download/ENCFF007KVW.bam 19.3 M 0 18.3 M 0.947 SE 36 36 native 0.0 M 15.1 M 12.9 M 0.667 0.85 0.88 10.61 125 4.38 2.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e6509b1-832b-4a1d-b727-56d9c71a808f/@@download/cross_correlation_plot/ENCFF000OSA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWQ richard-myers:SL2689 ENCFF000OSA Illumina Genome Analyzer IIx 2016-12-10T20:39:49.726896+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162ypj03692BKq0F3V3jFVb ENCSR000BLD https://www.encodeproject.org/experiments/ENCSR000BLD transcription factor RAD21-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF219RFB https://www.encodeproject.org/files/ENCFF219RFB/@@download/ENCFF219RFB.bam ENCFF193ZXJ https://www.encodeproject.org/files/ENCFF193ZXJ/@@download/ENCFF193ZXJ.bam 90.0 M 0 67.3 M 0.747 SE 36 36 native 0.0 M 50.6 M 29.2 M 0.324 0.58 0.61 2.65 130 2.62 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/c58e615d-6e02-4fb6-8c92-03dbf84a9c02/@@download/cross_correlation_plot/ENCFF000OSG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXL richard-myers:SL3066 ENCFF000OSG HiSeq 2000 2016-12-10T22:47:59.544639+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162yzj03695yqvv8q311Q9p ENCSR000BHM https://www.encodeproject.org/experiments/ENCSR000BHM "transcription factor,chromatin remodeller" REST-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF696GNV https://www.encodeproject.org/files/ENCFF696GNV/@@download/ENCFF696GNV.bam ENCFF077GSV https://www.encodeproject.org/files/ENCFF077GSV/@@download/ENCFF077GSV.bam 25.6 M 0 16.6 M 0.647 SE 36 36 native 0.0 M 12.0 M 9.8 M 0.382 0.82 0.92 17.96 110 2.80 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9cda52a-655c-49d9-bbb4-0e8a41789beb/@@download/cross_correlation_plot/ENCFF000OQQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIX richard-myers:SL978 ENCFF000OQQ Illumina Genome Analyzer IIx 2016-12-10T17:51:43.889720+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162JK003692f1gp513Pxg9q ENCSR000BHM https://www.encodeproject.org/experiments/ENCSR000BHM "transcription factor,chromatin remodeller" REST-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF312WAT https://www.encodeproject.org/files/ENCFF312WAT/@@download/ENCFF312WAT.bam ENCFF499LPH https://www.encodeproject.org/files/ENCFF499LPH/@@download/ENCFF499LPH.bam 47.1 M 0 36.0 M 0.765 SE 36 36 native 0.0 M 27.9 M 21.1 M 0.448 0.80 0.91 17.24 115 1.67 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/04efffaf-e606-4ff4-8f10-a33a04038574/@@download/cross_correlation_plot/ENCFF000OQY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBY richard-myers:SL1053 ENCFF000OQY Illumina Genome Analyzer IIx 2016-12-10T19:48:47.651553+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162JY00369KbxV61z4GFv4K ENCSR000BJW https://www.encodeproject.org/experiments/ENCSR000BJW transcription factor RXRA-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF816OHX https://www.encodeproject.org/files/ENCFF816OHX/@@download/ENCFF816OHX.bam ENCFF397JLL https://www.encodeproject.org/files/ENCFF397JLL/@@download/ENCFF397JLL.bam 18.5 M 0 16.6 M 0.895 SE 36 36 native 0.0 M 12.3 M 11.8 M 0.635 0.96 0.96 24.62 125 1.04 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e029c41-83a6-45ab-8669-708e09d6ca39/@@download/cross_correlation_plot/ENCFF000OSU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWS richard-myers:SL1163 ENCFF000OSU Illumina Genome Analyzer IIx 2016-12-10T20:51:20.296582+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162zQ803699Z3Y8493qbp4q ENCSR000BJW https://www.encodeproject.org/experiments/ENCSR000BJW transcription factor RXRA-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF361FRE https://www.encodeproject.org/files/ENCFF361FRE/@@download/ENCFF361FRE.bam ENCFF064LNE https://www.encodeproject.org/files/ENCFF064LNE/@@download/ENCFF064LNE.bam 18.9 M 0 12.8 M 0.676 SE 36 36 native 0.0 M 9.3 M 5.4 M 0.286 0.58 0.56 2.10 130 1.34 5.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/2eeb8e92-7fb0-4e8a-8700-f59071a0ab3b/@@download/cross_correlation_plot/ENCFF000OSX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWR richard-myers:SL2346 ENCFF000OSX Illumina Genome Analyzer IIx 2016-12-10T20:34:58.097097+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162zb803692pJ09J76g5fpB ENCSR000BIS https://www.encodeproject.org/experiments/ENCSR000BIS transcription factor SIN3A-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF789OGM https://www.encodeproject.org/files/ENCFF789OGM/@@download/ENCFF789OGM.bam ENCFF785GXZ https://www.encodeproject.org/files/ENCFF785GXZ/@@download/ENCFF785GXZ.bam 19.6 M 0 16.1 M 0.825 SE 36 36 native 0.0 M 11.8 M 11.1 M 0.565 0.94 0.94 16.23 110 1.19 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/5d35fc57-8918-4a4e-adf8-2e8832c9acc0/@@download/cross_correlation_plot/ENCFF000OTG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJT richard-myers:SL1157 ENCFF000OTG Illumina Genome Analyzer IIx 2016-12-11T04:05:36.082934+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16575803690xXYVJ7Fj2f6k ENCSR000BIS https://www.encodeproject.org/experiments/ENCSR000BIS transcription factor SIN3A-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF256XXT https://www.encodeproject.org/files/ENCFF256XXT/@@download/ENCFF256XXT.bam ENCFF967DJP https://www.encodeproject.org/files/ENCFF967DJP/@@download/ENCFF967DJP.bam 29.0 M 0 21.9 M 0.756 SE 36 36 native 0.0 M 16.0 M 14.0 M 0.484 0.88 0.88 8.12 100 1.13 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/209d1181-615f-4853-8603-12bcdd7e9b4f/@@download/cross_correlation_plot/ENCFF000OTJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJU richard-myers:SL1313 ENCFF000OTJ Illumina Genome Analyzer IIx 2016-12-11T04:08:06.554898+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1657B80369BJyPz9fb9qY86 ENCSR000BIQ https://www.encodeproject.org/experiments/ENCSR000BIQ transcription factor SIX5-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF892YBG https://www.encodeproject.org/files/ENCFF892YBG/@@download/ENCFF892YBG.bam ENCFF105GPY https://www.encodeproject.org/files/ENCFF105GPY/@@download/ENCFF105GPY.bam 18.8 M 0 16.3 M 0.868 SE 36 36 native 0.0 M 12.1 M 11.0 M 0.584 0.90 0.90 10.07 125 1.21 2.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/c278af9f-26b7-4d0b-ae85-c50d27aea08c/@@download/cross_correlation_plot/ENCFF000OTO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTV richard-myers:SL1162 ENCFF000OTO Illumina Genome Analyzer IIx 2016-12-10T21:09:23.912416+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1637Xj03697K4B1J71pxzgG ENCSR000BIQ https://www.encodeproject.org/experiments/ENCSR000BIQ transcription factor SIX5-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF588EKB https://www.encodeproject.org/files/ENCFF588EKB/@@download/ENCFF588EKB.bam ENCFF488UYN https://www.encodeproject.org/files/ENCFF488UYN/@@download/ENCFF488UYN.bam 28.8 M 0 21.6 M 0.752 SE 36 36 native 0.0 M 16.1 M 13.2 M 0.459 0.82 0.81 5.17 135 1.13 3.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/0aaac5ee-167e-4d2e-be10-4f582d773c01/@@download/cross_correlation_plot/ENCFF000OTR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBD richard-myers:SL1317 ENCFF000OTR Illumina Genome Analyzer IIx 2016-12-10T21:26:56.250066+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1637gQ0369BV55708G9qbJk ENCSR000BIR https://www.encodeproject.org/experiments/ENCSR000BIR transcription factor SP1-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF949TUZ https://www.encodeproject.org/files/ENCFF949TUZ/@@download/ENCFF949TUZ.bam ENCFF979RJF https://www.encodeproject.org/files/ENCFF979RJF/@@download/ENCFF979RJF.bam 22.4 M 0 19.1 M 0.853 SE 36 36 native 0.0 M 14.6 M 14.0 M 0.624 0.96 0.96 25.47 140 1.27 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/7b8c6fc6-fd21-4a99-8276-5ca827e035da/@@download/cross_correlation_plot/ENCFF000OTS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBH richard-myers:SL1166 ENCFF000OTS Illumina Genome Analyzer IIx 2016-12-10T20:50:33.949828+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16316Q03692pJ09J76g5fpz ENCSR000BIR https://www.encodeproject.org/experiments/ENCSR000BIR transcription factor SP1-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF346XVM https://www.encodeproject.org/files/ENCFF346XVM/@@download/ENCFF346XVM.bam ENCFF477CHR https://www.encodeproject.org/files/ENCFF477CHR/@@download/ENCFF477CHR.bam 26.0 M 0 20.3 M 0.780 SE 36 36 native 0.0 M 15.1 M 14.1 M 0.541 0.94 0.94 16.69 125 1.24 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed14633d-5593-4c90-923e-081844a9f3e6/@@download/cross_correlation_plot/ENCFF000OTW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBI richard-myers:SL1318 ENCFF000OTW Illumina Genome Analyzer IIx 2016-12-10T20:50:18.311572+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1631Fj03697vfpg2qKbyZ9V ENCSR000BQG https://www.encodeproject.org/experiments/ENCSR000BQG transcription factor SP2-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF581JII https://www.encodeproject.org/files/ENCFF581JII/@@download/ENCFF581JII.bam ENCFF967GJV https://www.encodeproject.org/files/ENCFF967GJV/@@download/ENCFF967GJV.bam 39.9 M 0 33.5 M 0.840 SE 36 36 native 0.0 M 26.1 M 21.9 M 0.550 0.86 0.86 7.26 120 1.07 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/c4dcc071-9b08-4e5a-b7c2-18cc53d0d494/@@download/cross_correlation_plot/ENCFF000OUG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUQ richard-myers:SL5690 ENCFF000OUG Illumina Genome Analyzer IIx 2016-12-11T01:49:11.753186+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Z300369BgG8x1ygv1X26 ENCSR000BQG https://www.encodeproject.org/experiments/ENCSR000BQG transcription factor SP2-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF466ZYL https://www.encodeproject.org/files/ENCFF466ZYL/@@download/ENCFF466ZYL.bam ENCFF570ESC https://www.encodeproject.org/files/ENCFF570ESC/@@download/ENCFF570ESC.bam 43.3 M 0 32.5 M 0.751 SE 36 36 native 0.0 M 23.9 M 21.2 M 0.489 0.91 0.91 11.53 90 1.04 2.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9df052e-d2ca-45ab-8e5a-cbe9209bd8a4/@@download/cross_correlation_plot/ENCFF000OUI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUR richard-myers:SL6005 ENCFF000OUI Illumina Genome Analyzer IIx 2016-12-11T01:51:35.630001+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Z7j03698ZxQY8q63X83F ENCSR000BQV https://www.encodeproject.org/experiments/ENCSR000BQV transcription factor SP4-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF714FXJ https://www.encodeproject.org/files/ENCFF714FXJ/@@download/ENCFF714FXJ.bam ENCFF203AEN https://www.encodeproject.org/files/ENCFF203AEN/@@download/ENCFF203AEN.bam 35.0 M 0 28.8 M 0.825 SE 36 36 native 0.0 M 21.6 M 19.7 M 0.564 0.93 0.93 15.43 120 1.03 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/878f2fe8-6075-491c-83ba-0ce96a8c87e3/@@download/cross_correlation_plot/ENCFF000OUO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDE richard-myers:SL7836 ENCFF000OUO Illumina Genome Analyzer IIx 2016-12-10T21:01:24.545361+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162pv00369K8k6p8qBf9pyX ENCSR000BQV https://www.encodeproject.org/experiments/ENCSR000BQV transcription factor SP4-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF899NMU https://www.encodeproject.org/files/ENCFF899NMU/@@download/ENCFF899NMU.bam ENCFF667MQB https://www.encodeproject.org/files/ENCFF667MQB/@@download/ENCFF667MQB.bam 32.0 M 0 27.3 M 0.852 SE 36 36 native 0.0 M 21.2 M 19.6 M 0.613 0.95 0.95 20.41 120 1.07 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/a20b4dfd-6b99-4ec9-b082-06488c87ccea/@@download/cross_correlation_plot/ENCFF000OUL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDF richard-myers:SL8135 ENCFF000OUL Illumina Genome Analyzer IIx 2016-12-10T20:53:47.261901+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162q1Q0369F4yf5544b18bj ENCSR000BIV https://www.encodeproject.org/experiments/ENCSR000BIV transcription factor SRF-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF575DNN https://www.encodeproject.org/files/ENCFF575DNN/@@download/ENCFF575DNN.bam ENCFF160PEL https://www.encodeproject.org/files/ENCFF160PEL/@@download/ENCFF160PEL.bam 29.6 M 0 26.1 M 0.883 SE 36 36 native 0.0 M 20.2 M 15.9 M 0.538 0.79 0.79 4.41 120 1.17 3.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e402d1e-942c-4aa1-a58d-f864a79b7c63/@@download/cross_correlation_plot/ENCFF000OUU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJE richard-myers:SL1483 ENCFF000OUU Illumina Genome Analyzer IIx 2016-12-11T03:17:26.295208+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164PGQ036933PVVJ7Qq01Z6 ENCSR000BIV https://www.encodeproject.org/experiments/ENCSR000BIV transcription factor SRF-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF890OOH https://www.encodeproject.org/files/ENCFF890OOH/@@download/ENCFF890OOH.bam ENCFF519XKL https://www.encodeproject.org/files/ENCFF519XKL/@@download/ENCFF519XKL.bam 30.0 M 0 20.3 M 0.675 SE 36 36 native 0.0 M 14.3 M 10.0 M 0.333 0.70 0.68 2.90 135 1.27 3.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/aa2764fd-affa-483a-a972-acaea1e61528/@@download/cross_correlation_plot/ENCFF000OUX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJF richard-myers:SL1659 ENCFF000OUX Illumina Genome Analyzer IIx 2016-12-11T03:15:12.816083+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164PVQ03697yz601ypVJ3G5 ENCSR000BHO https://www.encodeproject.org/experiments/ENCSR000BHO transcription factor TAF1-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF184PWQ https://www.encodeproject.org/files/ENCFF184PWQ/@@download/ENCFF184PWQ.bam ENCFF961JDA https://www.encodeproject.org/files/ENCFF961JDA/@@download/ENCFF961JDA.bam 20.2 M 0 16.7 M 0.829 SE 36 36 native 0.0 M 12.4 M 11.2 M 0.557 0.91 0.91 12.05 125 2.09 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cd9e38e-0002-48d7-a1e6-f7d24a6d7c2e/@@download/cross_correlation_plot/ENCFF000OVB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGO richard-myers:SL853 ENCFF000OVB Illumina Genome Analyzer IIx 2016-12-10T20:57:44.886040+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163480036969X0jJ6p3ffY2 ENCSR000BHO https://www.encodeproject.org/experiments/ENCSR000BHO transcription factor TAF1-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF315QGI https://www.encodeproject.org/files/ENCFF315QGI/@@download/ENCFF315QGI.bam ENCFF196FHM https://www.encodeproject.org/files/ENCFF196FHM/@@download/ENCFF196FHM.bam 20.5 M 0 16.1 M 0.788 SE 36 36 native 0.0 M 11.7 M 10.4 M 0.510 0.89 0.89 9.49 110 1.80 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/19a3ee55-268b-4707-9562-1687216fc15e/@@download/cross_correlation_plot/ENCFF000OVC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGP richard-myers:SL964 ENCFF000OVC Illumina Genome Analyzer IIx 2016-12-10T20:55:08.733945+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1634Gj0369BgG8x1ygv1X0p ENCSR000BLU https://www.encodeproject.org/experiments/ENCSR000BLU transcription factor TAF7-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF468ENY https://www.encodeproject.org/files/ENCFF468ENY/@@download/ENCFF468ENY.bam ENCFF625KWC https://www.encodeproject.org/files/ENCFF625KWC/@@download/ENCFF625KWC.bam 18.2 M 0 16.9 M 0.929 SE 36 36 native 0.0 M 12.2 M 11.7 M 0.644 0.96 0.96 23.85 120 1.09 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/d60b53f9-3adf-4fd7-869d-a9f4287d784e/@@download/cross_correlation_plot/ENCFF000OVI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUL richard-myers:SL2697 ENCFF000OVI Illumina Genome Analyzer IIx 2016-12-10T20:31:25.354793+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162fZ80369Bxb30J6x5bZ1X ENCSR000BLU https://www.encodeproject.org/experiments/ENCSR000BLU transcription factor TAF7-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF221YIR https://www.encodeproject.org/files/ENCFF221YIR/@@download/ENCFF221YIR.bam ENCFF624SNE https://www.encodeproject.org/files/ENCFF624SNE/@@download/ENCFF624SNE.bam 104.1 M 0 79.3 M 0.762 SE 36 36 native 0.0 M 55.4 M 39.9 M 0.383 0.72 0.71 3.24 115 1.09 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e964c5f-83f1-4928-9d31-224e59cb1975/@@download/cross_correlation_plot/ENCFF000OVV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUK richard-myers:SL3062 ENCFF000OVV HiSeq 2000 2016-12-11T00:33:48.820397+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162fk803697K4B1J71pxzY2 ENCSR000BIT https://www.encodeproject.org/experiments/ENCSR000BIT transcription factor TCF12-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF269TPC https://www.encodeproject.org/files/ENCFF269TPC/@@download/ENCFF269TPC.bam ENCFF244WMU https://www.encodeproject.org/files/ENCFF244WMU/@@download/ENCFF244WMU.bam 17.5 M 0 15.4 M 0.882 SE 36 36 native 0.0 M 11.5 M 10.6 M 0.608 0.93 0.93 13.13 125 1.13 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/1fbfcd33-504d-4448-9b32-86b1019ed1be/@@download/cross_correlation_plot/ENCFF000OVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQL richard-myers:SL1158 ENCFF000OVP Illumina Genome Analyzer IIx 2016-12-11T02:40:26.697085+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16440j0369BJyPz9fb9qXzX ENCSR000BIT https://www.encodeproject.org/experiments/ENCSR000BIT transcription factor TCF12-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF421BPV https://www.encodeproject.org/files/ENCFF421BPV/@@download/ENCFF421BPV.bam ENCFF851QUM https://www.encodeproject.org/files/ENCFF851QUM/@@download/ENCFF851QUM.bam 21.4 M 0 16.6 M 0.779 SE 36 36 native 0.0 M 12.3 M 9.9 M 0.464 0.81 0.80 4.86 100 1.30 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/1c881600-5622-4468-821b-1398e0adbd52/@@download/cross_correlation_plot/ENCFF000OVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQK richard-myers:SL1315 ENCFF000OVN Illumina Genome Analyzer IIx 2016-12-11T02:42:05.347461+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164458036993F1b953B4Q2Q ENCSR000BRY https://www.encodeproject.org/experiments/ENCSR000BRY transcription factor TEAD4-human H1-hESC stem cell richard-myers ENCODE2 pending SE "36,50" "Illumina Genome Analyzer IIx,HiSeq 2000" unreviewed ENCSR000BIU https://www.encodeproject.org/experiments/ENCSR000BIU transcription factor USF1-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF606OTI https://www.encodeproject.org/files/ENCFF606OTI/@@download/ENCFF606OTI.bam ENCFF576SZW https://www.encodeproject.org/files/ENCFF576SZW/@@download/ENCFF576SZW.bam 19.4 M 0 17.2 M 0.884 SE 36 36 native 0.0 M 12.7 M 11.5 M 0.592 0.90 0.92 12.87 115 1.92 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/abefcf6b-ef20-4b40-888f-da3fe4fa2ee1/@@download/cross_correlation_plot/ENCFF000OWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEC richard-myers:SL1159 ENCFF000OWE Illumina Genome Analyzer IIx 2016-12-10T19:59:09.319185+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162XJ003692pJ09J76g5fgK ENCSR000BIU https://www.encodeproject.org/experiments/ENCSR000BIU transcription factor USF1-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF553NXK https://www.encodeproject.org/files/ENCFF553NXK/@@download/ENCFF553NXK.bam ENCFF589RCU https://www.encodeproject.org/files/ENCFF589RCU/@@download/ENCFF589RCU.bam 21.3 M 0 18.6 M 0.874 SE 36 36 native 0.0 M 13.9 M 12.8 M 0.602 0.93 0.95 22.65 135 1.97 2.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc202e43-172f-41a9-a21f-69657ea7b40e/@@download/cross_correlation_plot/ENCFF000OWL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGR richard-myers:SL1319 ENCFF000OWL Illumina Genome Analyzer IIx 2016-12-10T20:05:59.038749+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162XVj03698ZxQY8q63X7qf ENCSR000BKD https://www.encodeproject.org/experiments/ENCSR000BKD transcription factor YY1-human H1-hESC stem cell 1 richard-myers ENCODE2 GRCh38 ENCFF489EBO https://www.encodeproject.org/files/ENCFF489EBO/@@download/ENCFF489EBO.bam ENCFF184GCE https://www.encodeproject.org/files/ENCFF184GCE/@@download/ENCFF184GCE.bam 36.9 M 0 32.7 M 0.886 SE 36 36 native 0.0 M 24.7 M 21.3 M 0.578 0.87 0.87 7.75 115 1.34 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff32b9fb-c1c6-45d1-954b-31f04f744593/@@download/cross_correlation_plot/ENCFF000OWS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUS richard-myers:SL1657 ENCFF000OWS Illumina Genome Analyzer IIx 2016-12-11T04:09:52.747853+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1656q00369BgG8x1ygv1XBy ENCSR000BKD https://www.encodeproject.org/experiments/ENCSR000BKD transcription factor YY1-human H1-hESC stem cell 2 richard-myers ENCODE2 GRCh38 ENCFF972SQO https://www.encodeproject.org/files/ENCFF972SQO/@@download/ENCFF972SQO.bam ENCFF770GTP https://www.encodeproject.org/files/ENCFF770GTP/@@download/ENCFF770GTP.bam 17.1 M 0 16.0 M 0.937 SE 36 36 native 0.0 M 11.7 M 10.2 M 0.597 0.88 0.88 8.24 155 1.63 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/24d48b81-ed38-4255-8a05-1a6d24392ff6/@@download/cross_correlation_plot/ENCFF000OWO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUT richard-myers:SL1967 ENCFF000OWO Illumina Genome Analyzer IIx 2016-12-11T04:01:44.783442+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1657000369BgG8x1ygv1XF7 ENCSR000BUG https://www.encodeproject.org/experiments/ENCSR000BUG transcription factor ATF3-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BUH https://www.encodeproject.org/experiments/ENCSR000BUH "transcription factor,chromatin remodeller,RNA binding protein" CBX3-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSD https://www.encodeproject.org/experiments/ENCSR000BSD transcription factor CEBPB-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BMK https://www.encodeproject.org/experiments/ENCSR000BMK control Control-human HCT116 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF769ESE https://www.encodeproject.org/files/ENCFF769ESE/@@download/ENCFF769ESE.bam ENCFF023KXJ https://www.encodeproject.org/files/ENCFF023KXJ/@@download/ENCFF023KXJ.bam 35.5 M 0 33.2 M 0.935 SE 36 36 native 0.0 M 25.9 M 23.2 M 0.654 0.90 0.90 9.85 -15 1.01 0.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/eaecb12d-31ea-44f6-8633-a8ba97e4ae03/@@download/cross_correlation_plot/ENCFF000PBO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDW richard-myers:SL3457 ENCFF000PBO Illumina Genome Analyzer IIx 2016-10-26T17:43:47.830387+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0825j803698F1qV3kBFq303 ENCSR000BVT https://www.encodeproject.org/experiments/ENCSR000BVT control Control-human HCT116 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF063AZH https://www.encodeproject.org/files/ENCFF063AZH/@@download/ENCFF063AZH.bam ENCFF252HWU https://www.encodeproject.org/files/ENCFF252HWU/@@download/ENCFF252HWU.bam 34.5 M 0 30.8 M 0.893 SE 50 50 native 0.0 M 24.4 M 21.1 M 0.613 0.97 0.97 30.45 110 1.09 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d77889e-09cd-41bf-bc80-30ba1a5bf53d/@@download/cross_correlation_plot/ENCFF000PBW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOK richard-myers:SL12246 ENCFF000PBW HiSeq 2000 2016-11-30T18:19:18.950315+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0yyFfQ03695541QQ897F2kX ENCSR000BVT https://www.encodeproject.org/experiments/ENCSR000BVT control Control-human HCT116 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF212COR https://www.encodeproject.org/files/ENCFF212COR/@@download/ENCFF212COR.bam ENCFF491RYT https://www.encodeproject.org/files/ENCFF491RYT/@@download/ENCFF491RYT.bam 34.0 M 0 31.2 M 0.919 SE 50 50 native 0.0 M 25.3 M 23.4 M 0.689 0.98 0.98 44.58 80 1.10 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/01ff66f0-52ee-4ae1-9428-e3a9cf78c364/@@download/cross_correlation_plot/ENCFF000PBY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMY richard-myers:SL12247 ENCFF000PBY HiSeq 2000 2016-11-30T18:19:10.911193+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0yyFq0036962XykK1Z51yj2 ENCSR000BSE https://www.encodeproject.org/experiments/ENCSR000BSE "transcription factor,RNA binding protein" CTCF-human HCT116 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF309AXU https://www.encodeproject.org/files/ENCFF309AXU/@@download/ENCFF309AXU.bam ENCFF723HYI https://www.encodeproject.org/files/ENCFF723HYI/@@download/ENCFF723HYI.bam 24.7 M 0 9.8 M 0.397 SE 50 50 native 0.0 M 8.2 M 6.9 M 0.279 0.87 0.88 8.09 130 2.21 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e1bd2fc-69ee-4a90-bd58-9e36e192fbc3/@@download/cross_correlation_plot/ENCFF000OYZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQQ richard-myers:SL12242 ENCFF000OYZ HiSeq 2000 2017-04-04T16:58:52.357693+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3VpkJ803695bqGbGb2fGy75 ENCSR000BSE https://www.encodeproject.org/experiments/ENCSR000BSE "transcription factor,RNA binding protein" CTCF-human HCT116 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF014MZL https://www.encodeproject.org/files/ENCFF014MZL/@@download/ENCFF014MZL.bam ENCFF351MMD https://www.encodeproject.org/files/ENCFF351MMD/@@download/ENCFF351MMD.bam 21.2 M 0 18.1 M 0.857 SE 50 50 native 0.0 M 15.7 M 11.9 M 0.561 0.77 0.80 5.04 135 2.61 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a9b2211-54c5-4400-af6a-e87c52992f07/@@download/cross_correlation_plot/ENCFF000OZC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQP richard-myers:SL13074 ENCFF000OZC HiSeq 2000 2017-04-04T17:00:15.790038+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3VpkV803695j3vq4f1zJ528 ENCSR000BRZ https://www.encodeproject.org/experiments/ENCSR000BRZ transcription factor EGR1-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BVH https://www.encodeproject.org/experiments/ENCSR000BVH transcription factor ELF1-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BTE https://www.encodeproject.org/experiments/ENCSR000BTE transcription factor FOSL1-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSA https://www.encodeproject.org/experiments/ENCSR000BSA transcription factor JUND-human HCT116 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF073LHY https://www.encodeproject.org/files/ENCFF073LHY/@@download/ENCFF073LHY.bam ENCFF374UIA https://www.encodeproject.org/files/ENCFF374UIA/@@download/ENCFF374UIA.bam 30.7 M 0 25.1 M 0.817 SE 50 50 native 0.0 M 21.2 M 19.9 M 0.647 0.95 0.96 23.00 130 1.27 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e587e76-f17c-49a1-95b0-95d69cafe714/@@download/cross_correlation_plot/ENCFF000PAI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVZ richard-myers:SL12233 ENCFF000PAI HiSeq 2000 2016-12-02T16:41:42.108644+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10GF200369JGQJy89KX6gyF ENCSR000BSA https://www.encodeproject.org/experiments/ENCSR000BSA transcription factor JUND-human HCT116 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF726DLQ https://www.encodeproject.org/files/ENCFF726DLQ/@@download/ENCFF726DLQ.bam ENCFF219BXD https://www.encodeproject.org/files/ENCFF219BXD/@@download/ENCFF219BXD.bam 28.8 M 0 27.5 M 0.957 SE 50 50 native 0.0 M 23.5 M 22.3 M 0.774 0.96 0.96 27.69 130 1.30 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/603ed4c0-ad53-4a35-b398-b7fe79e65379/@@download/cross_correlation_plot/ENCFF000PAH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWA richard-myers:SL13069 ENCFF000PAH HiSeq 2000 2016-11-30T18:12:55.211713+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4V4Q036970Gy1vVJYY34p ENCSR000BSH https://www.encodeproject.org/experiments/ENCSR000BSH transcription factor MAX-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BML https://www.encodeproject.org/experiments/ENCSR000BML "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human HCT116 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF701ALM https://www.encodeproject.org/files/ENCFF701ALM/@@download/ENCFF701ALM.bam ENCFF419NQM https://www.encodeproject.org/files/ENCFF419NQM/@@download/ENCFF419NQM.bam 22.6 M 0 20.8 M 0.920 SE 36 36 native 0.0 M 16.0 M 12.0 M 0.533 0.75 0.75 3.91 130 1.95 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/58446d20-32d4-4076-b4e0-27abd77da008/@@download/cross_correlation_plot/ENCFF000PBA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOT richard-myers:SL3456 ENCFF000PBA Illumina Genome Analyzer IIx 2016-12-11T04:45:36.342240+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1662v80369KQ3Yk1yz1kgyY ENCSR000BML https://www.encodeproject.org/experiments/ENCSR000BML "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human HCT116 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF472QNP https://www.encodeproject.org/files/ENCFF472QNP/@@download/ENCFF472QNP.bam ENCFF500KKR https://www.encodeproject.org/files/ENCFF500KKR/@@download/ENCFF500KKR.bam 36.4 M 0 31.0 M 0.852 SE 36 36 native 0.0 M 23.7 M 20.8 M 0.573 0.88 0.88 8.78 110 1.54 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee62565a-7f14-4f89-ade0-d1e8e686a599/@@download/cross_correlation_plot/ENCFF000PBG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOS richard-myers:SL3830 ENCFF000PBG Illumina Genome Analyzer IIx 2016-12-11T04:53:50.472079+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16631j03697yz601ypVJ3kg ENCSR000BSB https://www.encodeproject.org/experiments/ENCSR000BSB transcription factor RAD21-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BVI https://www.encodeproject.org/experiments/ENCSR000BVI "transcription factor,chromatin remodeller" REST-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSG https://www.encodeproject.org/experiments/ENCSR000BSG transcription factor SIN3A-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSF https://www.encodeproject.org/experiments/ENCSR000BSF transcription factor SP1-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSC https://www.encodeproject.org/experiments/ENCSR000BSC transcription factor SRF-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BVJ https://www.encodeproject.org/experiments/ENCSR000BVJ transcription factor TEAD4-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BVK https://www.encodeproject.org/experiments/ENCSR000BVK transcription factor USF1-human HCT116 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BNX https://www.encodeproject.org/experiments/ENCSR000BNX transcription factor YY1-human HCT116 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF495REE https://www.encodeproject.org/files/ENCFF495REE/@@download/ENCFF495REE.bam ENCFF952ERD https://www.encodeproject.org/files/ENCFF952ERD/@@download/ENCFF952ERD.bam 12.8 M 0 9.9 M 0.776 SE 36 36 native 0.0 M 7.5 M 4.6 M 0.359 0.63 0.60 2.29 100 1.86 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3b7e84a-4d6f-4a15-82a4-6e20a61fc2da/@@download/cross_correlation_plot/ENCFF000PDQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAU richard-myers:SL3971 ENCFF000PDQ Illumina Genome Analyzer IIx 2016-12-11T01:20:57.364618+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163p2Q0369KbxV61z4GFv97 ENCSR000BNX https://www.encodeproject.org/experiments/ENCSR000BNX transcription factor YY1-human HCT116 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF970MPK https://www.encodeproject.org/files/ENCFF970MPK/@@download/ENCFF970MPK.bam ENCFF529MCR https://www.encodeproject.org/files/ENCFF529MCR/@@download/ENCFF529MCR.bam 25.8 M 0 21.7 M 0.838 SE 36 36 native 0.0 M 16.7 M 11.5 M 0.446 0.70 0.69 3.03 105 1.80 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/120089a1-d03e-4c4d-9af0-d8b35296efa2/@@download/cross_correlation_plot/ENCFF000PDT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAS richard-myers:SL4500 ENCFF000PDT Illumina Genome Analyzer IIx 2016-12-11T02:12:10.284893+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163p7803692pJ09J76g5g24 ENCSR000BNY https://www.encodeproject.org/experiments/ENCSR000BNY transcription factor ZBTB33-human HCT116 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF015UAQ https://www.encodeproject.org/files/ENCFF015UAQ/@@download/ENCFF015UAQ.bam ENCFF843UFJ https://www.encodeproject.org/files/ENCFF843UFJ/@@download/ENCFF843UFJ.bam 31.4 M 0 29.0 M 0.924 SE 36 36 native 0.0 M 21.4 M 19.2 M 0.613 0.90 0.90 10.26 120 1.08 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc0a19fd-5286-454c-9107-c4e84a0067fb/@@download/cross_correlation_plot/ENCFF000PEC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWD richard-myers:SL3646 ENCFF000PEC Illumina Genome Analyzer IIx 2016-12-11T04:32:05.080714+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165ZJj0369KbxV61z4GFvfV ENCSR000BNY https://www.encodeproject.org/experiments/ENCSR000BNY transcription factor ZBTB33-human HCT116 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF131WPU https://www.encodeproject.org/files/ENCFF131WPU/@@download/ENCFF131WPU.bam ENCFF226FQN https://www.encodeproject.org/files/ENCFF226FQN/@@download/ENCFF226FQN.bam 13.6 M 0 9.7 M 0.716 SE 36 36 native 0.0 M 7.2 M 4.1 M 0.305 0.60 0.57 2.11 110 1.54 5.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1759f67-8e6b-4c7e-8b59-a00d7fe3aca7/@@download/cross_correlation_plot/ENCFF000PDZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWH richard-myers:SL3970 ENCFF000PDZ Illumina Genome Analyzer IIx 2016-12-11T04:10:26.210769+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165ZXQ03697xKX68qyy2kQv ENCSR000BMM https://www.encodeproject.org/experiments/ENCSR000BMM control Control-human HeLa-S3 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF202PGY https://www.encodeproject.org/files/ENCFF202PGY/@@download/ENCFF202PGY.bam ENCFF973ZIU https://www.encodeproject.org/files/ENCFF973ZIU/@@download/ENCFF973ZIU.bam 50.6 M 0 34.2 M 0.676 SE 36 36 native 0.0 M 22.8 M 22.5 M 0.444 0.99 0.99 77.90 95 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/f31c16a8-7dcd-49b1-accd-49c642d79919/@@download/cross_correlation_plot/ENCFF000PFD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYB richard-myers:SL592 ENCFF000PFD Illumina Genome Analyzer IIx 2016-10-26T17:36:53.790519+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082PY80369FFbbzvx9jvvyf ENCSR000BHS https://www.encodeproject.org/experiments/ENCSR000BHS transcription factor GABPA-human HeLa-S3 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF429GKZ https://www.encodeproject.org/files/ENCFF429GKZ/@@download/ENCFF429GKZ.bam ENCFF724YFZ https://www.encodeproject.org/files/ENCFF724YFZ/@@download/ENCFF724YFZ.bam 32.5 M 0 19.2 M 0.593 SE 36 36 native 0.0 M 12.5 M 11.9 M 0.367 0.95 0.96 25.45 80 1.34 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/d648e893-5fcf-4b88-88c5-82837244bafe/@@download/cross_correlation_plot/ENCFF000PEH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHD richard-myers:SL610 ENCFF000PEH Illumina Genome Analyzer IIx 2016-12-11T03:06:13.202493+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164F50036933PVVJ7Qq01Yp ENCSR000BHS https://www.encodeproject.org/experiments/ENCSR000BHS transcription factor GABPA-human HeLa-S3 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF139VJW https://www.encodeproject.org/files/ENCFF139VJW/@@download/ENCFF139VJW.bam ENCFF121LQQ https://www.encodeproject.org/files/ENCFF121LQQ/@@download/ENCFF121LQQ.bam 38.4 M 0 23.6 M 0.614 SE 36 36 native 0.0 M 15.3 M 14.7 M 0.383 0.96 0.97 43.72 115 1.38 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ecbb782-e602-4e36-a668-87e24afcb1df/@@download/cross_correlation_plot/ENCFF000PEK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHE richard-myers:SL611 ENCFF000PEK Illumina Genome Analyzer IIx 2016-12-11T03:14:49.942960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164F9j03698j1Pf95Q52xv8 ENCSR000BGO https://www.encodeproject.org/experiments/ENCSR000BGO transcription factor POLR2A-human HeLa-S3 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF436YTR https://www.encodeproject.org/files/ENCFF436YTR/@@download/ENCFF436YTR.bam ENCFF178WZP https://www.encodeproject.org/files/ENCFF178WZP/@@download/ENCFF178WZP.bam 44.4 M 0 25.9 M 0.584 SE 36 36 native 0.0 M 18.0 M 16.6 M 0.374 0.93 0.94 19.41 120 1.65 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f45a903-ff29-4be6-bee5-7b168cacec2f/@@download/cross_correlation_plot/ENCFF000PEV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKE richard-myers:SL631 ENCFF000PEV Illumina Genome Analyzer IIx 2016-12-11T03:47:10.662102+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164ZX003692BKq0F3V3jFZb ENCSR000BGO https://www.encodeproject.org/experiments/ENCSR000BGO transcription factor POLR2A-human HeLa-S3 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF141DVZ https://www.encodeproject.org/files/ENCFF141DVZ/@@download/ENCFF141DVZ.bam ENCFF869FPY https://www.encodeproject.org/files/ENCFF869FPY/@@download/ENCFF869FPY.bam 53.6 M 0 29.8 M 0.556 SE 36 36 native 0.0 M 20.9 M 18.2 M 0.340 0.87 0.91 13.72 100 2.19 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/6483d751-c650-4ee6-af4a-2b0736506a96/@@download/cross_correlation_plot/ENCFF000PFC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKD richard-myers:SL672 ENCFF000PFC Illumina Genome Analyzer IIx 2016-12-11T03:50:14.244307+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164ZfQ03692f1gp513PxgP4 ENCSR000BMN https://www.encodeproject.org/experiments/ENCSR000BMN "transcription factor,chromatin remodeller" REST-human HeLa-S3 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF355WAL https://www.encodeproject.org/files/ENCFF355WAL/@@download/ENCFF355WAL.bam ENCFF513DVS https://www.encodeproject.org/files/ENCFF513DVS/@@download/ENCFF513DVS.bam 34.0 M 0 17.1 M 0.502 SE 36 36 native 0.0 M 11.3 M 9.2 M 0.272 0.82 0.90 12.54 100 2.63 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1d9f860-56fa-4427-9c6c-a5dc0132dbb3/@@download/cross_correlation_plot/ENCFF000PEQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVK richard-myers:SL679 ENCFF000PEQ Illumina Genome Analyzer IIx 2016-12-11T00:53:32.548791+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163bJ003697xKX68qyy2kJ5 ENCSR000BMN https://www.encodeproject.org/experiments/ENCSR000BMN "transcription factor,chromatin remodeller" REST-human HeLa-S3 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF754IAO https://www.encodeproject.org/files/ENCFF754IAO/@@download/ENCFF754IAO.bam ENCFF776JIL https://www.encodeproject.org/files/ENCFF776JIL/@@download/ENCFF776JIL.bam 22.7 M 0 18.9 M 0.835 SE 36 36 native 0.0 M 14.5 M 12.3 M 0.543 0.85 0.88 9.20 130 1.77 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f2d31c5-9789-4a31-bb45-fd198ccfee6a/@@download/cross_correlation_plot/ENCFF000PEM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVL richard-myers:SL1322 ENCFF000PEM Illumina Genome Analyzer IIx 2016-12-11T00:50:00.945388+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163bX003698ZxQY8q63X83k ENCSR000BHT https://www.encodeproject.org/experiments/ENCSR000BHT transcription factor TAF1-human HeLa-S3 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF459LGD https://www.encodeproject.org/files/ENCFF459LGD/@@download/ENCFF459LGD.bam ENCFF588BOD https://www.encodeproject.org/files/ENCFF588BOD/@@download/ENCFF588BOD.bam 36.7 M 0 23.9 M 0.651 SE 36 36 native 0.0 M 16.2 M 13.7 M 0.373 0.85 0.84 6.13 110 1.15 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/522389b5-0c42-4e4f-aaba-51b9d66d91fd/@@download/cross_correlation_plot/ENCFF000PFL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQS richard-myers:SL590 ENCFF000PFL Illumina Genome Analyzer IIx 2016-12-10T19:15:49.764375+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162GJQ0369PvYp91zK1Px3X ENCSR000BHT https://www.encodeproject.org/experiments/ENCSR000BHT transcription factor TAF1-human HeLa-S3 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF367RFV https://www.encodeproject.org/files/ENCFF367RFV/@@download/ENCFF367RFV.bam ENCFF876YIT https://www.encodeproject.org/files/ENCFF876YIT/@@download/ENCFF876YIT.bam 28.1 M 0 14.2 M 0.503 SE 36 36 native 0.0 M 9.4 M 8.9 M 0.316 0.95 0.95 20.16 120 1.58 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/22c70e5a-2f83-4404-9d07-cc9c99f7d3ee/@@download/cross_correlation_plot/ENCFF000PFJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQV richard-myers:SL706 ENCFF000PFJ Illumina Genome Analyzer IIx 2016-12-10T17:40:04.836665+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162GX80369BgG8x1ygv1Vxv ENCSR000BKE https://www.encodeproject.org/experiments/ENCSR000BKE transcription factor ATF3-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF911WGI https://www.encodeproject.org/files/ENCFF911WGI/@@download/ENCFF911WGI.bam ENCFF471RBZ https://www.encodeproject.org/files/ENCFF471RBZ/@@download/ENCFF471RBZ.bam 28.5 M 0 25.5 M 0.898 SE 36 36 native 0.0 M 17.6 M 14.0 M 0.491 0.79 0.78 4.42 100 1.13 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/909812d1-e509-46e0-b8bf-96ed83ff4ad7/@@download/cross_correlation_plot/ENCFF000PFQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMI richard-myers:SL2386 ENCFF000PFQ Illumina Genome Analyzer IIx 2016-12-11T03:22:01.086328+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164VzQ0369BgG8x1ygv1X53 ENCSR000BKE https://www.encodeproject.org/experiments/ENCSR000BKE transcription factor ATF3-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF357WAY https://www.encodeproject.org/files/ENCFF357WAY/@@download/ENCFF357WAY.bam ENCFF511CYT https://www.encodeproject.org/files/ENCFF511CYT/@@download/ENCFF511CYT.bam 33.7 M 0 31.0 M 0.920 SE 36 36 native 0.0 M 23.5 M 21.3 M 0.634 0.91 0.91 10.55 140 1.05 2.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/60ef3696-3268-49c8-ad1a-87f192e8878d/@@download/cross_correlation_plot/ENCFF000PFR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHK richard-myers:SL1787 ENCFF000PFR Illumina Genome Analyzer IIx 2016-12-11T03:32:48.627594+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164X400369BJyPz9fb9qY26 ENCSR000BID https://www.encodeproject.org/experiments/ENCSR000BID transcription factor BHLHE40-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF404QMD https://www.encodeproject.org/files/ENCFF404QMD/@@download/ENCFF404QMD.bam ENCFF257GMO https://www.encodeproject.org/files/ENCFF257GMO/@@download/ENCFF257GMO.bam 27.6 M 0 22.8 M 0.825 SE 36 36 native 0.0 M 17.2 M 6.9 M 0.249 0.41 0.31 1.07 120 1.34 6.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/181798e2-7a0d-4dd0-82e2-2a3bbaa6e88c/@@download/cross_correlation_plot/ENCFF000PFY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCB richard-myers:SL1059 ENCFF000PFY Illumina Genome Analyzer IIx 2016-12-11T03:55:02.195414+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164vxQ0369PvYp91zK1PxJJ ENCSR000BID https://www.encodeproject.org/experiments/ENCSR000BID transcription factor BHLHE40-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF964ESQ https://www.encodeproject.org/files/ENCFF964ESQ/@@download/ENCFF964ESQ.bam ENCFF212NXE https://www.encodeproject.org/files/ENCFF212NXE/@@download/ENCFF212NXE.bam 30.6 M 0 27.1 M 0.885 SE 36 36 native 0.0 M 19.8 M 16.8 M 0.548 0.85 0.84 6.12 105 1.08 3.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/c1cbc43d-816f-4cf5-a1dc-4dce131391f7/@@download/cross_correlation_plot/ENCFF000PGB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KER richard-myers:SL3460 ENCFF000PGB Illumina Genome Analyzer IIx 2016-12-11T03:58:36.396729+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164x2Q0369KQ3Yk1yz1kgZ1 ENCSR819WZE https://www.encodeproject.org/experiments/ENCSR819WZE transcription factor CBX1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF261FCS https://www.encodeproject.org/files/ENCFF261FCS/@@download/ENCFF261FCS.bam ENCFF893FDD https://www.encodeproject.org/files/ENCFF893FDD/@@download/ENCFF893FDD.bam 25.8 M 0 24.6 M 0.956 SE 50 50 native 0.0 M 19.3 M 19.0 M 0.737 0.99 0.99 71.49 90 1.08 1.04 Missing ENCLB134DGZ richard-myers:SL65245 ENCFF152YWR HiSeq 2000 2016-10-09T17:09:57.558433+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3x000jv1QxJBfj5Zb2pPP ENCSR000BQI https://www.encodeproject.org/experiments/ENCSR000BQI transcription factor CEBPB-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF090KCF https://www.encodeproject.org/files/ENCFF090KCF/@@download/ENCFF090KCF.bam ENCFF906TKS https://www.encodeproject.org/files/ENCFF906TKS/@@download/ENCFF906TKS.bam 20.3 M 0 19.1 M 0.938 SE 36 36 native 0.0 M 13.7 M 12.3 M 0.606 0.90 0.89 9.29 125 1.18 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/c266d026-f488-48c1-a201-44891dbb299a/@@download/cross_correlation_plot/ENCFF000PGG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXX richard-myers:SL4209 ENCFF000PGG Illumina Genome Analyzer IIx 2016-12-11T04:19:59.195460+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165YGQ0369PvYp91zK1PxZ6 ENCSR000BQI https://www.encodeproject.org/experiments/ENCSR000BQI transcription factor CEBPB-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF499BWX https://www.encodeproject.org/files/ENCFF499BWX/@@download/ENCFF499BWX.bam ENCFF404WAE https://www.encodeproject.org/files/ENCFF404WAE/@@download/ENCFF404WAE.bam 31.7 M 0 24.4 M 0.768 SE 36 36 native 0.0 M 18.0 M 9.3 M 0.293 0.52 0.47 1.62 95 1.74 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/0b5fe5c4-fc72-41b1-b620-65fa14185e6a/@@download/cross_correlation_plot/ENCFF000PGI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBX richard-myers:SL4939 ENCFF000PGI Illumina Genome Analyzer IIx 2016-12-11T04:26:50.747608+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165YVj03695v47P6433JJ2V ENCSR000BQJ https://www.encodeproject.org/experiments/ENCSR000BQJ transcription factor CEBPD-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF091LUF https://www.encodeproject.org/files/ENCFF091LUF/@@download/ENCFF091LUF.bam ENCFF671GFD https://www.encodeproject.org/files/ENCFF671GFD/@@download/ENCFF671GFD.bam 11.5 M 0 10.1 M 0.879 SE 36 36 native 0.0 M 7.2 M 6.0 M 0.525 0.84 0.84 5.87 130 1.38 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0bc6c47-4939-482a-98ea-c872c8de7eb0/@@download/cross_correlation_plot/ENCFF000PGK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZY richard-myers:SL4210 ENCFF000PGK Illumina Genome Analyzer IIx 2016-12-10T17:50:55.650696+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162X2Q0369K8k6p8qBf9pqb ENCSR000BQJ https://www.encodeproject.org/experiments/ENCSR000BQJ transcription factor CEBPD-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF790ELF https://www.encodeproject.org/files/ENCFF790ELF/@@download/ENCFF790ELF.bam ENCFF859NNE https://www.encodeproject.org/files/ENCFF859NNE/@@download/ENCFF859NNE.bam 31.9 M 0 28.2 M 0.884 SE 36 36 native 0.0 M 20.7 M 13.0 M 0.408 0.63 0.60 2.24 110 1.16 2.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc1f4982-fb90-48ea-aa20-9c18e8193129/@@download/cross_correlation_plot/ENCFF000PGQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZZ richard-myers:SL4940 ENCFF000PGQ Illumina Genome Analyzer IIx 2016-12-10T20:16:53.113335+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162X7803698ZxQY8q63X7q9 ENCSR000BLG https://www.encodeproject.org/experiments/ENCSR000BLG control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF285LVE https://www.encodeproject.org/files/ENCFF285LVE/@@download/ENCFF285LVE.bam ENCFF760BGX https://www.encodeproject.org/files/ENCFF760BGX/@@download/ENCFF760BGX.bam 37.4 M 0 34.6 M 0.923 SE 36 36 native 0.0 M 25.7 M 25.2 M 0.673 0.99 0.99 90.95 110 1.02 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9ed328f-2e7d-4a90-af5f-8821076bcce9/@@download/cross_correlation_plot/ENCFF000POU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLN richard-myers:SL1781 ENCFF000POU Illumina Genome Analyzer IIx 2016-10-26T17:35:50.433475+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Z5803693F6GvgxF23jYp ENCSR000BLG https://www.encodeproject.org/experiments/ENCSR000BLG control Control-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF175NMQ https://www.encodeproject.org/files/ENCFF175NMQ/@@download/ENCFF175NMQ.bam ENCFF690SQN https://www.encodeproject.org/files/ENCFF690SQN/@@download/ENCFF690SQN.bam 36.7 M 0 34.4 M 0.937 SE 36 36 native 0.0 M 26.5 M 25.9 M 0.705 0.98 0.98 51.33 90 1.02 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/14fc0f4c-8c9a-497d-aed8-a731a7c1e3b8/@@download/cross_correlation_plot/ENCFF000POV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLM richard-myers:SL3976 ENCFF000POV Illumina Genome Analyzer IIx 2016-10-26T17:35:47.421248+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082ZB00369PK6yVbxF59b1q ENCSR000BLH https://www.encodeproject.org/experiments/ENCSR000BLH control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF249PQD https://www.encodeproject.org/files/ENCFF249PQD/@@download/ENCFF249PQD.bam ENCFF726LCA https://www.encodeproject.org/files/ENCFF726LCA/@@download/ENCFF726LCA.bam 38.1 M 0 19.5 M 0.512 SE 36 36 native 0.0 M 11.1 M 10.7 M 0.281 0.97 0.97 38.31 80 1.13 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/95185af5-bd24-4340-b3ec-4d1fa0e2588d/@@download/cross_correlation_plot/ENCFF000POO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSJ richard-myers:SL294 ENCFF000POO Illumina Genome Analyzer IIx 2016-10-26T17:38:49.463398+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820xQ0369PQyG3V5B44PvQ ENCSR000BLH https://www.encodeproject.org/experiments/ENCSR000BLH control Control-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF741TQN https://www.encodeproject.org/files/ENCFF741TQN/@@download/ENCFF741TQN.bam ENCFF236VIX https://www.encodeproject.org/files/ENCFF236VIX/@@download/ENCFF236VIX.bam 42.5 M 0 25.5 M 0.599 SE 36 36 native 0.0 M 15.5 M 15.1 M 0.354 0.98 0.98 58.48 95 1.14 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2e8d0e0-ef15-4680-a1a1-81d4fcf03518/@@download/cross_correlation_plot/ENCFF000POQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEI richard-myers:SL295 ENCFF000POQ Illumina Genome Analyzer IIx 2016-10-26T17:39:54.690727+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082128036923pJJqk9xzYg9 ENCSR000BLN https://www.encodeproject.org/experiments/ENCSR000BLN control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF943DZB https://www.encodeproject.org/files/ENCFF943DZB/@@download/ENCFF943DZB.bam ENCFF060SPZ https://www.encodeproject.org/files/ENCFF060SPZ/@@download/ENCFF060SPZ.bam 32.7 M 0 22.8 M 0.697 SE 36 36 native 0.0 M 15.6 M 15.3 M 0.468 0.99 0.99 93.39 85 1.03 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/f093a866-0293-45e3-a8b4-ca9dc9c7f265/@@download/cross_correlation_plot/ENCFF000POC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXM richard-myers:SL1400 ENCFF000POC Illumina Genome Analyzer IIx 2016-10-26T17:37:30.040813+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0828Xj0369BX1xqb1B808jX ENCSR000BLN https://www.encodeproject.org/experiments/ENCSR000BLN control Control-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF193YIO https://www.encodeproject.org/files/ENCFF193YIO/@@download/ENCFF193YIO.bam ENCFF030XFZ https://www.encodeproject.org/files/ENCFF030XFZ/@@download/ENCFF030XFZ.bam 98.3 M 0 32.4 M 0.329 SE 36 36 native 0.0 M 21.3 M 20.9 M 0.213 0.99 0.99 76.59 135 1.03 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/00c95dda-1a7f-49ca-a33e-fb3c41915ab5/@@download/cross_correlation_plot/ENCFF000POH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVG richard-myers:SL1401 ENCFF000POH Illumina Genome Analyzer IIx 2016-10-26T17:40:02.523242+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0828gQ036923pJJqk9xzYpP ENCSR000BPH https://www.encodeproject.org/experiments/ENCSR000BPH control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF705DPZ https://www.encodeproject.org/files/ENCFF705DPZ/@@download/ENCFF705DPZ.bam ENCFF587ORK https://www.encodeproject.org/files/ENCFF587ORK/@@download/ENCFF587ORK.bam 58.5 M 0 45.9 M 0.784 SE 36 36 native 0.0 M 32.8 M 32.2 M 0.550 0.99 0.99 97.69 85 1.01 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/331d4e25-39f6-461b-a0a9-fe65e7961f2a/@@download/cross_correlation_plot/ENCFF000PPC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUX richard-myers:SL6019 ENCFF000PPC Illumina Genome Analyzer IIx 2016-12-15T02:36:15.931182+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y3Q80369J92qZ2Bf62BX3 ENCSR000BPH https://www.encodeproject.org/experiments/ENCSR000BPH control Control-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF505NPR https://www.encodeproject.org/files/ENCFF505NPR/@@download/ENCFF505NPR.bam ENCFF357JEK https://www.encodeproject.org/files/ENCFF357JEK/@@download/ENCFF357JEK.bam 33.9 M 0 32.3 M 0.952 SE 50 50 native 0.0 M 25.9 M 24.0 M 0.708 0.98 0.99 70.39 90 1.14 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdcb4f40-94a3-4d8a-852d-8568ac879be1/@@download/cross_correlation_plot/ENCFF000PPF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUW richard-myers:SL12050 ENCFF000PPF HiSeq 2000 2016-12-15T02:18:46.737792+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y3bQ03695ZjjX2BpbFG8y ENCSR000BPH https://www.encodeproject.org/experiments/ENCSR000BPH control Control-human HepG2 immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF032FZF https://www.encodeproject.org/files/ENCFF032FZF/@@download/ENCFF032FZF.bam ENCFF764CYY https://www.encodeproject.org/files/ENCFF764CYY/@@download/ENCFF764CYY.bam 45.5 M 0 44.0 M 0.966 SE 50 50 native 0.0 M 34.9 M 32.6 M 0.715 0.99 0.99 102.61 85 1.05 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/826c0004-0237-4ac7-a56f-336f98aede8f/@@download/cross_correlation_plot/ENCFF000PPI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEJ richard-myers:SL12795 ENCFF000PPI HiSeq 2000 2016-12-15T02:38:06.888642+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F18y3pQ0369G1Z412B01V3yB ENCSR226ULX https://www.encodeproject.org/experiments/ENCSR226ULX control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF750GYK https://www.encodeproject.org/files/ENCFF750GYK/@@download/ENCFF750GYK.bam ENCFF508NJF https://www.encodeproject.org/files/ENCFF508NJF/@@download/ENCFF508NJF.bam 27.0 M 0 26.0 M 0.964 SE 50 None 0.0 M 21.4 M 20.6 M 0.765 0.99 0.99 83.73 75 1.04 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/f62fd467-ca01-40b3-88d3-5cd71608587f/@@download/cross_correlation_plot/ENCFF105CNG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB297LQW richard-myers:SL88848 ENCFF105CNG HiSeq 2000 2016-05-06T18:13:29.074677+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq8kj03690j2jgp42pQ2gX ENCSR237LVA https://www.encodeproject.org/experiments/ENCSR237LVA control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF626VZO https://www.encodeproject.org/files/ENCFF626VZO/@@download/ENCFF626VZO.bam ENCFF953KXC https://www.encodeproject.org/files/ENCFF953KXC/@@download/ENCFF953KXC.bam 43.6 M 0 42.2 M 0.970 SE 50 50 None 0.0 M 34.1 M 33.4 M 0.766 0.98 0.99 69.11 75 1.02 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/b0789cc4-affb-4c75-b8d7-e93582c8b1a5/@@download/cross_correlation_plot/ENCFF272WBE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB137PMQ richard-myers:SL68153 ENCFF272WBE HiSeq 2000 2016-05-06T18:14:46.382623+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq91Q0369PPK4xgv2b7945 ENCSR239QGH https://www.encodeproject.org/experiments/ENCSR239QGH control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF229FMX https://www.encodeproject.org/files/ENCFF229FMX/@@download/ENCFF229FMX.bam ENCFF205IMY https://www.encodeproject.org/files/ENCFF205IMY/@@download/ENCFF205IMY.bam 195.1 M 0 185.3 M 0.950 SE 76 50 50 0.0 M 151.0 M 144.3 M 0.740 0.96 0.96 25.72 70 1.01 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/52bdb7f7-d874-4f26-ab1f-75c1bce91b76/@@download/cross_correlation_plot/ENCFF302HDW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB364AJN richard-myers:SL154817 ENCFF302HDW HiSeq 2000 2017-03-15T04:04:02.373981+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F344X3Q03691Fgzb51K25q68 ENCSR239QGH https://www.encodeproject.org/experiments/ENCSR239QGH control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF892OVV https://www.encodeproject.org/files/ENCFF892OVV/@@download/ENCFF892OVV.bam ENCFF205IMY https://www.encodeproject.org/files/ENCFF205IMY/@@download/ENCFF205IMY.bam 195.1 M 0 134.6 M 0.690 SE 76 76 native 0.0 M 115.7 M 111.2 M 0.570 0.97 0.97 32.51 120 1.01 0.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4946535-db3d-454a-ba4d-251267576000/@@download/cross_correlation_plot/ENCFF302HDW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB364AJN richard-myers:SL154817 ENCFF302HDW HiSeq 2000 2016-09-20T04:35:14.948162+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ37Bj0369J1X1k41q1ygP1 ENCSR239QGH https://www.encodeproject.org/experiments/ENCSR239QGH control Control-human HepG2 immortalized cell line richard-myers ENCODE3 GRCh38 ENCFF510TFI https://www.encodeproject.org/files/ENCFF510TFI/@@download/ENCFF510TFI.bam 50 Missing 2017-03-15T17:05:41.625113+00:00 released pipeline completed ENCSR239QGH https://www.encodeproject.org/experiments/ENCSR239QGH control Control-human HepG2 immortalized cell line richard-myers ENCODE3 GRCh38 ENCFF567ZWW https://www.encodeproject.org/files/ENCFF567ZWW/@@download/ENCFF567ZWW.bam 76 Missing 2016-11-03T22:10:12.846018+00:00 released pipeline completed ENCSR240FKS https://www.encodeproject.org/experiments/ENCSR240FKS control Control-human HepG2 immortalized cell line 11 richard-myers ENCODE3 GRCh38 ENCFF715ECN https://www.encodeproject.org/files/ENCFF715ECN/@@download/ENCFF715ECN.bam ENCFF368ULS https://www.encodeproject.org/files/ENCFF368ULS/@@download/ENCFF368ULS.bam 30.4 M 0 29.3 M 0.964 SE 50 50 None 0.0 M 23.2 M 22.7 M 0.748 0.99 0.99 85.70 90 1.04 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/671dfe39-47b7-4fac-b9f6-9a527839cc83/@@download/cross_correlation_plot/ENCFF820XYY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB254VZC richard-myers:SL45976 ENCFF820XYY HiSeq 2000 2016-05-06T18:13:30.133912+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq9580369GkFPvq42zg1Q4 ENCSR290UXF https://www.encodeproject.org/experiments/ENCSR290UXF control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF167KVB https://www.encodeproject.org/files/ENCFF167KVB/@@download/ENCFF167KVB.bam ENCFF617DCM https://www.encodeproject.org/files/ENCFF617DCM/@@download/ENCFF617DCM.bam 36.5 M 0 34.1 M 0.934 SE 50 50 native 0.0 M 27.4 M 26.3 M 0.719 0.99 0.99 80.10 75 1.06 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/01bf19b1-5d10-46b9-89cc-5973cbddeae4/@@download/cross_correlation_plot/ENCFF929JZL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB895YHA richard-myers:SL87925 ENCFF929JZL HiSeq 2000 2016-09-19T22:52:46.274361+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzQ37bQ03698j0j081y1kvZ7 ENCSR313ISY https://www.encodeproject.org/experiments/ENCSR313ISY control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF602FOD https://www.encodeproject.org/files/ENCFF602FOD/@@download/ENCFF602FOD.bam ENCFF694ILQ https://www.encodeproject.org/files/ENCFF694ILQ/@@download/ENCFF694ILQ.bam 26.7 M 0 26.0 M 0.974 SE 50 None 0.0 M 21.6 M 20.9 M 0.783 0.98 0.98 65.54 65 1.03 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/95a2ca83-3bb5-439e-ae6c-7c12e9573c92/@@download/cross_correlation_plot/ENCFF151WGC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB326XDR richard-myers:SL121767 ENCFF151WGC HiSeq 2000 2016-05-06T18:13:07.339277+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqBj80369GkFPvq42zg1V2 ENCSR345EZN https://www.encodeproject.org/experiments/ENCSR345EZN control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF400VEC https://www.encodeproject.org/files/ENCFF400VEC/@@download/ENCFF400VEC.bam ENCFF880NQI https://www.encodeproject.org/files/ENCFF880NQI/@@download/ENCFF880NQI.bam 24.7 M 0 23.5 M 0.949 SE 50 50 None 0.0 M 19.0 M 18.5 M 0.748 0.99 0.99 89.72 75 1.07 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/b831f694-acfd-4795-b589-903081086ef0/@@download/cross_correlation_plot/ENCFF662ZML.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB121ZCU richard-myers:SL89748 ENCFF662ZML HiSeq 2000 2016-05-06T18:13:01.046078+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqFJ80369PPK4xgv2b797F ENCSR346XJA https://www.encodeproject.org/experiments/ENCSR346XJA control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF582CVJ https://www.encodeproject.org/files/ENCFF582CVJ/@@download/ENCFF582CVJ.bam ENCFF455PHJ https://www.encodeproject.org/files/ENCFF455PHJ/@@download/ENCFF455PHJ.bam 25.8 M 0 24.5 M 0.949 SE 50 50 None 0.0 M 19.9 M 19.6 M 0.758 0.99 0.99 85.61 95 1.01 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/f7776e1a-621a-4efc-9bc2-4e0738451637/@@download/cross_correlation_plot/ENCFF434SPH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB942ENW richard-myers:SL121448 ENCFF434SPH HiSeq 2000 2016-05-06T18:12:54.519616+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqFP003690j2jgp42pQ2q4 ENCSR381PHD https://www.encodeproject.org/experiments/ENCSR381PHD control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF035HOG https://www.encodeproject.org/files/ENCFF035HOG/@@download/ENCFF035HOG.bam ENCFF998DHJ https://www.encodeproject.org/files/ENCFF998DHJ/@@download/ENCFF998DHJ.bam 30.5 M 0 29.8 M 0.977 SE 50 50 None 0.0 M 24.2 M 23.6 M 0.773 0.99 0.99 72.97 70 1.02 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/398d1250-8915-4cdc-895c-d507d8b24f6c/@@download/cross_correlation_plot/ENCFF434XRU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB756MDK richard-myers:SL83448 ENCFF434XRU HiSeq 2000 2016-05-06T18:12:50.311737+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqG6Q036929FJGg42Xq1vF ENCSR384OZQ https://www.encodeproject.org/experiments/ENCSR384OZQ control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF733OPN https://www.encodeproject.org/files/ENCFF733OPN/@@download/ENCFF733OPN.bam ENCFF809ITR https://www.encodeproject.org/files/ENCFF809ITR/@@download/ENCFF809ITR.bam 34.5 M 0 33.1 M 0.960 SE 50 None 0.0 M 27.6 M 26.8 M 0.777 0.98 0.98 66.05 75 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/4113694a-2871-4111-822f-d00b7f94ea63/@@download/cross_correlation_plot/ENCFF160YIT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB861TXD richard-myers:SL124765 ENCFF160YIT HiSeq 2000 2016-05-06T18:12:53.280737+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqG8803690j2jgp42pQ2vk ENCSR399MAN https://www.encodeproject.org/experiments/ENCSR399MAN control Control-human HepG2 immortalized cell line 5 richard-myers ENCODE3 GRCh38 ENCFF240GRT https://www.encodeproject.org/files/ENCFF240GRT/@@download/ENCFF240GRT.bam ENCFF896YZZ https://www.encodeproject.org/files/ENCFF896YZZ/@@download/ENCFF896YZZ.bam 44.4 M 0 42.9 M 0.967 SE 50 None 0.0 M 34.8 M 33.3 M 0.750 0.98 0.98 53.00 85 1.03 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/a92d6691-b2fd-4535-b9fc-af9bc199f41a/@@download/cross_correlation_plot/ENCFF270NSD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB535AMB richard-myers:SL23149 ENCFF270NSD HiSeq 2000 2016-05-06T18:13:42.780529+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGfj0369PPK4xgv2b798j ENCSR404JRP https://www.encodeproject.org/experiments/ENCSR404JRP control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF507LMT https://www.encodeproject.org/files/ENCFF507LMT/@@download/ENCFF507LMT.bam ENCFF818DQY https://www.encodeproject.org/files/ENCFF818DQY/@@download/ENCFF818DQY.bam 29.7 M 0 28.5 M 0.960 SE 50 None 0.0 M 23.0 M 21.9 M 0.738 0.99 0.99 92.88 80 1.04 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/62135a74-c508-43a0-b0b0-2d8ed46f31ed/@@download/cross_correlation_plot/ENCFF991AEE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB962ATD richard-myers:SL36398 ENCFF991AEE HiSeq 2000 2016-05-06T18:12:46.331106+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqGjQ036986q4kkQ2Q0KV5 ENCSR476TKW https://www.encodeproject.org/experiments/ENCSR476TKW control Control-human HepG2 immortalized cell line 10 richard-myers ENCODE3 GRCh38 ENCFF506QEL https://www.encodeproject.org/files/ENCFF506QEL/@@download/ENCFF506QEL.bam ENCFF824RWI https://www.encodeproject.org/files/ENCFF824RWI/@@download/ENCFF824RWI.bam 46.5 M 0 45.1 M 0.971 SE 50 50 None 0.0 M 36.2 M 35.3 M 0.760 0.98 0.98 63.37 75 1.02 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/7de7045f-d016-4185-b98a-de057f12d00f/@@download/cross_correlation_plot/ENCFF654JMO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB452JBW richard-myers:SL57456 ENCFF654JMO HiSeq 2000 2016-05-06T18:13:01.024554+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqJpQ0369GkFPvq42zg1Zj ENCSR524VNV https://www.encodeproject.org/experiments/ENCSR524VNV control Control-human HepG2 immortalized cell line 11 richard-myers ENCODE3 GRCh38 ENCFF372RRO https://www.encodeproject.org/files/ENCFF372RRO/@@download/ENCFF372RRO.bam ENCFF456TAB https://www.encodeproject.org/files/ENCFF456TAB/@@download/ENCFF456TAB.bam 34.3 M 0 33.4 M 0.974 SE 50 50 None 0.0 M 27.1 M 26.6 M 0.773 0.99 0.99 94.89 75 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e14e209-6564-449c-9813-afc276d49e5a/@@download/cross_correlation_plot/ENCFF737ELZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB451XMW richard-myers:SL68154 ENCFF737ELZ HiSeq 2000 2016-05-06T18:12:04.575173+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKp803691Q4QQpZ2q8BZ0 ENCSR633UAP https://www.encodeproject.org/experiments/ENCSR633UAP control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF619EAZ https://www.encodeproject.org/files/ENCFF619EAZ/@@download/ENCFF619EAZ.bam ENCFF404AVI https://www.encodeproject.org/files/ENCFF404AVI/@@download/ENCFF404AVI.bam 26.4 M 0 25.6 M 0.971 SE 50 None 0.0 M 21.2 M 20.0 M 0.758 0.98 0.98 56.32 80 1.03 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/3956d208-3a17-46a5-a434-56e83ad08c5c/@@download/cross_correlation_plot/ENCFF147CMT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB761LFL richard-myers:SL121766 ENCFF147CMT HiSeq 2000 2016-05-06T18:07:57.269131+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqV9j0369GkFPvq42zg1jb ENCSR649FPL https://www.encodeproject.org/experiments/ENCSR649FPL control Control-human HepG2 immortalized cell line 5 richard-myers ENCODE3 GRCh38 ENCFF103VPA https://www.encodeproject.org/files/ENCFF103VPA/@@download/ENCFF103VPA.bam ENCFF104HQV https://www.encodeproject.org/files/ENCFF104HQV/@@download/ENCFF104HQV.bam 42.8 M 0 37.9 M 0.887 SE 50 50 None 0.0 M 30.5 M 29.4 M 0.687 0.98 0.98 52.12 80 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7ca40d3-baf5-43f4-98ae-3c35a91e9dd3/@@download/cross_correlation_plot/ENCFF002BFY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB240WIN richard-myers:SL34967 ENCFF002BFY HiSeq 2000 2016-05-06T18:08:49.859627+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqVq00369PPK4xgv2b79Jp ENCSR711HPO https://www.encodeproject.org/experiments/ENCSR711HPO control Control-human HepG2 immortalized cell line 8 richard-myers ENCODE3 GRCh38 ENCFF321TIQ https://www.encodeproject.org/files/ENCFF321TIQ/@@download/ENCFF321TIQ.bam ENCFF161TWC https://www.encodeproject.org/files/ENCFF161TWC/@@download/ENCFF161TWC.bam 44.6 M 0 37.3 M 0.837 SE 50 50 None 0.0 M 31.4 M 30.0 M 0.674 0.97 0.97 32.26 75 1.02 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/c401a20a-f58e-4ac7-ad70-2d55bc8dd55d/@@download/cross_correlation_plot/ENCFF002BFX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB860DER richard-myers:SL31888 ENCFF002BFX HiSeq 2000 2016-05-06T18:10:17.511539+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqXX00369PPK4xgv2b79Kv ENCSR716SYG https://www.encodeproject.org/experiments/ENCSR716SYG control Control-human HepG2 immortalized cell line 9 richard-myers ENCODE3 GRCh38 ENCFF894EOG https://www.encodeproject.org/files/ENCFF894EOG/@@download/ENCFF894EOG.bam ENCFF327YCT https://www.encodeproject.org/files/ENCFF327YCT/@@download/ENCFF327YCT.bam 56.4 M 0 54.5 M 0.966 SE 50 50 None 0.0 M 43.8 M 42.7 M 0.757 0.98 0.98 59.54 70 1.02 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/b475c043-eec6-4f84-b881-dc6dfd4d12bc/@@download/cross_correlation_plot/ENCFF876NBT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB425HBV richard-myers:SL57453 ENCFF876NBT HiSeq 2000 2016-05-06T18:07:54.055250+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqXpQ036929FJGg42Xq25Q ENCSR855LCA https://www.encodeproject.org/experiments/ENCSR855LCA control Control-human HepG2 immortalized cell line 9 richard-myers ENCODE3 GRCh38 ENCFF113QYJ https://www.encodeproject.org/files/ENCFF113QYJ/@@download/ENCFF113QYJ.bam ENCFF677MSU https://www.encodeproject.org/files/ENCFF677MSU/@@download/ENCFF677MSU.bam 26.3 M 0 25.1 M 0.956 SE 50 50 None 0.0 M 20.7 M 20.2 M 0.771 0.98 0.98 54.59 80 1.01 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/a20a7642-17e0-44fb-9515-87b71e89fd3a/@@download/cross_correlation_plot/ENCFF002BGD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB944OZS richard-myers:SL44340 ENCFF002BGD HiSeq 2000 2016-05-06T18:03:05.879126+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqg0003692Fy2Pk02vGVj5 ENCSR856HWY https://www.encodeproject.org/experiments/ENCSR856HWY control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF458MAH https://www.encodeproject.org/files/ENCFF458MAH/@@download/ENCFF458MAH.bam ENCFF447FCN https://www.encodeproject.org/files/ENCFF447FCN/@@download/ENCFF447FCN.bam 29.6 M 0 29.1 M 0.981 SE 50 None 0.0 M 23.6 M 23.2 M 0.781 0.98 0.98 67.71 95 1.05 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/886c96ae-eb8d-4a92-866d-2b30f8fa12c9/@@download/cross_correlation_plot/ENCFF035QZC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB950FUU richard-myers:SL124764 ENCFF035QZC HiSeq 2000 2016-05-06T18:02:59.154264+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqg2803691Q4QQpZ2q8BxQ ENCSR882VRP https://www.encodeproject.org/experiments/ENCSR882VRP control Control-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF999KIK https://www.encodeproject.org/files/ENCFF999KIK/@@download/ENCFF999KIK.bam ENCFF511VRW https://www.encodeproject.org/files/ENCFF511VRW/@@download/ENCFF511VRW.bam 23.0 M 0 21.8 M 0.947 SE 50 50 None 0.0 M 17.6 M 17.2 M 0.747 0.99 0.99 101.61 75 1.05 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/32af7e7e-a6a3-45ad-99f3-3a59b2e7e0ac/@@download/cross_correlation_plot/ENCFF255HDL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB629FFQ richard-myers:SL89747 ENCFF255HDL HiSeq 2000 2016-05-06T18:02:31.646573+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqgk803690j2jgp42pQ381 ENCSR945JOR https://www.encodeproject.org/experiments/ENCSR945JOR control Control-human HepG2 immortalized cell line 7 richard-myers ENCODE3 GRCh38 ENCFF749JIA https://www.encodeproject.org/files/ENCFF749JIA/@@download/ENCFF749JIA.bam ENCFF870ZUQ https://www.encodeproject.org/files/ENCFF870ZUQ/@@download/ENCFF870ZUQ.bam 57.2 M 0 48.5 M 0.849 SE 50 50 None 0.0 M 39.8 M 38.6 M 0.675 0.98 0.98 52.81 95 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/6dc9c351-f8e0-4300-8b5e-597a584ef7b6/@@download/cross_correlation_plot/ENCFF074CLV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB919PEG richard-myers:SL31887 ENCFF074CLV HiSeq 2000 2016-05-06T18:03:48.312460+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqk30036986q4kkQ2Q0KyK ENCSR000BVL https://www.encodeproject.org/experiments/ENCSR000BVL transcription factor CREB1-human HepG2 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR903ELW https://www.encodeproject.org/experiments/ENCSR903ELW transcription factor CREM-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF828CLY https://www.encodeproject.org/files/ENCFF828CLY/@@download/ENCFF828CLY.bam ENCFF617HTX https://www.encodeproject.org/files/ENCFF617HTX/@@download/ENCFF617HTX.bam 32.3 M 0 30.3 M 0.938 SE 50 50 native 0.0 M 25.3 M 22.3 M 0.690 0.89 0.90 9.50 180 1.13 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/320e00b3-cfab-4d7b-b5f0-931c7b5251ed/@@download/cross_correlation_plot/ENCFF779OCL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB256PEC richard-myers:SL75675 ENCFF779OCL HiSeq 2000 2016-10-09T17:00:57.984530+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Qv80jv1vY92b0GYjVG6k ENCSR903ELW https://www.encodeproject.org/experiments/ENCSR903ELW transcription factor CREM-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF731XGM https://www.encodeproject.org/files/ENCFF731XGM/@@download/ENCFF731XGM.bam ENCFF578WRZ https://www.encodeproject.org/files/ENCFF578WRZ/@@download/ENCFF578WRZ.bam 59.2 M 0 56.4 M 0.952 SE 50 50 native 0.0 M 46.6 M 42.7 M 0.721 0.93 0.93 15.76 165 1.13 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8f4d074-d7b7-4f32-8ede-d11083b50c74/@@download/cross_correlation_plot/ENCFF070RQL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB256CCC richard-myers:SL81109 ENCFF070RQL HiSeq 2000 2016-10-09T17:01:58.930528+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4QxQ0jv1XvFGkBjjfjQjk ENCSR000BIE https://www.encodeproject.org/experiments/ENCSR000BIE "transcription factor,RNA binding protein" CTCF-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF178SXE https://www.encodeproject.org/files/ENCFF178SXE/@@download/ENCFF178SXE.bam ENCFF481WJC https://www.encodeproject.org/files/ENCFF481WJC/@@download/ENCFF481WJC.bam 42.7 M 0 36.2 M 0.848 SE 36 36 native 0.0 M 28.0 M 18.4 M 0.430 0.66 0.70 3.43 85 3.15 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/14dfbe01-6b15-4308-9ed9-8985391e1611/@@download/cross_correlation_plot/ENCFF000PHG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUJ richard-myers:SL3176 ENCFF000PHG Illumina Genome Analyzer IIx 2016-12-11T06:45:24.982397+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166GKQ03695zJkyP3F892Yk ENCSR000BIE https://www.encodeproject.org/experiments/ENCSR000BIE "transcription factor,RNA binding protein" CTCF-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF435DKZ https://www.encodeproject.org/files/ENCFF435DKZ/@@download/ENCFF435DKZ.bam ENCFF341QCS https://www.encodeproject.org/files/ENCFF341QCS/@@download/ENCFF341QCS.bam 40.0 M 0 35.8 M 0.896 SE 36 36 native 0.0 M 26.8 M 20.7 M 0.519 0.77 0.77 4.28 120 1.45 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4b8fa9b-6a0c-44dc-87d7-9e4015b231a1/@@download/cross_correlation_plot/ENCFF000PHE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUI richard-myers:SL3582 ENCFF000PHE Illumina Genome Analyzer IIx 2016-12-11T06:21:35.730935+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166GZ80369KbxV61z4GFvz8 ENCSR000BMZ https://www.encodeproject.org/experiments/ENCSR000BMZ transcription factor ELF1-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF418EVV https://www.encodeproject.org/files/ENCFF418EVV/@@download/ENCFF418EVV.bam ENCFF420PHM https://www.encodeproject.org/files/ENCFF420PHM/@@download/ENCFF420PHM.bam 26.1 M 0 24.3 M 0.934 SE 36 36 native 0.0 M 18.3 M 17.1 M 0.655 0.94 0.94 18.54 115 1.38 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce8255ce-8abc-4260-baba-06ca822dfb25/@@download/cross_correlation_plot/ENCFF000PHP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEI richard-myers:SL3645 ENCFF000PHP Illumina Genome Analyzer IIx 2016-12-11T04:06:29.602653+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1655qj0369BJyPz9fb9qY7B ENCSR000BMZ https://www.encodeproject.org/experiments/ENCSR000BMZ transcription factor ELF1-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF930EXY https://www.encodeproject.org/files/ENCFF930EXY/@@download/ENCFF930EXY.bam ENCFF912KZI https://www.encodeproject.org/files/ENCFF912KZI/@@download/ENCFF912KZI.bam 23.0 M 0 21.8 M 0.947 SE 36 36 native 0.0 M 16.7 M 15.9 M 0.689 0.95 0.96 27.28 105 1.40 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/66b39bc6-a015-4993-a2f5-098f7f43a502/@@download/cross_correlation_plot/ENCFF000PHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOR richard-myers:SL3986 ENCFF000PHM Illumina Genome Analyzer IIx 2016-12-11T04:03:56.278882+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16560j03692yykb1zBpz7qj ENCSR000BLW https://www.encodeproject.org/experiments/ENCSR000BLW transcription factor EP300-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF522HWT https://www.encodeproject.org/files/ENCFF522HWT/@@download/ENCFF522HWT.bam ENCFF432SGP https://www.encodeproject.org/files/ENCFF432SGP/@@download/ENCFF432SGP.bam 30.2 M 0 27.5 M 0.912 SE 36 36 native 0.0 M 21.4 M 16.0 M 0.530 0.75 0.74 3.63 125 1.39 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/76b93db8-c5f0-4c5d-81b3-04dbc8774b8a/@@download/cross_correlation_plot/ENCFF000PMZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBF richard-myers:SL3154 ENCFF000PMZ Illumina Genome Analyzer IIx 2016-12-11T04:03:07.094442+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1651gj03697k5jKB6pJ7qx7 ENCSR000BLW https://www.encodeproject.org/experiments/ENCSR000BLW transcription factor EP300-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF246IMM https://www.encodeproject.org/files/ENCFF246IMM/@@download/ENCFF246IMM.bam ENCFF035CSV https://www.encodeproject.org/files/ENCFF035CSV/@@download/ENCFF035CSV.bam 34.2 M 0 30.9 M 0.905 SE 36 36 native 0.0 M 23.5 M 22.0 M 0.643 0.93 0.94 18.44 120 1.39 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4f53ef4-cb38-4562-afc2-9367ea4a390d/@@download/cross_correlation_plot/ENCFF000PNA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBG richard-myers:SL3644 ENCFF000PNA Illumina Genome Analyzer IIx 2016-12-11T04:05:55.490984+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1651vQ03692yykb1zBpz7pX ENCSR714YZG https://www.encodeproject.org/experiments/ENCSR714YZG transcription factor ETV4-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF970XFN https://www.encodeproject.org/files/ENCFF970XFN/@@download/ENCFF970XFN.bam ENCFF549NZM https://www.encodeproject.org/files/ENCFF549NZM/@@download/ENCFF549NZM.bam 23.8 M 0 21.5 M 0.905 SE 50 50 native 0.0 M 17.1 M 16.3 M 0.687 0.96 0.96 25.27 115 1.20 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/bdfcbd26-71ca-4fbe-838f-b90c5df0cfd0/@@download/cross_correlation_plot/ENCFF658DDY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB926VQW richard-myers:SL61365 ENCFF658DDY HiSeq 2000 2016-10-09T17:35:58.406479+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Zy80jv1zBYbxYJ5zzzfY ENCSR714YZG https://www.encodeproject.org/experiments/ENCSR714YZG transcription factor ETV4-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF914XSR https://www.encodeproject.org/files/ENCFF914XSR/@@download/ENCFF914XSR.bam ENCFF889NFY https://www.encodeproject.org/files/ENCFF889NFY/@@download/ENCFF889NFY.bam 33.0 M 0 30.7 M 0.929 SE 50 50 native 0.0 M 25.4 M 23.3 M 0.705 0.93 0.93 13.43 135 1.06 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/53ea4877-a5e3-4a27-ac20-bfe3907427e7/@@download/cross_correlation_plot/ENCFF162GLI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB682ERW richard-myers:SL81094 ENCFF162GLI HiSeq 2000 2016-10-09T17:34:04.515000+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Zzj0jv1zBYbxYJ5zzzfq ENCSR988LZG https://www.encodeproject.org/experiments/ENCSR988LZG "recombinant protein,transcription factor" FLAG-ARID4B-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF683DUA https://www.encodeproject.org/files/ENCFF683DUA/@@download/ENCFF683DUA.bam ENCFF549ISQ https://www.encodeproject.org/files/ENCFF549ISQ/@@download/ENCFF549ISQ.bam 33.4 M 0 28.2 M 0.844 SE 76 76 native 0.0 M 25.3 M 24.1 M 0.721 0.96 0.96 25.31 110 1.15 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/4bea9ee6-bf97-4404-a212-f8c2197abeb3/@@download/cross_correlation_plot/ENCFF550QWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB861TCE richard-myers:SL147693 ENCFF550QWK HiSeq 2000 2016-09-01T17:41:20.287270+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzq003694q32PPxBJ66z9 ENCSR988LZG https://www.encodeproject.org/experiments/ENCSR988LZG "recombinant protein,transcription factor" FLAG-ARID4B-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF213AJW https://www.encodeproject.org/files/ENCFF213AJW/@@download/ENCFF213AJW.bam ENCFF342QDZ https://www.encodeproject.org/files/ENCFF342QDZ/@@download/ENCFF342QDZ.bam 43.7 M 0 36.5 M 0.836 SE 76 76 native 0.0 M 32.9 M 30.8 M 0.705 0.94 0.95 19.86 115 1.24 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6815ded-ce4c-4948-abfc-781cd46e0d7f/@@download/cross_correlation_plot/ENCFF362DJJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB800OKW richard-myers:SL147694 ENCFF362DJJ HiSeq 2000 2016-10-26T16:27:37.513482+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzyQ03695YX1xgJBKFBBG ENCSR253OON https://www.encodeproject.org/experiments/ENCSR253OON "recombinant protein,transcription factor" FLAG-ATF1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF257JTU https://www.encodeproject.org/files/ENCFF257JTU/@@download/ENCFF257JTU.bam ENCFF240XUB https://www.encodeproject.org/files/ENCFF240XUB/@@download/ENCFF240XUB.bam 30.6 M 0 30.1 M 0.983 SE 50 50 native 0.0 M 24.9 M 22.8 M 0.747 0.92 0.93 13.90 180 1.09 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2706015-e7e0-4b64-8d64-f25ee1e8330b/@@download/cross_correlation_plot/ENCFF853ECX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB458EHI richard-myers:SL120606 ENCFF853ECX HiSeq 2000 2016-10-09T17:08:32.697397+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jkj0jv1zBYbxYJ5zzyxy ENCSR253OON https://www.encodeproject.org/experiments/ENCSR253OON "recombinant protein,transcription factor" FLAG-ATF1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF214NPN https://www.encodeproject.org/files/ENCFF214NPN/@@download/ENCFF214NPN.bam ENCFF014SFD https://www.encodeproject.org/files/ENCFF014SFD/@@download/ENCFF014SFD.bam 40.7 M 0 40.0 M 0.982 SE 50 50 native 0.0 M 34.0 M 30.1 M 0.738 0.90 0.90 10.02 140 1.07 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/56baa9b2-0c88-484d-9e25-310fd0bcf1e7/@@download/cross_correlation_plot/ENCFF038RNL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB350DLA richard-myers:SL120607 ENCFF038RNL HiSeq 2000 2016-10-09T17:08:42.545639+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3jq00jv1vY92b0GYjVFQG ENCSR669LCD https://www.encodeproject.org/experiments/ENCSR669LCD "transcription factor,recombinant protein" FLAG-ATF4-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF897TJD https://www.encodeproject.org/files/ENCFF897TJD/@@download/ENCFF897TJD.bam ENCFF370JWF https://www.encodeproject.org/files/ENCFF370JWF/@@download/ENCFF370JWF.bam 40.3 M 0 39.3 M 0.976 SE 50 50 native 0.0 M 32.9 M 30.9 M 0.767 0.95 0.95 20.75 105 1.04 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/f422f63f-d2af-48b5-a8c2-3852da3b7f14/@@download/cross_correlation_plot/ENCFF240REY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB613LLX richard-myers:SL121758 ENCFF240REY HiSeq 2000 2016-10-09T17:01:43.239443+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Qzj0jv1vY92b0GYjVG71 ENCSR669LCD https://www.encodeproject.org/experiments/ENCSR669LCD "transcription factor,recombinant protein" FLAG-ATF4-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF836TAY https://www.encodeproject.org/files/ENCFF836TAY/@@download/ENCFF836TAY.bam ENCFF673UNF https://www.encodeproject.org/files/ENCFF673UNF/@@download/ENCFF673UNF.bam 23.6 M 0 23.1 M 0.978 SE 50 50 native 0.0 M 19.3 M 18.5 M 0.786 0.97 0.97 31.69 100 1.06 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/43afab9c-5542-4b54-97f5-5ba2c5725515/@@download/cross_correlation_plot/ENCFF444RSD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB630UQV richard-myers:SL121759 ENCFF444RSD HiSeq 2000 2016-10-09T17:00:45.019504+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4V180jv1xPyfX78Yz4jBy ENCSR759BDG https://www.encodeproject.org/experiments/ENCSR759BDG "transcription factor,recombinant protein" FLAG-BCL6_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF317HWD https://www.encodeproject.org/files/ENCFF317HWD/@@download/ENCFF317HWD.bam ENCFF545AHU https://www.encodeproject.org/files/ENCFF545AHU/@@download/ENCFF545AHU.bam 50.8 M 0 42.7 M 0.841 SE 76 76 native 0.0 M 37.6 M 35.2 M 0.693 0.94 0.95 21.08 120 1.16 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/481bacb0-7010-4c62-8b03-239f24b24cf8/@@download/cross_correlation_plot/ENCFF914FOC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB599LVY richard-myers:SL161341 ENCFF914FOC HiSeq 2000 2016-11-07T22:16:51.350578+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqQxj03697pP8fGV9f112v ENCSR759BDG https://www.encodeproject.org/experiments/ENCSR759BDG "transcription factor,recombinant protein" FLAG-BCL6_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF408DIJ https://www.encodeproject.org/files/ENCFF408DIJ/@@download/ENCFF408DIJ.bam ENCFF359SGD https://www.encodeproject.org/files/ENCFF359SGD/@@download/ENCFF359SGD.bam 47.0 M 0 39.3 M 0.834 SE 76 76 native 0.0 M 34.4 M 32.2 M 0.684 0.94 0.95 23.73 120 1.28 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/bfe8925d-d60f-4751-9be5-2822ac305585/@@download/cross_correlation_plot/ENCFF948EZE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB885VBH richard-myers:SL161342 ENCFF948EZE HiSeq 2000 2016-11-07T22:16:07.487036+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqV2003696ZqxyXxbxfj6Z ENCSR142IGM https://www.encodeproject.org/experiments/ENCSR142IGM "transcription factor,recombinant protein" FLAG-CEBPA-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF999YSD https://www.encodeproject.org/files/ENCFF999YSD/@@download/ENCFF999YSD.bam ENCFF380VMK https://www.encodeproject.org/files/ENCFF380VMK/@@download/ENCFF380VMK.bam 56.0 M 0 47.2 M 0.844 SE 76 76 native 0.0 M 42.3 M 37.9 M 0.677 0.90 0.93 16.03 120 1.42 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/afc7763f-a419-4456-aaf8-154b5b00b1a5/@@download/cross_correlation_plot/ENCFF460NRJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB764KLS richard-myers:SL154016 ENCFF460NRJ HiSeq 2000 2016-09-01T17:45:32.333037+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V8680369B5KbZ6VQxzfvX ENCSR142IGM https://www.encodeproject.org/experiments/ENCSR142IGM "transcription factor,recombinant protein" FLAG-CEBPA-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF246NWJ https://www.encodeproject.org/files/ENCFF246NWJ/@@download/ENCFF246NWJ.bam ENCFF280VGH https://www.encodeproject.org/files/ENCFF280VGH/@@download/ENCFF280VGH.bam 34.4 M 0 29.0 M 0.844 SE 76 76 native 0.0 M 25.9 M 24.3 M 0.706 0.94 0.95 22.21 110 1.35 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/da07940b-0614-4b21-9319-8394798198de/@@download/cross_correlation_plot/ENCFF782RSZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB221ETD richard-myers:SL154017 ENCFF782RSZ HiSeq 2000 2016-09-01T17:43:48.731050+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V8B003698gB8K9bQggXbz ENCSR639IIZ https://www.encodeproject.org/experiments/ENCSR639IIZ "transcription factor,recombinant protein" FLAG-CEBPG-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF406OSZ https://www.encodeproject.org/files/ENCFF406OSZ/@@download/ENCFF406OSZ.bam ENCFF295DRI https://www.encodeproject.org/files/ENCFF295DRI/@@download/ENCFF295DRI.bam 50.6 M 0 44.1 M 0.872 SE 76 76 native 0.0 M 39.3 M 37.2 M 0.735 0.95 0.96 24.82 115 1.17 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/09e6f300-1d4c-434a-b716-3cd0ab3012d4/@@download/cross_correlation_plot/ENCFF608JCC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB549TLT richard-myers:SL149224 ENCFF608JCC HiSeq 2000 2016-09-01T17:43:36.854367+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VBZQ03692XGGzG5Qz2Z35 ENCSR639IIZ https://www.encodeproject.org/experiments/ENCSR639IIZ "transcription factor,recombinant protein" FLAG-CEBPG-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF751UYZ https://www.encodeproject.org/files/ENCFF751UYZ/@@download/ENCFF751UYZ.bam ENCFF795BPY https://www.encodeproject.org/files/ENCFF795BPY/@@download/ENCFF795BPY.bam 36.2 M 0 31.3 M 0.863 SE 76 76 native 0.0 M 27.9 M 26.5 M 0.733 0.95 0.96 28.26 110 1.24 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/cab2c754-e662-4b09-b9bb-2bfe33cf7605/@@download/cross_correlation_plot/ENCFF430LJV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB582SNX richard-myers:SL149225 ENCFF430LJV HiSeq 2000 2016-09-01T17:42:56.216814+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VBg003692XGGzG5Qz2Z3Y ENCSR331ORD https://www.encodeproject.org/experiments/ENCSR331ORD "transcription factor,recombinant protein" FLAG-CREB1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF777VSR https://www.encodeproject.org/files/ENCFF777VSR/@@download/ENCFF777VSR.bam ENCFF635CNZ https://www.encodeproject.org/files/ENCFF635CNZ/@@download/ENCFF635CNZ.bam 38.0 M 0 37.3 M 0.980 SE 50 50 native 0.0 M 31.8 M 27.8 M 0.731 0.89 0.90 10.50 175 1.16 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/dcb4a0eb-d1bf-4ea1-b3c6-17874f78124e/@@download/cross_correlation_plot/ENCFF951QJT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB247IYN richard-myers:SL120608 ENCFF951QJT HiSeq 2000 2016-10-09T16:59:33.247542+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46000jv1vY92b0GYjVFx4 ENCSR331ORD https://www.encodeproject.org/experiments/ENCSR331ORD "transcription factor,recombinant protein" FLAG-CREB1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF212FUJ https://www.encodeproject.org/files/ENCFF212FUJ/@@download/ENCFF212FUJ.bam ENCFF357IEY https://www.encodeproject.org/files/ENCFF357IEY/@@download/ENCFF357IEY.bam 45.8 M 0 45.0 M 0.982 SE 50 50 native 0.0 M 38.6 M 34.4 M 0.751 0.90 0.92 13.89 155 1.16 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c76a34d-c51e-4090-9b90-2837ab324e50/@@download/cross_correlation_plot/ENCFF517FOY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB027MOU richard-myers:SL120609 ENCFF517FOY HiSeq 2000 2016-10-09T16:59:39.802008+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv46180jv1XvFGkBjjfjQGV ENCSR670YPQ https://www.encodeproject.org/experiments/ENCSR670YPQ "transcription factor,recombinant protein" FLAG-DMAP1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF519JXW https://www.encodeproject.org/files/ENCFF519JXW/@@download/ENCFF519JXW.bam ENCFF959PDP https://www.encodeproject.org/files/ENCFF959PDP/@@download/ENCFF959PDP.bam 27.5 M 0 23.9 M 0.870 SE 76 76 native 0.0 M 21.3 M 20.5 M 0.746 0.96 0.96 28.20 90 1.07 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/1df80bb2-3009-4c3c-a0db-8fe0ed7e8c22/@@download/cross_correlation_plot/ENCFF118UPE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB577TON richard-myers:SL154036 ENCFF118UPE HiSeq 2000 2016-09-01T17:39:22.879358+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VY180369J7G5QfG344229 ENCSR670YPQ https://www.encodeproject.org/experiments/ENCSR670YPQ "transcription factor,recombinant protein" FLAG-DMAP1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF632STR https://www.encodeproject.org/files/ENCFF632STR/@@download/ENCFF632STR.bam ENCFF822PEP https://www.encodeproject.org/files/ENCFF822PEP/@@download/ENCFF822PEP.bam 40.1 M 0 35.9 M 0.896 SE 76 76 native 0.0 M 31.9 M 29.4 M 0.734 0.92 0.92 12.80 130 1.09 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ab1819c-4a7e-4d8a-9167-301d9ecf6fc4/@@download/cross_correlation_plot/ENCFF039MUL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB535RJE richard-myers:SL153355 ENCFF039MUL HiSeq 2000 2016-09-01T17:40:03.122266+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VY3j03692PkP0vj3PybBK ENCSR156CWW https://www.encodeproject.org/experiments/ENCSR156CWW "transcription factor,recombinant protein" FLAG-DNMT3B-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF070PRN https://www.encodeproject.org/files/ENCFF070PRN/@@download/ENCFF070PRN.bam ENCFF848EGL https://www.encodeproject.org/files/ENCFF848EGL/@@download/ENCFF848EGL.bam 29.4 M 0 28.2 M 0.959 SE 50 50 native 0.0 M 23.0 M 21.8 M 0.741 0.97 0.97 33.41 90 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/006fd8a3-d4bb-44d0-8976-ccea0e7de53c/@@download/cross_correlation_plot/ENCFF470IAE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB893TFK richard-myers:SL136344 ENCFF470IAE HiSeq 2000 2016-09-28T01:48:58.682879+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbQ6Gj03698YYXPy97GY7Kq ENCSR156CWW https://www.encodeproject.org/experiments/ENCSR156CWW "transcription factor,recombinant protein" FLAG-DNMT3B-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF681OPS https://www.encodeproject.org/files/ENCFF681OPS/@@download/ENCFF681OPS.bam ENCFF601XIH https://www.encodeproject.org/files/ENCFF601XIH/@@download/ENCFF601XIH.bam 27.2 M 0 26.1 M 0.959 SE 50 50 native 0.0 M 21.6 M 20.6 M 0.759 0.97 0.97 29.71 85 1.04 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/e076d06c-9934-4691-8ade-36f54cbcc4b6/@@download/cross_correlation_plot/ENCFF699XDW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB525CXR richard-myers:SL136345 ENCFF699XDW HiSeq 2000 2016-09-28T01:48:58.288827+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BzbQ6Q003693BXVvx97Jq7Kb ENCSR765MKZ https://www.encodeproject.org/experiments/ENCSR765MKZ "transcription factor,recombinant protein" FLAG-DRAP1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF094BOF https://www.encodeproject.org/files/ENCFF094BOF/@@download/ENCFF094BOF.bam ENCFF364ULF https://www.encodeproject.org/files/ENCFF364ULF/@@download/ENCFF364ULF.bam 38.8 M 0 34.8 M 0.897 SE 76 76 native 0.0 M 31.2 M 29.9 M 0.770 0.96 0.96 27.68 110 1.07 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a9244df-3d41-47fa-b12a-bd2886b8daa5/@@download/cross_correlation_plot/ENCFF128NBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB769VIZ richard-myers:SL149228 ENCFF128NBF HiSeq 2000 2016-09-01T17:43:51.348355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V9kQ03698gB8K9bQggXjG ENCSR765MKZ https://www.encodeproject.org/experiments/ENCSR765MKZ "transcription factor,recombinant protein" FLAG-DRAP1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF158DOO https://www.encodeproject.org/files/ENCFF158DOO/@@download/ENCFF158DOO.bam ENCFF043WWC https://www.encodeproject.org/files/ENCFF043WWC/@@download/ENCFF043WWC.bam 47.1 M 0 37.4 M 0.794 SE 76 76 native 0.0 M 33.6 M 32.0 M 0.681 0.96 0.96 24.54 125 1.10 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd56eb45-9c61-49e6-9798-e7fc3285eba8/@@download/cross_correlation_plot/ENCFF024PSP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB900LRO richard-myers:SL149235 ENCFF024PSP HiSeq 2000 2016-09-01T17:44:20.358301+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V9v8036922jKJP1QkzXj5 ENCSR770AOR https://www.encodeproject.org/experiments/ENCSR770AOR "transcription factor,recombinant protein" FLAG-ELF3-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF314YLR https://www.encodeproject.org/files/ENCFF314YLR/@@download/ENCFF314YLR.bam ENCFF866NMP https://www.encodeproject.org/files/ENCFF866NMP/@@download/ENCFF866NMP.bam 45.1 M 0 38.6 M 0.855 SE 76 76 native 0.0 M 34.7 M 32.3 M 0.716 0.94 0.94 15.96 110 1.12 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/29e972aa-d969-4ff2-87ed-2afa7a78f0f4/@@download/cross_correlation_plot/ENCFF873VOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB993KTG richard-myers:SL151610 ENCFF873VOO HiSeq 2000 2016-09-01T17:40:58.345877+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VX9j036931pZKbZ35BkB7 ENCSR770AOR https://www.encodeproject.org/experiments/ENCSR770AOR "transcription factor,recombinant protein" FLAG-ELF3-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF560LJI https://www.encodeproject.org/files/ENCFF560LJI/@@download/ENCFF560LJI.bam ENCFF220CFA https://www.encodeproject.org/files/ENCFF220CFA/@@download/ENCFF220CFA.bam 29.4 M 0 24.8 M 0.844 SE 76 76 native 0.0 M 22.3 M 20.8 M 0.708 0.94 0.94 17.84 115 1.14 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/c98c7a27-1c6d-444a-af6e-62c2eb148166/@@download/cross_correlation_plot/ENCFF856RPX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB566GZQ richard-myers:SL151611 ENCFF856RPX HiSeq 2000 2016-09-01T17:40:56.304517+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VXG8036934xfjxv37VJ76 ENCSR092OVN https://www.encodeproject.org/experiments/ENCSR092OVN "transcription factor,recombinant protein" FLAG-FOXA3-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF126DKX https://www.encodeproject.org/files/ENCFF126DKX/@@download/ENCFF126DKX.bam ENCFF349DVS https://www.encodeproject.org/files/ENCFF349DVS/@@download/ENCFF349DVS.bam 49.6 M 0 43.3 M 0.874 SE 76 76 native 0.0 M 38.5 M 36.3 M 0.731 0.94 0.95 19.38 125 1.17 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/8ec6fb84-2d13-4ba1-83f8-1b9808bf96d6/@@download/cross_correlation_plot/ENCFF492CBJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB252RJX richard-myers:SL151607 ENCFF492CBJ HiSeq 2000 2016-09-01T17:41:50.019566+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VK8003698gB8K9bQggXz7 ENCSR092OVN https://www.encodeproject.org/experiments/ENCSR092OVN "transcription factor,recombinant protein" FLAG-FOXA3-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF145VRC https://www.encodeproject.org/files/ENCFF145VRC/@@download/ENCFF145VRC.bam ENCFF230VSB https://www.encodeproject.org/files/ENCFF230VSB/@@download/ENCFF230VSB.bam 36.0 M 0 31.7 M 0.879 SE 76 76 native 0.0 M 28.7 M 26.6 M 0.739 0.93 0.94 15.99 135 1.22 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/b102160c-ccc3-4768-8958-af80d34a6af1/@@download/cross_correlation_plot/ENCFF807WOU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB129GYX richard-myers:SL151608 ENCFF807WOU HiSeq 2000 2016-09-01T17:41:10.454074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VKFQ036922jKJP1QkzY1k ENCSR269TNX https://www.encodeproject.org/experiments/ENCSR269TNX "transcription factor,recombinant protein" FLAG-GABP-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF092EIK https://www.encodeproject.org/files/ENCFF092EIK/@@download/ENCFF092EIK.bam ENCFF899AJU https://www.encodeproject.org/files/ENCFF899AJU/@@download/ENCFF899AJU.bam 34.7 M 0 33.0 M 0.950 SE 50 50 native 0.0 M 28.2 M 22.9 M 0.658 0.84 0.92 18.60 130 1.74 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/d733b827-1633-43cb-b5ea-a1caf15d5e5e/@@download/cross_correlation_plot/ENCFF921JLH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB850VGI richard-myers:SL87923 ENCFF921JLH HiSeq 2000 2016-09-01T17:41:04.293384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPZQ0369B5KbZ6VQxzg90 ENCSR269TNX https://www.encodeproject.org/experiments/ENCSR269TNX "transcription factor,recombinant protein" FLAG-GABP-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF895OOM https://www.encodeproject.org/files/ENCFF895OOM/@@download/ENCFF895OOM.bam ENCFF214GRW https://www.encodeproject.org/files/ENCFF214GRW/@@download/ENCFF214GRW.bam 25.4 M 0 24.4 M 0.961 SE 50 50 native 0.0 M 20.9 M 18.0 M 0.707 0.87 0.94 22.39 115 1.82 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/e61d6a23-61ae-4c22-ae0d-7dd8d3b4f204/@@download/cross_correlation_plot/ENCFF350SEQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB460TOS richard-myers:SL88832 ENCFF350SEQ HiSeq 2000 2016-09-01T17:40:25.173010+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPg00369B5KbZ6VQxzg9G ENCSR462KYU https://www.encodeproject.org/experiments/ENCSR462KYU "transcription factor,recombinant protein" FLAG-GABPB1_isoform2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF700ZPS https://www.encodeproject.org/files/ENCFF700ZPS/@@download/ENCFF700ZPS.bam ENCFF380EDB https://www.encodeproject.org/files/ENCFF380EDB/@@download/ENCFF380EDB.bam 32.3 M 0 28.9 M 0.895 SE 76 76 native 0.0 M 25.7 M 22.5 M 0.699 0.88 0.93 20.40 110 1.68 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/1adeacdc-ac34-4d68-9bc2-ecfbaf3754a6/@@download/cross_correlation_plot/ENCFF079HKK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB747QUE richard-myers:SL151951 ENCFF079HKK HiSeq 2000 2016-09-01T17:44:34.715333+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V7680369BXjkJ7GzvFpyZ ENCSR462KYU https://www.encodeproject.org/experiments/ENCSR462KYU "transcription factor,recombinant protein" FLAG-GABPB1_isoform2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF731EZN https://www.encodeproject.org/files/ENCFF731EZN/@@download/ENCFF731EZN.bam ENCFF077HRE https://www.encodeproject.org/files/ENCFF077HRE/@@download/ENCFF077HRE.bam 51.2 M 0 43.2 M 0.844 SE 76 76 native 0.0 M 36.9 M 26.2 M 0.511 0.71 0.85 8.65 190 2.07 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/a0f23844-21d3-4972-8583-b8145436cf7e/@@download/cross_correlation_plot/ENCFF104LBO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB912EJJ richard-myers:SL151952 ENCFF104LBO HiSeq 2000 2016-09-01T17:44:33.133770+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V78j0369K2Qy8BxQbP2Q0 ENCSR108TYQ https://www.encodeproject.org/experiments/ENCSR108TYQ "transcription factor,recombinant protein" FLAG-GATAD1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF603ETF https://www.encodeproject.org/files/ENCFF603ETF/@@download/ENCFF603ETF.bam ENCFF077ZGC https://www.encodeproject.org/files/ENCFF077ZGC/@@download/ENCFF077ZGC.bam 49.2 M 0 40.9 M 0.833 SE 76 76 native 0.0 M 36.5 M 34.5 M 0.702 0.95 0.96 25.26 115 1.15 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/3f39a5d8-c757-440a-94f6-3fa7531181de/@@download/cross_correlation_plot/ENCFF461VNE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB170KEE richard-myers:SL147695 ENCFF461VNE HiSeq 2000 2016-10-26T16:28:28.529382+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzQ00369FFbbzvx9jvvFG ENCSR108TYQ https://www.encodeproject.org/experiments/ENCSR108TYQ "transcription factor,recombinant protein" FLAG-GATAD1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF273QQZ https://www.encodeproject.org/files/ENCFF273QQZ/@@download/ENCFF273QQZ.bam ENCFF024FCT https://www.encodeproject.org/files/ENCFF024FCT/@@download/ENCFF024FCT.bam 52.1 M 0 43.8 M 0.840 SE 76 76 native 0.0 M 39.0 M 36.7 M 0.703 0.94 0.96 26.83 115 1.17 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/026ec9e8-0141-4b31-b3a1-f18e7c34ebe5/@@download/cross_correlation_plot/ENCFF495VRD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB935TDD richard-myers:SL147696 ENCFF495VRD HiSeq 2000 2016-10-26T16:28:37.816543+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzbj03697KPkyX9BPPpYB ENCSR925BFV https://www.encodeproject.org/experiments/ENCSR925BFV "transcription factor,recombinant protein" FLAG-GATAD2A-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF735ODV https://www.encodeproject.org/files/ENCFF735ODV/@@download/ENCFF735ODV.bam ENCFF954XER https://www.encodeproject.org/files/ENCFF954XER/@@download/ENCFF954XER.bam 32.5 M 0 29.4 M 0.904 SE 76 76 native 0.0 M 26.7 M 25.1 M 0.772 0.95 0.95 20.36 135 1.22 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/f02354e5-97c7-409e-9ef6-64b1130b0230/@@download/cross_correlation_plot/ENCFF685OLC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB989KKE richard-myers:SL149115 ENCFF685OLC HiSeq 2000 2016-09-01T17:41:07.337487+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJg003692XGGzG5Qz2Z92 ENCSR925BFV https://www.encodeproject.org/experiments/ENCSR925BFV "transcription factor,recombinant protein" FLAG-GATAD2A-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF855HUE https://www.encodeproject.org/files/ENCFF855HUE/@@download/ENCFF855HUE.bam ENCFF892XHN https://www.encodeproject.org/files/ENCFF892XHN/@@download/ENCFF892XHN.bam 40.7 M 0 36.0 M 0.885 SE 76 76 native 0.0 M 32.6 M 30.9 M 0.759 0.95 0.95 22.30 120 1.20 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf032e6e-2cee-4e40-842a-bf4d12187f66/@@download/cross_correlation_plot/ENCFF113FFZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB906EMS richard-myers:SL149116 ENCFF113FFZ HiSeq 2000 2016-09-01T17:41:22.071068+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJp00369PF1G9JJQXfYkV ENCSR745VSQ https://www.encodeproject.org/experiments/ENCSR745VSQ "transcription factor,recombinant protein" FLAG-GMEB2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF953PIE https://www.encodeproject.org/files/ENCFF953PIE/@@download/ENCFF953PIE.bam ENCFF132JHZ https://www.encodeproject.org/files/ENCFF132JHZ/@@download/ENCFF132JHZ.bam 25.2 M 0 22.7 M 0.901 SE 76 76 native 0.0 M 19.8 M 18.5 M 0.734 0.95 0.95 19.58 160 1.05 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9b96175-c35e-4438-9ed8-c9c0be08b75d/@@download/cross_correlation_plot/ENCFF096ZDV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB593SAS richard-myers:SL157914 ENCFF096ZDV HiSeq 2000 2016-09-01T17:39:51.253510+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQZ8036931pZKbZ35Bk6y ENCSR745VSQ https://www.encodeproject.org/experiments/ENCSR745VSQ "transcription factor,recombinant protein" FLAG-GMEB2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF417TWE https://www.encodeproject.org/files/ENCFF417TWE/@@download/ENCFF417TWE.bam ENCFF916QTN https://www.encodeproject.org/files/ENCFF916QTN/@@download/ENCFF916QTN.bam 24.9 M 0 21.9 M 0.878 SE 76 76 native 0.0 M 19.1 M 18.3 M 0.737 0.96 0.96 26.23 90 1.05 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9c51665-9e48-42d5-aef4-1db19cebff15/@@download/cross_correlation_plot/ENCFF158NYT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB296CNM richard-myers:SL157911 ENCFF158NYT HiSeq 2000 2016-09-01T17:40:08.936369+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQj003690KKGFqZ31BQK5 ENCSR616WEG https://www.encodeproject.org/experiments/ENCSR616WEG "recombinant protein,transcription factor" FLAG-HBP1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF684QYE https://www.encodeproject.org/files/ENCFF684QYE/@@download/ENCFF684QYE.bam ENCFF612BOB https://www.encodeproject.org/files/ENCFF612BOB/@@download/ENCFF612BOB.bam 22.1 M 0 21.3 M 0.964 SE 50 50 native 0.0 M 17.6 M 16.7 M 0.757 0.96 0.96 23.08 75 1.09 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/95781773-cc3f-43cc-bca6-5cd1c48ceff2/@@download/cross_correlation_plot/ENCFF697NYE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB841CSP richard-myers:SL140346 ENCFF697NYE HiSeq 2000 2016-10-09T17:09:08.773013+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40Kj0jv1XYYX2Fxk3f4xX ENCSR616WEG https://www.encodeproject.org/experiments/ENCSR616WEG "recombinant protein,transcription factor" FLAG-HBP1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF238MUN https://www.encodeproject.org/files/ENCFF238MUN/@@download/ENCFF238MUN.bam ENCFF531DHY https://www.encodeproject.org/files/ENCFF531DHY/@@download/ENCFF531DHY.bam 21.4 M 0 20.7 M 0.966 SE 50 50 native 0.0 M 17.0 M 16.2 M 0.757 0.96 0.96 25.87 75 1.08 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7ad0efc-fd76-4ba4-90ff-e4231c2ab604/@@download/cross_correlation_plot/ENCFF260FBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB534XPF richard-myers:SL140347 ENCFF260FBF HiSeq 2000 2016-10-09T17:08:57.790137+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv40Q80jv1vY92b0GYjVFj5 ENCSR656JZL https://www.encodeproject.org/experiments/ENCSR656JZL "transcription factor,recombinant protein" FLAG-HHEX-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF209RNM https://www.encodeproject.org/files/ENCFF209RNM/@@download/ENCFF209RNM.bam ENCFF724JVY https://www.encodeproject.org/files/ENCFF724JVY/@@download/ENCFF724JVY.bam 26.1 M 0 25.5 M 0.979 SE 50 50 native 0.0 M 20.5 M 20.2 M 0.774 0.99 0.99 78.62 95 1.06 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/32447b67-e286-406d-88db-fce8562ad18b/@@download/cross_correlation_plot/ENCFF096HOR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB897LMO richard-myers:SL124766 ENCFF096HOR HiSeq 2000 2016-10-09T17:30:50.835344+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61j00jv1q5825v91XY2zp ENCSR656JZL https://www.encodeproject.org/experiments/ENCSR656JZL "transcription factor,recombinant protein" FLAG-HHEX-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF233III https://www.encodeproject.org/files/ENCFF233III/@@download/ENCFF233III.bam ENCFF672SRH https://www.encodeproject.org/files/ENCFF672SRH/@@download/ENCFF672SRH.bam 29.6 M 0 29.1 M 0.981 SE 50 50 native 0.0 M 23.6 M 23.2 M 0.781 0.98 0.98 67.71 115 1.05 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/8df906ce-d7ef-45b5-be4d-4e0d04802f8f/@@download/cross_correlation_plot/ENCFF134IZQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB845OWQ richard-myers:SL124767 ENCFF134IZQ HiSeq 2000 2016-10-09T17:31:22.329014+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv61kj0jv1yxz42848qkV73 ENCSR528PSI https://www.encodeproject.org/experiments/ENCSR528PSI "transcription factor,recombinant protein" FLAG-HLF-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF879CUM https://www.encodeproject.org/files/ENCFF879CUM/@@download/ENCFF879CUM.bam ENCFF310ION https://www.encodeproject.org/files/ENCFF310ION/@@download/ENCFF310ION.bam 65.6 M 0 63.4 M 0.967 SE 50 50 native 0.0 M 52.0 M 48.6 M 0.741 0.94 0.96 27.04 105 1.18 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/43f4a98a-c5b3-49f9-8d29-d994bbab6ffa/@@download/cross_correlation_plot/ENCFF768KAE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB021ZZQ richard-myers:SL139975 ENCFF768KAE HiSeq 2000 2016-09-01T17:41:28.098027+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQ18036972Pf879Qbv10Z ENCSR528PSI https://www.encodeproject.org/experiments/ENCSR528PSI "transcription factor,recombinant protein" FLAG-HLF-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF207GHC https://www.encodeproject.org/files/ENCFF207GHC/@@download/ENCFF207GHC.bam ENCFF434YLV https://www.encodeproject.org/files/ENCFF434YLV/@@download/ENCFF434YLV.bam 71.5 M 0 68.7 M 0.961 SE 50 50 native 0.0 M 55.5 M 51.8 M 0.724 0.94 0.96 27.63 100 1.18 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/d62303c6-fe3f-44fa-8aa6-a8fa6ac528b3/@@download/cross_correlation_plot/ENCFF348HJC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB273ADT richard-myers:SL139976 ENCFF348HJC HiSeq 2000 2016-09-01T17:41:46.367383+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQ4j0369B5KbZ6VQxzgBX ENCSR072GJV https://www.encodeproject.org/experiments/ENCSR072GJV "transcription factor,recombinant protein" FLAG-HMG20A-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF045LKN https://www.encodeproject.org/files/ENCFF045LKN/@@download/ENCFF045LKN.bam ENCFF637CQD https://www.encodeproject.org/files/ENCFF637CQD/@@download/ENCFF637CQD.bam 30.2 M 0 27.9 M 0.924 SE 76 76 native 0.0 M 25.3 M 24.0 M 0.794 0.95 0.95 22.01 135 1.20 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ed0d949-3803-48b1-854d-c197b1631f12/@@download/cross_correlation_plot/ENCFF261LRY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB188SDQ richard-myers:SL157922 ENCFF261LRY HiSeq 2000 2016-09-01T17:39:55.315929+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VVYj0369J7G5QfG3441zz ENCSR072GJV https://www.encodeproject.org/experiments/ENCSR072GJV "transcription factor,recombinant protein" FLAG-HMG20A-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF742QEL https://www.encodeproject.org/files/ENCFF742QEL/@@download/ENCFF742QEL.bam ENCFF954QTJ https://www.encodeproject.org/files/ENCFF954QTJ/@@download/ENCFF954QTJ.bam 46.0 M 0 38.5 M 0.837 SE 76 76 native 0.0 M 33.8 M 32.0 M 0.696 0.95 0.95 18.93 90 1.04 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/0891d31a-7093-44f0-899e-1e7f9675a0ea/@@download/cross_correlation_plot/ENCFF402KIC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB844QNI richard-myers:SL151579 ENCFF402KIC HiSeq 2000 2016-09-01T17:40:45.689422+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VVfj0369B9J6bgQ3717f2 ENCSR925QAW https://www.encodeproject.org/experiments/ENCSR925QAW "transcription factor,recombinant protein" FLAG-HMG20B_isoform2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF557TWG https://www.encodeproject.org/files/ENCFF557TWG/@@download/ENCFF557TWG.bam ENCFF789PFR https://www.encodeproject.org/files/ENCFF789PFR/@@download/ENCFF789PFR.bam 43.0 M 0 39.3 M 0.915 SE 76 76 native 0.0 M 34.5 M 32.9 M 0.765 0.95 0.95 21.96 105 1.04 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/c3021108-dc65-4d71-bb3c-b67b8d90fff7/@@download/cross_correlation_plot/ENCFF510RGT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB600ZOL richard-myers:SL156649 ENCFF510RGT HiSeq 2000 2016-09-01T17:41:33.722101+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VKk80369PF1G9JJQXfYq1 ENCSR925QAW https://www.encodeproject.org/experiments/ENCSR925QAW "transcription factor,recombinant protein" FLAG-HMG20B_isoform2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF940MCJ https://www.encodeproject.org/files/ENCFF940MCJ/@@download/ENCFF940MCJ.bam ENCFF040RXW https://www.encodeproject.org/files/ENCFF040RXW/@@download/ENCFF040RXW.bam 41.2 M 0 37.2 M 0.905 SE 76 76 native 0.0 M 32.7 M 31.1 M 0.755 0.95 0.95 20.61 90 1.04 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/f46d0454-de40-45c4-9ca6-c011ad6584db/@@download/cross_correlation_plot/ENCFF713JRT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB030SDF richard-myers:SL156650 ENCFF713JRT HiSeq 2000 2016-09-01T17:41:22.476004+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VKv8036922jKJP1QkzY2X ENCSR117CHD https://www.encodeproject.org/experiments/ENCSR117CHD "transcription factor,recombinant protein" FLAG-HOMEZ-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF195MMC https://www.encodeproject.org/files/ENCFF195MMC/@@download/ENCFF195MMC.bam ENCFF859NCC https://www.encodeproject.org/files/ENCFF859NCC/@@download/ENCFF859NCC.bam 24.9 M 0 22.4 M 0.900 SE 76 76 native 0.0 M 20.2 M 19.2 M 0.772 0.96 0.96 24.91 125 1.14 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/d76d93d3-79d3-44aa-8216-7b25b6603149/@@download/cross_correlation_plot/ENCFF403YQE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB099HKO richard-myers:SL143422 ENCFF403YQE HiSeq 2000 2016-10-26T16:27:00.725048+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zxp8036923z1QYVBPkpkG ENCSR117CHD https://www.encodeproject.org/experiments/ENCSR117CHD "transcription factor,recombinant protein" FLAG-HOMEZ-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF371LTF https://www.encodeproject.org/files/ENCFF371LTF/@@download/ENCFF371LTF.bam ENCFF282RXE https://www.encodeproject.org/files/ENCFF282RXE/@@download/ENCFF282RXE.bam 32.5 M 0 28.9 M 0.889 SE 76 76 native 0.0 M 26.0 M 24.8 M 0.764 0.96 0.96 26.32 105 1.05 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/480d3cbf-4117-4f14-b0da-34f62df45439/@@download/cross_correlation_plot/ENCFF064SPT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB749JVK richard-myers:SL143423 ENCFF064SPT HiSeq 2000 2016-10-26T16:27:12.554133+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zxyj036923z1QYVBPkpkg ENCSR954KIC https://www.encodeproject.org/experiments/ENCSR954KIC "transcription factor,recombinant protein" FLAG-KAT8-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF469ZEQ https://www.encodeproject.org/files/ENCFF469ZEQ/@@download/ENCFF469ZEQ.bam ENCFF883KKU https://www.encodeproject.org/files/ENCFF883KKU/@@download/ENCFF883KKU.bam 43.9 M 0 38.6 M 0.880 SE 76 76 native 0.0 M 34.8 M 31.5 M 0.719 0.91 0.92 11.82 110 1.13 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb598211-1a80-4df1-b533-6ed7f516c41d/@@download/cross_correlation_plot/ENCFF679POI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB797RKD richard-myers:SL151586 ENCFF679POI HiSeq 2000 2016-09-01T17:44:42.381502+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V7180369BXjkJ7GzvFpy6 ENCSR954KIC https://www.encodeproject.org/experiments/ENCSR954KIC "transcription factor,recombinant protein" FLAG-KAT8-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF705PYY https://www.encodeproject.org/files/ENCFF705PYY/@@download/ENCFF705PYY.bam ENCFF319QGL https://www.encodeproject.org/files/ENCFF319QGL/@@download/ENCFF319QGL.bam 27.9 M 0 24.9 M 0.893 SE 76 76 native 0.0 M 22.5 M 20.5 M 0.734 0.92 0.92 12.73 135 1.15 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/0105618d-3afd-4dd7-b50c-0454c3095830/@@download/cross_correlation_plot/ENCFF695OMH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB436MYU richard-myers:SL151587 ENCFF695OMH HiSeq 2000 2016-09-01T17:44:41.707113+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V73j0369K2Qy8BxQbP2PZ ENCSR087NSR https://www.encodeproject.org/experiments/ENCSR087NSR "transcription factor,recombinant protein" FLAG-KDM1A-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF930GGN https://www.encodeproject.org/files/ENCFF930GGN/@@download/ENCFF930GGN.bam ENCFF858XHV https://www.encodeproject.org/files/ENCFF858XHV/@@download/ENCFF858XHV.bam 31.5 M 0 25.8 M 0.817 SE 76 76 native 0.0 M 22.4 M 21.7 M 0.689 0.97 0.97 34.97 95 1.06 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc09ee69-f5c7-4281-bb5a-ec9e3b2cc1dd/@@download/cross_correlation_plot/ENCFF842KVM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB783ZPL richard-myers:SL143406 ENCFF842KVM HiSeq 2000 2016-09-01T17:45:25.924500+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zyxj0369BX1xqb1B8080F ENCSR087NSR https://www.encodeproject.org/experiments/ENCSR087NSR "transcription factor,recombinant protein" FLAG-KDM1A-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF189RMF https://www.encodeproject.org/files/ENCFF189RMF/@@download/ENCFF189RMF.bam ENCFF265GNF https://www.encodeproject.org/files/ENCFF265GNF/@@download/ENCFF265GNF.bam 28.1 M 0 24.2 M 0.859 SE 76 76 native 0.0 M 21.4 M 20.8 M 0.740 0.98 0.98 42.36 100 1.05 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/50b229cf-97d4-4575-bc45-7c59814d3ea3/@@download/cross_correlation_plot/ENCFF300QMB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB125ZMG richard-myers:SL143407 ENCFF300QMB HiSeq 2000 2016-09-01T17:43:36.026504+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zz2803697KPkyX9BPPpXy ENCSR031ING https://www.encodeproject.org/experiments/ENCSR031ING "transcription factor,recombinant protein" FLAG-KDM6A-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF787VIZ https://www.encodeproject.org/files/ENCFF787VIZ/@@download/ENCFF787VIZ.bam ENCFF963EMV https://www.encodeproject.org/files/ENCFF963EMV/@@download/ENCFF963EMV.bam 25.1 M 0 22.7 M 0.903 SE 76 76 native 0.0 M 20.3 M 19.4 M 0.774 0.96 0.96 28.05 110 1.05 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/776e8bcf-6218-41c3-9af8-d92eb7f32508/@@download/cross_correlation_plot/ENCFF767XIJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB332RET richard-myers:SL143424 ENCFF767XIJ HiSeq 2000 2016-10-26T16:27:21.896209+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zx7j03695140QP5B2vf77 ENCSR031ING https://www.encodeproject.org/experiments/ENCSR031ING "transcription factor,recombinant protein" FLAG-KDM6A-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF891QAW https://www.encodeproject.org/files/ENCFF891QAW/@@download/ENCFF891QAW.bam ENCFF152VYM https://www.encodeproject.org/files/ENCFF152VYM/@@download/ENCFF152VYM.bam 30.0 M 0 26.3 M 0.874 SE 76 76 native 0.0 M 23.0 M 22.3 M 0.742 0.97 0.97 35.06 100 1.04 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/569a7a82-ff56-49b6-a32e-17f811297746/@@download/cross_correlation_plot/ENCFF599YZI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB995YMN richard-myers:SL143425 ENCFF599YZI HiSeq 2000 2016-10-26T16:27:38.179974+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zxG003697KPkyX9BPPpQz ENCSR616OSG https://www.encodeproject.org/experiments/ENCSR616OSG "transcription factor,recombinant protein" FLAG-KLF11-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF515VII https://www.encodeproject.org/files/ENCFF515VII/@@download/ENCFF515VII.bam ENCFF851EKN https://www.encodeproject.org/files/ENCFF851EKN/@@download/ENCFF851EKN.bam 45.9 M 0 37.8 M 0.824 SE 76 76 native 0.0 M 33.8 M 32.3 M 0.703 0.96 0.96 26.63 105 1.03 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/99f5df96-6847-4c9a-88c6-844abb5064de/@@download/cross_correlation_plot/ENCFF425ZYO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB168WKQ richard-myers:SL147683 ENCFF425ZYO HiSeq 2000 2016-10-26T16:29:08.958322+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08003j0369KPb3j15B4p877 ENCSR616OSG https://www.encodeproject.org/experiments/ENCSR616OSG "transcription factor,recombinant protein" FLAG-KLF11-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF450IPE https://www.encodeproject.org/files/ENCFF450IPE/@@download/ENCFF450IPE.bam ENCFF428GPR https://www.encodeproject.org/files/ENCFF428GPR/@@download/ENCFF428GPR.bam 45.5 M 0 39.9 M 0.877 SE 76 76 native 0.0 M 35.7 M 33.5 M 0.735 0.95 0.95 20.08 90 1.03 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/6ef4e9a3-6363-4c05-ae1c-ed3891128cc4/@@download/cross_correlation_plot/ENCFF937ICR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB209BQN richard-myers:SL147684 ENCFF937ICR HiSeq 2000 2016-10-26T16:27:39.730918+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08009Q0369FFbbzvx9jvvJ1 ENCSR009KLQ https://www.encodeproject.org/experiments/ENCSR009KLQ "transcription factor,recombinant protein" FLAG-KLF16-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF749BIB https://www.encodeproject.org/files/ENCFF749BIB/@@download/ENCFF749BIB.bam ENCFF425CBA https://www.encodeproject.org/files/ENCFF425CBA/@@download/ENCFF425CBA.bam 57.2 M 0 50.2 M 0.878 SE 76 76 native 0.0 M 44.8 M 41.7 M 0.729 0.93 0.94 15.31 100 1.04 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/622d778c-62be-4265-a068-f64fd143678c/@@download/cross_correlation_plot/ENCFF380TFO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB044QPM richard-myers:SL151595 ENCFF380TFO HiSeq 2000 2016-09-01T17:42:21.928647+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJ6003692XGGzG5Qz2Z80 ENCSR009KLQ https://www.encodeproject.org/experiments/ENCSR009KLQ "transcription factor,recombinant protein" FLAG-KLF16-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF236OFH https://www.encodeproject.org/files/ENCFF236OFH/@@download/ENCFF236OFH.bam ENCFF102DQG https://www.encodeproject.org/files/ENCFF102DQG/@@download/ENCFF102DQG.bam 49.3 M 0 41.6 M 0.844 SE 76 76 native 0.0 M 37.4 M 33.6 M 0.681 0.91 0.91 11.18 90 1.08 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/ceddf350-a5cb-4d1f-a9fb-b1a5c5964b17/@@download/cross_correlation_plot/ENCFF264ZXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB928EMT richard-myers:SL151596 ENCFF264ZXH HiSeq 2000 2016-09-01T17:41:51.761712+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJ8j03692XGGzG5Qz2Z89 ENCSR757EKM https://www.encodeproject.org/experiments/ENCSR757EKM "transcription factor,recombinant protein" FLAG-KLF6_isoform2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF266IKT https://www.encodeproject.org/files/ENCFF266IKT/@@download/ENCFF266IKT.bam ENCFF723RGN https://www.encodeproject.org/files/ENCFF723RGN/@@download/ENCFF723RGN.bam 31.8 M 0 27.4 M 0.860 SE 76 76 native 0.0 M 24.4 M 22.7 M 0.714 0.94 0.94 16.60 95 1.05 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/9750383f-f424-4ba1-942f-b5f577a87cb0/@@download/cross_correlation_plot/ENCFF762ILJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB116FAA richard-myers:SL151597 ENCFF762ILJ HiSeq 2000 2016-09-01T17:39:57.647643+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VXfj036934xfjxv37VJ7g ENCSR757EKM https://www.encodeproject.org/experiments/ENCSR757EKM "transcription factor,recombinant protein" FLAG-KLF6_isoform2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF407QSA https://www.encodeproject.org/files/ENCFF407QSA/@@download/ENCFF407QSA.bam ENCFF496MEG https://www.encodeproject.org/files/ENCFF496MEG/@@download/ENCFF496MEG.bam 30.6 M 0 25.9 M 0.847 SE 76 76 native 0.0 M 23.2 M 21.4 M 0.699 0.94 0.94 15.45 95 1.06 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/c23f3fa2-23ec-4abf-bef6-61c81096d2a9/@@download/cross_correlation_plot/ENCFF633ZLO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB189WAI richard-myers:SL151598 ENCFF633ZLO HiSeq 2000 2016-09-01T17:39:41.349223+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VXk003690KKGFqZ31BQQ1 ENCSR938ETG https://www.encodeproject.org/experiments/ENCSR938ETG "transcription factor,recombinant protein" FLAG-KLF9-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF507NBQ https://www.encodeproject.org/files/ENCFF507NBQ/@@download/ENCFF507NBQ.bam ENCFF688VTW https://www.encodeproject.org/files/ENCFF688VTW/@@download/ENCFF688VTW.bam 31.2 M 0 27.7 M 0.887 SE 76 76 native 0.0 M 24.7 M 23.5 M 0.752 0.96 0.96 24.86 90 1.03 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d772d4c-e984-4370-96f3-5a5dfba5981a/@@download/cross_correlation_plot/ENCFF351KCG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB896AAV richard-myers:SL149226 ENCFF351KCG HiSeq 2000 2016-09-01T17:40:40.144819+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPk80369BXjkJ7GzvFqBy ENCSR938ETG https://www.encodeproject.org/experiments/ENCSR938ETG "transcription factor,recombinant protein" FLAG-KLF9-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF028QZW https://www.encodeproject.org/files/ENCFF028QZW/@@download/ENCFF028QZW.bam ENCFF875XUT https://www.encodeproject.org/files/ENCFF875XUT/@@download/ENCFF875XUT.bam 27.0 M 0 23.9 M 0.885 SE 76 76 native 0.0 M 21.2 M 20.0 M 0.741 0.96 0.96 24.78 90 1.03 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e3ddc46-1df2-495c-baca-8bdcb3fe6615/@@download/cross_correlation_plot/ENCFF795MVM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB990TDM richard-myers:SL149227 ENCFF795MVM HiSeq 2000 2016-09-01T17:40:37.379626+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPvj0369PF1G9JJQXfYxy ENCSR071YVR https://www.encodeproject.org/experiments/ENCSR071YVR "transcription factor,recombinant protein" FLAG-KMT2B-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF436OMA https://www.encodeproject.org/files/ENCFF436OMA/@@download/ENCFF436OMA.bam ENCFF411DVO https://www.encodeproject.org/files/ENCFF411DVO/@@download/ENCFF411DVO.bam 44.0 M 0 38.1 M 0.866 SE 76 76 native 0.0 M 34.1 M 32.4 M 0.738 0.96 0.96 23.56 100 1.06 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/3cfe0889-840b-4053-8467-f53ea5c037b9/@@download/cross_correlation_plot/ENCFF247HTV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB179PZW richard-myers:SL147685 ENCFF247HTV HiSeq 2000 2016-10-26T16:28:04.068499+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zvb0036923pJJqk9xzY9g ENCSR071YVR https://www.encodeproject.org/experiments/ENCSR071YVR "transcription factor,recombinant protein" FLAG-KMT2B-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF123DYP https://www.encodeproject.org/files/ENCFF123DYP/@@download/ENCFF123DYP.bam ENCFF573YRY https://www.encodeproject.org/files/ENCFF573YRY/@@download/ENCFF573YRY.bam 43.7 M 0 37.6 M 0.859 SE 76 76 native 0.0 M 33.5 M 31.8 M 0.728 0.96 0.96 24.02 100 1.09 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/86f427ef-6e63-4433-80d6-105d9051b6c6/@@download/cross_correlation_plot/ENCFF714SGI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB913TIQ richard-myers:SL147686 ENCFF714SGI HiSeq 2000 2016-10-26T16:28:55.845101+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zvkQ03699pQzk2JB6K7F8 ENCSR396QWK https://www.encodeproject.org/experiments/ENCSR396QWK "transcription factor,recombinant protein" FLAG-MBD1_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF056OXH https://www.encodeproject.org/files/ENCFF056OXH/@@download/ENCFF056OXH.bam ENCFF915XNP https://www.encodeproject.org/files/ENCFF915XNP/@@download/ENCFF915XNP.bam 31.6 M 0 30.6 M 0.968 SE 50 50 native 0.0 M 25.3 M 24.4 M 0.773 0.97 0.97 37.45 75 1.04 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c529cd5-e6ac-4ddc-a34a-985151845b95/@@download/cross_correlation_plot/ENCFF707YEY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB679JUZ richard-myers:SL136340 ENCFF707YEY HiSeq 2000 2016-10-09T17:01:46.801618+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47z00jv1XYYX2Fxk3f56b ENCSR396QWK https://www.encodeproject.org/experiments/ENCSR396QWK "transcription factor,recombinant protein" FLAG-MBD1_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF615LVR https://www.encodeproject.org/files/ENCFF615LVR/@@download/ENCFF615LVR.bam ENCFF249FGE https://www.encodeproject.org/files/ENCFF249FGE/@@download/ENCFF249FGE.bam 23.5 M 0 22.5 M 0.960 SE 50 50 native 0.0 M 18.8 M 17.9 M 0.764 0.97 0.97 32.35 80 1.06 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/62c82b24-304f-4937-892f-3d0057eaad07/@@download/cross_correlation_plot/ENCFF690UNT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB478VON richard-myers:SL136341 ENCFF690UNT HiSeq 2000 2016-10-09T17:01:13.050089+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48080jv1XvFGkBjjfjQPb ENCSR260UJI https://www.encodeproject.org/experiments/ENCSR260UJI "transcription factor,recombinant protein" FLAG-MBD1_isoform2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF655ZAY https://www.encodeproject.org/files/ENCFF655ZAY/@@download/ENCFF655ZAY.bam ENCFF279IGS https://www.encodeproject.org/files/ENCFF279IGS/@@download/ENCFF279IGS.bam 31.0 M 0 29.7 M 0.960 SE 50 50 native 0.0 M 24.4 M 23.4 M 0.756 0.97 0.97 30.95 90 1.05 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/27102986-65a7-46e1-aed4-0f29cc1847b2/@@download/cross_correlation_plot/ENCFF617BUV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB151EUV richard-myers:SL136342 ENCFF617BUV HiSeq 2000 2016-10-26T16:27:14.878486+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zz6j0369KPb3j15B4p86j ENCSR260UJI https://www.encodeproject.org/experiments/ENCSR260UJI "transcription factor,recombinant protein" FLAG-MBD1_isoform2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF445RPP https://www.encodeproject.org/files/ENCFF445RPP/@@download/ENCFF445RPP.bam ENCFF847VNA https://www.encodeproject.org/files/ENCFF847VNA/@@download/ENCFF847VNA.bam 30.7 M 0 29.3 M 0.956 SE 50 50 native 0.0 M 24.2 M 22.9 M 0.746 0.96 0.96 23.33 85 1.06 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/7320137f-0ff5-439b-ba64-727fcc117643/@@download/cross_correlation_plot/ENCFF844LMK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB672LUN richard-myers:SL136343 ENCFF844LMK HiSeq 2000 2016-10-26T16:27:05.040991+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzG003699pQzk2JB6K7G9 ENCSR115PIK https://www.encodeproject.org/experiments/ENCSR115PIK "transcription factor,recombinant protein" FLAG-MIER2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF446MDK https://www.encodeproject.org/files/ENCFF446MDK/@@download/ENCFF446MDK.bam ENCFF973CTS https://www.encodeproject.org/files/ENCFF973CTS/@@download/ENCFF973CTS.bam 46.8 M 0 41.4 M 0.884 SE 76 76 native 0.0 M 36.7 M 33.9 M 0.724 0.93 0.93 14.28 100 1.06 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f824a5a-161f-49ba-816c-1d25aa46d0ec/@@download/cross_correlation_plot/ENCFF919DQH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB744NPM richard-myers:SL156657 ENCFF919DQH HiSeq 2000 2016-09-01T17:42:41.632173+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VG7j0369PF1G9JJQXfYgQ ENCSR115PIK https://www.encodeproject.org/experiments/ENCSR115PIK "transcription factor,recombinant protein" FLAG-MIER2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF294QEI https://www.encodeproject.org/files/ENCFF294QEI/@@download/ENCFF294QEI.bam ENCFF372GAL https://www.encodeproject.org/files/ENCFF372GAL/@@download/ENCFF372GAL.bam 40.1 M 0 36.6 M 0.914 SE 76 76 native 0.0 M 32.6 M 30.5 M 0.760 0.94 0.94 17.57 110 1.09 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/94374dfa-9382-4a69-b20c-6a76c78dc01e/@@download/cross_correlation_plot/ENCFF962ZIJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB336ZDC richard-myers:SL156658 ENCFF962ZIJ HiSeq 2000 2016-09-01T17:42:01.234080+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VGBj036922jKJP1QkzXyj ENCSR531VIJ https://www.encodeproject.org/experiments/ENCSR531VIJ "transcription factor,recombinant protein" FLAG-MIER3-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF023XMW https://www.encodeproject.org/files/ENCFF023XMW/@@download/ENCFF023XMW.bam ENCFF703SXU https://www.encodeproject.org/files/ENCFF703SXU/@@download/ENCFF703SXU.bam 33.0 M 0 27.8 M 0.841 SE 76 76 native 0.0 M 24.8 M 23.2 M 0.703 0.94 0.94 16.48 110 1.10 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb48c316-4a21-4db3-a883-11f72cccf2d5/@@download/cross_correlation_plot/ENCFF823JNT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB190WGO richard-myers:SL153360 ENCFF823JNT HiSeq 2000 2016-09-01T17:41:37.213098+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VG300369BXjkJ7GzvFq5k ENCSR531VIJ https://www.encodeproject.org/experiments/ENCSR531VIJ "transcription factor,recombinant protein" FLAG-MIER3-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF924HFP https://www.encodeproject.org/files/ENCFF924HFP/@@download/ENCFF924HFP.bam ENCFF848JSC https://www.encodeproject.org/files/ENCFF848JSC/@@download/ENCFF848JSC.bam 31.2 M 0 26.8 M 0.860 SE 76 76 native 0.0 M 23.6 M 22.0 M 0.704 0.95 0.95 17.98 100 1.04 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/850f4dc8-8856-4a53-8ba2-30f9fb7f5c21/@@download/cross_correlation_plot/ENCFF352WCY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB508ODW richard-myers:SL153361 ENCFF352WCY HiSeq 2000 2016-09-01T17:41:32.939862+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VG580369PF1G9JJQXfYg8 ENCSR966PJY https://www.encodeproject.org/experiments/ENCSR966PJY "transcription factor,recombinant protein" FLAG-MIXL1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF862HYK https://www.encodeproject.org/files/ENCFF862HYK/@@download/ENCFF862HYK.bam ENCFF249BPW https://www.encodeproject.org/files/ENCFF249BPW/@@download/ENCFF249BPW.bam 44.8 M 0 39.1 M 0.873 SE 76 76 native 0.0 M 35.0 M 33.3 M 0.743 0.96 0.96 22.99 110 1.05 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/01188469-7a7b-4261-81a0-b6600e3f3c3e/@@download/cross_correlation_plot/ENCFF790RMU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB275ULF richard-myers:SL149236 ENCFF790RMU HiSeq 2000 2016-09-01T17:40:27.695979+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VXqQ03690KKGFqZ31BQQ9 ENCSR966PJY https://www.encodeproject.org/experiments/ENCSR966PJY "transcription factor,recombinant protein" FLAG-MIXL1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF567OGN https://www.encodeproject.org/files/ENCFF567OGN/@@download/ENCFF567OGN.bam ENCFF664MWU https://www.encodeproject.org/files/ENCFF664MWU/@@download/ENCFF664MWU.bam 34.0 M 0 30.0 M 0.883 SE 76 76 native 0.0 M 26.9 M 25.8 M 0.758 0.96 0.96 27.61 100 1.08 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/2179f024-f4d8-4dbf-82ca-c6a703e85862/@@download/cross_correlation_plot/ENCFF616WVB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB128AOL richard-myers:SL149229 ENCFF616WVB HiSeq 2000 2016-09-01T17:40:01.438695+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VXxj036934xfjxv37VJ8K ENCSR125DAD https://www.encodeproject.org/experiments/ENCSR125DAD "transcription factor,recombinant protein" FLAG-MLX-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF707MEF https://www.encodeproject.org/files/ENCFF707MEF/@@download/ENCFF707MEF.bam ENCFF838RHI https://www.encodeproject.org/files/ENCFF838RHI/@@download/ENCFF838RHI.bam 39.9 M 0 35.0 M 0.875 SE 76 76 native 0.0 M 30.9 M 29.7 M 0.742 0.96 0.96 28.52 90 1.05 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/04b5652b-9dba-45fe-92a4-a8318af8fcb2/@@download/cross_correlation_plot/ENCFF771RGQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB534QJG richard-myers:SL149230 ENCFF771RGQ HiSeq 2000 2016-09-01T17:43:11.801540+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VBv8036922jKJP1QkzXp3 ENCSR125DAD https://www.encodeproject.org/experiments/ENCSR125DAD "transcription factor,recombinant protein" FLAG-MLX-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF405FFP https://www.encodeproject.org/files/ENCFF405FFP/@@download/ENCFF405FFP.bam ENCFF138ZVN https://www.encodeproject.org/files/ENCFF138ZVN/@@download/ENCFF138ZVN.bam 32.9 M 0 29.5 M 0.897 SE 76 76 native 0.0 M 26.0 M 24.5 M 0.746 0.96 0.96 23.28 90 1.04 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a31e04e-63c4-4fd0-b48a-5637d3c68442/@@download/cross_correlation_plot/ENCFF082XMQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB639JEY richard-myers:SL149231 ENCFF082XMQ HiSeq 2000 2016-09-01T17:43:24.550014+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VBzQ036922jKJP1QkzXpZ ENCSR909GJR https://www.encodeproject.org/experiments/ENCSR909GJR "transcription factor,recombinant protein" FLAG-MXD3_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF919VWI https://www.encodeproject.org/files/ENCFF919VWI/@@download/ENCFF919VWI.bam ENCFF666VJD https://www.encodeproject.org/files/ENCFF666VJD/@@download/ENCFF666VJD.bam 29.9 M 0 26.8 M 0.898 SE 76 76 native 0.0 M 23.8 M 22.7 M 0.758 0.95 0.95 21.65 120 1.13 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c106a44-65bc-4fd6-8e4f-9a1063f23de0/@@download/cross_correlation_plot/ENCFF204UTF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB411XFS richard-myers:SL151956 ENCFF204UTF HiSeq 2000 2016-09-01T17:40:49.653007+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VKYQ036922jKJP1QkzY23 ENCSR909GJR https://www.encodeproject.org/experiments/ENCSR909GJR "transcription factor,recombinant protein" FLAG-MXD3_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF230UKQ https://www.encodeproject.org/files/ENCFF230UKQ/@@download/ENCFF230UKQ.bam ENCFF833YVO https://www.encodeproject.org/files/ENCFF833YVO/@@download/ENCFF833YVO.bam 60.6 M 0 50.7 M 0.837 SE 76 76 native 0.0 M 40.5 M 34.0 M 0.562 0.85 0.85 6.48 135 1.04 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/f48b8f59-a3aa-4aee-a8ba-e3db93646cac/@@download/cross_correlation_plot/ENCFF380ESC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB397AVJ richard-myers:SL153374 ENCFF380ESC HiSeq 2000 2016-09-01T17:42:47.979074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VKf80369B5KbZ6VQxzg7J ENCSR441KFW https://www.encodeproject.org/experiments/ENCSR441KFW "transcription factor,recombinant protein" FLAG-MXD4-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF247ZPI https://www.encodeproject.org/files/ENCFF247ZPI/@@download/ENCFF247ZPI.bam ENCFF888HFJ https://www.encodeproject.org/files/ENCFF888HFJ/@@download/ENCFF888HFJ.bam 70.1 M 0 58.5 M 0.834 SE 76 76 native 0.0 M 48.7 M 40.5 M 0.578 0.85 0.85 6.67 120 1.04 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/eab7f849-f52b-4f26-8cb4-4e8ea51eb469/@@download/cross_correlation_plot/ENCFF480HVG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB368KIR richard-myers:SL153375 ENCFF480HVG HiSeq 2000 2016-09-01T17:42:44.202695+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VGJQ03692XGGzG5Qz2Z6j ENCSR441KFW https://www.encodeproject.org/experiments/ENCSR441KFW "transcription factor,recombinant protein" FLAG-MXD4-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF656SPV https://www.encodeproject.org/files/ENCFF656SPV/@@download/ENCFF656SPV.bam ENCFF489NGO https://www.encodeproject.org/files/ENCFF489NGO/@@download/ENCFF489NGO.bam 36.0 M 0 31.3 M 0.868 SE 76 76 native 0.0 M 27.7 M 25.9 M 0.720 0.94 0.94 17.59 100 1.07 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/416055b7-085a-4da3-88e7-804f772f9232/@@download/cross_correlation_plot/ENCFF393OKM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB730TQT richard-myers:SL153376 ENCFF393OKM HiSeq 2000 2016-09-01T17:41:30.894825+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VGQ003698gB8K9bQggXx2 ENCSR226QQM https://www.encodeproject.org/experiments/ENCSR226QQM "transcription factor,recombinant protein" FLAG-NFIA_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF290GQR https://www.encodeproject.org/files/ENCFF290GQR/@@download/ENCFF290GQR.bam ENCFF118WFV https://www.encodeproject.org/files/ENCFF118WFV/@@download/ENCFF118WFV.bam 41.2 M 0 37.4 M 0.908 SE 76 76 native 0.0 M 32.8 M 31.3 M 0.758 0.96 0.96 24.23 115 1.08 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee846b00-c2fc-49bb-9f3b-a79d30f7d04e/@@download/cross_correlation_plot/ENCFF784EQQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB464JUW richard-myers:SL156664 ENCFF784EQQ HiSeq 2000 2016-09-01T17:41:17.965104+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPXj03698gB8K9bQggY11 ENCSR226QQM https://www.encodeproject.org/experiments/ENCSR226QQM "transcription factor,recombinant protein" FLAG-NFIA_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF109RLL https://www.encodeproject.org/files/ENCFF109RLL/@@download/ENCFF109RLL.bam ENCFF664VVG https://www.encodeproject.org/files/ENCFF664VVG/@@download/ENCFF664VVG.bam 45.8 M 0 40.9 M 0.893 SE 76 76 native 0.0 M 36.6 M 33.7 M 0.735 0.92 0.93 14.48 125 1.19 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/471764a2-5c73-45cd-bcc2-0a2fd8abcd4a/@@download/cross_correlation_plot/ENCFF908GXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB937WLY richard-myers:SL156668 ENCFF908GXH HiSeq 2000 2016-09-01T17:41:39.612237+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPbQ036922jKJP1QkzY44 ENCSR201GGK https://www.encodeproject.org/experiments/ENCSR201GGK "transcription factor,recombinant protein" FLAG-NFIL3-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF431XUQ https://www.encodeproject.org/files/ENCFF431XUQ/@@download/ENCFF431XUQ.bam ENCFF238YWI https://www.encodeproject.org/files/ENCFF238YWI/@@download/ENCFF238YWI.bam 30.4 M 0 25.8 M 0.849 SE 76 76 native 0.0 M 23.0 M 21.8 M 0.719 0.95 0.95 22.17 115 1.18 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/91b2b35b-07e9-48eb-ba2f-19284d3d78e1/@@download/cross_correlation_plot/ENCFF170AOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB523LQM richard-myers:SL154025 ENCFF170AOL HiSeq 2000 2016-10-26T16:26:57.940315+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0800j00369BqVfYq19ZB8Qk ENCSR201GGK https://www.encodeproject.org/experiments/ENCSR201GGK "transcription factor,recombinant protein" FLAG-NFIL3-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF847EMM https://www.encodeproject.org/files/ENCFF847EMM/@@download/ENCFF847EMM.bam ENCFF627NHL https://www.encodeproject.org/files/ENCFF627NHL/@@download/ENCFF627NHL.bam 31.7 M 0 26.4 M 0.832 SE 76 76 native 0.0 M 23.6 M 22.1 M 0.697 0.94 0.94 19.81 115 1.41 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/2749bccb-45c5-4d60-9f05-0553f826eb92/@@download/cross_correlation_plot/ENCFF149FLF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB348HSQ richard-myers:SL154026 ENCFF149FLF HiSeq 2000 2016-10-26T16:27:46.919203+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0800xQ0369KxbFbzV9pvv8V ENCSR569ARC https://www.encodeproject.org/experiments/ENCSR569ARC "transcription factor,recombinant protein" FLAG-NFYC-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF379WXQ https://www.encodeproject.org/files/ENCFF379WXQ/@@download/ENCFF379WXQ.bam ENCFF050LPC https://www.encodeproject.org/files/ENCFF050LPC/@@download/ENCFF050LPC.bam 50.5 M 0 43.0 M 0.851 SE 76 76 native 0.0 M 37.9 M 35.4 M 0.701 0.94 0.96 26.27 130 1.16 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/ebfe4150-3df6-4b93-8ff1-1412a086be44/@@download/cross_correlation_plot/ENCFF536WLP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB299DNH richard-myers:SL149222 ENCFF536WLP HiSeq 2000 2016-09-01T17:44:01.802418+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VBP80369PF1G9JJQXfYYQ ENCSR569ARC https://www.encodeproject.org/experiments/ENCSR569ARC "transcription factor,recombinant protein" FLAG-NFYC-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF049VHY https://www.encodeproject.org/files/ENCFF049VHY/@@download/ENCFF049VHY.bam ENCFF226HDF https://www.encodeproject.org/files/ENCFF226HDF/@@download/ENCFF226HDF.bam 57.3 M 0 50.4 M 0.879 SE 76 76 native 0.0 M 44.9 M 41.2 M 0.719 0.92 0.94 20.17 140 1.15 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/30518828-eff0-4d9c-b882-812bd025940e/@@download/cross_correlation_plot/ENCFF117DNV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB017FXZ richard-myers:SL149223 ENCFF117DNV HiSeq 2000 2016-09-01T17:44:18.237493+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VBX00369PF1G9JJQXfYYv ENCSR662EOU https://www.encodeproject.org/experiments/ENCSR662EOU "transcription factor,recombinant protein" FLAG-NR2F1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF178FQM https://www.encodeproject.org/files/ENCFF178FQM/@@download/ENCFF178FQM.bam ENCFF617JCI https://www.encodeproject.org/files/ENCFF617JCI/@@download/ENCFF617JCI.bam 31.1 M 0 25.8 M 0.827 SE 76 76 native 0.0 M 22.5 M 21.5 M 0.691 0.96 0.96 23.90 110 1.08 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf6da293-2b03-4340-a1cd-032df73b4698/@@download/cross_correlation_plot/ENCFF911VFY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB592IAP richard-myers:SL151581 ENCFF911VFY HiSeq 2000 2016-09-01T17:41:27.214781+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJ0Q0369K2Qy8BxQbP2j2 ENCSR662EOU https://www.encodeproject.org/experiments/ENCSR662EOU "transcription factor,recombinant protein" FLAG-NR2F1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF785WJN https://www.encodeproject.org/files/ENCFF785WJN/@@download/ENCFF785WJN.bam ENCFF587OET https://www.encodeproject.org/files/ENCFF587OET/@@download/ENCFF587OET.bam 31.9 M 0 28.6 M 0.898 SE 76 76 native 0.0 M 25.1 M 24.3 M 0.762 0.97 0.97 33.72 110 1.04 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/be8788ce-6378-43d7-9467-564eba69beb7/@@download/cross_correlation_plot/ENCFF325WEY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB572UAB richard-myers:SL157896 ENCFF325WEY HiSeq 2000 2016-09-01T17:41:04.486544+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJ3Q03692XGGzG5Qz2Z7j ENCSR798IJO https://www.encodeproject.org/experiments/ENCSR798IJO "transcription factor,recombinant protein" FLAG-NR2F6-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF471KSC https://www.encodeproject.org/files/ENCFF471KSC/@@download/ENCFF471KSC.bam ENCFF612OKW https://www.encodeproject.org/files/ENCFF612OKW/@@download/ENCFF612OKW.bam 32.1 M 0 26.4 M 0.821 SE 76 76 native 0.0 M 23.5 M 22.5 M 0.701 0.96 0.96 30.07 115 1.29 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/47fac3a7-f4a6-4aa7-9b60-dcfdf8715f59/@@download/cross_correlation_plot/ENCFF862ZWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB663KEA richard-myers:SL147687 ENCFF862ZWK HiSeq 2000 2016-09-01T17:39:28.585693+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zvJ00369GJ6xQfbB7BjkJ ENCSR798IJO https://www.encodeproject.org/experiments/ENCSR798IJO "transcription factor,recombinant protein" FLAG-NR2F6-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF399MTG https://www.encodeproject.org/files/ENCFF399MTG/@@download/ENCFF399MTG.bam ENCFF158MII https://www.encodeproject.org/files/ENCFF158MII/@@download/ENCFF158MII.bam 29.0 M 0 24.7 M 0.854 SE 76 76 native 0.0 M 21.8 M 21.0 M 0.724 0.96 0.96 27.79 120 1.14 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/81ec6a7e-280d-4d9e-8d2f-c9b1a946cc18/@@download/cross_correlation_plot/ENCFF095AEN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB046LLH richard-myers:SL147688 ENCFF095AEN HiSeq 2000 2016-09-01T17:39:33.250881+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zvV00369GJ6xQfbB7Bjkf ENCSR327RFM https://www.encodeproject.org/experiments/ENCSR327RFM "transcription factor,recombinant protein" FLAG-PAF1_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF456NWN https://www.encodeproject.org/files/ENCFF456NWN/@@download/ENCFF456NWN.bam ENCFF954XYL https://www.encodeproject.org/files/ENCFF954XYL/@@download/ENCFF954XYL.bam 43.1 M 0 38.4 M 0.892 SE 76 76 native 0.0 M 33.8 M 32.6 M 0.756 0.97 0.97 29.38 90 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0d362ab-de04-489a-8b6e-3c7032455b15/@@download/cross_correlation_plot/ENCFF896YTL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB508WXR richard-myers:SL156651 ENCFF896YTL HiSeq 2000 2016-09-01T17:43:57.926049+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VB900369PF1G9JJQXfYXk ENCSR327RFM https://www.encodeproject.org/experiments/ENCSR327RFM "transcription factor,recombinant protein" FLAG-PAF1_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF331YOR https://www.encodeproject.org/files/ENCFF331YOR/@@download/ENCFF331YOR.bam ENCFF616OOK https://www.encodeproject.org/files/ENCFF616OOK/@@download/ENCFF616OOK.bam 42.3 M 0 37.6 M 0.889 SE 76 76 native 0.0 M 33.2 M 32.1 M 0.758 0.97 0.97 32.83 95 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/58c3cf7d-7741-49c1-acd3-64c60c3bcb89/@@download/cross_correlation_plot/ENCFF294AGC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB825XMK richard-myers:SL156652 ENCFF294AGC HiSeq 2000 2016-09-01T17:44:11.385905+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VBG80369PF1G9JJQXfYY5 ENCSR849DFF https://www.encodeproject.org/experiments/ENCSR849DFF "transcription factor,recombinant protein" FLAG-PBX2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF347VYQ https://www.encodeproject.org/files/ENCFF347VYQ/@@download/ENCFF347VYQ.bam ENCFF866XQJ https://www.encodeproject.org/files/ENCFF866XQJ/@@download/ENCFF866XQJ.bam 25.6 M 0 25.0 M 0.977 SE 50 50 native 0.0 M 20.5 M 19.9 M 0.776 0.97 0.98 54.15 130 1.11 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/e034a456-5dd1-4a1d-b075-ff033dd156e6/@@download/cross_correlation_plot/ENCFF967ZPY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB692OAU richard-myers:SL124768 ENCFF967ZPY HiSeq 2000 2016-10-09T17:05:12.112104+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv696j0jv1XQK7ZK9053Xjb ENCSR849DFF https://www.encodeproject.org/experiments/ENCSR849DFF "transcription factor,recombinant protein" FLAG-PBX2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF430JGU https://www.encodeproject.org/files/ENCFF430JGU/@@download/ENCFF430JGU.bam ENCFF763CXZ https://www.encodeproject.org/files/ENCFF763CXZ/@@download/ENCFF763CXZ.bam 25.1 M 0 24.4 M 0.972 SE 50 50 native 0.0 M 20.3 M 19.6 M 0.779 0.97 0.97 42.33 135 1.09 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/5df79823-af1b-4542-bdd6-45729d55052c/@@download/cross_correlation_plot/ENCFF395VGH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB243CMP richard-myers:SL124769 ENCFF395VGH HiSeq 2000 2016-10-09T17:05:15.733617+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv698j0jv1jG2Qk7JXpxvZk ENCSR130VQL https://www.encodeproject.org/experiments/ENCSR130VQL "transcription factor,recombinant protein" FLAG-PPARG_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF065ROU https://www.encodeproject.org/files/ENCFF065ROU/@@download/ENCFF065ROU.bam ENCFF871LGL https://www.encodeproject.org/files/ENCFF871LGL/@@download/ENCFF871LGL.bam 46.9 M 0 39.2 M 0.835 SE 76 76 native 0.0 M 35.0 M 32.2 M 0.687 0.93 0.93 15.18 95 1.08 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/85eeae88-cbca-48c4-9ef7-890c4152617d/@@download/cross_correlation_plot/ENCFF764SMY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB260LVJ richard-myers:SL156119 ENCFF764SMY HiSeq 2000 2016-09-01T17:45:22.001165+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V7PQ03698gB8K9bQggXZ8 ENCSR130VQL https://www.encodeproject.org/experiments/ENCSR130VQL "transcription factor,recombinant protein" FLAG-PPARG_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF913AGP https://www.encodeproject.org/files/ENCFF913AGP/@@download/ENCFF913AGP.bam ENCFF071IQV https://www.encodeproject.org/files/ENCFF071IQV/@@download/ENCFF071IQV.bam 41.7 M 0 34.9 M 0.837 SE 76 76 native 0.0 M 31.1 M 29.1 M 0.698 0.94 0.94 18.15 110 1.09 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/af1bc2d4-d26f-4566-8675-705da0b5432e/@@download/cross_correlation_plot/ENCFF660VHF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB659AMP richard-myers:SL156120 ENCFF660VHF HiSeq 2000 2016-09-01T17:45:05.287722+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V7XQ036972Pf879Qbv0Yk ENCSR054FKH https://www.encodeproject.org/experiments/ENCSR054FKH "transcription factor,recombinant protein" FLAG-RAD21-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF346ENH https://www.encodeproject.org/files/ENCFF346ENH/@@download/ENCFF346ENH.bam ENCFF970PZO https://www.encodeproject.org/files/ENCFF970PZO/@@download/ENCFF970PZO.bam 26.9 M 0 26.0 M 0.967 SE 50 50 native 0.0 M 22.3 M 20.1 M 0.748 0.91 0.93 19.44 100 2.13 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/b467307f-8a64-4932-96eb-a88344f7881c/@@download/cross_correlation_plot/ENCFF822AJG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB721MOB richard-myers:SL88833 ENCFF822AJG HiSeq 2000 2016-10-09T16:59:39.064775+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44Z80jv1XvFGkBjjfjQF4 ENCSR054FKH https://www.encodeproject.org/experiments/ENCSR054FKH "transcription factor,recombinant protein" FLAG-RAD21-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF200WCM https://www.encodeproject.org/files/ENCFF200WCM/@@download/ENCFF200WCM.bam ENCFF280INZ https://www.encodeproject.org/files/ENCFF280INZ/@@download/ENCFF280INZ.bam 22.5 M 0 21.8 M 0.968 SE 50 50 native 0.0 M 18.7 M 17.0 M 0.754 0.91 0.94 20.35 100 2.34 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/2b0c27e4-64cf-4dae-9b8c-ee7398274f17/@@download/cross_correlation_plot/ENCFF801MAM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB429UUM richard-myers:SL88834 ENCFF801MAM HiSeq 2000 2016-10-09T16:59:32.750119+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44f00jv1xPyfX78Yz4j0y ENCSR500WXT https://www.encodeproject.org/experiments/ENCSR500WXT "transcription factor,recombinant protein" FLAG-RARA-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF649MWS https://www.encodeproject.org/files/ENCFF649MWS/@@download/ENCFF649MWS.bam ENCFF109LMR https://www.encodeproject.org/files/ENCFF109LMR/@@download/ENCFF109LMR.bam 39.0 M 0 31.5 M 0.808 SE 76 76 native 0.0 M 28.1 M 25.7 M 0.659 0.92 0.93 14.37 125 1.37 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/7526d344-bf9a-4544-9268-c1978ffbedb4/@@download/cross_correlation_plot/ENCFF308NXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB225NHS richard-myers:SL153368 ENCFF308NXH HiSeq 2000 2016-09-01T17:40:31.611849+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VX400369B9J6bgQ3717fV ENCSR500WXT https://www.encodeproject.org/experiments/ENCSR500WXT "transcription factor,recombinant protein" FLAG-RARA-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF591JSQ https://www.encodeproject.org/files/ENCFF591JSQ/@@download/ENCFF591JSQ.bam ENCFF601TEC https://www.encodeproject.org/files/ENCFF601TEC/@@download/ENCFF601TEC.bam 33.4 M 0 27.8 M 0.832 SE 76 76 native 0.0 M 24.9 M 22.9 M 0.687 0.92 0.93 14.41 130 1.34 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/05a0fc82-b8ef-4139-a9ea-ceccd3052535/@@download/cross_correlation_plot/ENCFF320DMI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB468THC richard-myers:SL153369 ENCFF320DMI HiSeq 2000 2016-09-01T17:40:11.768539+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VX700369Gv3z1jv33VzkP ENCSR455DOO https://www.encodeproject.org/experiments/ENCSR455DOO "transcription factor,recombinant protein" FLAG-RCOR2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF191DNO https://www.encodeproject.org/files/ENCFF191DNO/@@download/ENCFF191DNO.bam ENCFF665GTT https://www.encodeproject.org/files/ENCFF665GTT/@@download/ENCFF665GTT.bam 31.0 M 0 27.9 M 0.901 SE 76 76 native 0.0 M 24.9 M 23.8 M 0.767 0.96 0.96 24.23 105 1.07 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/cac0b766-6994-4cca-8d0b-49351c8fcea1/@@download/cross_correlation_plot/ENCFF040QAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB828EVG richard-myers:SL157906 ENCFF040QAY HiSeq 2000 2016-09-01T17:40:17.435107+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VY700369Gv3z1jv33Vzq2 ENCSR455DOO https://www.encodeproject.org/experiments/ENCSR455DOO "transcription factor,recombinant protein" FLAG-RCOR2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF330XIE https://www.encodeproject.org/files/ENCFF330XIE/@@download/ENCFF330XIE.bam ENCFF148ZQD https://www.encodeproject.org/files/ENCFF148ZQD/@@download/ENCFF148ZQD.bam 28.4 M 0 26.1 M 0.917 SE 76 76 native 0.0 M 23.3 M 21.3 M 0.751 0.92 0.92 12.59 120 1.06 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/07669734-7f0c-409f-bf5a-a3c69b153497/@@download/cross_correlation_plot/ENCFF763NHP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB240FQM richard-myers:SL157909 ENCFF763NHP HiSeq 2000 2016-09-01T17:39:33.835708+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VYB0036934xfjxv37VJ8q ENCSR988ZSI https://www.encodeproject.org/experiments/ENCSR988ZSI "transcription factor,recombinant protein" FLAG-RERE-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF328AHJ https://www.encodeproject.org/files/ENCFF328AHJ/@@download/ENCFF328AHJ.bam ENCFF971RLJ https://www.encodeproject.org/files/ENCFF971RLJ/@@download/ENCFF971RLJ.bam 27.3 M 0 23.1 M 0.848 SE 76 76 native 0.0 M 20.3 M 19.6 M 0.719 0.97 0.97 36.01 100 1.04 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f50fb20-ed91-4161-9f96-b204747376c2/@@download/cross_correlation_plot/ENCFF266MCK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB443GCQ richard-myers:SL143428 ENCFF266MCK HiSeq 2000 2016-10-26T16:27:24.736249+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zxQQ03695140QP5B2vf7Q ENCSR988ZSI https://www.encodeproject.org/experiments/ENCSR988ZSI "transcription factor,recombinant protein" FLAG-RERE-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF033VMH https://www.encodeproject.org/files/ENCFF033VMH/@@download/ENCFF033VMH.bam ENCFF045AUV https://www.encodeproject.org/files/ENCFF045AUV/@@download/ENCFF045AUV.bam 28.0 M 0 24.6 M 0.881 SE 76 76 native 0.0 M 22.0 M 21.1 M 0.756 0.97 0.97 30.03 115 1.05 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/e60b6c9c-7c70-43c1-a222-a69420e4ede6/@@download/cross_correlation_plot/ENCFF811ZQF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB536XKW richard-myers:SL143429 ENCFF811ZQF HiSeq 2000 2016-09-01T17:43:24.058824+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zxbj03694q32PPxBJ66pQ ENCSR633OVO https://www.encodeproject.org/experiments/ENCSR633OVO "transcription factor,recombinant protein" FLAG-RFX3_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF685WAA https://www.encodeproject.org/files/ENCFF685WAA/@@download/ENCFF685WAA.bam ENCFF681PWS https://www.encodeproject.org/files/ENCFF681PWS/@@download/ENCFF681PWS.bam 45.3 M 0 41.1 M 0.908 SE 76 76 native 0.0 M 36.1 M 34.4 M 0.760 0.96 0.96 24.36 100 1.03 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/22eae743-4da5-4f64-ab55-9c1bb14fd9b8/@@download/cross_correlation_plot/ENCFF383FTW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB077XDH richard-myers:SL159324 ENCFF383FTW HiSeq 2000 2016-11-07T22:16:00.154396+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqV8Q036983pPGVkbbXpZ4 ENCSR633OVO https://www.encodeproject.org/experiments/ENCSR633OVO "transcription factor,recombinant protein" FLAG-RFX3_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF553QXD https://www.encodeproject.org/files/ENCFF553QXD/@@download/ENCFF553QXD.bam ENCFF437BCQ https://www.encodeproject.org/files/ENCFF437BCQ/@@download/ENCFF437BCQ.bam 50.4 M 0 43.4 M 0.862 SE 76 76 native 0.0 M 38.4 M 36.8 M 0.730 0.96 0.96 27.01 110 1.04 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/23c3b118-de9a-415e-a821-565514f13a28/@@download/cross_correlation_plot/ENCFF068PBQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB019UPX richard-myers:SL159325 ENCFF068PBQ HiSeq 2000 2016-11-07T22:15:59.203084+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqVGQ0369JPjx18ZBVfZx3 ENCSR823ADL https://www.encodeproject.org/experiments/ENCSR823ADL "transcription factor,recombinant protein" FLAG-RFXANK-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF709KRI https://www.encodeproject.org/files/ENCFF709KRI/@@download/ENCFF709KRI.bam ENCFF581GYI https://www.encodeproject.org/files/ENCFF581GYI/@@download/ENCFF581GYI.bam 29.9 M 0 25.8 M 0.862 SE 76 76 native 0.0 M 23.2 M 21.3 M 0.711 0.93 0.93 14.22 90 1.05 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4b05f39-4604-4def-93c6-baafb75d3127/@@download/cross_correlation_plot/ENCFF895HBS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB695ZQY richard-myers:SL154033 ENCFF895HBS HiSeq 2000 2016-09-01T17:40:48.986316+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJz8036922jKJP1QkzY19 ENCSR823ADL https://www.encodeproject.org/experiments/ENCSR823ADL "transcription factor,recombinant protein" FLAG-RFXANK-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF617NGF https://www.encodeproject.org/files/ENCFF617NGF/@@download/ENCFF617NGF.bam ENCFF569GDP https://www.encodeproject.org/files/ENCFF569GDP/@@download/ENCFF569GDP.bam 28.6 M 0 24.2 M 0.845 SE 76 76 native 0.0 M 21.5 M 20.4 M 0.715 0.95 0.96 23.66 90 1.05 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/299aaeda-7334-4144-9120-fe69f45a90ff/@@download/cross_correlation_plot/ENCFF958ONK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB835RDE richard-myers:SL157916 ENCFF958ONK HiSeq 2000 2016-09-01T17:41:10.321809+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VK28036972Pf879Qbv0xq ENCSR560SEP https://www.encodeproject.org/experiments/ENCSR560SEP "transcription factor,recombinant protein" FLAG-RXRB-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF728BHH https://www.encodeproject.org/files/ENCFF728BHH/@@download/ENCFF728BHH.bam ENCFF885CDH https://www.encodeproject.org/files/ENCFF885CDH/@@download/ENCFF885CDH.bam 29.5 M 0 25.7 M 0.871 SE 76 76 native 0.0 M 23.0 M 21.8 M 0.738 0.95 0.95 19.90 110 1.12 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ecb7fda-08ca-4a38-a9cf-c5f07237fe76/@@download/cross_correlation_plot/ENCFF174QLC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB705GRO richard-myers:SL151588 ENCFF174QLC HiSeq 2000 2016-09-01T17:39:29.431562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VZ300369FZ7JXp832p8Jf ENCSR560SEP https://www.encodeproject.org/experiments/ENCSR560SEP "transcription factor,recombinant protein" FLAG-RXRB-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF267MKV https://www.encodeproject.org/files/ENCFF267MKV/@@download/ENCFF267MKV.bam ENCFF406PEZ https://www.encodeproject.org/files/ENCFF406PEZ/@@download/ENCFF406PEZ.bam 52.5 M 0 45.4 M 0.865 SE 76 76 native 0.0 M 41.0 M 37.2 M 0.710 0.92 0.92 12.61 115 1.15 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9b1db2f-50e8-49da-b706-30207fbebb86/@@download/cross_correlation_plot/ENCFF256YDZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB370AZU richard-myers:SL151589 ENCFF256YDZ HiSeq 2000 2016-09-01T17:34:58.476567+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VZ580369Gv3z1jv33Vzv4 ENCSR959OMS https://www.encodeproject.org/experiments/ENCSR959OMS "transcription factor,recombinant protein" FLAG-SAP130-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF515TAU https://www.encodeproject.org/files/ENCFF515TAU/@@download/ENCFF515TAU.bam ENCFF177GEH https://www.encodeproject.org/files/ENCFF177GEH/@@download/ENCFF177GEH.bam 31.4 M 0 26.1 M 0.829 SE 76 76 native 0.0 M 23.7 M 21.8 M 0.694 0.92 0.93 15.73 110 1.68 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/596f7421-5b69-4fc7-bc96-0b69b962d6da/@@download/cross_correlation_plot/ENCFF268REE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB751ZCQ richard-myers:SL143430 ENCFF268REE HiSeq 2000 2016-10-26T16:27:44.252585+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zvxQ0369FFbbzvx9jvv9q ENCSR959OMS https://www.encodeproject.org/experiments/ENCSR959OMS "transcription factor,recombinant protein" FLAG-SAP130-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF340WWW https://www.encodeproject.org/files/ENCFF340WWW/@@download/ENCFF340WWW.bam ENCFF647QVM https://www.encodeproject.org/files/ENCFF647QVM/@@download/ENCFF647QVM.bam 26.1 M 0 23.2 M 0.887 SE 76 76 native 0.0 M 21.2 M 19.6 M 0.751 0.93 0.93 15.73 115 1.40 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/c37cefd9-2bf1-4e2a-b49d-2087245c9d46/@@download/cross_correlation_plot/ENCFF482RBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB426ZKQ richard-myers:SL143431 ENCFF482RBF HiSeq 2000 2016-09-01T17:39:45.746880+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zx28036923pJJqk9xzYBJ ENCSR654ORQ https://www.encodeproject.org/experiments/ENCSR654ORQ "transcription factor,recombinant protein" FLAG-SLC30A9-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF690HCF https://www.encodeproject.org/files/ENCFF690HCF/@@download/ENCFF690HCF.bam ENCFF459ELG https://www.encodeproject.org/files/ENCFF459ELG/@@download/ENCFF459ELG.bam 25.6 M 0 22.9 M 0.895 SE 76 76 native 0.0 M 20.6 M 18.8 M 0.736 0.95 0.95 18.69 90 1.04 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/defa685c-ad58-4363-9f4c-0a206935dd8c/@@download/cross_correlation_plot/ENCFF698KPI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB182TIC richard-myers:SL143412 ENCFF698KPI HiSeq 2000 2016-09-01T17:41:12.206367+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zy2j03695140QP5B2vf8F ENCSR654ORQ https://www.encodeproject.org/experiments/ENCSR654ORQ "transcription factor,recombinant protein" FLAG-SLC30A9-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF601XNO https://www.encodeproject.org/files/ENCFF601XNO/@@download/ENCFF601XNO.bam ENCFF785RZQ https://www.encodeproject.org/files/ENCFF785RZQ/@@download/ENCFF785RZQ.bam 25.8 M 0 22.8 M 0.883 SE 76 76 native 0.0 M 20.5 M 19.4 M 0.751 0.96 0.96 25.41 95 1.04 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/121002fc-ce63-4f26-ae00-d08a7bba7c06/@@download/cross_correlation_plot/ENCFF088SMS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB737QEO richard-myers:SL143413 ENCFF088SMS HiSeq 2000 2016-09-01T17:39:33.453033+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zy680369BqVfYq19ZB8K8 ENCSR826YMT https://www.encodeproject.org/experiments/ENCSR826YMT "transcription factor,recombinant protein" FLAG-SMAD4_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF448PRG https://www.encodeproject.org/files/ENCFF448PRG/@@download/ENCFF448PRG.bam ENCFF618MTC https://www.encodeproject.org/files/ENCFF618MTC/@@download/ENCFF618MTC.bam 46.1 M 0 40.9 M 0.888 SE 76 76 native 0.0 M 36.1 M 34.1 M 0.739 0.95 0.95 24.42 110 1.27 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/04f09171-7820-475e-8132-3f43d6242f27/@@download/cross_correlation_plot/ENCFF633XUQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB426JDA richard-myers:SL161288 ENCFF633XUQ HiSeq 2000 2016-11-07T22:16:41.942918+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqQVQ03693q233YJ9xyvFb ENCSR826YMT https://www.encodeproject.org/experiments/ENCSR826YMT "transcription factor,recombinant protein" FLAG-SMAD4_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF428YKP https://www.encodeproject.org/files/ENCFF428YKP/@@download/ENCFF428YKP.bam ENCFF652KLI https://www.encodeproject.org/files/ENCFF652KLI/@@download/ENCFF652KLI.bam 42.5 M 0 37.4 M 0.879 SE 76 76 native 0.0 M 33.0 M 31.7 M 0.745 0.96 0.97 30.16 115 1.15 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/e915790c-ad6f-4768-a609-47fb87f3dc9f/@@download/cross_correlation_plot/ENCFF438SXQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB823IUF richard-myers:SL161289 ENCFF438SXQ HiSeq 2000 2016-11-07T22:17:09.696570+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqQgj03697K75bFk9xJv4Q ENCSR715UCI https://www.encodeproject.org/experiments/ENCSR715UCI "transcription factor,recombinant protein" FLAG-SOX13_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF818NIT https://www.encodeproject.org/files/ENCFF818NIT/@@download/ENCFF818NIT.bam ENCFF608KUT https://www.encodeproject.org/files/ENCFF608KUT/@@download/ENCFF608KUT.bam 44.9 M 0 39.5 M 0.880 SE 76 76 native 0.0 M 34.8 M 33.0 M 0.736 0.95 0.95 23.11 125 1.17 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/38026003-b3ee-401d-a1d2-98698a5fddb0/@@download/cross_correlation_plot/ENCFF892EKB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB849PTC richard-myers:SL161284 ENCFF892EKB HiSeq 2000 2016-11-07T22:15:27.781739+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqVX80369PJxfVGQp32gPY ENCSR715UCI https://www.encodeproject.org/experiments/ENCSR715UCI "transcription factor,recombinant protein" FLAG-SOX13_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF699CPF https://www.encodeproject.org/files/ENCFF699CPF/@@download/ENCFF699CPF.bam ENCFF175WMD https://www.encodeproject.org/files/ENCFF175WMD/@@download/ENCFF175WMD.bam 37.2 M 0 30.9 M 0.830 SE 76 76 native 0.0 M 27.4 M 25.2 M 0.677 0.93 0.94 18.62 125 1.64 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c4b4b95-bb92-44b5-9fb2-2124e23edbaf/@@download/cross_correlation_plot/ENCFF336VLV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB805WKO richard-myers:SL161344 ENCFF336VLV HiSeq 2000 2016-11-07T22:15:35.782646+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqVf00369448Z3JGpJkg2z ENCSR961WLZ https://www.encodeproject.org/experiments/ENCSR961WLZ "transcription factor,recombinant protein" FLAG-SOX5-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF392ZYL https://www.encodeproject.org/files/ENCFF392ZYL/@@download/ENCFF392ZYL.bam ENCFF809TPQ https://www.encodeproject.org/files/ENCFF809TPQ/@@download/ENCFF809TPQ.bam 42.7 M 0 37.0 M 0.866 SE 76 76 native 0.0 M 33.4 M 30.3 M 0.710 0.92 0.92 13.14 135 1.29 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4f92164-9d5d-45b9-9f3f-b0859b7f3422/@@download/cross_correlation_plot/ENCFF887ZSW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB322KTI richard-myers:SL151590 ENCFF887ZSW HiSeq 2000 2016-09-01T17:42:03.793409+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VGpQ0369K2Qy8BxQbP2gg ENCSR961WLZ https://www.encodeproject.org/experiments/ENCSR961WLZ "transcription factor,recombinant protein" FLAG-SOX5-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF425DTQ https://www.encodeproject.org/files/ENCFF425DTQ/@@download/ENCFF425DTQ.bam ENCFF568LZN https://www.encodeproject.org/files/ENCFF568LZN/@@download/ENCFF568LZN.bam 33.7 M 0 29.5 M 0.874 SE 76 76 native 0.0 M 26.4 M 24.7 M 0.732 0.94 0.94 16.77 120 1.08 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/4abeee5d-6100-4470-9519-f7b1924544ca/@@download/cross_correlation_plot/ENCFF674UHN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB338FNZ richard-myers:SL153373 ENCFF674UHN HiSeq 2000 2016-09-01T17:41:18.206328+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VGxQ03698gB8K9bQggXxp ENCSR019NPF https://www.encodeproject.org/experiments/ENCSR019NPF "transcription factor,recombinant protein" FLAG-SP5-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF884YQM https://www.encodeproject.org/files/ENCFF884YQM/@@download/ENCFF884YQM.bam ENCFF512JVS https://www.encodeproject.org/files/ENCFF512JVS/@@download/ENCFF512JVS.bam 33.4 M 0 28.5 M 0.852 SE 76 76 native 0.0 M 25.5 M 24.2 M 0.724 0.95 0.95 21.83 115 1.13 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/a8ad33b8-d7b4-451a-847f-8f7a971df981/@@download/cross_correlation_plot/ENCFF731JAM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB139REO richard-myers:SL154027 ENCFF731JAM HiSeq 2000 2016-09-01T17:40:10.814903+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VVkQ0369Gv3z1jv33Vzk2 ENCSR019NPF https://www.encodeproject.org/experiments/ENCSR019NPF "transcription factor,recombinant protein" FLAG-SP5-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF340NFD https://www.encodeproject.org/files/ENCFF340NFD/@@download/ENCFF340NFD.bam ENCFF330ZRD https://www.encodeproject.org/files/ENCFF330ZRD/@@download/ENCFF330ZRD.bam 29.3 M 0 24.3 M 0.829 SE 76 76 native 0.0 M 21.0 M 20.3 M 0.692 0.97 0.97 29.80 105 1.07 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d48475b-0d1f-4d6f-84cf-dc64b34a1d9c/@@download/cross_correlation_plot/ENCFF249QKO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB842IXB richard-myers:SL154028 ENCFF249QKO HiSeq 2000 2016-09-01T17:39:45.067179+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VVv8036934xfjxv37VJ6P ENCSR571PDN https://www.encodeproject.org/experiments/ENCSR571PDN "transcription factor,recombinant protein" FLAG-SSRP1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF474NTR https://www.encodeproject.org/files/ENCFF474NTR/@@download/ENCFF474NTR.bam ENCFF102BER https://www.encodeproject.org/files/ENCFF102BER/@@download/ENCFF102BER.bam 46.8 M 0 45.7 M 0.976 SE 50 50 native 0.0 M 37.8 M 37.0 M 0.789 0.98 0.98 58.78 85 1.04 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/82b76bc0-9e6b-4316-9f38-0e056dea8bfe/@@download/cross_correlation_plot/ENCFF925BQC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB710ZBC richard-myers:SL136349 ENCFF925BQC HiSeq 2000 2016-10-09T17:02:03.741594+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Q500jv1g5yGjfvVx0PBK ENCSR571PDN https://www.encodeproject.org/experiments/ENCSR571PDN "transcription factor,recombinant protein" FLAG-SSRP1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF746BQO https://www.encodeproject.org/files/ENCFF746BQO/@@download/ENCFF746BQO.bam ENCFF851YBK https://www.encodeproject.org/files/ENCFF851YBK/@@download/ENCFF851YBK.bam 39.1 M 0 38.3 M 0.978 SE 50 50 native 0.0 M 32.1 M 31.2 M 0.796 0.98 0.98 44.80 90 1.07 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d182004-3c67-4eb6-99bf-c1f4ea447fb7/@@download/cross_correlation_plot/ENCFF568WKI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB371NNS richard-myers:SL136350 ENCFF568WKI HiSeq 2000 2016-10-09T17:02:11.418260+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Q6Q0jv1vY92b0GYjVG5b ENCSR497JLX https://www.encodeproject.org/experiments/ENCSR497JLX "transcription factor,recombinant protein" FLAG-TEAD1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF211PNG https://www.encodeproject.org/files/ENCFF211PNG/@@download/ENCFF211PNG.bam ENCFF452YXR https://www.encodeproject.org/files/ENCFF452YXR/@@download/ENCFF452YXR.bam 30.9 M 0 27.6 M 0.893 SE 76 76 native 0.0 M 24.9 M 23.9 M 0.773 0.96 0.97 29.33 120 1.11 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecf09430-14ac-4293-b49e-176a981e7818/@@download/cross_correlation_plot/ENCFF703VJZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB726VOB richard-myers:SL149119 ENCFF703VJZ HiSeq 2000 2016-09-01T17:43:10.909975+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VB1803698gB8K9bQggXjg ENCSR497JLX https://www.encodeproject.org/experiments/ENCSR497JLX "transcription factor,recombinant protein" FLAG-TEAD1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF869KFS https://www.encodeproject.org/files/ENCFF869KFS/@@download/ENCFF869KFS.bam ENCFF308LVZ https://www.encodeproject.org/files/ENCFF308LVZ/@@download/ENCFF308LVZ.bam 35.0 M 0 30.7 M 0.878 SE 76 76 native 0.0 M 27.6 M 26.4 M 0.755 0.96 0.96 27.73 120 1.16 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d5e55bc-3075-4b6e-b103-e0707d42c7b0/@@download/cross_correlation_plot/ENCFF974TAR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB784EBU richard-myers:SL149120 ENCFF974TAR HiSeq 2000 2016-09-01T17:44:06.932263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VB3Q036972Pf879Qbv0gY ENCSR666QNP https://www.encodeproject.org/experiments/ENCSR666QNP "transcription factor,recombinant protein" FLAG-TEAD3-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF501SZR https://www.encodeproject.org/files/ENCFF501SZR/@@download/ENCFF501SZR.bam ENCFF891KWV https://www.encodeproject.org/files/ENCFF891KWV/@@download/ENCFF891KWV.bam 125.1 M 0 114.1 M 0.912 SE 76 76 native 0.0 M 102.0 M 94.0 M 0.752 0.93 0.93 16.07 105 1.10 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca0947c2-1a51-439a-a2c4-a9ce8922c036/@@download/cross_correlation_plot/ENCFF770VIU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB353UTG richard-myers:SL151948 ENCFF770VIU HiSeq 2000 2016-09-01T17:45:12.878081+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VKz00369PF1G9JJQXfYqP ENCSR666QNP https://www.encodeproject.org/experiments/ENCSR666QNP "transcription factor,recombinant protein" FLAG-TEAD3-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF572QQB https://www.encodeproject.org/files/ENCFF572QQB/@@download/ENCFF572QQB.bam ENCFF549OTD https://www.encodeproject.org/files/ENCFF549OTD/@@download/ENCFF549OTD.bam 36.4 M 0 31.2 M 0.855 SE 76 76 native 0.0 M 27.8 M 26.6 M 0.729 0.96 0.96 24.45 105 1.09 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/c2516085-917e-442d-8a54-a2ef0deb0a54/@@download/cross_correlation_plot/ENCFF192BLY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB205CFU richard-myers:SL154038 ENCFF192BLY HiSeq 2000 2016-09-01T17:41:03.694208+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VP1Q036922jKJP1QkzY2v ENCSR558OMR https://www.encodeproject.org/experiments/ENCSR558OMR "transcription factor,recombinant protein" FLAG-TFDP1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF067ZUU https://www.encodeproject.org/files/ENCFF067ZUU/@@download/ENCFF067ZUU.bam ENCFF102KED https://www.encodeproject.org/files/ENCFF102KED/@@download/ENCFF102KED.bam 59.0 M 0 49.2 M 0.834 SE 76 76 native 0.0 M 42.5 M 40.4 M 0.685 0.95 0.96 25.06 100 1.11 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/f33b4946-1ba1-485f-8e70-3e40f74b8b48/@@download/cross_correlation_plot/ENCFF260ZRQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB565GGK richard-myers:SL154029 ENCFF260ZRQ HiSeq 2000 2016-09-01T17:42:04.858298+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQKj036972Pf879Qbv11g ENCSR558OMR https://www.encodeproject.org/experiments/ENCSR558OMR "transcription factor,recombinant protein" FLAG-TFDP1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF661DJE https://www.encodeproject.org/files/ENCFF661DJE/@@download/ENCFF661DJE.bam ENCFF330UGJ https://www.encodeproject.org/files/ENCFF330UGJ/@@download/ENCFF330UGJ.bam 34.1 M 0 28.0 M 0.823 SE 76 76 native 0.0 M 24.3 M 23.5 M 0.689 0.97 0.97 31.52 235 1.02 0.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/745840d0-1b98-464b-9d9e-9a4155fb851c/@@download/cross_correlation_plot/ENCFF718NVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB495FEQ richard-myers:SL154030 ENCFF718NVN HiSeq 2000 2016-09-01T17:41:08.795788+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQV00369FZ7JXp832p879 ENCSR589SNT https://www.encodeproject.org/experiments/ENCSR589SNT "transcription factor,recombinant protein" FLAG-TFE3-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF900SVA https://www.encodeproject.org/files/ENCFF900SVA/@@download/ENCFF900SVA.bam ENCFF559OAK https://www.encodeproject.org/files/ENCFF559OAK/@@download/ENCFF559OAK.bam 39.9 M 0 34.6 M 0.866 SE 76 76 native 0.0 M 31.0 M 28.8 M 0.722 0.94 0.94 15.87 110 1.07 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a7a91cf-15b3-4c4b-b699-71234f1d0cc7/@@download/cross_correlation_plot/ENCFF851FHG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB128ZXN richard-myers:SL151583 ENCFF851FHG HiSeq 2000 2016-09-01T17:43:50.131106+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V9P803698gB8K9bQggXgy ENCSR589SNT https://www.encodeproject.org/experiments/ENCSR589SNT "transcription factor,recombinant protein" FLAG-TFE3-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF819ZGP https://www.encodeproject.org/files/ENCFF819ZGP/@@download/ENCFF819ZGP.bam ENCFF558CTF https://www.encodeproject.org/files/ENCFF558CTF/@@download/ENCFF558CTF.bam 38.6 M 0 33.1 M 0.855 SE 76 76 native 0.0 M 29.6 M 27.5 M 0.712 0.93 0.93 15.01 100 1.07 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/47dc1d78-7142-40f0-9823-f4550e9e7749/@@download/cross_correlation_plot/ENCFF085MHP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB751EES richard-myers:SL153370 ENCFF085MHP HiSeq 2000 2016-09-01T17:43:39.645818+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V9Vj03692XGGzG5Qz2Z16 ENCSR993LMB https://www.encodeproject.org/experiments/ENCSR993LMB "transcription factor,recombinant protein" FLAG-TGIF2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF479GFZ https://www.encodeproject.org/files/ENCFF479GFZ/@@download/ENCFF479GFZ.bam ENCFF037LPX https://www.encodeproject.org/files/ENCFF037LPX/@@download/ENCFF037LPX.bam 37.8 M 0 36.7 M 0.970 SE 50 50 native 0.0 M 30.2 M 29.3 M 0.773 0.97 0.97 40.08 80 1.05 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/56884cfb-7ea8-48e8-88eb-e76dcc09433c/@@download/cross_correlation_plot/ENCFF968PBN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB438OUO richard-myers:SL136351 ENCFF968PBN HiSeq 2000 2016-10-09T17:32:48.928954+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kx00jv1fvz446Zf2J5kJ ENCSR993LMB https://www.encodeproject.org/experiments/ENCSR993LMB "transcription factor,recombinant protein" FLAG-TGIF2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF810AAT https://www.encodeproject.org/files/ENCFF810AAT/@@download/ENCFF810AAT.bam ENCFF601ADC https://www.encodeproject.org/files/ENCFF601ADC/@@download/ENCFF601ADC.bam 42.4 M 0 41.1 M 0.969 SE 50 50 native 0.0 M 33.8 M 32.9 M 0.775 0.98 0.98 43.73 80 1.07 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/815c62fe-0917-4d3c-8136-1842ffa55d39/@@download/cross_correlation_plot/ENCFF490CEX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB430OCV richard-myers:SL136352 ENCFF490CEX HiSeq 2000 2016-10-09T17:32:48.005908+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5kz80jv1f6Kg8jbGjKZF0 ENCSR562POI https://www.encodeproject.org/experiments/ENCSR562POI "transcription factor,recombinant protein" FLAG-THAP11-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF523VQN https://www.encodeproject.org/files/ENCFF523VQN/@@download/ENCFF523VQN.bam ENCFF026KAS https://www.encodeproject.org/files/ENCFF026KAS/@@download/ENCFF026KAS.bam 39.6 M 0 33.2 M 0.838 SE 76 76 native 0.0 M 30.0 M 23.8 M 0.600 0.80 0.91 13.56 140 1.61 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/657d5767-2a9b-4c7e-b9c5-3779472a3d30/@@download/cross_correlation_plot/ENCFF371NAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB745QGM richard-myers:SL151601 ENCFF371NAN HiSeq 2000 2016-09-01T17:43:56.858161+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V9Z80369BXjkJ7GzvFq23 ENCSR562POI https://www.encodeproject.org/experiments/ENCSR562POI "transcription factor,recombinant protein" FLAG-THAP11-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF404YMM https://www.encodeproject.org/files/ENCFF404YMM/@@download/ENCFF404YMM.bam ENCFF465UWH https://www.encodeproject.org/files/ENCFF465UWH/@@download/ENCFF465UWH.bam 45.6 M 0 38.3 M 0.839 SE 76 76 native 0.0 M 34.2 M 27.4 M 0.602 0.81 0.92 16.17 125 1.47 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/0cc656b5-63ff-4161-85d9-84cc5deb92d0/@@download/cross_correlation_plot/ENCFF345EHR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB935ZSY richard-myers:SL151602 ENCFF345EHR HiSeq 2000 2016-09-01T17:44:03.660653+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V9fQ036972Pf879Qbv0g4 ENCSR430JGJ https://www.encodeproject.org/experiments/ENCSR430JGJ "transcription factor,recombinant protein" FLAG-THRB-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF626RYW https://www.encodeproject.org/files/ENCFF626RYW/@@download/ENCFF626RYW.bam ENCFF093LZD https://www.encodeproject.org/files/ENCFF093LZD/@@download/ENCFF093LZD.bam 39.7 M 0 34.6 M 0.870 SE 76 76 native 0.0 M 30.3 M 29.0 M 0.729 0.96 0.96 23.59 95 1.03 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae64b3a9-0839-4cf0-9625-fb31340f3fd7/@@download/cross_correlation_plot/ENCFF675YZO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB052RBU richard-myers:SL155089 ENCFF675YZO HiSeq 2000 2016-09-01T17:41:03.295537+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPB0036972Pf879Qbv0zp ENCSR430JGJ https://www.encodeproject.org/experiments/ENCSR430JGJ "transcription factor,recombinant protein" FLAG-THRB-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF793TUM https://www.encodeproject.org/files/ENCFF793TUM/@@download/ENCFF793TUM.bam ENCFF238HYZ https://www.encodeproject.org/files/ENCFF238HYZ/@@download/ENCFF238HYZ.bam 40.0 M 0 36.2 M 0.905 SE 76 76 native 0.0 M 32.8 M 29.9 M 0.746 0.92 0.92 12.41 150 1.08 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6af7d77-ea19-43c3-a53c-bbbce230547a/@@download/cross_correlation_plot/ENCFF805RHK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB775DWV richard-myers:SL155090 ENCFF805RHK HiSeq 2000 2016-09-01T17:40:59.873018+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VPJ00369PF1G9JJQXfYvB ENCSR184SVO https://www.encodeproject.org/experiments/ENCSR184SVO "transcription factor,recombinant protein" FLAG-ZBTB26-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF578RKV https://www.encodeproject.org/files/ENCFF578RKV/@@download/ENCFF578RKV.bam ENCFF304OJT https://www.encodeproject.org/files/ENCFF304OJT/@@download/ENCFF304OJT.bam 41.2 M 0 37.9 M 0.920 SE 76 76 native 0.0 M 33.3 M 32.0 M 0.778 0.96 0.96 28.13 100 1.07 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/8dfc6b8e-3a33-4322-b303-ab30239d3d72/@@download/cross_correlation_plot/ENCFF649ROJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB915ZSE richard-myers:SL151946 ENCFF649ROJ HiSeq 2000 2016-09-01T17:42:34.314021+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VF780369B5KbZ6VQxzg16 ENCSR184SVO https://www.encodeproject.org/experiments/ENCSR184SVO "transcription factor,recombinant protein" FLAG-ZBTB26-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF327HGF https://www.encodeproject.org/files/ENCFF327HGF/@@download/ENCFF327HGF.bam ENCFF721QQA https://www.encodeproject.org/files/ENCFF721QQA/@@download/ENCFF721QQA.bam 33.8 M 0 30.4 M 0.900 SE 76 76 native 0.0 M 27.2 M 25.6 M 0.757 0.95 0.95 20.95 120 1.12 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/931c962e-f022-4501-95f8-8831cf4838b4/@@download/cross_correlation_plot/ENCFF928MCL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB199HUQ richard-myers:SL151947 ENCFF928MCL HiSeq 2000 2016-09-01T17:41:56.477562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VFB8036972Pf879Qbv0k1 ENCSR586DEH https://www.encodeproject.org/experiments/ENCSR586DEH "transcription factor,recombinant protein" FLAG-ZFP1_isoform1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF077LTT https://www.encodeproject.org/files/ENCFF077LTT/@@download/ENCFF077LTT.bam ENCFF966PFR https://www.encodeproject.org/files/ENCFF966PFR/@@download/ENCFF966PFR.bam 30.1 M 0 25.1 M 0.833 SE 76 76 native 0.0 M 22.1 M 21.1 M 0.700 0.95 0.95 21.39 110 1.05 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/51536137-6c6d-484a-9e67-6c49691263b2/@@download/cross_correlation_plot/ENCFF868BZO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB455NSX richard-myers:SL154020 ENCFF868BZO HiSeq 2000 2016-10-26T16:27:18.081277+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F080120036923z1QYVBPkppv ENCSR586DEH https://www.encodeproject.org/experiments/ENCSR586DEH "transcription factor,recombinant protein" FLAG-ZFP1_isoform1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF513QRO https://www.encodeproject.org/files/ENCFF513QRO/@@download/ENCFF513QRO.bam ENCFF192YVA https://www.encodeproject.org/files/ENCFF192YVA/@@download/ENCFF192YVA.bam 30.3 M 0 26.1 M 0.863 SE 76 76 native 0.0 M 23.4 M 21.7 M 0.716 0.94 0.94 17.29 90 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/f8346a29-c720-400a-9931-cdaa033e3508/@@download/cross_correlation_plot/ENCFF962UNX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB653TSQ richard-myers:SL157893 ENCFF962UNX HiSeq 2000 2016-09-01T17:41:12.282625+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08016803694q32PPxBJ66zv ENCSR487CPI https://www.encodeproject.org/experiments/ENCSR487CPI "transcription factor,recombinant protein" FLAG-ZFP64-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF221NHN https://www.encodeproject.org/files/ENCFF221NHN/@@download/ENCFF221NHN.bam ENCFF093BRP https://www.encodeproject.org/files/ENCFF093BRP/@@download/ENCFF093BRP.bam 41.3 M 0 35.9 M 0.869 SE 76 76 native 0.0 M 31.3 M 30.0 M 0.727 0.96 0.97 29.87 100 1.05 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d3508965-bcf1-4836-a1d4-881e1b09c9ab/@@download/cross_correlation_plot/ENCFF493APP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB859TJE richard-myers:SL159314 ENCFF493APP HiSeq 2000 2016-11-07T22:16:34.439181+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqPfj03693q233YJ9xyvF2 ENCSR487CPI https://www.encodeproject.org/experiments/ENCSR487CPI "transcription factor,recombinant protein" FLAG-ZFP64-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF438WBW https://www.encodeproject.org/files/ENCFF438WBW/@@download/ENCFF438WBW.bam ENCFF055WET https://www.encodeproject.org/files/ENCFF055WET/@@download/ENCFF055WET.bam 42.7 M 0 38.9 M 0.912 SE 76 76 native 0.0 M 34.2 M 32.9 M 0.772 0.96 0.97 30.91 105 1.05 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/18bb5a70-b569-4f8d-af22-4cfd4a016069/@@download/cross_correlation_plot/ENCFF213TBR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB775OIW richard-myers:SL159315 ENCFF213TBR HiSeq 2000 2016-11-07T22:16:02.884975+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqPpQ0369JzJYQX59XB42k ENCSR704IGU https://www.encodeproject.org/experiments/ENCSR704IGU "transcription factor,recombinant protein" FLAG-ZGPAT-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF428OAR https://www.encodeproject.org/files/ENCFF428OAR/@@download/ENCFF428OAR.bam ENCFF230NIW https://www.encodeproject.org/files/ENCFF230NIW/@@download/ENCFF230NIW.bam 67.3 M 0 55.6 M 0.826 SE 76 76 native 0.0 M 46.7 M 38.8 M 0.577 0.85 0.85 6.62 165 1.09 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/4aa271a5-df62-4654-95f9-570412710446/@@download/cross_correlation_plot/ENCFF379UBY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB074WSE richard-myers:SL153366 ENCFF379UBY HiSeq 2000 2016-09-01T17:42:46.405597+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJV0036972Pf879Qbv0x6 ENCSR704IGU https://www.encodeproject.org/experiments/ENCSR704IGU "transcription factor,recombinant protein" FLAG-ZGPAT-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF103BEQ https://www.encodeproject.org/files/ENCFF103BEQ/@@download/ENCFF103BEQ.bam ENCFF342MDN https://www.encodeproject.org/files/ENCFF342MDN/@@download/ENCFF342MDN.bam 46.0 M 0 41.4 M 0.900 SE 76 76 native 0.0 M 37.3 M 31.9 M 0.693 0.88 0.88 8.13 130 1.05 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7850baa-5110-4d50-9f69-d38bdb019a8c/@@download/cross_correlation_plot/ENCFF885OGQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB602AVI richard-myers:SL153367 ENCFF885OGQ HiSeq 2000 2016-09-01T17:41:27.599360+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJZ00369K2Qy8BxQbP2jj ENCSR808FFI https://www.encodeproject.org/experiments/ENCSR808FFI "transcription factor,recombinant protein" FLAG-ZKSCAN8-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF126WTF https://www.encodeproject.org/files/ENCFF126WTF/@@download/ENCFF126WTF.bam ENCFF931HDB https://www.encodeproject.org/files/ENCFF931HDB/@@download/ENCFF931HDB.bam 34.7 M 0 31.0 M 0.895 SE 76 76 native 0.0 M 28.0 M 26.1 M 0.753 0.94 0.94 17.31 125 1.07 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca11d6a6-3217-4edc-9c0e-f2c50b23a05a/@@download/cross_correlation_plot/ENCFF824RXN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB802MHQ richard-myers:SL157918 ENCFF824RXN HiSeq 2000 2016-09-01T17:44:44.225508+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V6v80369PF1G9JJQXfY7b ENCSR808FFI https://www.encodeproject.org/experiments/ENCSR808FFI "transcription factor,recombinant protein" FLAG-ZKSCAN8-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF250XOF https://www.encodeproject.org/files/ENCFF250XOF/@@download/ENCFF250XOF.bam ENCFF971QHE https://www.encodeproject.org/files/ENCFF971QHE/@@download/ENCFF971QHE.bam 30.1 M 0 27.1 M 0.902 SE 76 76 native 0.0 M 23.8 M 22.8 M 0.757 0.96 0.96 22.84 110 1.04 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/92a41da7-e074-4fc0-a42a-0f5ffb85da04/@@download/cross_correlation_plot/ENCFF006ALN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB884ZRD richard-myers:SL157902 ENCFF006ALN HiSeq 2000 2016-09-01T17:44:56.365562+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V6yj03692XGGzG5Qz2YxQ ENCSR182QWU https://www.encodeproject.org/experiments/ENCSR182QWU "transcription factor,recombinant protein" FLAG-ZNF3-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF127FFH https://www.encodeproject.org/files/ENCFF127FFH/@@download/ENCFF127FFH.bam ENCFF603CIW https://www.encodeproject.org/files/ENCFF603CIW/@@download/ENCFF603CIW.bam 24.8 M 0 24.3 M 0.980 SE 50 50 native 0.0 M 20.4 M 19.6 M 0.792 0.97 0.97 33.45 85 1.03 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/d4e72184-0d5f-43c6-ac8c-6823c276c53b/@@download/cross_correlation_plot/ENCFF656IHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB791GPL richard-myers:SL124744 ENCFF656IHM HiSeq 2000 2016-10-26T16:26:42.312547+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zz6803698F1qV3kBFq2fq ENCSR182QWU https://www.encodeproject.org/experiments/ENCSR182QWU "transcription factor,recombinant protein" FLAG-ZNF3-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF581GQK https://www.encodeproject.org/files/ENCFF581GQK/@@download/ENCFF581GQK.bam ENCFF728SLT https://www.encodeproject.org/files/ENCFF728SLT/@@download/ENCFF728SLT.bam 33.2 M 0 32.3 M 0.974 SE 50 50 native 0.0 M 27.0 M 25.9 M 0.779 0.96 0.96 28.28 90 1.04 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff0a7651-a81b-4d20-b688-7c9f34d7b8ce/@@download/cross_correlation_plot/ENCFF296DPR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB749VQV richard-myers:SL124745 ENCFF296DPR HiSeq 2000 2016-10-26T16:27:00.376551+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzB00369BqVfYq19ZB8P0 ENCSR415AEB https://www.encodeproject.org/experiments/ENCSR415AEB "transcription factor,recombinant protein" FLAG-ZNF48-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF250ZEU https://www.encodeproject.org/files/ENCFF250ZEU/@@download/ENCFF250ZEU.bam ENCFF634VRX https://www.encodeproject.org/files/ENCFF634VRX/@@download/ENCFF634VRX.bam 44.0 M 0 40.4 M 0.918 SE 76 76 native 0.0 M 35.4 M 33.7 M 0.765 0.95 0.95 21.47 110 1.06 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/85b2bfc8-1b91-4dc4-92d5-e86c97454a30/@@download/cross_correlation_plot/ENCFF521IXY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB071OSF richard-myers:SL158262 ENCFF521IXY HiSeq 2000 2016-11-07T22:11:08.236757+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqVpQ0369PJxfVGQp32gQB ENCSR415AEB https://www.encodeproject.org/experiments/ENCSR415AEB "transcription factor,recombinant protein" FLAG-ZNF48-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF789XWO https://www.encodeproject.org/files/ENCFF789XWO/@@download/ENCFF789XWO.bam ENCFF741KLN https://www.encodeproject.org/files/ENCFF741KLN/@@download/ENCFF741KLN.bam 35.2 M 0 28.9 M 0.820 SE 76 76 native 0.0 M 24.1 M 22.3 M 0.632 0.93 0.93 14.12 150 1.31 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d3e3ee2-b28e-42a1-9d77-0c11107d55d3/@@download/cross_correlation_plot/ENCFF287ADI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB622FSH richard-myers:SL158263 ENCFF287ADI HiSeq 2000 2016-11-07T22:10:15.435678+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqX180369Fx2yP98pBgJ17 ENCSR372JXR https://www.encodeproject.org/experiments/ENCSR372JXR "transcription factor,recombinant protein" FLAG-ZNF511-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF736DHC https://www.encodeproject.org/files/ENCFF736DHC/@@download/ENCFF736DHC.bam ENCFF961TAB https://www.encodeproject.org/files/ENCFF961TAB/@@download/ENCFF961TAB.bam 51.4 M 0 45.8 M 0.893 SE 76 76 native 0.0 M 41.2 M 38.3 M 0.746 0.94 0.94 16.63 160 1.03 0.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f4c29d9-ae75-4250-9fe8-28b61045235a/@@download/cross_correlation_plot/ENCFF259MWS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB159SHW richard-myers:SL149232 ENCFF259MWS HiSeq 2000 2016-09-01T17:43:08.355866+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VFxj0369PF1G9JJQXfYfk ENCSR372JXR https://www.encodeproject.org/experiments/ENCSR372JXR "transcription factor,recombinant protein" FLAG-ZNF511-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF927VOZ https://www.encodeproject.org/files/ENCFF927VOZ/@@download/ENCFF927VOZ.bam ENCFF734TON https://www.encodeproject.org/files/ENCFF734TON/@@download/ENCFF734TON.bam 29.5 M 0 26.0 M 0.881 SE 76 76 native 0.0 M 23.3 M 22.2 M 0.750 0.96 0.96 24.21 100 1.04 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/666111c8-161d-476a-b2b6-12207dd5a9bb/@@download/cross_correlation_plot/ENCFF128OQA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB553PMF richard-myers:SL149233 ENCFF128OQA HiSeq 2000 2016-09-01T17:41:23.980460+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VG0Q0369BXjkJ7GzvFq5V ENCSR173CTF https://www.encodeproject.org/experiments/ENCSR173CTF "transcription factor,recombinant protein" FLAG-ZNF580-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF753MGD https://www.encodeproject.org/files/ENCFF753MGD/@@download/ENCFF753MGD.bam ENCFF794CFE https://www.encodeproject.org/files/ENCFF794CFE/@@download/ENCFF794CFE.bam 25.0 M 0 22.3 M 0.890 SE 76 76 native 0.0 M 19.7 M 18.8 M 0.752 0.97 0.97 29.21 95 1.05 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/58b6618a-39af-4a0c-a909-4404d80711dc/@@download/cross_correlation_plot/ENCFF720DMM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB311VYC richard-myers:SL151957 ENCFF720DMM HiSeq 2000 2016-09-01T17:41:04.351603+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJFj03692XGGzG5Qz2Z8f ENCSR173CTF https://www.encodeproject.org/experiments/ENCSR173CTF "transcription factor,recombinant protein" FLAG-ZNF580-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF531SFF https://www.encodeproject.org/files/ENCFF531SFF/@@download/ENCFF531SFF.bam ENCFF880CKR https://www.encodeproject.org/files/ENCFF880CKR/@@download/ENCFF880CKR.bam 38.2 M 0 34.2 M 0.894 SE 76 76 native 0.0 M 30.6 M 28.7 M 0.751 0.95 0.95 19.29 125 1.10 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/f825efd7-aed8-4e8b-b3dc-9b8da413975c/@@download/cross_correlation_plot/ENCFF099NTW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB777BWC richard-myers:SL151958 ENCFF099NTW HiSeq 2000 2016-09-01T17:41:23.816093+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VJK8036972Pf879Qbv0vx ENCSR578CXC https://www.encodeproject.org/experiments/ENCSR578CXC "transcription factor,recombinant protein" FLAG-ZNF644-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF060HQQ https://www.encodeproject.org/files/ENCFF060HQQ/@@download/ENCFF060HQQ.bam ENCFF971DVJ https://www.encodeproject.org/files/ENCFF971DVJ/@@download/ENCFF971DVJ.bam 27.4 M 0 22.9 M 0.836 SE 76 76 native 0.0 M 20.2 M 19.4 M 0.709 0.97 0.97 31.40 100 1.07 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/a73747a6-1c3e-4f9c-ab91-eac1e717137e/@@download/cross_correlation_plot/ENCFF095XXT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB749JUD richard-myers:SL143420 ENCFF095XXT HiSeq 2000 2016-10-26T16:26:50.209691+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zyFQ03699pQzk2JB6K7Ff ENCSR578CXC https://www.encodeproject.org/experiments/ENCSR578CXC "transcription factor,recombinant protein" FLAG-ZNF644-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF304FMS https://www.encodeproject.org/files/ENCFF304FMS/@@download/ENCFF304FMS.bam ENCFF641NDW https://www.encodeproject.org/files/ENCFF641NDW/@@download/ENCFF641NDW.bam 36.1 M 0 31.2 M 0.865 SE 76 76 native 0.0 M 27.5 M 26.3 M 0.730 0.96 0.96 27.59 105 1.07 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e808aaf-7ea9-4ada-9886-7a57b8c8f5c8/@@download/cross_correlation_plot/ENCFF272TAW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB505EAS richard-myers:SL143421 ENCFF272TAW HiSeq 2000 2016-10-26T16:27:32.012998+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zyQ80369KPb3j15B4p866 ENCSR502GAX https://www.encodeproject.org/experiments/ENCSR502GAX "transcription factor,recombinant protein" FLAG-ZNF652-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF047TEL https://www.encodeproject.org/files/ENCFF047TEL/@@download/ENCFF047TEL.bam ENCFF203MXG https://www.encodeproject.org/files/ENCFF203MXG/@@download/ENCFF203MXG.bam 27.2 M 0 23.6 M 0.866 SE 76 76 native 0.0 M 21.3 M 20.0 M 0.734 0.95 0.96 27.20 130 1.27 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/91912315-bf78-4369-8050-74c48617b20f/@@download/cross_correlation_plot/ENCFF061MRR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB615NIO richard-myers:SL149103 ENCFF061MRR HiSeq 2000 2016-09-01T17:43:27.738299+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V8xj03692XGGzG5Qz2Z06 ENCSR502GAX https://www.encodeproject.org/experiments/ENCSR502GAX "transcription factor,recombinant protein" FLAG-ZNF652-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF901MSA https://www.encodeproject.org/files/ENCFF901MSA/@@download/ENCFF901MSA.bam ENCFF740CQC https://www.encodeproject.org/files/ENCFF740CQC/@@download/ENCFF740CQC.bam 33.6 M 0 28.8 M 0.856 SE 76 76 native 0.0 M 25.3 M 24.5 M 0.729 0.97 0.97 37.08 110 1.07 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/50057779-517c-4b06-a02b-d65158d93d83/@@download/cross_correlation_plot/ENCFF372LTI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB520HOO richard-myers:SL149104 ENCFF372LTI HiSeq 2000 2016-09-01T17:43:56.205555+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V92j036972Pf879Qbv0f5 ENCSR553QMC https://www.encodeproject.org/experiments/ENCSR553QMC "transcription factor,recombinant protein" FLAG-ZNF7_isoform2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF453XVL https://www.encodeproject.org/files/ENCFF453XVL/@@download/ENCFF453XVL.bam ENCFF859RGN https://www.encodeproject.org/files/ENCFF859RGN/@@download/ENCFF859RGN.bam 67.0 M 0 59.3 M 0.885 SE 76 76 native 0.0 M 52.0 M 49.9 M 0.744 0.96 0.96 26.65 110 1.02 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd32b64b-56a9-4946-a40e-797d19b0270d/@@download/cross_correlation_plot/ENCFF079AGT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB611TXK richard-myers:SL159327 ENCFF079AGT HiSeq 2000 2016-11-07T22:17:21.759061+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqPz003691xB7BKV9zVyBZ ENCSR553QMC https://www.encodeproject.org/experiments/ENCSR553QMC "transcription factor,recombinant protein" FLAG-ZNF7_isoform2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF372XYO https://www.encodeproject.org/files/ENCFF372XYO/@@download/ENCFF372XYO.bam ENCFF987STE https://www.encodeproject.org/files/ENCFF987STE/@@download/ENCFF987STE.bam 41.8 M 0 35.8 M 0.856 SE 76 76 native 0.0 M 30.7 M 29.5 M 0.706 0.96 0.96 28.63 90 1.05 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/04d6823f-2b70-4f1b-a47c-5b3a6a40a380/@@download/cross_correlation_plot/ENCFF753ADO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB370XEL richard-myers:SL160915 ENCFF753ADO HiSeq 2000 2016-11-07T22:16:14.691675+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JqQ300369JzJYQX59XB434 ENCSR396SOH https://www.encodeproject.org/experiments/ENCSR396SOH "transcription factor,recombinant protein" FLAG-ZNF792-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF783EIO https://www.encodeproject.org/files/ENCFF783EIO/@@download/ENCFF783EIO.bam ENCFF196MHW https://www.encodeproject.org/files/ENCFF196MHW/@@download/ENCFF196MHW.bam 48.3 M 0 40.4 M 0.835 SE 76 76 native 0.0 M 35.8 M 33.9 M 0.701 0.95 0.95 20.79 105 1.04 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/17a27881-f3d5-4731-ad47-b47edab81a73/@@download/cross_correlation_plot/ENCFF414QOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB774RLR richard-myers:SL147697 ENCFF414QOO HiSeq 2000 2016-10-26T16:28:39.307642+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zyb003695YX1xgJBKFB9P ENCSR396SOH https://www.encodeproject.org/experiments/ENCSR396SOH "transcription factor,recombinant protein" FLAG-ZNF792-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF852ZPS https://www.encodeproject.org/files/ENCFF852ZPS/@@download/ENCFF852ZPS.bam ENCFF674GBH https://www.encodeproject.org/files/ENCFF674GBH/@@download/ENCFF674GBH.bam 47.1 M 0 38.4 M 0.815 SE 76 76 native 0.0 M 33.9 M 32.5 M 0.691 0.96 0.97 28.95 90 1.05 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/388ed911-e756-4e1b-b467-b1cd92d44fd9/@@download/cross_correlation_plot/ENCFF503DWZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB371QHD richard-myers:SL147698 ENCFF503DWZ HiSeq 2000 2016-10-26T16:28:13.156859+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zyk803697KPkyX9BPPpX5 ENCSR712FAM https://www.encodeproject.org/experiments/ENCSR712FAM "transcription factor,recombinant protein" FLAG-ZSCAN9-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF894JTR https://www.encodeproject.org/files/ENCFF894JTR/@@download/ENCFF894JTR.bam ENCFF005GGK https://www.encodeproject.org/files/ENCFF005GGK/@@download/ENCFF005GGK.bam 46.1 M 0 39.2 M 0.850 SE 76 76 native 0.0 M 35.0 M 32.2 M 0.697 0.93 0.93 13.39 95 1.04 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/9c43dfed-ba89-46d8-9824-dc5824b0697d/@@download/cross_correlation_plot/ENCFF772XOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB630VJC richard-myers:SL151577 ENCFF772XOL HiSeq 2000 2016-09-01T17:41:19.248426+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQ9003692XGGzG5Qz2ZGg ENCSR712FAM https://www.encodeproject.org/experiments/ENCSR712FAM "transcription factor,recombinant protein" FLAG-ZSCAN9-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF088RTW https://www.encodeproject.org/files/ENCFF088RTW/@@download/ENCFF088RTW.bam ENCFF175ENQ https://www.encodeproject.org/files/ENCFF175ENQ/@@download/ENCFF175ENQ.bam 31.1 M 0 27.1 M 0.870 SE 76 76 native 0.0 M 24.4 M 23.0 M 0.739 0.95 0.96 22.30 100 1.07 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/8f8f51f6-b76d-4520-8b75-4791a08200c6/@@download/cross_correlation_plot/ENCFF257FGF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB675CWO richard-myers:SL149234 ENCFF257FGF HiSeq 2000 2016-09-01T17:41:01.243840+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQFj03692XGGzG5Qz2ZJ2 ENCSR000BHP https://www.encodeproject.org/experiments/ENCSR000BHP transcription factor FOSL2-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF185DVY https://www.encodeproject.org/files/ENCFF185DVY/@@download/ENCFF185DVY.bam ENCFF080OMA https://www.encodeproject.org/files/ENCFF080OMA/@@download/ENCFF080OMA.bam 60.8 M 0 37.7 M 0.619 SE 36 36 native 0.0 M 26.4 M 23.7 M 0.390 0.90 0.91 12.24 110 1.42 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/73ec16f6-6305-4d65-bb61-49ae97ad86b8/@@download/cross_correlation_plot/ENCFF000PIE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLB richard-myers:SL632 ENCFF000PIE Illumina Genome Analyzer IIx 2016-12-11T04:25:02.252154+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1656QQ03692yykb1zBpz7v3 ENCSR000BHP https://www.encodeproject.org/experiments/ENCSR000BHP transcription factor FOSL2-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF953PCA https://www.encodeproject.org/files/ENCFF953PCA/@@download/ENCFF953PCA.bam ENCFF239IWS https://www.encodeproject.org/files/ENCFF239IWS/@@download/ENCFF239IWS.bam 21.1 M 0 17.9 M 0.845 SE 36 36 native 0.0 M 12.8 M 12.1 M 0.570 0.95 0.95 19.82 145 1.26 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/c88f3ffe-6db3-4cdc-bef1-01b0be3a9ac8/@@download/cross_correlation_plot/ENCFF000PHU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLC richard-myers:SL1107 ENCFF000PHU Illumina Genome Analyzer IIx 2016-12-11T04:05:42.677554+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1656b00369PvYp91zK1PxQ0 ENCSR000BLE https://www.encodeproject.org/experiments/ENCSR000BLE transcription factor FOXA1-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF563UBP https://www.encodeproject.org/files/ENCFF563UBP/@@download/ENCFF563UBP.bam ENCFF567DDU https://www.encodeproject.org/files/ENCFF567DDU/@@download/ENCFF567DDU.bam 31.2 M 0 28.7 M 0.918 SE 36 36 native 0.0 M 23.1 M 18.4 M 0.588 0.80 0.82 5.96 140 2.38 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/1fcb93a8-dd92-40d6-bb6f-465724ff4fd0/@@download/cross_correlation_plot/ENCFF000PIJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZT richard-myers:SL1786 ENCFF000PIJ Illumina Genome Analyzer IIx 2016-12-11T04:27:17.383329+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165XV803692yykb1zBpz7y9 ENCSR000BLE https://www.encodeproject.org/experiments/ENCSR000BLE transcription factor FOXA1-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF172IMH https://www.encodeproject.org/files/ENCFF172IMH/@@download/ENCFF172IMH.bam ENCFF952XAL https://www.encodeproject.org/files/ENCFF952XAL/@@download/ENCFF952XAL.bam 27.0 M 0 21.5 M 0.795 SE 36 36 native 0.0 M 16.4 M 13.0 M 0.480 0.79 0.80 4.81 130 2.16 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/e454c7a3-2e63-4a67-833e-186a873f8161/@@download/cross_correlation_plot/ENCFF000PIM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYK richard-myers:SL2124 ENCFF000PIM Illumina Genome Analyzer IIx 2016-12-11T04:23:58.931438+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165XZ00369GF0YB1zjPf709 ENCSR000BMO https://www.encodeproject.org/experiments/ENCSR000BMO transcription factor FOXA1-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF401YVR https://www.encodeproject.org/files/ENCFF401YVR/@@download/ENCFF401YVR.bam ENCFF247XZI https://www.encodeproject.org/files/ENCFF247XZI/@@download/ENCFF247XZI.bam 25.0 M 0 22.7 M 0.908 SE 36 36 native 0.0 M 17.9 M 15.2 M 0.610 0.85 0.86 7.18 145 1.91 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/9790ffc3-9b03-4dfb-805a-3770b007c5b4/@@download/cross_correlation_plot/ENCFF000PIB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRB richard-myers:SL1788 ENCFF000PIB Illumina Genome Analyzer IIx 2016-12-11T04:09:33.715679+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165FqQ0369KbxV61z4GFvZp ENCSR000BMO https://www.encodeproject.org/experiments/ENCSR000BMO transcription factor FOXA1-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF332SRJ https://www.encodeproject.org/files/ENCFF332SRJ/@@download/ENCFF332SRJ.bam ENCFF782PBE https://www.encodeproject.org/files/ENCFF782PBE/@@download/ENCFF782PBE.bam 14.0 M 0 12.8 M 0.914 SE 36 36 native 0.0 M 9.8 M 9.0 M 0.646 0.92 0.93 14.70 140 2.82 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/eb6d841e-f52d-4022-9b0f-f9a2b78e28fc/@@download/cross_correlation_plot/ENCFF000PHY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVM richard-myers:SL2194 ENCFF000PHY Illumina Genome Analyzer IIx 2016-12-11T04:07:06.515343+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165G0j0369PvYp91zK1PxX4 ENCSR000BNI https://www.encodeproject.org/experiments/ENCSR000BNI transcription factor FOXA2-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF576IPP https://www.encodeproject.org/files/ENCFF576IPP/@@download/ENCFF576IPP.bam ENCFF753YDG https://www.encodeproject.org/files/ENCFF753YDG/@@download/ENCFF753YDG.bam 46.6 M 0 20.7 M 0.444 SE 36 36 native 0.0 M 15.7 M 6.7 M 0.143 0.42 0.42 1.82 225 1.21 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b9e92da-f2b0-4c3e-a4fe-7a30b4d95de6/@@download/cross_correlation_plot/ENCFF000PIT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYT richard-myers:SL2196 ENCFF000PIT Illumina Genome Analyzer IIx 2016-12-11T03:42:33.833151+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164fPj03697yz601ypVJ3K3 ENCSR000BNI https://www.encodeproject.org/experiments/ENCSR000BNI transcription factor FOXA2-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF933ITF https://www.encodeproject.org/files/ENCFF933ITF/@@download/ENCFF933ITF.bam ENCFF078CHP https://www.encodeproject.org/files/ENCFF078CHP/@@download/ENCFF078CHP.bam 47.3 M 0 40.7 M 0.860 SE 36 36 native 0.0 M 31.0 M 27.3 M 0.578 0.88 0.92 17.59 95 1.85 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9cc7d68-947a-4853-9ae5-a039980b18a3/@@download/cross_correlation_plot/ENCFF000PIX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYR richard-myers:SL3175 ENCFF000PIX Illumina Genome Analyzer IIx 2016-12-11T03:58:00.065134+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164fZQ03695F8Bk64ff073Z ENCSR000BJK https://www.encodeproject.org/experiments/ENCSR000BJK transcription factor GABPA-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF496HGU https://www.encodeproject.org/files/ENCFF496HGU/@@download/ENCFF496HGU.bam ENCFF806BHF https://www.encodeproject.org/files/ENCFF806BHF/@@download/ENCFF806BHF.bam 63.5 M 0 32.5 M 0.511 SE 36 36 native 0.0 M 18.4 M 14.9 M 0.235 0.82 0.93 23.59 95 2.14 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/1dbc5b6d-ab32-4773-b0e8-3aed80dd62bc/@@download/cross_correlation_plot/ENCFF000PJF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWT richard-myers:SL275 ENCFF000PJF Illumina Genome Analyzer IIx 2016-12-11T03:34:00.152103+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164B50036969X0jJ6p3ffqv ENCSR000BJK https://www.encodeproject.org/experiments/ENCSR000BJK transcription factor GABPA-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF070WEO https://www.encodeproject.org/files/ENCFF070WEO/@@download/ENCFF070WEO.bam ENCFF707FTP https://www.encodeproject.org/files/ENCFF707FTP/@@download/ENCFF707FTP.bam 36.3 M 0 20.4 M 0.562 SE 36 36 native 0.0 M 12.1 M 10.3 M 0.284 0.86 0.94 23.03 90 2.49 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/87979633-e201-4d3a-a87d-4fefbb98bbfb/@@download/cross_correlation_plot/ENCFF000PJC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCV richard-myers:SL276 ENCFF000PJC Illumina Genome Analyzer IIx 2016-12-11T03:07:30.857149+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164BB0036969X0jJ6p3ffv6 ENCSR590CNM https://www.encodeproject.org/experiments/ENCSR590CNM transcription factor GATA4-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF171MMW https://www.encodeproject.org/files/ENCFF171MMW/@@download/ENCFF171MMW.bam ENCFF940PJL https://www.encodeproject.org/files/ENCFF940PJL/@@download/ENCFF940PJL.bam 30.8 M 0 29.5 M 0.960 SE 50 50 native 0.0 M 23.9 M 22.6 M 0.736 0.95 0.95 21.60 120 1.08 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba9d4c75-8f10-4735-94d1-864ad2f61406/@@download/cross_correlation_plot/ENCFF163SRP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB153SRE richard-myers:SL61584 ENCFF163SRP HiSeq 2000 2016-10-09T17:01:39.414006+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41bQ0jv1vY92b0GYjVFkg ENCSR590CNM https://www.encodeproject.org/experiments/ENCSR590CNM transcription factor GATA4-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF580GYQ https://www.encodeproject.org/files/ENCFF580GYQ/@@download/ENCFF580GYQ.bam ENCFF877MJO https://www.encodeproject.org/files/ENCFF877MJO/@@download/ENCFF877MJO.bam 23.0 M 0 21.8 M 0.946 SE 50 50 native 0.0 M 17.5 M 17.1 M 0.744 0.98 0.98 52.61 75 1.04 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/220a899f-0abf-44d5-97e6-1d6ec7c19bd3/@@download/cross_correlation_plot/ENCFF193ROJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB752HJB richard-myers:SL65246 ENCFF193ROJ HiSeq 2000 2016-10-09T17:01:32.385797+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41fj0jv1zBYbxYJ5zzz6F ENCSR000BMC https://www.encodeproject.org/experiments/ENCSR000BMC "transcription factor,chromatin remodeller" HDAC2-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF030DWK https://www.encodeproject.org/files/ENCFF030DWK/@@download/ENCFF030DWK.bam ENCFF242RQW https://www.encodeproject.org/files/ENCFF242RQW/@@download/ENCFF242RQW.bam 40.6 M 0 35.6 M 0.877 SE 36 36 native 0.0 M 27.2 M 20.2 M 0.498 0.75 0.73 3.55 110 1.21 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/072c4851-a452-4f48-a59d-dbb7944d6241/@@download/cross_correlation_plot/ENCFF000PJJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJZ richard-myers:SL3177 ENCFF000PJJ Illumina Genome Analyzer IIx 2016-12-11T03:42:45.349682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164b6j03695zJkyP3F892Qb ENCSR000BMC https://www.encodeproject.org/experiments/ENCSR000BMC "transcription factor,chromatin remodeller" HDAC2-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF188GPG https://www.encodeproject.org/files/ENCFF188GPG/@@download/ENCFF188GPG.bam ENCFF940PJP https://www.encodeproject.org/files/ENCFF940PJP/@@download/ENCFF940PJP.bam 29.2 M 0 26.4 M 0.904 SE 36 36 native 0.0 M 20.5 M 13.1 M 0.449 0.65 0.62 2.36 110 1.16 2.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/6098003f-ad70-4efd-aa3e-e42f1845741a/@@download/cross_correlation_plot/ENCFF000PJD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNN richard-myers:SL3583 ENCFF000PJD Illumina Genome Analyzer IIx 2016-12-11T03:33:52.884054+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164bFQ03692f1gp513PxgPj ENCSR800QIT https://www.encodeproject.org/experiments/ENCSR800QIT transcription factor HNF1A-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF871ONC https://www.encodeproject.org/files/ENCFF871ONC/@@download/ENCFF871ONC.bam ENCFF252RRA https://www.encodeproject.org/files/ENCFF252RRA/@@download/ENCFF252RRA.bam 26.3 M 0 24.5 M 0.933 SE 50 50 native 0.0 M 19.8 M 19.0 M 0.722 0.96 0.96 28.62 120 1.13 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9076872-eeb5-4a3c-af76-9dcad1fa7827/@@download/cross_correlation_plot/ENCFF442RQA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB489XYO richard-myers:SL61371 ENCFF442RQA HiSeq 2000 2016-09-01T17:40:13.231541+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQg003690KKGFqZ31BQK1 ENCSR800QIT https://www.encodeproject.org/experiments/ENCSR800QIT transcription factor HNF1A-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF370ZNH https://www.encodeproject.org/files/ENCFF370ZNH/@@download/ENCFF370ZNH.bam ENCFF692WPN https://www.encodeproject.org/files/ENCFF692WPN/@@download/ENCFF692WPN.bam 33.7 M 0 32.5 M 0.962 SE 50 50 native 0.0 M 26.7 M 25.3 M 0.749 0.95 0.95 21.86 135 1.06 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/1677bcf8-5655-4987-81d8-d03cac665e12/@@download/cross_correlation_plot/ENCFF194UYN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB040AHP richard-myers:SL81097 ENCFF194UYN HiSeq 2000 2016-09-01T17:40:35.554862+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQpj0369FZ7JXp832p889 ENCSR000BLF https://www.encodeproject.org/experiments/ENCSR000BLF transcription factor HNF4A-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF305JRI https://www.encodeproject.org/files/ENCFF305JRI/@@download/ENCFF305JRI.bam ENCFF392NEF https://www.encodeproject.org/files/ENCFF392NEF/@@download/ENCFF392NEF.bam 15.4 M 0 11.4 M 0.742 SE 36 36 native 0.0 M 9.0 M 5.7 M 0.369 0.64 0.61 2.28 120 2.61 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/42388ec9-8eb5-4e68-869d-936df6b26f55/@@download/cross_correlation_plot/ENCFF000PJT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWF richard-myers:SL1481 ENCFF000PJT Illumina Genome Analyzer IIx 2016-12-11T04:10:42.163266+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165YgQ03699Z3Y8493qbq4J ENCSR000BLF https://www.encodeproject.org/experiments/ENCSR000BLF transcription factor HNF4A-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF578NKF https://www.encodeproject.org/files/ENCFF578NKF/@@download/ENCFF578NKF.bam ENCFF048IWW https://www.encodeproject.org/files/ENCFF048IWW/@@download/ENCFF048IWW.bam 27.8 M 0 11.5 M 0.414 SE 36 36 native 0.0 M 8.9 M 6.2 M 0.222 0.70 0.68 2.88 120 2.11 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/022a71ce-ebb1-4412-b323-0bd1d0e9a429/@@download/cross_correlation_plot/ENCFF000PJX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWG richard-myers:SL2125 ENCFF000PJX Illumina Genome Analyzer IIx 2016-12-11T04:17:33.402349+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Yx803692yykb1zBpz7yj ENCSR000BNJ https://www.encodeproject.org/experiments/ENCSR000BNJ transcription factor HNF4G-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF960YUK https://www.encodeproject.org/files/ENCFF960YUK/@@download/ENCFF960YUK.bam ENCFF003EYJ https://www.encodeproject.org/files/ENCFF003EYJ/@@download/ENCFF003EYJ.bam 35.5 M 0 33.3 M 0.938 SE 36 36 native 0.0 M 25.2 M 23.5 M 0.662 0.94 0.94 15.65 110 1.18 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd8ea522-43cb-4783-b26e-0c6fc6c4bd03/@@download/cross_correlation_plot/ENCFF000PKH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCP richard-myers:SL3178 ENCFF000PKH Illumina Genome Analyzer IIx 2016-12-11T02:34:36.430452+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163k28036933PVVJ7Qq01Jz ENCSR000BNJ https://www.encodeproject.org/experiments/ENCSR000BNJ transcription factor HNF4G-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF444CNM https://www.encodeproject.org/files/ENCFF444CNM/@@download/ENCFF444CNM.bam ENCFF830YVW https://www.encodeproject.org/files/ENCFF830YVW/@@download/ENCFF830YVW.bam 31.8 M 0 28.8 M 0.904 SE 36 36 native 0.0 M 21.4 M 16.2 M 0.509 0.76 0.75 3.69 155 1.08 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/8b884794-0651-4daf-bfd3-c4641cb5c42d/@@download/cross_correlation_plot/ENCFF000PKJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDJ richard-myers:SL3463 ENCFF000PKJ Illumina Genome Analyzer IIx 2016-12-11T02:27:21.026024+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163k7003699Z3Y8493qbpyF ENCSR000BGK https://www.encodeproject.org/experiments/ENCSR000BGK transcription factor JUND-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF521KDX https://www.encodeproject.org/files/ENCFF521KDX/@@download/ENCFF521KDX.bam ENCFF943YUP https://www.encodeproject.org/files/ENCFF943YUP/@@download/ENCFF943YUP.bam 24.3 M 0 16.6 M 0.684 SE 36 36 native 0.0 M 11.6 M 11.2 M 0.462 0.97 0.97 33.58 90 1.33 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/b39246fc-089d-4a81-9c27-dcc82f2a7244/@@download/cross_correlation_plot/ENCFF000PKK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBI richard-myers:SL635 ENCFF000PKK Illumina Genome Analyzer IIx 2016-12-10T23:44:46.310935+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Y380369BgG8x1ygv1X1x ENCSR000BGK https://www.encodeproject.org/experiments/ENCSR000BGK transcription factor JUND-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF318WWT https://www.encodeproject.org/files/ENCFF318WWT/@@download/ENCFF318WWT.bam ENCFF232TLZ https://www.encodeproject.org/files/ENCFF232TLZ/@@download/ENCFF232TLZ.bam 41.7 M 0 31.0 M 0.742 SE 36 36 native 0.0 M 21.8 M 20.1 M 0.481 0.92 0.93 13.52 105 1.25 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c680cff-29dc-425d-9c83-e8a42c99580d/@@download/cross_correlation_plot/ENCFF000PKR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZK richard-myers:SL629 ENCFF000PKR Illumina Genome Analyzer IIx 2016-12-11T01:11:31.245703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Y8003695F8Bk64ff0726 ENCSR000BTM https://www.encodeproject.org/experiments/ENCSR000BTM transcription factor MAX-human HepG2 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BQW https://www.encodeproject.org/experiments/ENCSR000BQW transcription factor MBD4-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF759IRG https://www.encodeproject.org/files/ENCFF759IRG/@@download/ENCFF759IRG.bam ENCFF750OMU https://www.encodeproject.org/files/ENCFF750OMU/@@download/ENCFF750OMU.bam 39.5 M 0 34.8 M 0.882 SE 36 36 native 0.0 M 26.3 M 24.6 M 0.624 0.96 0.96 25.18 120 1.05 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/449bd318-a67e-41ad-ac30-b0d6c1087e7b/@@download/cross_correlation_plot/ENCFF000PLF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDO richard-myers:SL7901 ENCFF000PLF Illumina Genome Analyzer IIx 2016-12-11T04:10:11.248480+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16556Q0369KQ3Yk1yz1kgf9 ENCSR000BQW https://www.encodeproject.org/experiments/ENCSR000BQW transcription factor MBD4-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF549KFG https://www.encodeproject.org/files/ENCFF549KFG/@@download/ENCFF549KFG.bam ENCFF347BOD https://www.encodeproject.org/files/ENCFF347BOD/@@download/ENCFF347BOD.bam 49.1 M 0 42.9 M 0.874 SE 36 36 native 0.0 M 32.2 M 31.3 M 0.637 0.98 0.98 49.76 100 1.03 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/52c9ecfa-bba0-4a54-a415-6280c381a3d5/@@download/cross_correlation_plot/ENCFF000PLH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDN richard-myers:SL8132 ENCFF000PLH Illumina Genome Analyzer IIx 2016-12-11T04:14:38.244027+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1655FQ03697k5jKB6pJ7qy1 ENCSR000BRO https://www.encodeproject.org/experiments/ENCSR000BRO transcription factor MYBL2-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF200PFF https://www.encodeproject.org/files/ENCFF200PFF/@@download/ENCFF200PFF.bam ENCFF391GPC https://www.encodeproject.org/files/ENCFF391GPC/@@download/ENCFF391GPC.bam 42.8 M 0 38.0 M 0.887 SE 36 36 native 0.0 M 29.0 M 27.7 M 0.648 0.97 0.97 34.80 115 1.07 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/84fb3187-b538-48a0-a90c-e2eb819481e2/@@download/cross_correlation_plot/ENCFF000PLP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHQ richard-myers:SL7101 ENCFF000PLP Illumina Genome Analyzer IIx 2016-12-11T04:54:00.677909+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165y5Q03697k5jKB6pJ7v0z ENCSR000BRO https://www.encodeproject.org/experiments/ENCSR000BRO transcription factor MYBL2-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF056WAK https://www.encodeproject.org/files/ENCFF056WAK/@@download/ENCFF056WAK.bam ENCFF110UFM https://www.encodeproject.org/files/ENCFF110UFM/@@download/ENCFF110UFM.bam 37.2 M 0 32.1 M 0.863 SE 36 36 native 0.0 M 24.3 M 21.7 M 0.583 0.92 0.92 12.51 155 1.10 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/745a5b1e-e922-48bf-8c35-e6532def4f36/@@download/cross_correlation_plot/ENCFF000PLM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHR richard-myers:SL7564 ENCFF000PLM Illumina Genome Analyzer IIx 2016-12-11T04:51:12.656374+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165yB803690xXYVJ7Fj2f8Z ENCSR000BQX https://www.encodeproject.org/experiments/ENCSR000BQX transcription factor NFIC-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF016SOS https://www.encodeproject.org/files/ENCFF016SOS/@@download/ENCFF016SOS.bam ENCFF769MOD https://www.encodeproject.org/files/ENCFF769MOD/@@download/ENCFF769MOD.bam 43.1 M 0 34.5 M 0.800 SE 36 36 native 0.0 M 25.1 M 24.0 M 0.557 0.97 0.97 39.45 110 1.08 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/27528952-a340-4c59-9b09-1db7d520ca12/@@download/cross_correlation_plot/ENCFF000PLW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLK richard-myers:SL7102 ENCFF000PLW Illumina Genome Analyzer IIx 2016-12-10T22:23:42.659295+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1635Y803696z7JqGk4Yzy24 ENCSR000BQX https://www.encodeproject.org/experiments/ENCSR000BQX transcription factor NFIC-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF520BHR https://www.encodeproject.org/files/ENCFF520BHR/@@download/ENCFF520BHR.bam ENCFF526WGG https://www.encodeproject.org/files/ENCFF526WGG/@@download/ENCFF526WGG.bam 40.2 M 0 31.0 M 0.770 SE 36 36 native 0.0 M 23.9 M 20.0 M 0.496 0.87 0.87 7.45 160 1.13 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/6959fdce-1f3f-4721-8f38-ef84efb4440f/@@download/cross_correlation_plot/ENCFF000PMB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCM richard-myers:SL7554 ENCFF000PMB Illumina Genome Analyzer IIx 2016-12-10T22:06:57.779701+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1635j003697xKX68qyy2kB6 ENCSR000BVM https://www.encodeproject.org/experiments/ENCSR000BVM transcription factor NR2F2-human HepG2 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR518WPL https://www.encodeproject.org/experiments/ENCSR518WPL transcription factor NR2F6-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF273SBT https://www.encodeproject.org/files/ENCFF273SBT/@@download/ENCFF273SBT.bam ENCFF696BZK https://www.encodeproject.org/files/ENCFF696BZK/@@download/ENCFF696BZK.bam 33.3 M 0 30.9 M 0.930 SE 50 50 native 0.0 M 25.9 M 23.1 M 0.696 0.90 0.91 10.73 135 1.18 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/4eec434e-379a-4e60-9a81-2fedd0163d91/@@download/cross_correlation_plot/ENCFF108ORY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB881VQL richard-myers:SL75690 ENCFF108ORY HiSeq 2000 2016-10-09T17:00:17.989741+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Vf80jv1zBYbxYJ5zzzYY ENCSR518WPL https://www.encodeproject.org/experiments/ENCSR518WPL transcription factor NR2F6-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF140CDB https://www.encodeproject.org/files/ENCFF140CDB/@@download/ENCFF140CDB.bam ENCFF379PVS https://www.encodeproject.org/files/ENCFF379PVS/@@download/ENCFF379PVS.bam 36.4 M 0 34.9 M 0.958 SE 50 50 native 0.0 M 28.8 M 27.0 M 0.742 0.94 0.95 19.17 145 1.16 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/56a0b575-30d6-4741-851e-d7749e950e37/@@download/cross_correlation_plot/ENCFF780YNX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB400YSA richard-myers:SL81104 ENCFF780YNX HiSeq 2000 2016-10-09T17:00:30.809793+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4VgQ0jv1QxJBfj5Zb2q47 ENCSR853ADA https://www.encodeproject.org/experiments/ENCSR853ADA transcription factor NRF1-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF688NWX https://www.encodeproject.org/files/ENCFF688NWX/@@download/ENCFF688NWX.bam ENCFF131CXQ https://www.encodeproject.org/files/ENCFF131CXQ/@@download/ENCFF131CXQ.bam 21.9 M 0 18.6 M 0.846 SE 50 50 native 0.0 M 16.0 M 10.3 M 0.468 0.67 0.73 3.80 175 2.68 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/30fe7e5f-44b1-497b-9a21-2675ab37e6a1/@@download/cross_correlation_plot/ENCFF045UOH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB154AII richard-myers:SL77444 ENCFF045UOH HiSeq 2000 2016-10-09T17:05:25.231993+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5pYj0jv1YvGVzF100Zf69 ENCSR853ADA https://www.encodeproject.org/experiments/ENCSR853ADA transcription factor NRF1-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF332KBI https://www.encodeproject.org/files/ENCFF332KBI/@@download/ENCFF332KBI.bam ENCFF390ZCZ https://www.encodeproject.org/files/ENCFF390ZCZ/@@download/ENCFF390ZCZ.bam 38.9 M 0 31.9 M 0.820 SE 50 50 native 0.0 M 27.9 M 16.8 M 0.432 0.62 0.89 18.53 200 2.58 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/c48c81bf-7cb8-4fb8-b62d-5bf2e9665254/@@download/cross_correlation_plot/ENCFF468UEL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB122HQR richard-myers:SL127128 ENCFF468UEL HiSeq 2000 2016-10-09T17:05:24.361580+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5pbj0jv1YvGVzF100Zf6V ENCSR000BJM https://www.encodeproject.org/experiments/ENCSR000BJM transcription factor POLR2A-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF704XJN https://www.encodeproject.org/files/ENCFF704XJN/@@download/ENCFF704XJN.bam ENCFF555CHL https://www.encodeproject.org/files/ENCFF555CHL/@@download/ENCFF555CHL.bam 23.6 M 0 17.5 M 0.740 SE 36 36 native 0.0 M 12.4 M 9.0 M 0.381 0.74 0.70 2.57 90 2.71 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/01acd2a9-f0ba-4198-8d5e-0cd08b44cdf9/@@download/cross_correlation_plot/ENCFF000PNM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEB richard-myers:SL348 ENCFF000PNM Illumina Genome Analyzer IIx 2016-12-10T20:01:47.862839+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Y2Q0369GF0YB1zjPf6Jx ENCSR000BJM https://www.encodeproject.org/experiments/ENCSR000BJM transcription factor POLR2A-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF263PSR https://www.encodeproject.org/files/ENCFF263PSR/@@download/ENCFF263PSR.bam ENCFF739TSH https://www.encodeproject.org/files/ENCFF739TSH/@@download/ENCFF739TSH.bam 41.4 M 0 26.1 M 0.630 SE 36 36 native 0.0 M 17.7 M 15.6 M 0.378 0.88 0.91 12.47 90 1.94 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/70df5e63-425c-4af2-83d6-457f07292de4/@@download/cross_correlation_plot/ENCFF000PNT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEA richard-myers:SL349 ENCFF000PNT Illumina Genome Analyzer IIx 2016-12-10T20:32:22.040757+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Y7803698ZxQY8q63X7v6 ENCSR000BPI https://www.encodeproject.org/experiments/ENCSR000BPI "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF591PPT https://www.encodeproject.org/files/ENCFF591PPT/@@download/ENCFF591PPT.bam ENCFF254BKS https://www.encodeproject.org/files/ENCFF254BKS/@@download/ENCFF254BKS.bam 28.3 M 0 21.4 M 0.756 SE 36 36 native 0.0 M 15.9 M 15.1 M 0.533 0.95 0.96 29.67 110 1.53 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7cb5a98-8559-4aee-ac63-722134b9576e/@@download/cross_correlation_plot/ENCFF000PNI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEG richard-myers:SL1363 ENCFF000PNI Illumina Genome Analyzer IIx 2016-12-11T03:02:01.273362+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1647X8036969X0jJ6p3ffqB ENCSR000BPI https://www.encodeproject.org/experiments/ENCSR000BPI "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF684WXH https://www.encodeproject.org/files/ENCFF684WXH/@@download/ENCFF684WXH.bam ENCFF122YTI https://www.encodeproject.org/files/ENCFF122YTI/@@download/ENCFF122YTI.bam 43.8 M 0 39.8 M 0.908 SE 36 36 native 0.0 M 30.4 M 28.4 M 0.647 0.94 0.95 23.45 120 1.27 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/cf1f3f00-e970-4903-bf68-729c29fd6242/@@download/cross_correlation_plot/ENCFF000PNL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZP richard-myers:SL5604 ENCFF000PNL Illumina Genome Analyzer IIx 2016-12-11T03:14:30.121398+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1647g003697K4B1J71py00G ENCSR000BLS https://www.encodeproject.org/experiments/ENCSR000BLS transcription factor RAD21-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF185SAW https://www.encodeproject.org/files/ENCFF185SAW/@@download/ENCFF185SAW.bam ENCFF713OAW https://www.encodeproject.org/files/ENCFF713OAW/@@download/ENCFF713OAW.bam 34.0 M 0 30.2 M 0.888 SE 36 36 native 0.0 M 23.2 M 16.7 M 0.492 0.72 0.75 4.23 110 3.03 1.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/c468d43c-b631-4e3c-948a-f2bd53aa4581/@@download/cross_correlation_plot/ENCFF000PNW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JAQ richard-myers:SL3179 ENCFF000PNW Illumina Genome Analyzer IIx 2016-12-11T02:53:55.630516+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16422Q036904pZZ8v3bkg64 ENCSR000BLS https://www.encodeproject.org/experiments/ENCSR000BLS transcription factor RAD21-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF140VTG https://www.encodeproject.org/files/ENCFF140VTG/@@download/ENCFF140VTG.bam ENCFF918IEO https://www.encodeproject.org/files/ENCFF918IEO/@@download/ENCFF918IEO.bam 34.4 M 0 31.8 M 0.926 SE 36 36 native 0.0 M 25.2 M 19.2 M 0.558 0.76 0.77 4.40 130 2.06 2.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/7fbd4da1-cbcc-42c2-911f-803bd7bd9cf4/@@download/cross_correlation_plot/ENCFF000PNY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JAR richard-myers:SL3586 ENCFF000PNY Illumina Genome Analyzer IIx 2016-12-11T02:56:09.824461+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16427Q03697k5jKB6pJ7qq5 ENCSR000BJL https://www.encodeproject.org/experiments/ENCSR000BJL "transcription factor,chromatin remodeller" REST-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF291BBG https://www.encodeproject.org/files/ENCFF291BBG/@@download/ENCFF291BBG.bam ENCFF351TOY https://www.encodeproject.org/files/ENCFF351TOY/@@download/ENCFF351TOY.bam 47.1 M 0 23.5 M 0.498 SE 36 36 native 0.0 M 14.5 M 12.7 M 0.270 0.88 0.95 29.09 80 1.54 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb5833b8-704a-4b0e-bf4d-ed46c373ead6/@@download/cross_correlation_plot/ENCFF000PMK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGV richard-myers:SL273 ENCFF000PMK Illumina Genome Analyzer IIx 2016-12-10T18:57:58.474439+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Gj80369PvYp91zK1Px3v ENCSR000BJL https://www.encodeproject.org/experiments/ENCSR000BJL "transcription factor,chromatin remodeller" REST-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF195HUS https://www.encodeproject.org/files/ENCFF195HUS/@@download/ENCFF195HUS.bam ENCFF572UTS https://www.encodeproject.org/files/ENCFF572UTS/@@download/ENCFF572UTS.bam 46.6 M 0 20.2 M 0.433 SE 36 36 native 0.0 M 12.7 M 10.1 M 0.217 0.81 0.94 22.80 85 2.02 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/04a87af2-4af7-4dcd-b544-ff31fa00ed5e/@@download/cross_correlation_plot/ENCFF000PMN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGU richard-myers:SL274 ENCFF000PMN Illumina Genome Analyzer IIx 2016-12-10T18:38:12.497940+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Gx80369Bxb30J6x5bYzY ENCSR000BOT https://www.encodeproject.org/experiments/ENCSR000BOT "transcription factor,chromatin remodeller" REST-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF833ZLA https://www.encodeproject.org/files/ENCFF833ZLA/@@download/ENCFF833ZLA.bam ENCFF821FMV https://www.encodeproject.org/files/ENCFF821FMV/@@download/ENCFF821FMV.bam 37.7 M 0 33.0 M 0.875 SE 36 36 native 0.0 M 24.8 M 20.5 M 0.543 0.83 0.85 6.93 115 1.27 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/19a7c4ae-4f2f-4e16-b92b-7909c576f751/@@download/cross_correlation_plot/ENCFF000PMU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBU richard-myers:SL5040 ENCFF000PMU Illumina Genome Analyzer IIx 2016-12-11T02:24:45.822100+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163gG003698j1Pf95Q52xpx ENCSR000BOT https://www.encodeproject.org/experiments/ENCSR000BOT "transcription factor,chromatin remodeller" REST-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF701RBP https://www.encodeproject.org/files/ENCFF701RBP/@@download/ENCFF701RBP.bam ENCFF838HCN https://www.encodeproject.org/files/ENCFF838HCN/@@download/ENCFF838HCN.bam 37.7 M 0 31.3 M 0.829 SE 36 36 native 0.0 M 22.6 M 18.8 M 0.497 0.87 0.89 9.10 130 1.35 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e267e63-b9bf-4722-9b10-50baf1974cbc/@@download/cross_correlation_plot/ENCFF000PMV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBV richard-myers:SL5897 ENCFF000PMV Illumina Genome Analyzer IIx 2016-12-11T02:22:48.574479+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163gV803695Kj1j8qPQgkY1 ENCSR000BHU https://www.encodeproject.org/experiments/ENCSR000BHU transcription factor RXRA-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF333LDV https://www.encodeproject.org/files/ENCFF333LDV/@@download/ENCFF333LDV.bam ENCFF990BLX https://www.encodeproject.org/files/ENCFF990BLX/@@download/ENCFF990BLX.bam 33.3 M 0 17.9 M 0.537 SE 36 36 native 0.0 M 12.2 M 10.3 M 0.309 0.85 0.84 6.24 110 1.12 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/8c690632-257d-4d95-bad0-1ecbac9b5589/@@download/cross_correlation_plot/ENCFF000PPM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEY richard-myers:SL984 ENCFF000PPM Illumina Genome Analyzer IIx 2016-12-11T02:18:05.712751+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163jgj036993F1b953B4Q1p ENCSR000BHU https://www.encodeproject.org/experiments/ENCSR000BHU transcription factor RXRA-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF199GHD https://www.encodeproject.org/files/ENCFF199GHD/@@download/ENCFF199GHD.bam ENCFF892EXU https://www.encodeproject.org/files/ENCFF892EXU/@@download/ENCFF892EXU.bam 44.4 M 0 34.3 M 0.772 SE 36 36 native 0.0 M 25.0 M 22.6 M 0.509 0.94 0.94 17.83 110 1.31 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/0151b91c-326f-455f-8608-d1045433f558/@@download/cross_correlation_plot/ENCFF000PPQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYM richard-myers:SL1054 ENCFF000PPQ Illumina Genome Analyzer IIx 2016-12-11T02:42:42.510551+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163jv803697K4B1J71pxzq9 ENCSR000BGL https://www.encodeproject.org/experiments/ENCSR000BGL transcription factor SIN3A-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF281FRR https://www.encodeproject.org/files/ENCFF281FRR/@@download/ENCFF281FRR.bam ENCFF481VKV https://www.encodeproject.org/files/ENCFF481VKV/@@download/ENCFF481VKV.bam 27.8 M 0 17.9 M 0.642 SE 36 36 native 0.0 M 12.3 M 10.4 M 0.373 0.85 0.84 6.09 120 1.17 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5d349d2-38b8-4c3b-bc5d-d509e95fcbe4/@@download/cross_correlation_plot/ENCFF000PPW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSP richard-myers:SL583 ENCFF000PPW Illumina Genome Analyzer IIx 2016-12-10T22:13:06.068380+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163G5j0369Bxb30J6x5bZ5y ENCSR000BGL https://www.encodeproject.org/experiments/ENCSR000BGL transcription factor SIN3A-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF122ECM https://www.encodeproject.org/files/ENCFF122ECM/@@download/ENCFF122ECM.bam ENCFF053QKA https://www.encodeproject.org/files/ENCFF053QKA/@@download/ENCFF053QKA.bam 55.0 M 0 32.5 M 0.592 SE 36 36 native 0.0 M 22.3 M 20.4 M 0.371 0.92 0.92 12.06 75 1.22 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/a563945f-e40e-416b-9cb3-c0a3671e58e0/@@download/cross_correlation_plot/ENCFF000PQC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSO richard-myers:SL637 ENCFF000PQC Illumina Genome Analyzer IIx 2016-12-11T00:51:30.004725+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163GBQ03697K4B1J71pxzk2 ENCSR445ACU https://www.encodeproject.org/experiments/ENCSR445ACU transcription factor SOX13-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF010EFV https://www.encodeproject.org/files/ENCFF010EFV/@@download/ENCFF010EFV.bam ENCFF256BJV https://www.encodeproject.org/files/ENCFF256BJV/@@download/ENCFF256BJV.bam 27.4 M 0 25.6 M 0.936 SE 50 50 native 0.0 M 20.3 M 19.2 M 0.700 0.95 0.95 19.45 135 1.07 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/1da3b709-1ef9-4854-875b-c62141bd8024/@@download/cross_correlation_plot/ENCFF137GGC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB977SCN richard-myers:SL44321 ENCFF137GGC HiSeq 2000 2016-10-09T17:02:20.510732+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv65g00jv1YFyQ90J3z9yZy ENCSR445ACU https://www.encodeproject.org/experiments/ENCSR445ACU transcription factor SOX13-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF908SPX https://www.encodeproject.org/files/ENCFF908SPX/@@download/ENCFF908SPX.bam ENCFF546QWD https://www.encodeproject.org/files/ENCFF546QWD/@@download/ENCFF546QWD.bam 26.8 M 0 25.6 M 0.954 SE 50 50 native 0.0 M 20.8 M 20.4 M 0.759 0.98 0.98 53.53 110 1.07 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/06e59a0b-0857-47f7-a6ac-96d7181b88b3/@@download/cross_correlation_plot/ENCFF939TTG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB777XNT richard-myers:SL45967 ENCFF939TTG HiSeq 2000 2016-10-09T17:02:15.401613+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv65jj0jv1b6Q2yZ51Zb5XB ENCSR000BJX https://www.encodeproject.org/experiments/ENCSR000BJX transcription factor SP1-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF850TET https://www.encodeproject.org/files/ENCFF850TET/@@download/ENCFF850TET.bam ENCFF848KLH https://www.encodeproject.org/files/ENCFF848KLH/@@download/ENCFF848KLH.bam 50.3 M 0 38.7 M 0.768 SE 36 36 native 0.0 M 29.0 M 27.2 M 0.540 0.96 0.97 33.17 135 1.40 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c57bfc0-a907-4ac0-b9e4-6a0137c32a12/@@download/cross_correlation_plot/ENCFF000PQJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFG richard-myers:SL1056 ENCFF000PQJ Illumina Genome Analyzer IIx 2016-12-10T21:11:19.026260+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162jj0036993F1b953B4Pyg ENCSR000BJX https://www.encodeproject.org/experiments/ENCSR000BJX transcription factor SP1-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF449IUJ https://www.encodeproject.org/files/ENCFF449IUJ/@@download/ENCFF449IUJ.bam ENCFF919ZCW https://www.encodeproject.org/files/ENCFF919ZCW/@@download/ENCFF919ZCW.bam 20.6 M 0 17.7 M 0.857 SE 36 36 native 0.0 M 12.8 M 11.3 M 0.546 0.89 0.89 8.65 130 1.08 3.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/9fbf39bc-a9ef-413f-85ce-51d73749ba50/@@download/cross_correlation_plot/ENCFF000PQE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFH richard-myers:SL1194 ENCFF000PQE Illumina Genome Analyzer IIx 2016-12-10T20:38:56.510419+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162jx003693JQ1ZJ95zxG4z ENCSR000BOU https://www.encodeproject.org/experiments/ENCSR000BOU transcription factor SP2-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF499PEW https://www.encodeproject.org/files/ENCFF499PEW/@@download/ENCFF499PEW.bam ENCFF734LVN https://www.encodeproject.org/files/ENCFF734LVN/@@download/ENCFF734LVN.bam 44.3 M 0 37.4 M 0.845 SE 36 36 native 0.0 M 28.3 M 25.3 M 0.572 0.92 0.92 12.76 115 1.02 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/006bf1cf-bc1c-4cf5-b0b8-0caa06b4278f/@@download/cross_correlation_plot/ENCFF000PQL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZS richard-myers:SL5688 ENCFF000PQL Illumina Genome Analyzer IIx 2016-12-11T04:42:10.429098+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165gj003697xKX68qyy2kVP ENCSR000BOU https://www.encodeproject.org/experiments/ENCSR000BOU transcription factor SP2-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF249LHW https://www.encodeproject.org/files/ENCFF249LHW/@@download/ENCFF249LHW.bam ENCFF364KMZ https://www.encodeproject.org/files/ENCFF364KMZ/@@download/ENCFF364KMZ.bam 39.2 M 0 32.9 M 0.841 SE 36 36 native 0.0 M 25.0 M 22.7 M 0.579 0.92 0.92 12.77 125 1.05 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/d35177cf-3962-4bd8-93ca-061ee93248f4/@@download/cross_correlation_plot/ENCFF000PQP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZR richard-myers:SL6006 ENCFF000PQP Illumina Genome Analyzer IIx 2016-12-11T04:41:14.641697+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165gvj03692yykb1zBpz7zg ENCSR000BLV https://www.encodeproject.org/experiments/ENCSR000BLV transcription factor SRF-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF399HKG https://www.encodeproject.org/files/ENCFF399HKG/@@download/ENCFF399HKG.bam ENCFF994EXN https://www.encodeproject.org/files/ENCFF994EXN/@@download/ENCFF994EXN.bam 30.2 M 0 27.3 M 0.903 SE 36 36 native 0.0 M 21.1 M 15.0 M 0.496 0.71 0.70 3.05 105 1.16 3.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/3397874d-71cc-47b4-8f21-72b86cd973ee/@@download/cross_correlation_plot/ENCFF000PQU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSB richard-myers:SL3156 ENCFF000PQU Illumina Genome Analyzer IIx 2016-12-11T04:51:55.064920+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16625j0369KQ3Yk1yz1kgxy ENCSR000BLV https://www.encodeproject.org/experiments/ENCSR000BLV transcription factor SRF-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF743QME https://www.encodeproject.org/files/ENCFF743QME/@@download/ENCFF743QME.bam ENCFF906MEW https://www.encodeproject.org/files/ENCFF906MEW/@@download/ENCFF906MEW.bam 37.3 M 0 33.5 M 0.897 SE 36 36 native 0.0 M 24.5 M 19.2 M 0.515 0.79 0.78 4.36 95 1.16 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/3fa72a32-64aa-4a9b-8a87-56ba495781ca/@@download/cross_correlation_plot/ENCFF000PQW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSC richard-myers:SL3275 ENCFF000PQW Illumina Genome Analyzer IIx 2016-12-11T04:56:12.071361+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1662Bj0369KbxV61z4GFvpG ENCSR000BJN https://www.encodeproject.org/experiments/ENCSR000BJN transcription factor TAF1-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF765NFJ https://www.encodeproject.org/files/ENCFF765NFJ/@@download/ENCFF765NFJ.bam ENCFF279GXK https://www.encodeproject.org/files/ENCFF279GXK/@@download/ENCFF279GXK.bam 42.1 M 0 23.7 M 0.562 SE 36 36 native 0.0 M 15.0 M 13.1 M 0.310 0.89 0.90 9.56 90 1.61 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc4d4967-835c-455a-8c17-c716bc35d83d/@@download/cross_correlation_plot/ENCFF000PRD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQT richard-myers:SL358 ENCFF000PRD Illumina Genome Analyzer IIx 2016-12-11T01:11:28.882375+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Zgj03692BKq0F3V3jFY4 ENCSR000BJN https://www.encodeproject.org/experiments/ENCSR000BJN transcription factor TAF1-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF446TLJ https://www.encodeproject.org/files/ENCFF446TLJ/@@download/ENCFF446TLJ.bam ENCFF486FRS https://www.encodeproject.org/files/ENCFF486FRS/@@download/ENCFF486FRS.bam 34.5 M 0 20.9 M 0.605 SE 36 36 native 0.0 M 13.8 M 11.5 M 0.334 0.84 0.85 6.35 95 1.84 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/81708e5f-c03e-43e6-af60-6e16145accc8/@@download/cross_correlation_plot/ENCFF000PRB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQU richard-myers:SL359 ENCFF000PRB Illumina Genome Analyzer IIx 2016-12-11T00:46:35.474874+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163ZvQ03699K237J9jY9kb4 ENCSR000BJG https://www.encodeproject.org/experiments/ENCSR000BJG transcription factor TCF12-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF167ZAW https://www.encodeproject.org/files/ENCFF167ZAW/@@download/ENCFF167ZAW.bam ENCFF424JUA https://www.encodeproject.org/files/ENCFF424JUA/@@download/ENCFF424JUA.bam 33.1 M 0 23.7 M 0.717 SE 36 36 native 0.0 M 17.3 M 11.7 M 0.355 0.68 0.66 2.73 100 1.28 2.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bb10add-ca83-4ef0-b8f5-f8c78c84e7fe/@@download/cross_correlation_plot/ENCFF000PRJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWP richard-myers:SL1060 ENCFF000PRJ Illumina Genome Analyzer IIx 2016-12-11T02:45:06.200458+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1640K003697yz601ypVJ39y ENCSR000BJG https://www.encodeproject.org/experiments/ENCSR000BJG transcription factor TCF12-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF948DOF https://www.encodeproject.org/files/ENCFF948DOF/@@download/ENCFF948DOF.bam ENCFF382ZGT https://www.encodeproject.org/files/ENCFF382ZGT/@@download/ENCFF382ZGT.bam 40.5 M 0 34.7 M 0.857 SE 36 36 native 0.0 M 24.5 M 23.4 M 0.578 0.96 0.96 24.57 125 1.08 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/2294e13d-e153-44a7-a4e6-fe3224580fa2/@@download/cross_correlation_plot/ENCFF000PRL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWO richard-myers:SL1167 ENCFF000PRL Illumina Genome Analyzer IIx 2016-12-11T03:01:21.032384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1640Y003699Z3Y8493qbq09 ENCSR444LIN https://www.encodeproject.org/experiments/ENCSR444LIN transcription factor TCF7-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF604ODF https://www.encodeproject.org/files/ENCFF604ODF/@@download/ENCFF604ODF.bam ENCFF861DPR https://www.encodeproject.org/files/ENCFF861DPR/@@download/ENCFF861DPR.bam 25.5 M 0 24.8 M 0.972 SE 50 50 native 0.0 M 20.5 M 19.6 M 0.768 0.96 0.96 27.68 145 1.16 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/5fe8953e-c104-41c5-a667-9f16ad294b61/@@download/cross_correlation_plot/ENCFF153EWU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB554ODG richard-myers:SL49690 ENCFF153EWU HiSeq 2000 2016-10-09T17:01:19.951887+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Pgj0jv1qJ3fJpV1YPf9p ENCSR444LIN https://www.encodeproject.org/experiments/ENCSR444LIN transcription factor TCF7-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF523HQR https://www.encodeproject.org/files/ENCFF523HQR/@@download/ENCFF523HQR.bam ENCFF760LLP https://www.encodeproject.org/files/ENCFF760LLP/@@download/ENCFF760LLP.bam 25.5 M 0 24.3 M 0.954 SE 50 50 native 0.0 M 19.5 M 18.8 M 0.737 0.97 0.97 41.45 120 1.28 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/318be244-7121-456a-b11e-6d1ecdaeeeb1/@@download/cross_correlation_plot/ENCFF204ZXN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB358YIP richard-myers:SL58299 ENCFF204ZXN HiSeq 2000 2016-10-09T17:00:53.982425+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Px00jv1k8yv12k9xk5jV ENCSR000BRP https://www.encodeproject.org/experiments/ENCSR000BRP transcription factor TEAD4-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF175QJE https://www.encodeproject.org/files/ENCFF175QJE/@@download/ENCFF175QJE.bam ENCFF679SAE https://www.encodeproject.org/files/ENCFF679SAE/@@download/ENCFF679SAE.bam 40.7 M 0 36.9 M 0.906 SE 36 36 native 0.0 M 28.2 M 26.1 M 0.641 0.94 0.95 19.22 135 1.12 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/785f86f2-9606-4edc-ac58-398f7bbceb58/@@download/cross_correlation_plot/ENCFF000PRU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYF richard-myers:SL8584 ENCFF000PRU Illumina Genome Analyzer IIx 2016-12-11T06:45:02.883601+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166F9j03692yykb1zBpz84p ENCSR000BRP https://www.encodeproject.org/experiments/ENCSR000BRP transcription factor TEAD4-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF993OXP https://www.encodeproject.org/files/ENCFF993OXP/@@download/ENCFF993OXP.bam ENCFF190VOP https://www.encodeproject.org/files/ENCFF190VOP/@@download/ENCFF190VOP.bam 6.5 M 0 5.8 M 0.903 SE 36 36 native 0.0 M 4.4 M 4.3 M 0.666 0.99 0.99 77.41 110 1.10 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a01d612-0f8e-4fb5-9f26-06426af142ec/@@download/cross_correlation_plot/ENCFF000PRQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYG richard-myers:SL9545 ENCFF000PRQ Illumina Genome Analyzer IIx 2016-12-11T04:47:13.548986+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166FPj0369PvYp91zK1Pxkg ENCSR103SZL https://www.encodeproject.org/experiments/ENCSR103SZL transcription factor TFAP4-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF340QRX https://www.encodeproject.org/files/ENCFF340QRX/@@download/ENCFF340QRX.bam ENCFF257FVX https://www.encodeproject.org/files/ENCFF257FVX/@@download/ENCFF257FVX.bam 40.4 M 0 37.5 M 0.928 SE 50 50 native 0.0 M 31.0 M 29.2 M 0.721 0.95 0.95 23.66 115 1.23 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/3849d1cc-b3ea-4ba7-a070-65f24354701b/@@download/cross_correlation_plot/ENCFF813TPE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB752UWA richard-myers:SL65261 ENCFF813TPE HiSeq 2000 2016-10-09T17:10:36.543278+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3v8j0jv1vY92b0GYjVFZ1 ENCSR103SZL https://www.encodeproject.org/experiments/ENCSR103SZL transcription factor TFAP4-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF319BJC https://www.encodeproject.org/files/ENCFF319BJC/@@download/ENCFF319BJC.bam ENCFF884PQP https://www.encodeproject.org/files/ENCFF884PQP/@@download/ENCFF884PQP.bam 22.3 M 0 21.4 M 0.962 SE 50 50 native 0.0 M 17.8 M 16.8 M 0.755 0.95 0.95 21.60 120 1.06 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd3f90ae-cde7-4884-80d0-9f5558343739/@@download/cross_correlation_plot/ENCFF822SMI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB145YQX richard-myers:SL37053 ENCFF822SMI HiSeq 2000 2016-10-09T17:09:46.695755+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3vB80jv1XvFGkBjjfjQ1j ENCSR000BGM https://www.encodeproject.org/experiments/ENCSR000BGM transcription factor USF1-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF582CJF https://www.encodeproject.org/files/ENCFF582CJF/@@download/ENCFF582CJF.bam ENCFF985USW https://www.encodeproject.org/files/ENCFF985USW/@@download/ENCFF985USW.bam 43.3 M 0 23.4 M 0.541 SE 36 36 native 0.0 M 15.2 M 12.6 M 0.292 0.83 0.84 6.33 95 1.60 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6e868f7-42c2-452c-b4b3-d2ce49b706d8/@@download/cross_correlation_plot/ENCFF000PSA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGG richard-myers:SL582 ENCFF000PSA Illumina Genome Analyzer IIx 2016-12-11T06:44:19.346917+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166P3803692BKq0F3V3jFjY ENCSR000BGM https://www.encodeproject.org/experiments/ENCSR000BGM transcription factor USF1-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF270TGL https://www.encodeproject.org/files/ENCFF270TGL/@@download/ENCFF270TGL.bam ENCFF298ULD https://www.encodeproject.org/files/ENCFF298ULD/@@download/ENCFF298ULD.bam 57.0 M 0 34.2 M 0.601 SE 36 36 native 0.0 M 23.8 M 20.4 M 0.358 0.86 0.91 13.39 95 1.58 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/dcda3e6b-87fc-49f6-a031-0c56ecf97a5f/@@download/cross_correlation_plot/ENCFF000PSH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGF richard-myers:SL636 ENCFF000PSH Illumina Genome Analyzer IIx 2016-12-11T09:31:32.873637+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166PB00369KQ3Yk1yz1kj24 ENCSR000BNT https://www.encodeproject.org/experiments/ENCSR000BNT transcription factor YY1-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF056BXB https://www.encodeproject.org/files/ENCFF056BXB/@@download/ENCFF056BXB.bam ENCFF748ERK https://www.encodeproject.org/files/ENCFF748ERK/@@download/ENCFF748ERK.bam 38.3 M 0 23.0 M 0.601 SE 36 36 native 0.0 M 17.2 M 8.8 M 0.230 0.52 0.51 1.84 140 3.19 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/d81f025e-00cd-484c-8971-e2f37d90628d/@@download/cross_correlation_plot/ENCFF000PSE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCG richard-myers:SL2195 ENCFF000PSE Illumina Genome Analyzer IIx 2016-12-10T20:54:37.606422+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1631VQ0369445BJJ915X9fj ENCSR000BNT https://www.encodeproject.org/experiments/ENCSR000BNT transcription factor YY1-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF499BAH https://www.encodeproject.org/files/ENCFF499BAH/@@download/ENCFF499BAH.bam ENCFF421OBJ https://www.encodeproject.org/files/ENCFF421OBJ/@@download/ENCFF421OBJ.bam 23.3 M 0 20.4 M 0.877 SE 36 36 native 0.0 M 15.5 M 13.9 M 0.599 0.90 0.91 11.19 120 1.31 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/eaefe70b-5d4a-4ae3-a5d7-b617d72d0c75/@@download/cross_correlation_plot/ENCFF000PSD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCH richard-myers:SL3927 ENCFF000PSD Illumina Genome Analyzer IIx 2016-12-10T20:48:59.362990+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1631fQ036993F1b953B4Pzy ENCSR000BHR https://www.encodeproject.org/experiments/ENCSR000BHR transcription factor ZBTB33-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF047SQQ https://www.encodeproject.org/files/ENCFF047SQQ/@@download/ENCFF047SQQ.bam ENCFF453LST https://www.encodeproject.org/files/ENCFF453LST/@@download/ENCFF453LST.bam 24.6 M 0 18.9 M 0.770 SE 36 36 native 0.0 M 12.7 M 12.3 M 0.501 0.97 0.98 41.37 100 1.10 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/074c6288-7036-47c1-891d-ee16d66acebf/@@download/cross_correlation_plot/ENCFF000PSP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJI richard-myers:SL981 ENCFF000PSP Illumina Genome Analyzer IIx 2016-12-11T04:34:33.078554+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165jj80369BJyPz9fb9qYJJ ENCSR000BHR https://www.encodeproject.org/experiments/ENCSR000BHR transcription factor ZBTB33-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF578MBG https://www.encodeproject.org/files/ENCFF578MBG/@@download/ENCFF578MBG.bam ENCFF766SGR https://www.encodeproject.org/files/ENCFF766SGR/@@download/ENCFF766SGR.bam 45.5 M 0 36.0 M 0.790 SE 36 36 native 0.0 M 26.2 M 24.7 M 0.542 0.96 0.97 30.65 120 1.06 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/8c0564cf-12ea-439e-b6c0-5518c54d1f44/@@download/cross_correlation_plot/ENCFF000PSW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNU richard-myers:SL1055 ENCFF000PSW Illumina Genome Analyzer IIx 2016-12-11T04:48:17.672535+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165jx003690xXYVJ7Fj2f7z ENCSR000BNA https://www.encodeproject.org/experiments/ENCSR000BNA transcription factor ZBTB33-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF015CKI https://www.encodeproject.org/files/ENCFF015CKI/@@download/ENCFF015CKI.bam ENCFF280TIY https://www.encodeproject.org/files/ENCFF280TIY/@@download/ENCFF280TIY.bam 24.8 M 0 21.9 M 0.884 SE 36 36 native 0.0 M 16.4 M 9.2 M 0.372 0.57 0.52 1.84 115 1.16 2.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/d420a1b0-aa06-4abe-809c-7a4e129058d2/@@download/cross_correlation_plot/ENCFF000PST.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXV richard-myers:SL3929 ENCFF000PST Illumina Genome Analyzer IIx 2016-12-11T04:24:15.970766+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Z300369PvYp91zK1PxZQ ENCSR000BNA https://www.encodeproject.org/experiments/ENCSR000BNA transcription factor ZBTB33-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF148ZDV https://www.encodeproject.org/files/ENCFF148ZDV/@@download/ENCFF148ZDV.bam ENCFF712OEW https://www.encodeproject.org/files/ENCFF712OEW/@@download/ENCFF712OEW.bam 28.5 M 0 26.2 M 0.917 SE 36 36 native 0.0 M 19.7 M 17.7 M 0.619 0.90 0.90 9.91 105 1.09 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/7b1623ed-59e4-4f4b-a5a5-a8dfaaf734a9/@@download/cross_correlation_plot/ENCFF000PSY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDX richard-myers:SL3987 ENCFF000PSY Illumina Genome Analyzer IIx 2016-12-11T04:29:42.880123+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Z7j03697yz601ypVJ3gk ENCSR000BQA https://www.encodeproject.org/experiments/ENCSR000BQA transcription factor ZBTB7A-human HepG2 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF105MNZ https://www.encodeproject.org/files/ENCFF105MNZ/@@download/ENCFF105MNZ.bam ENCFF506FSB https://www.encodeproject.org/files/ENCFF506FSB/@@download/ENCFF506FSB.bam 26.0 M 0 22.3 M 0.856 SE 36 36 native 0.0 M 16.9 M 12.9 M 0.497 0.77 0.76 3.88 90 1.19 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/620ee004-267d-41b5-b762-9c4f08891e55/@@download/cross_correlation_plot/ENCFF000PTF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFO richard-myers:SL3973 ENCFF000PTF Illumina Genome Analyzer IIx 2016-12-11T04:20:48.993881+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165PkQ0369GF0YB1zjPf6z1 ENCSR000BQA https://www.encodeproject.org/experiments/ENCSR000BQA transcription factor ZBTB7A-human HepG2 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF739SSM https://www.encodeproject.org/files/ENCFF739SSM/@@download/ENCFF739SSM.bam ENCFF527VCX https://www.encodeproject.org/files/ENCFF527VCX/@@download/ENCFF527VCX.bam 42.0 M 0 28.8 M 0.686 SE 36 36 native 0.0 M 21.4 M 11.5 M 0.274 0.60 0.58 2.25 100 1.24 3.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab4af5b1-11c4-4260-bac3-7114f866beae/@@download/cross_correlation_plot/ENCFF000PTI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJN richard-myers:SL6464 ENCFF000PTI Illumina Genome Analyzer IIx 2016-12-11T04:26:03.307970+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Pyj0369BgG8x1ygv1XKq ENCSR000BVN https://www.encodeproject.org/experiments/ENCSR000BVN transcription factor ZEB1-human HepG2 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR407BEZ https://www.encodeproject.org/experiments/ENCSR407BEZ transcription factor ZHX2-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF638HCT https://www.encodeproject.org/files/ENCFF638HCT/@@download/ENCFF638HCT.bam ENCFF173HSS https://www.encodeproject.org/files/ENCFF173HSS/@@download/ENCFF173HSS.bam 23.8 M 0 23.0 M 0.964 SE 50 50 native 0.0 M 18.7 M 17.9 M 0.753 0.97 0.97 34.66 85 1.09 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/7208b505-4c57-4cc4-9a34-981d7512ffa0/@@download/cross_correlation_plot/ENCFF002BFE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB496HSC richard-myers:SL41780 ENCFF002BFE HiSeq 2000 2016-10-09T16:59:44.222922+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44v00jv1vY92b0GYjVFvB ENCSR407BEZ https://www.encodeproject.org/experiments/ENCSR407BEZ transcription factor ZHX2-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF883YOY https://www.encodeproject.org/files/ENCFF883YOY/@@download/ENCFF883YOY.bam ENCFF787ECE https://www.encodeproject.org/files/ENCFF787ECE/@@download/ENCFF787ECE.bam 36.7 M 0 35.0 M 0.954 SE 50 50 native 0.0 M 28.3 M 27.2 M 0.742 0.97 0.97 29.98 90 1.05 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/98664e22-5e00-4ded-9455-1109d747f749/@@download/cross_correlation_plot/ENCFF002BFF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB262RNH richard-myers:SL43819 ENCFF002BFF HiSeq 2000 2016-10-09T17:00:38.701105+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44x80jv1QxJBfj5Zb2pfx ENCSR848YWD https://www.encodeproject.org/experiments/ENCSR848YWD transcription factor ZMYM3-human HepG2 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF932FED https://www.encodeproject.org/files/ENCFF932FED/@@download/ENCFF932FED.bam ENCFF788STB https://www.encodeproject.org/files/ENCFF788STB/@@download/ENCFF788STB.bam 35.7 M 0 34.0 M 0.952 SE 50 50 50 0.0 M 26.8 M 26.2 M 0.733 0.98 0.98 53.32 90 1.05 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c73b0e6-9ee7-46a1-9c13-4f0320f3aef0/@@download/cross_correlation_plot/ENCFF017GOO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB741ATD richard-myers:SL65248 ENCFF017GOO HiSeq 2000 2016-09-01T17:44:23.067000+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V880036922jKJP1QkzXfQ ENCSR848YWD https://www.encodeproject.org/experiments/ENCSR848YWD transcription factor ZMYM3-human HepG2 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF361SFX https://www.encodeproject.org/files/ENCFF361SFX/@@download/ENCFF361SFX.bam ENCFF717YXY https://www.encodeproject.org/files/ENCFF717YXY/@@download/ENCFF717YXY.bam 25.6 M 0 24.8 M 0.968 SE 76 50 50 0.0 M 20.0 M 19.4 M 0.759 0.97 0.97 36.62 115 1.04 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/a67c38fe-7b95-4f6f-b97f-4efb0422235f/@@download/cross_correlation_plot/ENCFF705KCW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB445YBO richard-myers:SL146876 ENCFF705KCW HiSeq 2000 2016-09-01T17:43:16.461950+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V8F803698gB8K9bQggXf7 ENCSR000BVU https://www.encodeproject.org/experiments/ENCSR000BVU control Control-human HL-60 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF895MWF https://www.encodeproject.org/files/ENCFF895MWF/@@download/ENCFF895MWF.bam ENCFF642UHU https://www.encodeproject.org/files/ENCFF642UHU/@@download/ENCFF642UHU.bam 28.6 M 0 26.9 M 0.941 SE 50 50 native 0.0 M 21.9 M 21.5 M 0.753 0.99 0.99 158.77 65 1.03 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/e78f8e69-f063-4b3d-81e0-3e85b5f524a9/@@download/cross_correlation_plot/ENCFF000PVC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFR richard-myers:SL12792 ENCFF000PVC HiSeq 2000 2017-06-16T18:55:41.480529+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F520z18036994yvPP7FKF2QV ENCSR000BVU https://www.encodeproject.org/experiments/ENCSR000BVU control Control-human HL-60 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF414MKM https://www.encodeproject.org/files/ENCFF414MKM/@@download/ENCFF414MKM.bam ENCFF494VIW https://www.encodeproject.org/files/ENCFF494VIW/@@download/ENCFF494VIW.bam 27.9 M 0 21.9 M 0.786 SE 50 50 native 0.0 M 12.5 M 12.2 M 0.439 0.98 0.99 77.91 80 1.06 0.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/e924c16d-69ff-41b1-994d-d59a1f871102/@@download/cross_correlation_plot/ENCFF000PVZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDI richard-myers:SL16759 ENCFF000PVZ HiSeq 2000 2017-06-16T18:57:18.686415+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F520z4Q036950fvbFx6gg6Fj ENCSR000BTK https://www.encodeproject.org/experiments/ENCSR000BTK transcription factor GABPA-human HL-60 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF282IXA https://www.encodeproject.org/files/ENCFF282IXA/@@download/ENCFF282IXA.bam ENCFF540XOR https://www.encodeproject.org/files/ENCFF540XOR/@@download/ENCFF540XOR.bam 27.4 M 0 24.8 M 0.905 SE 50 50 native 0.0 M 20.9 M 18.9 M 0.691 0.92 0.92 12.34 145 1.17 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/bca519a8-a658-47c5-986a-6724e168b7f2/@@download/cross_correlation_plot/ENCFF000PTV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLZ richard-myers:SL12633 ENCFF000PTV HiSeq 2000 2017-04-14T18:25:42.940087+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1Jk80369542GF6Gxgz7F8 ENCSR000BTK https://www.encodeproject.org/experiments/ENCSR000BTK transcription factor GABPA-human HL-60 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF662PDI https://www.encodeproject.org/files/ENCFF662PDI/@@download/ENCFF662PDI.bam ENCFF728ACG https://www.encodeproject.org/files/ENCFF728ACG/@@download/ENCFF728ACG.bam 23.0 M 0 21.1 M 0.917 SE 50 50 native 0.0 M 17.4 M 16.5 M 0.717 0.95 0.96 25.32 110 1.26 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/3dba1f08-ee83-442a-9fd5-14698cd08f02/@@download/cross_correlation_plot/ENCFF000PTU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMA richard-myers:SL16321 ENCFF000PTU HiSeq 2000 2017-04-14T18:25:21.996064+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1Jz803694bgB52YPgFJzv ENCSR000BTL https://www.encodeproject.org/experiments/ENCSR000BTL "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human HL-60 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF721MRE https://www.encodeproject.org/files/ENCFF721MRE/@@download/ENCFF721MRE.bam ENCFF351FZG https://www.encodeproject.org/files/ENCFF351FZG/@@download/ENCFF351FZG.bam 26.9 M 0 26.1 M 0.971 SE 50 50 native 0.0 M 21.8 M 21.1 M 0.785 0.97 0.97 37.94 110 1.19 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ff25444-dbe8-4eb3-8d87-8777ff759ee8/@@download/cross_correlation_plot/ENCFF000PUJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRC richard-myers:SL12628 ENCFF000PUJ HiSeq 2000 2017-04-14T18:25:25.057005+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1K4j03696vv3xJBbkJX8Z ENCSR000BTL https://www.encodeproject.org/experiments/ENCSR000BTL "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human HL-60 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF668VZA https://www.encodeproject.org/files/ENCFF668VZA/@@download/ENCFF668VZA.bam ENCFF794LFP https://www.encodeproject.org/files/ENCFF794LFP/@@download/ENCFF794LFP.bam 20.7 M 0 19.8 M 0.954 SE 50 50 native 0.0 M 15.9 M 15.1 M 0.727 0.95 0.96 25.99 105 1.60 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/f4e5c558-0621-4b2a-9fc5-8109a8883d6e/@@download/cross_correlation_plot/ENCFF000PUI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBJ richard-myers:SL16322 ENCFF000PUI HiSeq 2000 2017-04-14T18:25:23.406289+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1KB803694bgB52YPgFK05 ENCSR000BTF https://www.encodeproject.org/experiments/ENCSR000BTF "transcription factor,chromatin remodeller" REST-human HL-60 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF058RXV https://www.encodeproject.org/files/ENCFF058RXV/@@download/ENCFF058RXV.bam ENCFF027UBI https://www.encodeproject.org/files/ENCFF027UBI/@@download/ENCFF027UBI.bam 27.6 M 0 26.0 M 0.941 SE 50 50 native 0.0 M 22.3 M 19.1 M 0.692 0.87 0.94 20.23 125 1.55 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/05b7ccbd-343c-4f41-b927-8170fddc8b36/@@download/cross_correlation_plot/ENCFF000PUD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHN richard-myers:SL12632 ENCFF000PUD HiSeq 2000 2017-04-14T18:25:59.066250+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1JK803698Gx0Y14BFQ0Y6 ENCSR000BTF https://www.encodeproject.org/experiments/ENCSR000BTF "transcription factor,chromatin remodeller" REST-human HL-60 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF372SGD https://www.encodeproject.org/files/ENCFF372SGD/@@download/ENCFF372SGD.bam ENCFF704CFG https://www.encodeproject.org/files/ENCFF704CFG/@@download/ENCFF704CFG.bam 52.6 M 0 47.2 M 0.898 SE 50 50 native 0.0 M 37.2 M 33.2 M 0.632 0.91 0.93 14.22 75 1.14 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a8b0630-f596-4033-8634-ffe18b2a403d/@@download/cross_correlation_plot/ENCFF000PUO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHM richard-myers:SL13747 ENCFF000PUO HiSeq 2000 2017-04-14T18:27:26.326187+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1JYj0369FP2fv6GY819kx ENCSR000BUW https://www.encodeproject.org/experiments/ENCSR000BUW transcription factor SPI1-human HL-60 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF031PGD https://www.encodeproject.org/files/ENCFF031PGD/@@download/ENCFF031PGD.bam ENCFF599RTB https://www.encodeproject.org/files/ENCFF599RTB/@@download/ENCFF599RTB.bam 27.6 M 0 25.2 M 0.914 SE 50 50 native 0.0 M 21.6 M 18.2 M 0.661 0.85 0.86 7.58 110 2.10 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/0b030814-e025-48c6-a225-eac1876743be/@@download/cross_correlation_plot/ENCFF000PUS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIS richard-myers:SL12629 ENCFF000PUS HiSeq 2000 2017-04-14T18:25:40.763088+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1KQ80369JQvVQ3g0ZZggG ENCSR000BUW https://www.encodeproject.org/experiments/ENCSR000BUW transcription factor SPI1-human HL-60 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF292UNW https://www.encodeproject.org/files/ENCFF292UNW/@@download/ENCFF292UNW.bam ENCFF155RGC https://www.encodeproject.org/files/ENCFF155RGC/@@download/ENCFF155RGC.bam 21.9 M 0 20.7 M 0.947 SE 50 50 native 0.0 M 17.1 M 15.7 M 0.717 0.92 0.92 12.59 95 1.20 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ad94245-22f0-4d0c-b350-5f6e77b4f65d/@@download/cross_correlation_plot/ENCFF000PUT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIR richard-myers:SL14712 ENCFF000PUT HiSeq 2000 2017-04-14T18:25:12.407335+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1Kb803694zxY41J44g3Px ENCSR447FVP https://www.encodeproject.org/experiments/ENCSR447FVP control Control-human induced pluripotent stem cell induced pluripotent stem cell line 1 richard-myers ENCODE3 GRCh38 ENCFF982GQU https://www.encodeproject.org/files/ENCFF982GQU/@@download/ENCFF982GQU.bam ENCFF150GGB https://www.encodeproject.org/files/ENCFF150GGB/@@download/ENCFF150GGB.bam 31.8 M 0 30.8 M 0.967 SE 50 50 None 0.0 M 26.3 M 25.7 M 0.809 0.99 0.99 108.49 70 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/c309dbf7-4ecc-4279-8419-7fd63830a3c0/@@download/cross_correlation_plot/ENCFF484RXR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB818SEQ richard-myers:SL124781 ENCFF484RXR HiSeq 2000 2016-05-06T18:12:36.928603+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqJ9j036929FJGg42Xq1xJ ENCSR655HDE https://www.encodeproject.org/experiments/ENCSR655HDE control Control-human induced pluripotent stem cell induced pluripotent stem cell line 1 richard-myers ENCODE3 GRCh38 ENCFF341IVK https://www.encodeproject.org/files/ENCFF341IVK/@@download/ENCFF341IVK.bam ENCFF308CYL https://www.encodeproject.org/files/ENCFF308CYL/@@download/ENCFF308CYL.bam 28.4 M 0 27.2 M 0.959 SE 50 50 None 0.0 M 22.7 M 22.3 M 0.787 0.99 0.99 139.50 70 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/db5b0aed-5dbc-4155-9751-de936853aad1/@@download/cross_correlation_plot/ENCFF252PYF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB042OLW richard-myers:SL124793 ENCFF252PYF HiSeq 2000 2016-05-06T18:07:32.035537+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqVvj036929FJGg42Xq24J ENCSR932ZMX https://www.encodeproject.org/experiments/ENCSR932ZMX "transcription factor,RNA binding protein" CTCF-human induced pluripotent stem cell induced pluripotent stem cell line 1 richard-myers ENCODE3 GRCh38 ENCFF703HZB https://www.encodeproject.org/files/ENCFF703HZB/@@download/ENCFF703HZB.bam ENCFF244ZCX https://www.encodeproject.org/files/ENCFF244ZCX/@@download/ENCFF244ZCX.bam 25.3 M 0 24.5 M 0.968 SE 50 50 native 0.0 M 21.8 M 18.6 M 0.733 0.86 0.90 13.22 95 3.21 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/b60a6f6f-a7d2-43cd-b57a-5bf3bc108169/@@download/cross_correlation_plot/ENCFF769AJC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB429BWA richard-myers:SL124780 ENCFF769AJC HiSeq 2000 2017-01-25T20:32:44.278369+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K8zQ03698k8BZGpKx02x1 ENCSR932ZMX https://www.encodeproject.org/experiments/ENCSR932ZMX "transcription factor,RNA binding protein" CTCF-human induced pluripotent stem cell induced pluripotent stem cell line 2 richard-myers ENCODE3 GRCh38 ENCFF102OPY https://www.encodeproject.org/files/ENCFF102OPY/@@download/ENCFF102OPY.bam ENCFF028LSE https://www.encodeproject.org/files/ENCFF028LSE/@@download/ENCFF028LSE.bam 24.5 M 0 23.9 M 0.975 SE 50 50 native 0.0 M 21.0 M 16.6 M 0.678 0.81 0.86 10.86 95 4.41 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/e447375e-c160-4cfc-926b-0f32f11fabf7/@@download/cross_correlation_plot/ENCFF566LFO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB869CAM richard-myers:SL124789 ENCFF566LFO HiSeq 2000 2017-01-25T20:32:19.693805+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB2803693Jf2v97QJ7b9j ENCSR534VHI https://www.encodeproject.org/experiments/ENCSR534VHI transcription factor ETS1-human induced pluripotent stem cell induced pluripotent stem cell line 1 richard-myers ENCODE3 GRCh38 ENCFF938DPX https://www.encodeproject.org/files/ENCFF938DPX/@@download/ENCFF938DPX.bam ENCFF263RQB https://www.encodeproject.org/files/ENCFF263RQB/@@download/ENCFF263RQB.bam 24.8 M 0 24.1 M 0.971 SE 50 50 native 0.0 M 20.5 M 20.1 M 0.810 0.98 0.98 52.60 100 1.06 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/98c66c3b-124a-4451-b27c-8e32d21c8387/@@download/cross_correlation_plot/ENCFF498JVT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB788PPK richard-myers:SL124776 ENCFF498JVT HiSeq 2000 2016-10-09T17:09:25.003407+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zvj0jv1g5yGjfvVx0KvQ ENCSR534VHI https://www.encodeproject.org/experiments/ENCSR534VHI transcription factor ETS1-human induced pluripotent stem cell induced pluripotent stem cell line 2 richard-myers ENCODE3 GRCh38 ENCFF200FYK https://www.encodeproject.org/files/ENCFF200FYK/@@download/ENCFF200FYK.bam ENCFF338SEN https://www.encodeproject.org/files/ENCFF338SEN/@@download/ENCFF338SEN.bam 28.1 M 0 27.3 M 0.970 SE 50 50 native 0.0 M 22.9 M 22.5 M 0.798 0.98 0.98 53.50 85 1.06 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/dde0b906-007d-4eea-b583-149fb1730885/@@download/cross_correlation_plot/ENCFF886ZJD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB325EHR richard-myers:SL124785 ENCFF886ZJD HiSeq 2000 2016-10-09T17:09:38.241877+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3zy80jv1XvFGkBjjfjQ5P ENCSR917MAH https://www.encodeproject.org/experiments/ENCSR917MAH transcription factor JUNB-human induced pluripotent stem cell induced pluripotent stem cell line 1 richard-myers ENCODE3 GRCh38 ENCFF679WEC https://www.encodeproject.org/files/ENCFF679WEC/@@download/ENCFF679WEC.bam ENCFF885PKA https://www.encodeproject.org/files/ENCFF885PKA/@@download/ENCFF885PKA.bam 27.9 M 0 26.8 M 0.960 SE 50 50 native 0.0 M 22.2 M 21.7 M 0.778 0.98 0.98 51.33 80 1.04 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/a71d397d-a433-4e6e-8451-df2ec82df5bf/@@download/cross_correlation_plot/ENCFF699DNK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB663MRT richard-myers:SL124786 ENCFF699DNK HiSeq 2000 2016-12-03T15:36:30.583848+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10BKK00369JY9454zXbp2zz ENCSR369NGL https://www.encodeproject.org/experiments/ENCSR369NGL "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human induced pluripotent stem cell induced pluripotent stem cell line 1 richard-myers ENCODE3 GRCh38 ENCFF591JSM https://www.encodeproject.org/files/ENCFF591JSM/@@download/ENCFF591JSM.bam ENCFF852FHU https://www.encodeproject.org/files/ENCFF852FHU/@@download/ENCFF852FHU.bam 27.9 M 0 27.0 M 0.968 SE 50 50 native 0.0 M 23.1 M 22.3 M 0.799 0.97 0.97 37.59 85 1.27 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0f7ba64-e5dc-43ee-b4ae-e3f32bcab3f2/@@download/cross_correlation_plot/ENCFF898YVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB205AEB richard-myers:SL124779 ENCFF898YVQ HiSeq 2000 2016-10-09T17:08:41.034472+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k0Q0jv1XYYX2Fxk3f4ZZ ENCSR369NGL https://www.encodeproject.org/experiments/ENCSR369NGL "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human induced pluripotent stem cell induced pluripotent stem cell line 2 richard-myers ENCODE3 GRCh38 ENCFF122VCH https://www.encodeproject.org/files/ENCFF122VCH/@@download/ENCFF122VCH.bam ENCFF815UJE https://www.encodeproject.org/files/ENCFF815UJE/@@download/ENCFF815UJE.bam 22.5 M 0 22.0 M 0.977 SE 50 50 native 0.0 M 18.5 M 17.9 M 0.794 0.97 0.97 39.92 85 1.43 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/35c7d8fd-d4ff-4e8e-bbe9-2f17e648e8a6/@@download/cross_correlation_plot/ENCFF211BUP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB164SGY richard-myers:SL124788 ENCFF211BUP HiSeq 2000 2016-10-09T17:07:51.333847+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3k1j0jv1vY92b0GYjVFQz ENCSR264RJX https://www.encodeproject.org/experiments/ENCSR264RJX "RNA binding protein,transcription factor" POU5F1-human induced pluripotent stem cell induced pluripotent stem cell line 1 richard-myers ENCODE3 GRCh38 ENCFF720OTS https://www.encodeproject.org/files/ENCFF720OTS/@@download/ENCFF720OTS.bam ENCFF624WCF https://www.encodeproject.org/files/ENCFF624WCF/@@download/ENCFF624WCF.bam 27.1 M 0 26.3 M 0.971 SE 50 50 native 0.0 M 22.5 M 21.9 M 0.808 0.97 0.97 39.85 80 1.03 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ed5b5a1-21cb-425d-81c7-8813a76b695a/@@download/cross_correlation_plot/ENCFF647APA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB412ASZ richard-myers:SL124775 ENCFF647APA HiSeq 2000 2016-10-09T17:00:47.193603+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4V700jv1f60PxyZ9JGPPF ENCSR264RJX https://www.encodeproject.org/experiments/ENCSR264RJX "RNA binding protein,transcription factor" POU5F1-human induced pluripotent stem cell induced pluripotent stem cell line 2 richard-myers ENCODE3 GRCh38 ENCFF582ZOC https://www.encodeproject.org/files/ENCFF582ZOC/@@download/ENCFF582ZOC.bam ENCFF816KPQ https://www.encodeproject.org/files/ENCFF816KPQ/@@download/ENCFF816KPQ.bam 21.9 M 0 21.1 M 0.961 SE 50 50 native 0.0 M 17.7 M 17.2 M 0.786 0.98 0.98 47.06 80 1.06 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8a11c78-ccc0-439d-a2ff-8f681ee6c9bc/@@download/cross_correlation_plot/ENCFF986KEK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB429KAG richard-myers:SL124783 ENCFF986KEK HiSeq 2000 2016-10-09T17:00:12.188623+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4V8Q0jv1QxJBfj5Zb2q3j ENCSR871KYB https://www.encodeproject.org/experiments/ENCSR871KYB "transcription factor,chromatin remodeller" REST-human induced pluripotent stem cell induced pluripotent stem cell line richard-myers ENCODE3 pending SE 50 HiSeq 2000 no available pipeline ENCSR071NFQ https://www.encodeproject.org/experiments/ENCSR071NFQ transcription factor STAT1-human induced pluripotent stem cell induced pluripotent stem cell line 1 richard-myers ENCODE3 GRCh38 ENCFF640HPW https://www.encodeproject.org/files/ENCFF640HPW/@@download/ENCFF640HPW.bam ENCFF382IPZ https://www.encodeproject.org/files/ENCFF382IPZ/@@download/ENCFF382IPZ.bam 24.5 M 0 23.7 M 0.969 SE 50 50 native 0.0 M 19.7 M 19.4 M 0.793 0.99 0.99 70.62 70 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/e443e0d2-6e7a-4e6b-a70d-480398b809de/@@download/cross_correlation_plot/ENCFF170DBN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB865GUA richard-myers:SL124787 ENCFF170DBN HiSeq 2000 2016-12-03T15:36:29.163430+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10BJj00369JY9454zXbp2zb ENCSR000BTT https://www.encodeproject.org/experiments/ENCSR000BTT transcription factor CEBPB-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BKX https://www.encodeproject.org/experiments/ENCSR000BKX control Control-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF016HFH https://www.encodeproject.org/files/ENCFF016HFH/@@download/ENCFF016HFH.bam ENCFF594SRM https://www.encodeproject.org/files/ENCFF594SRM/@@download/ENCFF594SRM.bam 47.6 M 0 37.4 M 0.785 SE 36 36 native 0.0 M 27.6 M 27.4 M 0.576 0.99 0.99 196.88 115 1.01 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/adaaa372-a6fd-4f4b-986c-68a77953cf9d/@@download/cross_correlation_plot/ENCFF000NPN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOF richard-myers:SL1882 ENCFF000NPN Illumina Genome Analyzer IIx 2016-10-26T17:38:41.741486+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082FYj03697KPkyX9BPPq57 ENCSR000BVR https://www.encodeproject.org/experiments/ENCSR000BVR control Control-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BUR https://www.encodeproject.org/experiments/ENCSR000BUR transcription factor CREB1-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BQE https://www.encodeproject.org/experiments/ENCSR000BQE "transcription factor,RNA binding protein" CTCF-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF663MFK https://www.encodeproject.org/files/ENCFF663MFK/@@download/ENCFF663MFK.bam ENCFF913BRO https://www.encodeproject.org/files/ENCFF913BRO/@@download/ENCFF913BRO.bam 22.5 M 0 19.5 M 0.868 SE 36 36 native 0.0 M 14.4 M 13.2 M 0.586 0.91 0.92 11.78 125 1.25 2.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f3c5e31-78e5-40c8-916b-09167568801a/@@download/cross_correlation_plot/ENCFF000NKT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDQ richard-myers:SL2630 ENCFF000NKT Illumina Genome Analyzer IIx 2016-12-12T17:17:25.230584+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1621q80369Bxb30J6x5bYvp ENCSR000BQE https://www.encodeproject.org/experiments/ENCSR000BQE "transcription factor,RNA binding protein" CTCF-human Ishikawa immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF667IDX https://www.encodeproject.org/files/ENCFF667IDX/@@download/ENCFF667IDX.bam ENCFF061THL https://www.encodeproject.org/files/ENCFF061THL/@@download/ENCFF061THL.bam 39.1 M 0 33.7 M 0.863 SE 36 36 native 0.0 M 25.5 M 22.7 M 0.582 0.89 0.89 9.25 100 1.10 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a1e6870-bfbe-4b82-9d87-765abc8d2d10/@@download/cross_correlation_plot/ENCFF000NKZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDP richard-myers:SL3447 ENCFF000NKZ Illumina Genome Analyzer IIx 2016-12-12T17:17:54.269381+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1621zQ03699Z3Y8493qbkzX ENCSR000BSQ https://www.encodeproject.org/experiments/ENCSR000BSQ transcription factor EGR1-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BUE https://www.encodeproject.org/experiments/ENCSR000BUE transcription factor EP300-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BIY https://www.encodeproject.org/experiments/ENCSR000BIY transcription factor ESR1-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF880RHB https://www.encodeproject.org/files/ENCFF880RHB/@@download/ENCFF880RHB.bam ENCFF912ZVI https://www.encodeproject.org/files/ENCFF912ZVI/@@download/ENCFF912ZVI.bam 17.9 M 0 15.5 M 0.868 SE 36 36 native 0.0 M 11.5 M 10.8 M 0.604 0.94 0.95 21.44 125 1.81 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecbd8344-507b-40bb-9bec-1ee63b631b97/@@download/cross_correlation_plot/ENCFF000NMB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXT richard-myers:SL1011 ENCFF000NMB Illumina Genome Analyzer IIx 2016-12-11T02:50:16.459847+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1643G003698j1Pf95Q52xqZ ENCSR000BIY https://www.encodeproject.org/experiments/ENCSR000BIY transcription factor ESR1-human Ishikawa immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF811NLF https://www.encodeproject.org/files/ENCFF811NLF/@@download/ENCFF811NLF.bam ENCFF309VOE https://www.encodeproject.org/files/ENCFF309VOE/@@download/ENCFF309VOE.bam 22.9 M 0 14.9 M 0.651 SE 36 36 native 0.0 M 11.2 M 10.5 M 0.458 0.93 0.94 18.17 135 1.66 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/b02ee2d8-9aad-4309-a63b-21181c2da42e/@@download/cross_correlation_plot/ENCFF000NMD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKF richard-myers:SL1093 ENCFF000NMD Illumina Genome Analyzer IIx 2016-12-11T02:42:12.677833+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1643QQ0369BgG8x1ygv1X2y ENCSR000BIZ https://www.encodeproject.org/experiments/ENCSR000BIZ transcription factor ESR1-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF703HXP https://www.encodeproject.org/files/ENCFF703HXP/@@download/ENCFF703HXP.bam ENCFF893RWF https://www.encodeproject.org/files/ENCFF893RWF/@@download/ENCFF893RWF.bam 20.8 M 0 16.2 M 0.782 SE 36 36 native 0.0 M 11.5 M 11.0 M 0.529 0.95 0.95 21.37 120 1.09 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f05c7b9-f45a-4ac6-84dc-6e94a832ace5/@@download/cross_correlation_plot/ENCFF000NLT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNY richard-myers:SL1034 ENCFF000NLT Illumina Genome Analyzer IIx 2016-12-10T21:30:03.350623+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1638x0036993F1b953B4Q11 ENCSR000BIZ https://www.encodeproject.org/experiments/ENCSR000BIZ transcription factor ESR1-human Ishikawa immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF820TDD https://www.encodeproject.org/files/ENCFF820TDD/@@download/ENCFF820TDD.bam ENCFF514UIR https://www.encodeproject.org/files/ENCFF514UIR/@@download/ENCFF514UIR.bam 25.7 M 0 12.2 M 0.475 SE 36 36 native 0.0 M 9.1 M 8.2 M 0.320 0.90 0.90 9.64 120 1.15 2.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/4bfab713-b073-4481-b249-b1b1c5d188e8/@@download/cross_correlation_plot/ENCFF000NLU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIQ richard-myers:SL1092 ENCFF000NLU Illumina Genome Analyzer IIx 2016-12-10T21:27:42.427980+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16391j0369GF0YB1zjPf6Pv ENCSR000BKL https://www.encodeproject.org/experiments/ENCSR000BKL transcription factor ESR1-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF452EGM https://www.encodeproject.org/files/ENCFF452EGM/@@download/ENCFF452EGM.bam ENCFF637QKC https://www.encodeproject.org/files/ENCFF637QKC/@@download/ENCFF637QKC.bam 13.4 M 0 11.8 M 0.877 SE 36 36 native 0.0 M 8.8 M 7.0 M 0.524 0.80 0.79 4.58 125 1.66 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a6691e3-fd4c-4795-b260-e9cf862d6992/@@download/cross_correlation_plot/ENCFF000NMJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDS richard-myers:SL1049 ENCFF000NMJ Illumina Genome Analyzer IIx 2016-12-11T04:33:34.769647+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165vpj03695yqvv8q311QVJ ENCSR000BKL https://www.encodeproject.org/experiments/ENCSR000BKL transcription factor ESR1-human Ishikawa immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF573TJT https://www.encodeproject.org/files/ENCFF573TJT/@@download/ENCFF573TJT.bam ENCFF464GSU https://www.encodeproject.org/files/ENCFF464GSU/@@download/ENCFF464GSU.bam 17.8 M 0 14.1 M 0.793 SE 36 36 native 0.0 M 10.6 M 9.5 M 0.534 0.90 0.90 10.22 125 1.72 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc3b1998-20ed-41eb-876c-342c6ba639f1/@@download/cross_correlation_plot/ENCFF000NML.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDQ richard-myers:SL1122 ENCFF000NML Illumina Genome Analyzer IIx 2016-12-11T04:36:11.476906+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165vzj0369PvYp91zK1Pxf8 ENCSR000BQR https://www.encodeproject.org/experiments/ENCSR000BQR transcription factor ESR1-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF936SHM https://www.encodeproject.org/files/ENCFF936SHM/@@download/ENCFF936SHM.bam ENCFF888ZGR https://www.encodeproject.org/files/ENCFF888ZGR/@@download/ENCFF888ZGR.bam 20.9 M 0 17.5 M 0.835 SE 36 36 native 0.0 M 12.6 M 10.3 M 0.492 0.82 0.81 5.09 125 1.28 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee2df4c6-685e-4e1b-8732-92c258673e09/@@download/cross_correlation_plot/ENCFF000NLI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLW richard-myers:SL1050 ENCFF000NLI Illumina Genome Analyzer IIx 2016-12-10T22:23:46.603375+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163PVQ03695F8Bk64ff071Z ENCSR000BQR https://www.encodeproject.org/experiments/ENCSR000BQR transcription factor ESR1-human Ishikawa immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF481EDX https://www.encodeproject.org/files/ENCFF481EDX/@@download/ENCFF481EDX.bam ENCFF720TRV https://www.encodeproject.org/files/ENCFF720TRV/@@download/ENCFF720TRV.bam 29.2 M 0 26.4 M 0.903 SE 36 36 native 0.0 M 18.7 M 17.8 M 0.609 0.95 0.96 23.19 100 1.14 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/6353461e-2fb9-4d81-8298-6ea14c832959/@@download/cross_correlation_plot/ENCFF000NLK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBM richard-myers:SL2082 ENCFF000NLK Illumina Genome Analyzer IIx 2016-12-11T00:14:03.754470+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Pf803692pJ09J76g5fzy ENCSR000BKW https://www.encodeproject.org/experiments/ENCSR000BKW transcription factor FOXA1-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF692KWR https://www.encodeproject.org/files/ENCFF692KWR/@@download/ENCFF692KWR.bam ENCFF935PXL https://www.encodeproject.org/files/ENCFF935PXL/@@download/ENCFF935PXL.bam 28.9 M 0 24.0 M 0.829 SE 36 36 native 0.0 M 17.7 M 16.1 M 0.555 0.91 0.90 10.28 115 1.08 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/9191fa2e-496c-430b-866b-380535fe46b2/@@download/cross_correlation_plot/ENCFF000NMR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAN richard-myers:SL1880 ENCFF000NMR Illumina Genome Analyzer IIx 2016-12-11T04:35:00.378924+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165j300369GF0YB1zjPf71Z ENCSR000BKW https://www.encodeproject.org/experiments/ENCSR000BKW transcription factor FOXA1-human Ishikawa immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF311UOI https://www.encodeproject.org/files/ENCFF311UOI/@@download/ENCFF311UOI.bam ENCFF129LRB https://www.encodeproject.org/files/ENCFF129LRB/@@download/ENCFF129LRB.bam 27.2 M 0 23.0 M 0.845 SE 36 36 native 0.0 M 16.5 M 15.7 M 0.579 0.95 0.96 22.26 100 1.10 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/a84acead-46fe-4647-b17e-c826a6c8064b/@@download/cross_correlation_plot/ENCFF000NMT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRD richard-myers:SL2080 ENCFF000NMT Illumina Genome Analyzer IIx 2016-12-11T04:38:34.779558+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165j8003698j1Pf95Q52xy9 ENCSR000BUS https://www.encodeproject.org/experiments/ENCSR000BUS transcription factor FOXM1-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BTY https://www.encodeproject.org/experiments/ENCSR000BTY transcription factor MAX-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BUT https://www.encodeproject.org/experiments/ENCSR000BUT transcription factor NFIC-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BJC https://www.encodeproject.org/experiments/ENCSR000BJC transcription factor NR3C1-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF755GJA https://www.encodeproject.org/files/ENCFF755GJA/@@download/ENCFF755GJA.bam ENCFF968HPB https://www.encodeproject.org/files/ENCFF968HPB/@@download/ENCFF968HPB.bam 15.0 M 0 12.5 M 0.832 SE 36 36 native 0.0 M 9.3 M 8.8 M 0.583 0.95 0.95 19.91 100 1.32 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/8dc402db-a17b-480a-84b1-30d1a86f36ed/@@download/cross_correlation_plot/ENCFF000NNB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPZ richard-myers:SL1012 ENCFF000NNB Illumina Genome Analyzer IIx 2016-12-10T23:27:10.336260+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163ZJ803696z7JqGk4Yzy4F ENCSR000BJC https://www.encodeproject.org/experiments/ENCSR000BJC transcription factor NR3C1-human Ishikawa immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF527JSO https://www.encodeproject.org/files/ENCFF527JSO/@@download/ENCFF527JSO.bam ENCFF788WDL https://www.encodeproject.org/files/ENCFF788WDL/@@download/ENCFF788WDL.bam 43.0 M 0 21.6 M 0.502 SE 36 36 native 0.0 M 15.7 M 12.1 M 0.281 0.77 0.76 3.93 90 1.36 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/3e6f5af6-6d0c-4f09-8422-aae39dbfb1f8/@@download/cross_correlation_plot/ENCFF000NNF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQA richard-myers:SL1088 ENCFF000NNF Illumina Genome Analyzer IIx 2016-12-11T01:13:00.942434+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163ZX803695Kj1j8qPQgkX1 ENCSR000BLB https://www.encodeproject.org/experiments/ENCSR000BLB transcription factor NR3C1-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF942JER https://www.encodeproject.org/files/ENCFF942JER/@@download/ENCFF942JER.bam ENCFF566HYM https://www.encodeproject.org/files/ENCFF566HYM/@@download/ENCFF566HYM.bam 23.6 M 0 18.0 M 0.763 SE 36 36 native 0.0 M 12.7 M 12.1 M 0.510 0.95 0.95 18.23 110 1.05 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/20cd491e-c179-4aa0-b324-9a86a0b468f9/@@download/cross_correlation_plot/ENCFF000NNM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDV richard-myers:SL1035 ENCFF000NNM Illumina Genome Analyzer IIx 2016-12-12T17:17:18.150593+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F161zk803697vfpg2qKbyZ3J ENCSR000BLB https://www.encodeproject.org/experiments/ENCSR000BLB transcription factor NR3C1-human Ishikawa immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF428QRM https://www.encodeproject.org/files/ENCFF428QRM/@@download/ENCFF428QRM.bam ENCFF298AEN https://www.encodeproject.org/files/ENCFF298AEN/@@download/ENCFF298AEN.bam 40.5 M 0 20.1 M 0.497 SE 36 36 native 0.0 M 14.7 M 12.4 M 0.306 0.84 0.84 5.89 95 1.12 2.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ea43d77-a5e4-4162-96df-aa5db14e5b0d/@@download/cross_correlation_plot/ENCFF000NNN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWC richard-myers:SL1087 ENCFF000NNN Illumina Genome Analyzer IIx 2016-12-12T17:17:27.844378+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F161zxQ03693JQ1ZJ95zxG35 ENCSR000BKI https://www.encodeproject.org/experiments/ENCSR000BKI transcription factor POLR2A-human Ishikawa immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF631EDC https://www.encodeproject.org/files/ENCFF631EDC/@@download/ENCFF631EDC.bam ENCFF891QWY https://www.encodeproject.org/files/ENCFF891QWY/@@download/ENCFF891QWY.bam 18.5 M 0 16.4 M 0.887 SE 36 36 native 0.0 M 12.7 M 12.3 M 0.664 0.96 0.97 34.58 115 1.53 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/630dd6eb-6298-4063-8cd8-25c70b0130d2/@@download/cross_correlation_plot/ENCFF000NOW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJV richard-myers:SL1176 ENCFF000NOW Illumina Genome Analyzer IIx 2016-12-10T20:44:25.233621+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162x3Q0369Bxb30J6x5bZ2k ENCSR000BKI https://www.encodeproject.org/experiments/ENCSR000BKI transcription factor POLR2A-human Ishikawa immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF387CSW https://www.encodeproject.org/files/ENCFF387CSW/@@download/ENCFF387CSW.bam ENCFF341KQG https://www.encodeproject.org/files/ENCFF341KQG/@@download/ENCFF341KQG.bam 29.0 M 0 24.3 M 0.838 SE 36 36 native 0.0 M 17.9 M 16.3 M 0.561 0.91 0.93 16.25 110 2.10 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/eec99d56-f72f-4011-9bcd-e2ceb33fc862/@@download/cross_correlation_plot/ENCFF000NPB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYD richard-myers:SL2085 ENCFF000NPB Illumina Genome Analyzer IIx 2016-12-10T20:50:58.647761+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162x8803699Z3Y8493qbp46 ENCSR000BTU https://www.encodeproject.org/experiments/ENCSR000BTU transcription factor RAD21-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BUU https://www.encodeproject.org/experiments/ENCSR000BUU "transcription factor,chromatin remodeller" REST-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BTD https://www.encodeproject.org/experiments/ENCSR000BTD transcription factor SRF-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BTO https://www.encodeproject.org/experiments/ENCSR000BTO transcription factor TAF1-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BUV https://www.encodeproject.org/experiments/ENCSR000BUV transcription factor TCF12-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BSW https://www.encodeproject.org/experiments/ENCSR000BSW transcription factor TEAD4-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BSX https://www.encodeproject.org/experiments/ENCSR000BSX transcription factor USF1-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BSY https://www.encodeproject.org/experiments/ENCSR000BSY transcription factor YY1-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BSZ https://www.encodeproject.org/experiments/ENCSR000BSZ transcription factor ZBTB7A-human Ishikawa immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BNU https://www.encodeproject.org/experiments/ENCSR000BNU transcription factor ATF3-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF308RGN https://www.encodeproject.org/files/ENCFF308RGN/@@download/ENCFF308RGN.bam ENCFF005MDO https://www.encodeproject.org/files/ENCFF005MDO/@@download/ENCFF005MDO.bam 37.5 M 0 34.0 M 0.905 SE 36 36 native 0.0 M 24.1 M 22.4 M 0.597 0.93 0.93 15.44 95 1.19 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/8c2fa2ef-67a3-4417-b821-890b58e3a46b/@@download/cross_correlation_plot/ENCFF000PWC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNH richard-myers:SL3184 ENCFF000PWC Illumina Genome Analyzer IIx 2016-12-11T01:00:22.388359+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163YJQ03699Z3Y8493qbpxb ENCSR000BNU https://www.encodeproject.org/experiments/ENCSR000BNU transcription factor ATF3-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF438DHS https://www.encodeproject.org/files/ENCFF438DHS/@@download/ENCFF438DHS.bam ENCFF917RFP https://www.encodeproject.org/files/ENCFF917RFP/@@download/ENCFF917RFP.bam 30.3 M 0 27.6 M 0.908 SE 36 36 native 0.0 M 21.1 M 15.4 M 0.506 0.73 0.73 3.46 120 1.35 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/86570045-d324-48f6-a132-8277fda3e67b/@@download/cross_correlation_plot/ENCFF000PWA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNG richard-myers:SL3926 ENCFF000PWA Illumina Genome Analyzer IIx 2016-12-11T00:45:24.211063+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163YXQ03699Z3Y8493qbpxy ENCSR000BKH https://www.encodeproject.org/experiments/ENCSR000BKH "RNA binding protein,transcription factor" BCLAF1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF339YBR https://www.encodeproject.org/files/ENCFF339YBR/@@download/ENCFF339YBR.bam ENCFF096ONF https://www.encodeproject.org/files/ENCFF096ONF/@@download/ENCFF096ONF.bam 22.7 M 0 17.9 M 0.790 SE 76 36 36 0.0 M 12.7 M 11.7 M 0.517 0.92 0.92 12.52 135 1.09 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/6a8cbc98-3c78-41ee-bd93-952251622460/@@download/cross_correlation_plot/ENCFF000PWX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUN richard-myers:SL1273 ENCFF000PWX Illumina Genome Analyzer IIx 2017-01-07T06:31:30.452424+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1j7PJQ0369B98XXFPXj669b ENCSR000BKH https://www.encodeproject.org/experiments/ENCSR000BKH "RNA binding protein,transcription factor" BCLAF1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF554KEG https://www.encodeproject.org/files/ENCFF554KEG/@@download/ENCFF554KEG.bam ENCFF944QTZ https://www.encodeproject.org/files/ENCFF944QTZ/@@download/ENCFF944QTZ.bam 19.2 M 0 17.4 M 0.907 SE 36 36 36 0.0 M 13.3 M 11.1 M 0.580 0.84 0.83 5.55 145 1.14 2.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/879c6bd9-b412-4a7d-a680-5c0fa217cb53/@@download/cross_correlation_plot/ENCFF000PWM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFE richard-myers:SL1512 ENCFF000PWM Illumina Genome Analyzer IIx 2017-01-07T06:25:37.164888+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1j7PXQ0369Gy3543YZ1jP18 ENCSR948QLZ https://www.encodeproject.org/experiments/ENCSR948QLZ transcription factor CBX1-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF382DBE https://www.encodeproject.org/files/ENCFF382DBE/@@download/ENCFF382DBE.bam ENCFF758UNJ https://www.encodeproject.org/files/ENCFF758UNJ/@@download/ENCFF758UNJ.bam 30.1 M 0 28.8 M 0.959 SE 50 50 native 0.0 M 21.9 M 21.4 M 0.712 0.98 0.98 59.71 85 1.08 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/8735fcb1-557d-4fc3-91e3-2850cf40b02d/@@download/cross_correlation_plot/ENCFF665CXV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB916OLW richard-myers:SL65224 ENCFF665CXV HiSeq 2000 2016-10-09T17:02:36.080507+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Gpj0jv1fvz446Zf2J5y8 ENCSR948QLZ https://www.encodeproject.org/experiments/ENCSR948QLZ transcription factor CBX1-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF888AOR https://www.encodeproject.org/files/ENCFF888AOR/@@download/ENCFF888AOR.bam ENCFF971UIQ https://www.encodeproject.org/files/ENCFF971UIQ/@@download/ENCFF971UIQ.bam 23.6 M 0 22.8 M 0.968 SE 50 50 native 0.0 M 18.3 M 16.4 M 0.694 0.90 0.90 10.31 110 1.07 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/ae3f7124-7e7a-4157-91bf-09570c8d3777/@@download/cross_correlation_plot/ENCFF946BAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB212MWS richard-myers:SL39530 ENCFF946BAN HiSeq 2000 2016-10-09T17:02:43.862756+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6Gvj0jv1fvz446Zf2J5yQ ENCSR000BRT https://www.encodeproject.org/experiments/ENCSR000BRT "transcription factor,chromatin remodeller,RNA binding protein" CBX3-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF289RGM https://www.encodeproject.org/files/ENCFF289RGM/@@download/ENCFF289RGM.bam ENCFF971ILL https://www.encodeproject.org/files/ENCFF971ILL/@@download/ENCFF971ILL.bam 48.8 M 0 42.6 M 0.872 SE 36 36 native 0.0 M 31.4 M 30.4 M 0.622 0.98 0.98 43.13 100 1.14 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/d5b18507-291a-4477-b862-29b33a87a993/@@download/cross_correlation_plot/ENCFF000PXA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JAW richard-myers:SL7105 ENCFF000PXA Illumina Genome Analyzer IIx 2016-12-10T20:13:23.886618+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Kj803692yykb1zBpz7Q8 ENCSR000BRT https://www.encodeproject.org/experiments/ENCSR000BRT "transcription factor,chromatin remodeller,RNA binding protein" CBX3-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF093QMN https://www.encodeproject.org/files/ENCFF093QMN/@@download/ENCFF093QMN.bam ENCFF607PEE https://www.encodeproject.org/files/ENCFF607PEE/@@download/ENCFF607PEE.bam 46.2 M 0 38.8 M 0.840 SE 36 36 native 0.0 M 27.7 M 27.0 M 0.585 0.98 0.98 54.51 95 1.06 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a28678e-c195-4571-af25-4c9e72b83748/@@download/cross_correlation_plot/ENCFF000PXB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZB richard-myers:SL7568 ENCFF000PXB Illumina Genome Analyzer IIx 2016-12-10T20:04:06.038632+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162KxQ0369GF0YB1zjPf6J3 ENCSR272JAT https://www.encodeproject.org/experiments/ENCSR272JAT "transcription factor,chromatin remodeller" CBX5-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF468LGZ https://www.encodeproject.org/files/ENCFF468LGZ/@@download/ENCFF468LGZ.bam ENCFF532CRC https://www.encodeproject.org/files/ENCFF532CRC/@@download/ENCFF532CRC.bam 24.8 M 0 23.5 M 0.947 SE 50 50 native 0.0 M 18.8 M 18.5 M 0.745 0.99 0.99 82.77 75 1.05 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf917158-7575-4c7c-947a-785c71b8aaa1/@@download/cross_correlation_plot/ENCFF002BEY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB751ZID richard-myers:SL35071 ENCFF002BEY HiSeq 2000 2016-10-09T16:54:22.605170+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv47780jv1xPyfX78Yz4j2v ENCSR272JAT https://www.encodeproject.org/experiments/ENCSR272JAT "transcription factor,chromatin remodeller" CBX5-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF092TPD https://www.encodeproject.org/files/ENCFF092TPD/@@download/ENCFF092TPD.bam ENCFF259XFT https://www.encodeproject.org/files/ENCFF259XFT/@@download/ENCFF259XFT.bam 32.1 M 0 31.3 M 0.975 SE 50 50 native 0.0 M 25.0 M 24.4 M 0.759 0.98 0.98 48.78 85 1.05 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd582c1c-df11-4426-810e-587d2d9d63b7/@@download/cross_correlation_plot/ENCFF002BEZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB215JXP richard-myers:SL41791 ENCFF002BEZ HiSeq 2000 2016-10-09T16:54:30.342847+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv478j0jv1QxJBfj5Zb2pkG ENCSR000BRQ https://www.encodeproject.org/experiments/ENCSR000BRQ transcription factor CEBPB-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF314OQP https://www.encodeproject.org/files/ENCFF314OQP/@@download/ENCFF314OQP.bam ENCFF706JAK https://www.encodeproject.org/files/ENCFF706JAK/@@download/ENCFF706JAK.bam 41.7 M 0 36.8 M 0.882 SE 36 36 native 0.0 M 28.1 M 25.6 M 0.614 0.93 0.94 17.75 115 1.21 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/66fa89f3-6346-479a-bb65-ec8926324193/@@download/cross_correlation_plot/ENCFF000PXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXK richard-myers:SL8085 ENCFF000PXH Illumina Genome Analyzer IIx 2016-12-11T02:49:00.604682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163vG0036933PVVJ7Qq01Pg ENCSR000BRQ https://www.encodeproject.org/experiments/ENCSR000BRQ transcription factor CEBPB-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF154YTN https://www.encodeproject.org/files/ENCFF154YTN/@@download/ENCFF154YTN.bam ENCFF873KUV https://www.encodeproject.org/files/ENCFF873KUV/@@download/ENCFF873KUV.bam 7.2 M 0 6.6 M 0.918 SE 36 36 native 0.0 M 5.0 M 4.9 M 0.680 0.98 0.98 70.92 105 1.66 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/96cc397b-6d6b-4302-bdbc-3556b96d4caa/@@download/cross_correlation_plot/ENCFF000PXC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHZ richard-myers:SL9547 ENCFF000PXC Illumina Genome Analyzer IIx 2016-12-11T01:17:39.038895+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163vQQ03695zJkyP3F892Kp ENCSR000BVY https://www.encodeproject.org/experiments/ENCSR000BVY transcription factor CEBPD-human K562 immortalized cell line richard-myers ENCODE2 pending SE "50,36" "Illumina Genome Analyzer IIx,HiSeq 2000" unreviewed ENCSR000BGG https://www.encodeproject.org/experiments/ENCSR000BGG control Control-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF812TGW https://www.encodeproject.org/files/ENCFF812TGW/@@download/ENCFF812TGW.bam ENCFF927ARR https://www.encodeproject.org/files/ENCFF927ARR/@@download/ENCFF927ARR.bam 14.6 M 0 11.7 M 0.804 SE 36 native 0.0 M 8.4 M 8.0 M 0.550 0.97 0.97 28.75 105 1.03 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1d9290d-92a5-4c6b-b31a-e3902f6e85cd/@@download/cross_correlation_plot/ENCFF000QFL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEW richard-myers:SL519 ENCFF000QFL Illumina Genome Analyzer IIx 2016-08-05T20:36:10.397406+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVyFG8036985Bx4K9zQZ3Gf ENCSR000BGG https://www.encodeproject.org/experiments/ENCSR000BGG control Control-human K562 immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF913HVS https://www.encodeproject.org/files/ENCFF913HVS/@@download/ENCFF913HVS.bam ENCFF836HYK https://www.encodeproject.org/files/ENCFF836HYK/@@download/ENCFF836HYK.bam 46.4 M 0 29.6 M 0.639 SE 36 36 native 0.0 M 20.2 M 19.4 M 0.419 0.97 0.97 36.18 105 1.02 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/008176c2-3ec8-414f-b12f-8babd0aadb51/@@download/cross_correlation_plot/ENCFF000QET.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KES richard-myers:SL1396 ENCFF000QET Illumina Genome Analyzer IIx 2016-08-05T20:37:38.678182+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVyFP803692QxPxQ9zV3P3K ENCSR000BGG https://www.encodeproject.org/experiments/ENCSR000BGG control Control-human K562 immortalized cell line 4 richard-myers ENCODE2 GRCh38 ENCFF234NVU https://www.encodeproject.org/files/ENCFF234NVU/@@download/ENCFF234NVU.bam ENCFF878FCD https://www.encodeproject.org/files/ENCFF878FCD/@@download/ENCFF878FCD.bam 37.8 M 0 26.6 M 0.704 SE 36 36 native 0.0 M 18.5 M 17.2 M 0.454 0.93 0.93 14.88 110 1.02 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/665146b9-3aa4-4d98-a2d6-9e16b84c1750/@@download/cross_correlation_plot/ENCFF000QEU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEX richard-myers:SL1397 ENCFF000QEU Illumina Genome Analyzer IIx 2016-08-05T20:37:07.295063+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByVyFV803693KkJyybGgQgP4 ENCSR000BLJ https://www.encodeproject.org/experiments/ENCSR000BLJ control Control-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF772PJM https://www.encodeproject.org/files/ENCFF772PJM/@@download/ENCFF772PJM.bam ENCFF418AYM https://www.encodeproject.org/files/ENCFF418AYM/@@download/ENCFF418AYM.bam 15.6 M 0 14.1 M 0.904 SE 36 36 native 0.0 M 10.6 M 8.5 M 0.546 0.82 0.81 5.04 120 1.13 6.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a3b0a12-e8b0-45d7-91e5-a883e24836d0/@@download/cross_correlation_plot/ENCFF000QEX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTE richard-myers:SL2455 ENCFF000QEX Illumina Genome Analyzer IIx 2016-10-26T17:35:42.524540+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082XbQ0369Bj2bF0JP9JJv5 ENCSR000BLJ https://www.encodeproject.org/experiments/ENCSR000BLJ control Control-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF982BHL https://www.encodeproject.org/files/ENCFF982BHL/@@download/ENCFF982BHL.bam ENCFF031NXU https://www.encodeproject.org/files/ENCFF031NXU/@@download/ENCFF031NXU.bam 21.8 M 0 20.9 M 0.957 SE 36 36 native 0.0 M 16.2 M 15.6 M 0.715 0.97 0.97 39.08 125 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/95440234-8104-4abe-b945-34489d5e4a25/@@download/cross_correlation_plot/ENCFF000QEZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTF richard-myers:SL3980 ENCFF000QEZ Illumina Genome Analyzer IIx 2016-10-26T17:35:51.954346+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Xp80369J2Pxk91P1yF9V ENCSR000BRJ https://www.encodeproject.org/experiments/ENCSR000BRJ control Control-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF836OEO https://www.encodeproject.org/files/ENCFF836OEO/@@download/ENCFF836OEO.bam ENCFF979RYH https://www.encodeproject.org/files/ENCFF979RYH/@@download/ENCFF979RYH.bam 62.1 M 0 50.3 M 0.810 SE 36 36 native 0.0 M 37.7 M 36.8 M 0.593 0.99 0.99 107.04 105 1.02 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/f73f4206-6966-4f81-8454-d40e9ef79eb5/@@download/cross_correlation_plot/ENCFF000QFG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRW richard-myers:SL6023 ENCFF000QFG Illumina Genome Analyzer IIx 2016-10-09T17:03:52.640861+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv65100jv1v69xp00g4J2XP ENCSR000BRJ https://www.encodeproject.org/experiments/ENCSR000BRJ control Control-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF533FQH https://www.encodeproject.org/files/ENCFF533FQH/@@download/ENCFF533FQH.bam ENCFF312LXY https://www.encodeproject.org/files/ENCFF312LXY/@@download/ENCFF312LXY.bam 49.6 M 0 41.8 M 0.843 SE 36 36 native 0.0 M 28.3 M 27.3 M 0.550 0.98 0.99 83.08 125 1.02 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e4fd9a2-c0c7-4264-9fa8-1298c25ffeb5/@@download/cross_correlation_plot/ENCFF000QFJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJR richard-myers:SL9103 ENCFF000QFJ Illumina Genome Analyzer IIx 2016-10-09T17:02:43.222024+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv65380jv1x3KYJK9kQ04fP ENCSR000BRJ https://www.encodeproject.org/experiments/ENCSR000BRJ control Control-human K562 immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF304AZH https://www.encodeproject.org/files/ENCFF304AZH/@@download/ENCFF304AZH.bam ENCFF879QVR https://www.encodeproject.org/files/ENCFF879QVR/@@download/ENCFF879QVR.bam 27.3 M 0 25.6 M 0.938 SE 50 50 native 0.0 M 21.4 M 21.0 M 0.767 0.99 0.99 140.26 95 1.01 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/337c3e47-f7cf-4416-bd61-a6da4667081b/@@download/cross_correlation_plot/ENCFF000QFI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSF richard-myers:SL11659 ENCFF000QFI HiSeq 2000 2016-10-09T17:02:29.247420+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv655Q0jv1XpBpGXQxqxYKP ENCSR000BRJ https://www.encodeproject.org/experiments/ENCSR000BRJ control Control-human K562 immortalized cell line 4 richard-myers ENCODE2 GRCh38 ENCFF984QXA https://www.encodeproject.org/files/ENCFF984QXA/@@download/ENCFF984QXA.bam ENCFF555KFK https://www.encodeproject.org/files/ENCFF555KFK/@@download/ENCFF555KFK.bam 37.8 M 0 36.5 M 0.965 SE 50 50 native 0.0 M 30.0 M 29.2 M 0.772 0.99 0.99 121.36 85 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/337f287a-3d0f-455d-b07e-090f131420ce/@@download/cross_correlation_plot/ENCFF000QFK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJS richard-myers:SL12793 ENCFF000QFK HiSeq 2000 2016-10-09T17:02:40.304105+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv657j0jv1YFyQ90J3z9yZ7 ENCSR000FCA https://www.encodeproject.org/experiments/ENCSR000FCA control Control-human K562 immortalized cell line 13 richard-myers ENCODE3 GRCh38 ENCFF332SVJ https://www.encodeproject.org/files/ENCFF332SVJ/@@download/ENCFF332SVJ.bam ENCFF929JAP https://www.encodeproject.org/files/ENCFF929JAP/@@download/ENCFF929JAP.bam 72.3 M 0 65.5 M 0.906 SE 50 50 None 0.0 M 52.9 M 49.8 M 0.689 0.96 0.96 26.17 80 1.03 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2c39f36-cd46-4bb9-818b-668439bd2a11/@@download/cross_correlation_plot/ENCFF001RVO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAN richard-myers:SL34968 ENCFF001RVO HiSeq 2000 2016-05-06T18:17:10.145210+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq4VQ036929FJGg42Xq1bb ENCSR129NAJ https://www.encodeproject.org/experiments/ENCSR129NAJ control Control-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF213VVQ https://www.encodeproject.org/files/ENCFF213VVQ/@@download/ENCFF213VVQ.bam ENCFF611SZR https://www.encodeproject.org/files/ENCFF611SZR/@@download/ENCFF611SZR.bam 34.1 M 0 33.3 M 0.975 SE 50 50 None 0.0 M 27.0 M 26.3 M 0.771 0.99 0.99 74.89 70 1.02 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/0f6e26f0-ddee-49d8-be56-20d37bd2d122/@@download/cross_correlation_plot/ENCFF774EJH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB263WLY richard-myers:SL68156 ENCFF774EJH HiSeq 2000 2016-05-06T18:15:26.874259+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq6f00369GXx3gz82ZfkGz ENCSR264VDP https://www.encodeproject.org/experiments/ENCSR264VDP control Control-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF092PMQ https://www.encodeproject.org/files/ENCFF092PMQ/@@download/ENCFF092PMQ.bam ENCFF057EMC https://www.encodeproject.org/files/ENCFF057EMC/@@download/ENCFF057EMC.bam 42.6 M 0 41.6 M 0.976 SE 50 50 None 0.0 M 33.8 M 32.9 M 0.772 0.98 0.99 67.33 85 1.03 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/fc408d82-b412-40f8-9462-a542d5903327/@@download/cross_correlation_plot/ENCFF993VKM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB503MAE richard-myers:SL68155 ENCFF993VKM HiSeq 2000 2016-05-06T18:14:44.960088+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq9yQ03692Fy2Pk02vGV9J ENCSR571CEX https://www.encodeproject.org/experiments/ENCSR571CEX control Control-human K562 immortalized cell line 11 richard-myers ENCODE3 GRCh38 ENCFF968UFH https://www.encodeproject.org/files/ENCFF968UFH/@@download/ENCFF968UFH.bam ENCFF996WHT https://www.encodeproject.org/files/ENCFF996WHT/@@download/ENCFF996WHT.bam 60.4 M 0 55.8 M 0.924 SE 50 50 None 0.0 M 42.8 M 40.6 M 0.673 0.98 0.98 43.11 100 1.05 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed8ba95f-420a-4e64-a732-ae4cf5e94d1e/@@download/cross_correlation_plot/ENCFF536LRX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB962DFW richard-myers:SL30828 ENCFF536LRX HiSeq 2000 2016-05-06T18:11:48.873495+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqPq80369GkFPvq42zg1fJ ENCSR599SPN https://www.encodeproject.org/experiments/ENCSR599SPN control Control-human K562 immortalized cell line 14 richard-myers ENCODE3 GRCh38 ENCFF709XAA https://www.encodeproject.org/files/ENCFF709XAA/@@download/ENCFF709XAA.bam ENCFF018BCR https://www.encodeproject.org/files/ENCFF018BCR/@@download/ENCFF018BCR.bam 51.5 M 0 49.4 M 0.959 SE 50 50 None 0.0 M 40.7 M 39.7 M 0.770 0.99 0.99 88.57 65 1.02 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/91e733bf-aadb-486b-acc1-53e4990d1792/@@download/cross_correlation_plot/ENCFF002BGC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB171QVK richard-myers:SL41843 ENCFF002BGC HiSeq 2000 2016-05-06T18:10:44.705511+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQQ803690j2jgp42pQ31p ENCSR700IEB https://www.encodeproject.org/experiments/ENCSR700IEB control Control-human K562 immortalized cell line 15 richard-myers ENCODE3 GRCh38 ENCFF162ZOO https://www.encodeproject.org/files/ENCFF162ZOO/@@download/ENCFF162ZOO.bam ENCFF292LYW https://www.encodeproject.org/files/ENCFF292LYW/@@download/ENCFF292LYW.bam 57.7 M 0 56.0 M 0.971 SE 50 50 None 0.0 M 45.4 M 44.0 M 0.763 0.98 0.98 51.49 70 1.02 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/192c1e88-a6a0-4558-b110-f1a382d19bc0/@@download/cross_correlation_plot/ENCFF913JVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB987AGN richard-myers:SL57459 ENCFF913JVQ HiSeq 2000 2016-05-06T18:08:54.066392+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqXKQ03691Q4QQpZ2q8BjB ENCSR824WND https://www.encodeproject.org/experiments/ENCSR824WND control Control-human K562 immortalized cell line 12 richard-myers ENCODE3 GRCh38 ENCFF121DUE https://www.encodeproject.org/files/ENCFF121DUE/@@download/ENCFF121DUE.bam ENCFF338DYR https://www.encodeproject.org/files/ENCFF338DYR/@@download/ENCFF338DYR.bam 66.7 M 0 65.0 M 0.974 SE 50 50 None 0.0 M 53.3 M 51.1 M 0.766 0.98 0.98 45.98 75 1.02 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/c992d17a-f1f3-42c4-93ed-b9c7ec94ece7/@@download/cross_correlation_plot/ENCFF001RVP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAL richard-myers:SL34356 ENCFF001RVP HiSeq 2000 2016-05-06T18:05:51.166737+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqf3Q036961GyjjQ2QP8qQ ENCSR830KKO https://www.encodeproject.org/experiments/ENCSR830KKO control Control-human K562 immortalized cell line 12 richard-myers ENCODE3 GRCh38 ENCFF204GLJ https://www.encodeproject.org/files/ENCFF204GLJ/@@download/ENCFF204GLJ.bam ENCFF302OPH https://www.encodeproject.org/files/ENCFF302OPH/@@download/ENCFF302OPH.bam 54.0 M 0 51.1 M 0.947 SE 50 50 None 0.0 M 40.5 M 38.5 M 0.714 0.98 0.98 52.78 90 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/b00749e8-0af7-4f39-8bb0-d2864ce07ea1/@@download/cross_correlation_plot/ENCFF001RVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAM richard-myers:SL30829 ENCFF001RVN HiSeq 2000 2016-05-06T18:06:36.688580+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqfKj03690j2jgp42pQ36Z ENCSR896JFO https://www.encodeproject.org/experiments/ENCSR896JFO control Control-human K562 immortalized cell line 5 richard-myers ENCODE3 GRCh38 ENCFF505ZUJ https://www.encodeproject.org/files/ENCFF505ZUJ/@@download/ENCFF505ZUJ.bam ENCFF675HPK https://www.encodeproject.org/files/ENCFF675HPK/@@download/ENCFF675HPK.bam 64.5 M 0 59.2 M 0.918 SE 50 50 None 0.0 M 46.2 M 44.6 M 0.691 0.98 0.98 45.26 75 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/b8cf50e4-2d76-43c5-bf1d-d94d00037be3/@@download/cross_correlation_plot/ENCFF001RVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAO richard-myers:SL30827 ENCFF001RVQ HiSeq 2000 2016-05-06T18:04:22.972385+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqgz8036961GyjjQ2QP8xV ENCSR962APM https://www.encodeproject.org/experiments/ENCSR962APM control Control-human K562 immortalized cell line 14 richard-myers ENCODE3 GRCh38 ENCFF063BAN https://www.encodeproject.org/files/ENCFF063BAN/@@download/ENCFF063BAN.bam ENCFF912CYX https://www.encodeproject.org/files/ENCFF912CYX/@@download/ENCFF912CYX.bam 64.5 M 0 62.8 M 0.972 SE 50 50 None 0.0 M 51.0 M 49.1 M 0.760 0.98 0.98 43.66 85 1.02 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/7b797028-faca-4762-9ffe-35209ada776b/@@download/cross_correlation_plot/ENCFF400XMH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB663FAC richard-myers:SL57458 ENCFF400XMH HiSeq 2000 2016-05-06T18:05:48.538670+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqkBj0369PPK4xgv2b79gZ ENCSR996HUG https://www.encodeproject.org/experiments/ENCSR996HUG control Control-human K562 immortalized cell line 13 richard-myers ENCODE3 GRCh38 ENCFF285EWB https://www.encodeproject.org/files/ENCFF285EWB/@@download/ENCFF285EWB.bam ENCFF588EWX https://www.encodeproject.org/files/ENCFF588EWX/@@download/ENCFF588EWX.bam 44.6 M 0 42.9 M 0.961 SE 50 50 native 0.0 M 34.5 M 33.6 M 0.754 0.99 0.99 69.49 75 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/765567de-3334-4b54-a8ea-790db7180636/@@download/cross_correlation_plot/ENCFF002BGB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB241HGY richard-myers:SL41842 ENCFF002BGB HiSeq 2000 2016-10-29T18:05:00.237258+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F09xzVj0jv1xg5PX69583gg9 ENCSR996HUG https://www.encodeproject.org/experiments/ENCSR996HUG control Control-human K562 immortalized cell line 13 richard-myers ENCODE3 GRCh38 ENCFF696ZGZ https://www.encodeproject.org/files/ENCFF696ZGZ/@@download/ENCFF696ZGZ.bam ENCFF588EWX https://www.encodeproject.org/files/ENCFF588EWX/@@download/ENCFF588EWX.bam 44.6 M 0 42.9 M 0.961 SE 50 None 0.0 M 34.5 M 33.6 M 0.754 0.99 0.99 69.49 70 1.03 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ecf56aa-31bd-4ea6-bc9e-9664b5607db4/@@download/cross_correlation_plot/ENCFF002BGB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB241HGY richard-myers:SL41842 ENCFF002BGB HiSeq 2000 2016-05-05T17:05:48.130418+00:00 released pipeline completed https://platform.dnanexus.com/projects/BKp5K980bpZZ096Xp1XQ02fZ/monitor/analysis/BvGb9b80bpZvz9XV5Z6Px6bP ENCSR000BSO https://www.encodeproject.org/experiments/ENCSR000BSO transcription factor CREB1-human K562 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR077DKV https://www.encodeproject.org/experiments/ENCSR077DKV transcription factor CREM-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF473NMO https://www.encodeproject.org/files/ENCFF473NMO/@@download/ENCFF473NMO.bam ENCFF578BYK https://www.encodeproject.org/files/ENCFF578BYK/@@download/ENCFF578BYK.bam 34.6 M 0 32.1 M 0.928 SE 50 50 native 0.0 M 26.7 M 24.7 M 0.716 0.94 0.96 35.96 95 1.48 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/9940cc28-c660-4f09-a294-5d2bf937cfe5/@@download/cross_correlation_plot/ENCFF281EIK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB704OVG richard-myers:SL35069 ENCFF281EIK HiSeq 2000 2016-10-26T16:28:23.089395+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzX00369BqVfYq19ZB8PY ENCSR077DKV https://www.encodeproject.org/experiments/ENCSR077DKV transcription factor CREM-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF363YKW https://www.encodeproject.org/files/ENCFF363YKW/@@download/ENCFF363YKW.bam ENCFF358BPA https://www.encodeproject.org/files/ENCFF358BPA/@@download/ENCFF358BPA.bam 24.3 M 0 23.3 M 0.962 SE 50 50 native 0.0 M 19.3 M 17.7 M 0.729 0.93 0.95 27.49 90 1.69 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9c35efe-9bdc-421a-8af9-172b4b20cec6/@@download/cross_correlation_plot/ENCFF183QKB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB542MZH richard-myers:SL41792 ENCFF183QKB HiSeq 2000 2016-10-26T16:27:50.973910+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzbj0369GJ6xQfbB7Bjqz ENCSR000BPJ https://www.encodeproject.org/experiments/ENCSR000BPJ "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF391HFU https://www.encodeproject.org/files/ENCFF391HFU/@@download/ENCFF391HFU.bam ENCFF108YVY https://www.encodeproject.org/files/ENCFF108YVY/@@download/ENCFF108YVY.bam 24.6 M 0 19.1 M 0.775 SE 36 36 None 0.0 M 14.3 M 8.0 M 0.325 0.56 0.58 2.26 120 4.89 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/faade081-06ed-4809-9337-27c383109329/@@download/cross_correlation_plot/ENCFF000PYD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSW richard-myers:SL3075 ENCFF000PYD Illumina Genome Analyzer IIx 2016-07-28T00:32:00.065929+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYZbj03697GbqkgJGPb7p1 ENCSR000BPJ https://www.encodeproject.org/experiments/ENCSR000BPJ "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF691BQZ https://www.encodeproject.org/files/ENCFF691BQZ/@@download/ENCFF691BQZ.bam ENCFF552MDV https://www.encodeproject.org/files/ENCFF552MDV/@@download/ENCFF552MDV.bam 31.3 M 0 27.7 M 0.883 SE 36 36 None 0.0 M 21.2 M 15.9 M 0.507 0.76 0.80 4.98 115 1.94 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8cdae2d-4ec8-4099-b1b3-a241b74ad671/@@download/cross_correlation_plot/ENCFF000PYJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFB richard-myers:SL5605 ENCFF000PYJ Illumina Genome Analyzer IIx 2016-07-28T00:32:04.290825+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYZj80369JXG9qpJGPbJ1G ENCSR000BNK https://www.encodeproject.org/experiments/ENCSR000BNK transcription factor CTCFL-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF454MMY https://www.encodeproject.org/files/ENCFF454MMY/@@download/ENCFF454MMY.bam ENCFF674NLR https://www.encodeproject.org/files/ENCFF674NLR/@@download/ENCFF674NLR.bam 21.1 M 0 18.2 M 0.863 SE 36 36 native 0.0 M 13.1 M 4.6 M 0.219 0.35 0.27 1.06 95 1.70 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/d255f4dc-87e2-485e-9d5d-fcd0e4055e6c/@@download/cross_correlation_plot/ENCFF000PYP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPW richard-myers:SL3189 ENCFF000PYP Illumina Genome Analyzer IIx 2016-12-10T20:34:38.327613+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162yP00369Bxb30J6x5bZ3K ENCSR000BNK https://www.encodeproject.org/experiments/ENCSR000BNK transcription factor CTCFL-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF310MOR https://www.encodeproject.org/files/ENCFF310MOR/@@download/ENCFF310MOR.bam ENCFF186CHS https://www.encodeproject.org/files/ENCFF186CHS/@@download/ENCFF186CHS.bam 25.3 M 0 20.8 M 0.821 SE 36 36 native 0.0 M 15.5 M 9.2 M 0.365 0.60 0.56 2.02 90 1.56 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/2764b56c-dd9f-4518-9326-ac7c98323964/@@download/cross_correlation_plot/ENCFF000PYR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPV richard-myers:SL3972 ENCFF000PYR Illumina Genome Analyzer IIx 2016-12-10T20:44:15.802431+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162yZQ03692pJ09J76g5fky ENCSR387SYS https://www.encodeproject.org/experiments/ENCSR387SYS transcription factor DEAF1-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF056XVW https://www.encodeproject.org/files/ENCFF056XVW/@@download/ENCFF056XVW.bam ENCFF989NDR https://www.encodeproject.org/files/ENCFF989NDR/@@download/ENCFF989NDR.bam 22.4 M 0 21.4 M 0.957 SE 50 50 native 0.0 M 17.5 M 16.5 M 0.736 0.95 0.95 19.82 130 1.06 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/f47dfb86-7405-4985-a9ba-c7498605e6a5/@@download/cross_correlation_plot/ENCFF095DPD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB843UCX richard-myers:SL61383 ENCFF095DPD HiSeq 2000 2016-10-26T16:27:47.284106+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzq0036923z1QYVBPkppP ENCSR387SYS https://www.encodeproject.org/experiments/ENCSR387SYS transcription factor DEAF1-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF540SXT https://www.encodeproject.org/files/ENCFF540SXT/@@download/ENCFF540SXT.bam ENCFF320BMV https://www.encodeproject.org/files/ENCFF320BMV/@@download/ENCFF320BMV.bam 32.5 M 0 31.3 M 0.963 SE 50 50 native 0.0 M 26.0 M 24.7 M 0.758 0.95 0.96 23.60 110 1.05 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/38e2eda8-850b-4ea4-8ee5-5b56a44bd9f6/@@download/cross_correlation_plot/ENCFF087LWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB703NTK richard-myers:SL75630 ENCFF087LWV HiSeq 2000 2016-10-26T16:28:00.250884+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F07zzyj03694q32PPxBJ66zX ENCSR000BLI https://www.encodeproject.org/experiments/ENCSR000BLI transcription factor E2F6-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF823GCX https://www.encodeproject.org/files/ENCFF823GCX/@@download/ENCFF823GCX.bam ENCFF551QGI https://www.encodeproject.org/files/ENCFF551QGI/@@download/ENCFF551QGI.bam 41.3 M 0 21.0 M 0.509 SE 36 36 native 0.0 M 15.7 M 6.8 M 0.165 0.44 0.42 1.73 95 1.65 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/4853ab17-1844-4072-8625-e8bb364f8b87/@@download/cross_correlation_plot/ENCFF000PYZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHF richard-myers:SL2948 ENCFF000PYZ Illumina Genome Analyzer IIx 2016-12-12T17:17:28.600651+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F161zQ803692pJ09J76g5fYf ENCSR000BLI https://www.encodeproject.org/experiments/ENCSR000BLI transcription factor E2F6-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF827SLL https://www.encodeproject.org/files/ENCFF827SLL/@@download/ENCFF827SLL.bam ENCFF665PGG https://www.encodeproject.org/files/ENCFF665PGG/@@download/ENCFF665PGG.bam 33.1 M 0 24.5 M 0.741 SE 36 36 native 0.0 M 18.2 M 11.7 M 0.352 0.64 0.65 2.75 90 3.14 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/c332991e-38c0-46cc-ab66-693ccce1cbe7/@@download/cross_correlation_plot/ENCFF000PYX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGX richard-myers:SL3073 ENCFF000PYX Illumina Genome Analyzer IIx 2016-12-12T17:17:33.361140+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F161zZQ03697K4B1J71pxzJ9 ENCSR000BNE https://www.encodeproject.org/experiments/ENCSR000BNE transcription factor EGR1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF645IYJ https://www.encodeproject.org/files/ENCFF645IYJ/@@download/ENCFF645IYJ.bam ENCFF083SFE https://www.encodeproject.org/files/ENCFF083SFE/@@download/ENCFF083SFE.bam 28.5 M 0 25.3 M 0.890 SE 36 36 native 0.0 M 19.4 M 12.4 M 0.435 0.64 0.64 2.64 110 2.51 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/19f14588-9c2d-4ba0-9a53-d6efefdddd4f/@@download/cross_correlation_plot/ENCFF000PZK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWW richard-myers:SL3164 ENCFF000PZK Illumina Genome Analyzer IIx 2016-12-11T04:09:57.416794+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165GX00369BgG8x1ygv1XJJ ENCSR000BNE https://www.encodeproject.org/experiments/ENCSR000BNE transcription factor EGR1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF021CMK https://www.encodeproject.org/files/ENCFF021CMK/@@download/ENCFF021CMK.bam ENCFF148LZI https://www.encodeproject.org/files/ENCFF148LZI/@@download/ENCFF148LZI.bam 42.1 M 0 37.6 M 0.893 SE 36 36 native 0.0 M 28.4 M 24.6 M 0.584 0.87 0.87 7.91 100 1.38 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/9729a028-a09b-4720-8c2f-5563d964768e/@@download/cross_correlation_plot/ENCFF000PZP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWY richard-myers:SL3497 ENCFF000PZP Illumina Genome Analyzer IIx 2016-12-11T04:25:47.239156+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165Gfj03697yz601ypVJ3Zj ENCSR000BMD https://www.encodeproject.org/experiments/ENCSR000BMD transcription factor ELF1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF331TRC https://www.encodeproject.org/files/ENCFF331TRC/@@download/ENCFF331TRC.bam ENCFF236BRO https://www.encodeproject.org/files/ENCFF236BRO/@@download/ENCFF236BRO.bam 17.5 M 0 12.6 M 0.717 SE 36 36 native 0.0 M 9.9 M 4.8 M 0.272 0.48 0.47 1.81 125 4.87 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/c585f126-99c6-49e9-b9b2-4bb5fa21a6c2/@@download/cross_correlation_plot/ENCFF000PZV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBW richard-myers:SL2950 ENCFF000PZV Illumina Genome Analyzer IIx 2016-12-10T20:35:01.158987+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162p60036993F1b953B4Pz5 ENCSR000BMD https://www.encodeproject.org/experiments/ENCSR000BMD transcription factor ELF1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF535PLW https://www.encodeproject.org/files/ENCFF535PLW/@@download/ENCFF535PLW.bam ENCFF174XBV https://www.encodeproject.org/files/ENCFF174XBV/@@download/ENCFF174XBV.bam 34.4 M 0 30.3 M 0.882 SE 36 36 native 0.0 M 22.6 M 19.1 M 0.556 0.85 0.86 7.72 120 1.69 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ff32a22-d4d6-4fb8-af7b-141fe0860406/@@download/cross_correlation_plot/ENCFF000PZY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIV richard-myers:SL3360 ENCFF000PZY Illumina Genome Analyzer IIx 2016-12-10T20:55:06.089186+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162pF0036969X0jJ6p3ffVP ENCSR000BKQ https://www.encodeproject.org/experiments/ENCSR000BKQ transcription factor ETS1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF401KIO https://www.encodeproject.org/files/ENCFF401KIO/@@download/ENCFF401KIO.bam ENCFF906ZOM https://www.encodeproject.org/files/ENCFF906ZOM/@@download/ENCFF906ZOM.bam 22.1 M 0 19.7 M 0.890 SE 36 36 native 0.0 M 14.0 M 12.2 M 0.551 0.88 0.88 7.82 135 1.15 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/56f14ca6-b515-4bcf-b4d7-e2b359242ac7/@@download/cross_correlation_plot/ENCFF000QAD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGI richard-myers:SL2262 ENCFF000QAD Illumina Genome Analyzer IIx 2016-12-10T20:55:51.311991+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1634x803692pJ09J76g5fvP ENCSR000BKQ https://www.encodeproject.org/experiments/ENCSR000BKQ transcription factor ETS1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF398SXO https://www.encodeproject.org/files/ENCFF398SXO/@@download/ENCFF398SXO.bam ENCFF639FFA https://www.encodeproject.org/files/ENCFF639FFA/@@download/ENCFF639FFA.bam 29.2 M 0 24.2 M 0.831 SE 36 36 native 0.0 M 17.1 M 14.5 M 0.496 0.85 0.84 6.15 105 1.19 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/dee1f46e-f66c-4978-9b0d-0d411923b335/@@download/cross_correlation_plot/ENCFF000QAG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGJ richard-myers:SL3182 ENCFF000QAG Illumina Genome Analyzer IIx 2016-12-10T21:17:24.354371+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163528036969X0jJ6p3ffYG ENCSR000FCE https://www.encodeproject.org/experiments/ENCSR000FCE transcription factor ETV6-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF002FHN https://www.encodeproject.org/files/ENCFF002FHN/@@download/ENCFF002FHN.bam ENCFF515KNP https://www.encodeproject.org/files/ENCFF515KNP/@@download/ENCFF515KNP.bam 24.6 M 0 23.5 M 0.953 SE 50 50 native 0.0 M 19.7 M 17.8 M 0.723 0.92 0.92 11.91 130 1.05 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/17ae9a83-fc9e-45b3-8718-07ccc94644b2/@@download/cross_correlation_plot/ENCFF001RUK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAG richard-myers:SL31984 ENCFF001RUK HiSeq 2000 2016-10-09T17:02:46.199065+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b1FJj0369PyvFZjj61GJK0 ENCSR000FCE https://www.encodeproject.org/experiments/ENCSR000FCE transcription factor ETV6-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF836NST https://www.encodeproject.org/files/ENCFF836NST/@@download/ENCFF836NST.bam ENCFF905HXC https://www.encodeproject.org/files/ENCFF905HXC/@@download/ENCFF905HXC.bam 26.2 M 0 23.9 M 0.915 SE 50 50 native 0.0 M 19.1 M 18.6 M 0.712 0.98 0.98 47.62 90 1.08 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/0802cdf5-7d4a-4a0b-beb0-8a48fc73428e/@@download/cross_correlation_plot/ENCFF696VXH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAH richard-myers:SL35075 ENCFF696VXH HiSeq 2000 2016-11-01T15:32:08.792139+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0b1FXQ0369FZF23QQ0jZpZG ENCSR159OCC https://www.encodeproject.org/experiments/ENCSR159OCC "recombinant protein,transcription factor" FLAG-ATF1-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF780DBH https://www.encodeproject.org/files/ENCFF780DBH/@@download/ENCFF780DBH.bam ENCFF485ERR https://www.encodeproject.org/files/ENCFF485ERR/@@download/ENCFF485ERR.bam 38.5 M 0 37.1 M 0.962 SE 50 50 native 0.0 M 30.0 M 29.5 M 0.764 0.98 0.98 66.72 80 1.03 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab1bbe32-0b19-4e65-a52e-5ad9de150762/@@download/cross_correlation_plot/ENCFF444VXB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB076XWH richard-myers:SL126199 ENCFF444VXB HiSeq 2000 2016-10-09T16:59:58.372557+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Y880jv1xPyfX78Yz4jJZ ENCSR159OCC https://www.encodeproject.org/experiments/ENCSR159OCC "recombinant protein,transcription factor" FLAG-ATF1-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF515YFJ https://www.encodeproject.org/files/ENCFF515YFJ/@@download/ENCFF515YFJ.bam ENCFF120BPS https://www.encodeproject.org/files/ENCFF120BPS/@@download/ENCFF120BPS.bam 26.4 M 0 25.3 M 0.960 SE 50 50 native 0.0 M 20.7 M 20.3 M 0.768 0.98 0.98 58.53 80 1.05 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4541337-40e2-4c00-bd66-70162949bf43/@@download/cross_correlation_plot/ENCFF148LLM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB933PVT richard-myers:SL126200 ENCFF148LLM HiSeq 2000 2016-10-09T16:59:39.896957+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Y9j0jv1XYYX2Fxk3f5Yq ENCSR633EIC https://www.encodeproject.org/experiments/ENCSR633EIC "transcription factor,recombinant protein" FLAG-PBX2-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF030XLK https://www.encodeproject.org/files/ENCFF030XLK/@@download/ENCFF030XLK.bam ENCFF933PZQ https://www.encodeproject.org/files/ENCFF933PZQ/@@download/ENCFF933PZQ.bam 35.5 M 0 34.3 M 0.967 SE 50 50 native 0.0 M 27.8 M 27.3 M 0.769 0.98 0.99 68.66 90 1.03 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/dcdf5537-f5dc-4fc4-9841-385fa623a0f6/@@download/cross_correlation_plot/ENCFF253ROA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB825IHB richard-myers:SL126205 ENCFF253ROA HiSeq 2000 2016-10-09T16:59:52.512347+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4G980jv1f60PxyZ9JGPG4 ENCSR633EIC https://www.encodeproject.org/experiments/ENCSR633EIC "transcription factor,recombinant protein" FLAG-PBX2-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF072SKI https://www.encodeproject.org/files/ENCFF072SKI/@@download/ENCFF072SKI.bam ENCFF100EJJ https://www.encodeproject.org/files/ENCFF100EJJ/@@download/ENCFF100EJJ.bam 22.9 M 0 21.9 M 0.958 SE 50 50 native 0.0 M 17.9 M 17.4 M 0.761 0.98 0.98 43.29 105 1.04 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/1ea495f6-4fcd-4aa6-8e9d-2d0918ad1502/@@download/cross_correlation_plot/ENCFF526NYU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB631SCB richard-myers:SL126206 ENCFF526NYU HiSeq 2000 2016-10-09T16:59:03.262019+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4GBj0jv1g5yGjfvVx0P6x ENCSR000BMV https://www.encodeproject.org/experiments/ENCSR000BMV transcription factor FOSL1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF561ILM https://www.encodeproject.org/files/ENCFF561ILM/@@download/ENCFF561ILM.bam ENCFF658FMT https://www.encodeproject.org/files/ENCFF658FMT/@@download/ENCFF658FMT.bam 27.1 M 0 21.6 M 0.797 SE 36 36 native 0.0 M 15.6 M 10.5 M 0.387 0.68 0.65 2.63 140 1.31 3.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/698060b4-364a-4774-8786-d4adc14aaa60/@@download/cross_correlation_plot/ENCFF000QAL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDH richard-myers:SL2349 ENCFF000QAL Illumina Genome Analyzer IIx 2016-12-10T20:37:44.446086+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162bVj03699Z3Y8493qbp2V ENCSR000BMV https://www.encodeproject.org/experiments/ENCSR000BMV transcription factor FOSL1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF492NUF https://www.encodeproject.org/files/ENCFF492NUF/@@download/ENCFF492NUF.bam ENCFF805FJI https://www.encodeproject.org/files/ENCFF805FJI/@@download/ENCFF805FJI.bam 29.8 M 0 26.9 M 0.903 SE 36 36 native 0.0 M 19.7 M 12.7 M 0.426 0.65 0.62 2.38 115 1.19 2.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/76af96b9-9f1a-48b3-a9f8-dce2c8a6b5ea/@@download/cross_correlation_plot/ENCFF000QAN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDU richard-myers:SL3187 ENCFF000QAN Illumina Genome Analyzer IIx 2016-12-10T20:35:17.555185+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162bj003699K237J9jY9kY0 ENCSR000BLO https://www.encodeproject.org/experiments/ENCSR000BLO transcription factor GABPA-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF902IUF https://www.encodeproject.org/files/ENCFF902IUF/@@download/ENCFF902IUF.bam ENCFF351CRO https://www.encodeproject.org/files/ENCFF351CRO/@@download/ENCFF351CRO.bam 17.2 M 0 13.3 M 0.777 SE 36 36 native 0.0 M 10.3 M 7.8 M 0.453 0.76 0.78 4.66 115 2.68 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/d44aaa55-726a-4b05-97f2-25cdc7b754a0/@@download/cross_correlation_plot/ENCFF000QAQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEO richard-myers:SL2943 ENCFF000QAQ Illumina Genome Analyzer IIx 2016-12-11T04:16:13.176368+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165bJj0369KQ3Yk1yz1kgpX ENCSR000BLO https://www.encodeproject.org/experiments/ENCSR000BLO transcription factor GABPA-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF603XOJ https://www.encodeproject.org/files/ENCFF603XOJ/@@download/ENCFF603XOJ.bam ENCFF073NRB https://www.encodeproject.org/files/ENCFF073NRB/@@download/ENCFF073NRB.bam 27.1 M 0 22.0 M 0.812 SE 36 36 native 0.0 M 16.5 M 6.2 M 0.229 0.38 0.38 1.39 150 5.53 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/90763ec4-7707-44ec-b3a7-f50adf3b1368/@@download/cross_correlation_plot/ENCFF000QAV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUD richard-myers:SL3356 ENCFF000QAV Illumina Genome Analyzer IIx 2016-12-11T04:23:51.252570+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165bXj0369GF0YB1zjPf712 ENCSR000BKM https://www.encodeproject.org/experiments/ENCSR000BKM transcription factor GATA2-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF828HPM https://www.encodeproject.org/files/ENCFF828HPM/@@download/ENCFF828HPM.bam ENCFF541TGX https://www.encodeproject.org/files/ENCFF541TGX/@@download/ENCFF541TGX.bam 32.7 M 0 29.4 M 0.898 SE 36 36 native 0.0 M 22.7 M 19.6 M 0.599 0.87 0.87 7.91 115 1.42 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3fab05e-3bbc-4fab-a4e2-4ee192eaa3b3/@@download/cross_correlation_plot/ENCFF000QBD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPX richard-myers:SL1430 ENCFF000QBD Illumina Genome Analyzer IIx 2016-12-11T04:56:48.011349+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1666g80369KbxV61z4GFvv9 ENCSR000BKM https://www.encodeproject.org/experiments/ENCSR000BKM transcription factor GATA2-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF257ZRY https://www.encodeproject.org/files/ENCFF257ZRY/@@download/ENCFF257ZRY.bam ENCFF414LJV https://www.encodeproject.org/files/ENCFF414LJV/@@download/ENCFF414LJV.bam 31.8 M 0 27.7 M 0.869 SE 36 36 native 0.0 M 20.3 M 16.2 M 0.507 0.80 0.79 4.44 115 1.18 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d8863a0-f028-45cb-9397-ada75a7f2c30/@@download/cross_correlation_plot/ENCFF000QBC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOX richard-myers:SL1665 ENCFF000QBC Illumina Genome Analyzer IIx 2016-12-11T04:55:24.219400+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1666v00369KbxV61z4GFvvX ENCSR000BMG https://www.encodeproject.org/experiments/ENCSR000BMG "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF089JIC https://www.encodeproject.org/files/ENCFF089JIC/@@download/ENCFF089JIC.bam ENCFF051OWD https://www.encodeproject.org/files/ENCFF051OWD/@@download/ENCFF051OWD.bam 16.5 M 0 14.1 M 0.855 SE 36 36 native 0.0 M 10.1 M 5.0 M 0.301 0.49 0.44 1.52 110 1.45 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/90ddcf33-4151-4c9d-a247-d7488bf12a7e/@@download/cross_correlation_plot/ENCFF000QBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCR richard-myers:SL2952 ENCFF000QBF Illumina Genome Analyzer IIx 2016-12-11T04:07:50.416846+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165J7Q0369BgG8x1ygv1XK1 ENCSR000BMG https://www.encodeproject.org/experiments/ENCSR000BMG "transcription factor,chromatin remodeller" HDAC2-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF445ONF https://www.encodeproject.org/files/ENCFF445ONF/@@download/ENCFF445ONF.bam ENCFF329KMX https://www.encodeproject.org/files/ENCFF329KMX/@@download/ENCFF329KMX.bam 43.8 M 0 37.8 M 0.862 SE 36 36 native 0.0 M 26.8 M 21.9 M 0.500 0.82 0.81 5.13 120 1.10 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/047e6360-3ead-4fcb-a3b4-3663b9142b88/@@download/cross_correlation_plot/ENCFF000QBN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCS richard-myers:SL3359 ENCFF000QBN Illumina Genome Analyzer IIx 2016-12-11T04:26:26.174589+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165JGQ03697yz601ypVJ3b4 ENCSR757IIU https://www.encodeproject.org/experiments/ENCSR757IIU transcription factor HMBOX1-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF797FVU https://www.encodeproject.org/files/ENCFF797FVU/@@download/ENCFF797FVU.bam ENCFF475TEH https://www.encodeproject.org/files/ENCFF475TEH/@@download/ENCFF475TEH.bam 29.7 M 0 28.5 M 0.960 SE 50 50 native 0.0 M 23.2 M 21.7 M 0.731 0.94 0.95 20.28 140 1.29 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/9126b124-ff30-474c-9f5e-e7826baa8de3/@@download/cross_correlation_plot/ENCFF705WBN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB923AMS richard-myers:SL61590 ENCFF705WBN HiSeq 2000 2016-10-09T17:01:41.775973+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08005Q0369FFbbzvx9jvvGk ENCSR757IIU https://www.encodeproject.org/experiments/ENCSR757IIU transcription factor HMBOX1-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF202BLM https://www.encodeproject.org/files/ENCFF202BLM/@@download/ENCFF202BLM.bam ENCFF671VUD https://www.encodeproject.org/files/ENCFF671VUD/@@download/ENCFF671VUD.bam 28.4 M 0 27.3 M 0.962 SE 50 50 native 0.0 M 22.7 M 21.5 M 0.757 0.95 0.96 23.09 150 1.14 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/0112e6c2-8b2f-4ac9-82ad-85c33183caea/@@download/cross_correlation_plot/ENCFF049PKJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB511FVM richard-myers:SL75637 ENCFF049PKJ HiSeq 2000 2016-11-14T17:56:05.254074+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0GJqjj03690YG174ZkjvBP2 ENCSR795IYP https://www.encodeproject.org/experiments/ENCSR795IYP transcription factor JUNB-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF512YJL https://www.encodeproject.org/files/ENCFF512YJL/@@download/ENCFF512YJL.bam ENCFF610YQQ https://www.encodeproject.org/files/ENCFF610YQQ/@@download/ENCFF610YQQ.bam 29.5 M 0 28.3 M 0.962 SE 50 50 native 0.0 M 23.4 M 22.6 M 0.768 0.97 0.97 39.80 80 1.05 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/3a28a886-a8fd-4cc2-83a1-e1cbd1b3c63b/@@download/cross_correlation_plot/ENCFF100SGJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB251AFN richard-myers:SL39537 ENCFF100SGJ HiSeq 2000 2016-10-09T17:06:31.235975+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pf00jv1f60PxyZ9JGKqx ENCSR795IYP https://www.encodeproject.org/experiments/ENCSR795IYP transcription factor JUNB-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF090SFR https://www.encodeproject.org/files/ENCFF090SFR/@@download/ENCFF090SFR.bam ENCFF921PES https://www.encodeproject.org/files/ENCFF921PES/@@download/ENCFF921PES.bam 22.7 M 0 20.8 M 0.913 SE 50 50 native 0.0 M 16.9 M 16.3 M 0.718 0.97 0.98 42.13 100 1.05 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/382d9892-e270-491a-859f-db1e086fc266/@@download/cross_correlation_plot/ENCFF821MJN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB079DEF richard-myers:SL65268 ENCFF821MJN HiSeq 2000 2016-10-09T17:06:48.323429+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3pgQ0jv1g5yGjfvVx0Kfj ENCSR642VZY https://www.encodeproject.org/experiments/ENCSR642VZY transcription factor KDM4B-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF066TDG https://www.encodeproject.org/files/ENCFF066TDG/@@download/ENCFF066TDG.bam ENCFF620QZO https://www.encodeproject.org/files/ENCFF620QZO/@@download/ENCFF620QZO.bam 23.2 M 0 20.3 M 0.876 SE 50 50 native 0.0 M 15.9 M 15.4 M 0.663 0.97 0.97 33.83 135 1.11 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/4b61b923-461f-47b7-bac1-70f83e8c34ce/@@download/cross_correlation_plot/ENCFF778YOV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB933EGX richard-myers:SL65252 ENCFF778YOV HiSeq 2000 2016-10-09T17:02:35.420521+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4KF00jv1XvFGkBjjfjQg1 ENCSR642VZY https://www.encodeproject.org/experiments/ENCSR642VZY transcription factor KDM4B-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF330ZVF https://www.encodeproject.org/files/ENCFF330ZVF/@@download/ENCFF330ZVF.bam ENCFF003TEQ https://www.encodeproject.org/files/ENCFF003TEQ/@@download/ENCFF003TEQ.bam 21.6 M 0 20.8 M 0.962 SE 50 50 native 0.0 M 16.8 M 16.5 M 0.766 0.99 0.99 79.19 75 1.05 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/98c7606c-04f0-4ed7-9a24-1a321e035196/@@download/cross_correlation_plot/ENCFF632EVH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB827EUW richard-myers:SL39538 ENCFF632EVH HiSeq 2000 2016-10-09T17:02:38.444846+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4KGj0jv1g5yGjfvVx0P8y ENCSR760UVO https://www.encodeproject.org/experiments/ENCSR760UVO transcription factor KLF16-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF408TSG https://www.encodeproject.org/files/ENCFF408TSG/@@download/ENCFF408TSG.bam ENCFF228FGR https://www.encodeproject.org/files/ENCFF228FGR/@@download/ENCFF228FGR.bam 29.5 M 0 28.2 M 0.955 SE 50 50 native 0.0 M 23.4 M 22.2 M 0.750 0.95 0.95 21.13 110 1.09 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/5a5f3bbb-0611-4793-967e-b5ba1a864099/@@download/cross_correlation_plot/ENCFF855OMG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB247QKE richard-myers:SL61612 ENCFF855OMG HiSeq 2000 2016-09-01T17:40:48.144575+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQV803692PkP0vj3Pyb75 ENCSR760UVO https://www.encodeproject.org/experiments/ENCSR760UVO transcription factor KLF16-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF749LRJ https://www.encodeproject.org/files/ENCFF749LRJ/@@download/ENCFF749LRJ.bam ENCFF640OUB https://www.encodeproject.org/files/ENCFF640OUB/@@download/ENCFF640OUB.bam 33.0 M 0 32.0 M 0.968 SE 50 50 native 0.0 M 26.4 M 24.9 M 0.755 0.95 0.95 21.30 120 1.09 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/6af33d2d-0aa7-4115-8e1f-9303b6332ebc/@@download/cross_correlation_plot/ENCFF545DFQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB803EMW richard-myers:SL70102 ENCFF545DFQ HiSeq 2000 2016-09-01T17:40:22.041763+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3VQZ00369B9J6bgQ3717Z4 ENCSR000BLP https://www.encodeproject.org/experiments/ENCSR000BLP transcription factor MAX-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF178VEA https://www.encodeproject.org/files/ENCFF178VEA/@@download/ENCFF178VEA.bam ENCFF393FKW https://www.encodeproject.org/files/ENCFF393FKW/@@download/ENCFF393FKW.bam 27.4 M 0 22.5 M 0.822 SE 36 36 native 0.0 M 16.5 M 11.3 M 0.412 0.68 0.67 2.92 100 2.14 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/db8899c5-e13d-4b57-ae3c-5b32ada1953c/@@download/cross_correlation_plot/ENCFF000QBZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVD richard-myers:SL2945 ENCFF000QBZ Illumina Genome Analyzer IIx 2016-12-11T04:27:55.526852+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165bjQ0369BV55708G9qbXy ENCSR000BLP https://www.encodeproject.org/experiments/ENCSR000BLP transcription factor MAX-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF797FEY https://www.encodeproject.org/files/ENCFF797FEY/@@download/ENCFF797FEY.bam ENCFF535RJW https://www.encodeproject.org/files/ENCFF535RJW/@@download/ENCFF535RJW.bam 40.6 M 0 36.3 M 0.894 SE 36 36 native 0.0 M 27.0 M 24.2 M 0.595 0.90 0.92 13.79 115 1.97 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f5ef045-1fde-4b04-bcdb-044faa1c2f84/@@download/cross_correlation_plot/ENCFF000QCC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXU richard-myers:SL3070 ENCFF000QCC Illumina Genome Analyzer IIx 2016-12-11T04:38:50.787069+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165bx80369F4yf5544b19P7 ENCSR221GAN https://www.encodeproject.org/experiments/ENCSR221GAN transcription factor MBD2-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF655OEX https://www.encodeproject.org/files/ENCFF655OEX/@@download/ENCFF655OEX.bam ENCFF665BZJ https://www.encodeproject.org/files/ENCFF665BZJ/@@download/ENCFF665BZJ.bam 29.1 M 0 28.0 M 0.962 SE 50 50 native 0.0 M 23.1 M 22.3 M 0.766 0.98 0.98 45.10 110 1.12 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a53e790-6740-4cd6-b131-c7fbb6dd20b6/@@download/cross_correlation_plot/ENCFF837CJW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB890KPJ richard-myers:SL45959 ENCFF837CJW HiSeq 2000 2016-10-09T17:00:50.678051+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43kj0jv1vY92b0GYjVFqf ENCSR221GAN https://www.encodeproject.org/experiments/ENCSR221GAN transcription factor MBD2-human K562 immortalized cell line 3 richard-myers ENCODE3 GRCh38 ENCFF502VUK https://www.encodeproject.org/files/ENCFF502VUK/@@download/ENCFF502VUK.bam ENCFF833BLL https://www.encodeproject.org/files/ENCFF833BLL/@@download/ENCFF833BLL.bam 24.7 M 0 23.9 M 0.968 SE 50 50 native 0.0 M 19.7 M 18.7 M 0.759 0.95 0.95 21.21 105 1.06 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/6353bd3a-4384-440b-8eac-970de749a16d/@@download/cross_correlation_plot/ENCFF945WVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB468RPJ richard-myers:SL44333 ENCFF945WVN HiSeq 2000 2016-10-09T17:00:07.689524+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv43q00jv1XYYX2Fxk3f51G ENCSR000BNV https://www.encodeproject.org/experiments/ENCSR000BNV transcription factor MEF2A-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF401BQM https://www.encodeproject.org/files/ENCFF401BQM/@@download/ENCFF401BQM.bam ENCFF913CDO https://www.encodeproject.org/files/ENCFF913CDO/@@download/ENCFF913CDO.bam 32.3 M 0 28.8 M 0.892 SE 36 36 native 0.0 M 21.9 M 18.3 M 0.568 0.84 0.83 5.79 120 1.12 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ca81c1a-ceaa-48a5-9f82-85263dd2c367/@@download/cross_correlation_plot/ENCFF000QCH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUF richard-myers:SL1794 ENCFF000QCH Illumina Genome Analyzer IIx 2016-12-10T20:54:17.064951+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162vK8036933PVVJ7Qq018X ENCSR000BNV https://www.encodeproject.org/experiments/ENCSR000BNV transcription factor MEF2A-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF850FRG https://www.encodeproject.org/files/ENCFF850FRG/@@download/ENCFF850FRG.bam ENCFF573SUC https://www.encodeproject.org/files/ENCFF573SUC/@@download/ENCFF573SUC.bam 29.5 M 0 26.4 M 0.896 SE 36 36 native 0.0 M 20.3 M 13.6 M 0.462 0.68 0.66 2.66 110 1.17 3.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9fba779-3d70-4efe-b04e-30012a918a60/@@download/cross_correlation_plot/ENCFF000QCI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVH richard-myers:SL3925 ENCFF000QCI Illumina Genome Analyzer IIx 2016-12-10T21:00:31.483816+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162vY803697K4B1J71pxzb6 ENCSR000FCB https://www.encodeproject.org/experiments/ENCSR000FCB transcription factor MITF-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF677BBS https://www.encodeproject.org/files/ENCFF677BBS/@@download/ENCFF677BBS.bam ENCFF735PTW https://www.encodeproject.org/files/ENCFF735PTW/@@download/ENCFF735PTW.bam 28.6 M 0 27.2 M 0.951 SE 50 50 native 0.0 M 22.1 M 21.2 M 0.741 0.97 0.97 37.45 95 1.04 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/82d11a4e-525c-4f8a-8e48-dbda05f424d5/@@download/cross_correlation_plot/ENCFF001RUI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAB richard-myers:SL34346 ENCFF001RUI HiSeq 2000 2016-10-09T17:09:58.538033+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3ykj0jv1f60PxyZ9JGP07 ENCSR000FCB https://www.encodeproject.org/experiments/ENCSR000FCB transcription factor MITF-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF983RUX https://www.encodeproject.org/files/ENCFF983RUX/@@download/ENCFF983RUX.bam ENCFF463AYG https://www.encodeproject.org/files/ENCFF463AYG/@@download/ENCFF463AYG.bam 27.6 M 0 25.1 M 0.910 SE 50 50 native 0.0 M 20.5 M 19.9 M 0.723 0.98 0.98 45.11 75 1.05 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/d7cf73ef-a64f-45dd-9a2d-8db41625ba86/@@download/cross_correlation_plot/ENCFF001RUH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAA richard-myers:SL35070 ENCFF001RUH HiSeq 2000 2016-10-09T17:10:22.298885+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3yq80jv1QxJBfj5Zb2pV5 ENCSR737LTZ https://www.encodeproject.org/experiments/ENCSR737LTZ transcription factor MYNN-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF179DZP https://www.encodeproject.org/files/ENCFF179DZP/@@download/ENCFF179DZP.bam ENCFF334LTA https://www.encodeproject.org/files/ENCFF334LTA/@@download/ENCFF334LTA.bam 25.3 M 0 24.5 M 0.969 SE 50 50 native 0.0 M 20.3 M 19.2 M 0.757 0.95 0.95 21.37 105 1.09 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/83e38833-e0d7-4fac-b971-90575d23b856/@@download/cross_correlation_plot/ENCFF142GQB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB517YYF richard-myers:SL44334 ENCFF142GQB HiSeq 2000 2016-10-09T17:01:49.771228+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66XQ0jv1q5825v91XY31V ENCSR737LTZ https://www.encodeproject.org/experiments/ENCSR737LTZ transcription factor MYNN-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF022IWG https://www.encodeproject.org/files/ENCFF022IWG/@@download/ENCFF022IWG.bam ENCFF542FVP https://www.encodeproject.org/files/ENCFF542FVP/@@download/ENCFF542FVP.bam 26.8 M 0 25.7 M 0.959 SE 50 50 native 0.0 M 21.3 M 20.7 M 0.771 0.97 0.98 46.56 105 1.13 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/01fe4025-1b70-4237-8a2a-292d598b3dea/@@download/cross_correlation_plot/ENCFF796BOA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB327PCS richard-myers:SL45969 ENCFF796BOA HiSeq 2000 2016-10-09T17:01:57.622852+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv66ZQ0jv1q5825v91XY31k ENCSR000FCC https://www.encodeproject.org/experiments/ENCSR000FCC transcription factor NFE2-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF187ZET https://www.encodeproject.org/files/ENCFF187ZET/@@download/ENCFF187ZET.bam ENCFF545NPE https://www.encodeproject.org/files/ENCFF545NPE/@@download/ENCFF545NPE.bam 33.2 M 0 31.8 M 0.957 SE 50 50 native 0.0 M 26.2 M 25.0 M 0.753 0.96 0.96 29.57 110 1.17 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/d4fcf4a2-04f7-4e8a-942e-4ead0eeac66e/@@download/cross_correlation_plot/ENCFF001RUN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAD richard-myers:SL34351 ENCFF001RUN HiSeq 2000 2016-10-09T17:01:58.636038+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41x80jv1XvFGkBjjfjQ7F ENCSR000FCC https://www.encodeproject.org/experiments/ENCSR000FCC transcription factor NFE2-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF198RTF https://www.encodeproject.org/files/ENCFF198RTF/@@download/ENCFF198RTF.bam ENCFF570ZZQ https://www.encodeproject.org/files/ENCFF570ZZQ/@@download/ENCFF570ZZQ.bam 25.0 M 0 23.5 M 0.939 SE 50 50 native 0.0 M 19.5 M 18.7 M 0.747 0.97 0.97 41.53 100 1.47 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/bc92bc11-feb5-48c8-bbc1-e3c77b98c508/@@download/cross_correlation_plot/ENCFF001RUJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAC richard-myers:SL35073 ENCFF001RUJ HiSeq 2000 2016-10-09T17:01:33.007141+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv41yj0jv1XvFGkBjjfjQ7Z ENCSR000BRS https://www.encodeproject.org/experiments/ENCSR000BRS transcription factor NR2F2-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF665EXC https://www.encodeproject.org/files/ENCFF665EXC/@@download/ENCFF665EXC.bam ENCFF214TVN https://www.encodeproject.org/files/ENCFF214TVN/@@download/ENCFF214TVN.bam 49.9 M 0 43.7 M 0.875 SE 36 36 native 0.0 M 32.3 M 30.5 M 0.611 0.96 0.96 28.75 105 1.16 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/37c7589e-e733-4bca-bce5-aa0f5e5ce3ce/@@download/cross_correlation_plot/ENCFF000QCS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEQ richard-myers:SL8143 ENCFF000QCS Illumina Genome Analyzer IIx 2016-12-11T01:12:09.942096+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163F6j03692yykb1zBpz7Xk ENCSR000BRS https://www.encodeproject.org/experiments/ENCSR000BRS transcription factor NR2F2-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF568RDF https://www.encodeproject.org/files/ENCFF568RDF/@@download/ENCFF568RDF.bam ENCFF546YUW https://www.encodeproject.org/files/ENCFF546YUW/@@download/ENCFF546YUW.bam 35.3 M 0 30.3 M 0.859 SE 36 36 native 0.0 M 22.3 M 17.2 M 0.487 0.81 0.81 5.21 140 1.15 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/4284d24e-c19f-489a-953a-32a83abca12b/@@download/cross_correlation_plot/ENCFF000QCR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXJ richard-myers:SL8577 ENCFF000QCR Illumina Genome Analyzer IIx 2016-12-10T22:55:26.138532+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163FFQ03692pJ09J76g5fyP ENCSR707QWA https://www.encodeproject.org/experiments/ENCSR707QWA transcription factor NR2F6-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF908MXL https://www.encodeproject.org/files/ENCFF908MXL/@@download/ENCFF908MXL.bam ENCFF173BBS https://www.encodeproject.org/files/ENCFF173BBS/@@download/ENCFF173BBS.bam 22.1 M 0 20.5 M 0.930 SE 50 50 native 0.0 M 17.0 M 15.8 M 0.718 0.94 0.94 15.99 140 1.08 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/461d43cc-26c4-4a45-8627-89a41e2858f5/@@download/cross_correlation_plot/ENCFF145XWH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB954HYL richard-myers:SL62310 ENCFF145XWH HiSeq 2000 2016-10-09T17:01:46.863017+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv482Q0jv1f60PxyZ9JGP7v ENCSR707QWA https://www.encodeproject.org/experiments/ENCSR707QWA transcription factor NR2F6-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF507UJN https://www.encodeproject.org/files/ENCFF507UJN/@@download/ENCFF507UJN.bam ENCFF127WCS https://www.encodeproject.org/files/ENCFF127WCS/@@download/ENCFF127WCS.bam 45.0 M 0 42.7 M 0.948 SE 50 50 native 0.0 M 35.7 M 32.1 M 0.714 0.91 0.91 11.75 130 1.13 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/60ef42fc-6c77-4100-a1c4-fe7f83ac0983/@@download/cross_correlation_plot/ENCFF976LPV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB222MGD richard-myers:SL75691 ENCFF976LPV HiSeq 2000 2016-10-09T17:02:00.738932+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv483j0jv1vY92b0GYjVFz6 ENCSR837EYC https://www.encodeproject.org/experiments/ENCSR837EYC transcription factor NRF1-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF207NLX https://www.encodeproject.org/files/ENCFF207NLX/@@download/ENCFF207NLX.bam ENCFF870HGG https://www.encodeproject.org/files/ENCFF870HGG/@@download/ENCFF870HGG.bam 24.0 M 0 22.7 M 0.945 SE 50 50 native 0.0 M 19.4 M 14.1 M 0.589 0.75 0.91 19.63 125 2.68 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/d6844fa0-6ac1-42a0-870f-365b5bd6c04f/@@download/cross_correlation_plot/ENCFF206ARZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB649UZW richard-myers:SL35473 ENCFF206ARZ HiSeq 2000 2016-10-09T16:59:57.110205+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49J00jv1XvFGkBjjfjQQq ENCSR837EYC https://www.encodeproject.org/experiments/ENCSR837EYC transcription factor NRF1-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF564KCD https://www.encodeproject.org/files/ENCFF564KCD/@@download/ENCFF564KCD.bam ENCFF185CRQ https://www.encodeproject.org/files/ENCFF185CRQ/@@download/ENCFF185CRQ.bam 22.4 M 0 21.7 M 0.971 SE 50 50 native 0.0 M 18.5 M 14.6 M 0.652 0.80 0.90 13.80 135 2.21 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/238b3bda-7d28-4ede-805a-eb83da8ed805/@@download/cross_correlation_plot/ENCFF252RBF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB502JAX richard-myers:SL44338 ENCFF252RBF HiSeq 2000 2016-10-09T16:59:55.525005+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv49K80jv1QxJBfj5Zb2pqB ENCSR000BQY https://www.encodeproject.org/experiments/ENCSR000BQY transcription factor PML-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF491DUD https://www.encodeproject.org/files/ENCFF491DUD/@@download/ENCFF491DUD.bam ENCFF271YAJ https://www.encodeproject.org/files/ENCFF271YAJ/@@download/ENCFF271YAJ.bam 31.0 M 0 28.3 M 0.912 SE 36 36 native 0.0 M 21.7 M 20.3 M 0.654 0.95 0.95 22.90 125 1.10 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/773f60d1-5675-4abb-a167-9fd763b38250/@@download/cross_correlation_plot/ENCFF000QDH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDA richard-myers:SL7894 ENCFF000QDH Illumina Genome Analyzer IIx 2016-12-11T03:37:02.964804+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164f5Q0369BgG8x1ygv1X5f ENCSR000BQY https://www.encodeproject.org/experiments/ENCSR000BQY transcription factor PML-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF112WHF https://www.encodeproject.org/files/ENCFF112WHF/@@download/ENCFF112WHF.bam ENCFF079DUY https://www.encodeproject.org/files/ENCFF079DUY/@@download/ENCFF079DUY.bam 40.9 M 0 29.6 M 0.724 SE 36 36 native 0.0 M 21.4 M 19.1 M 0.468 0.93 0.93 14.53 140 1.18 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/271c1de9-9c30-467a-9036-0a87b433ac86/@@download/cross_correlation_plot/ENCFF000QDJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDB richard-myers:SL8137 ENCFF000QDJ Illumina Genome Analyzer IIx 2016-12-11T03:50:28.323703+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164fB80369KbxV61z4GFvGb ENCSR000BMR https://www.encodeproject.org/experiments/ENCSR000BMR transcription factor POLR2A-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF569DZM https://www.encodeproject.org/files/ENCFF569DZM/@@download/ENCFF569DZM.bam ENCFF413ABF https://www.encodeproject.org/files/ENCFF413ABF/@@download/ENCFF413ABF.bam 37.2 M 0 34.4 M 0.924 SE 36 36 native 0.0 M 26.6 M 23.4 M 0.630 0.88 0.92 15.80 110 1.74 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b0ef9d8-d4aa-457a-ae3c-9e16e084ccf6/@@download/cross_correlation_plot/ENCFF000QDX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKQ richard-myers:SL3819 ENCFF000QDX Illumina Genome Analyzer IIx 2016-12-11T03:20:19.364201+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164J38036993F1b953B4Q3Q ENCSR000BMR https://www.encodeproject.org/experiments/ENCSR000BMR transcription factor POLR2A-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF140UJB https://www.encodeproject.org/files/ENCFF140UJB/@@download/ENCFF140UJB.bam ENCFF580SKM https://www.encodeproject.org/files/ENCFF580SKM/@@download/ENCFF580SKM.bam 37.2 M 0 32.3 M 0.870 SE 36 36 native 0.0 M 23.7 M 19.6 M 0.527 0.82 0.87 9.44 110 2.26 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/376b2a01-6d98-46cf-8693-f8d81fac8521/@@download/cross_correlation_plot/ENCFF000QDY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDZ richard-myers:SL3820 ENCFF000QDY Illumina Genome Analyzer IIx 2016-12-11T03:20:05.064047+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164J8003697vfpg2qKbyZVQ ENCSR000BKR https://www.encodeproject.org/experiments/ENCSR000BKR "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF037VJL https://www.encodeproject.org/files/ENCFF037VJL/@@download/ENCFF037VJL.bam ENCFF044YYE https://www.encodeproject.org/files/ENCFF044YYE/@@download/ENCFF044YYE.bam 13.5 M 0 11.5 M 0.855 SE 36 36 native 0.0 M 8.8 M 7.7 M 0.572 0.88 0.88 8.69 125 1.63 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/f03af22d-7c07-423a-bcae-86b596c5dbbd/@@download/cross_correlation_plot/ENCFF000QDG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZJ richard-myers:SL2939 ENCFF000QDG Illumina Genome Analyzer IIx 2016-12-11T04:27:13.049712+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165k2j03697k5jKB6pJ7v0V ENCSR000BKR https://www.encodeproject.org/experiments/ENCSR000BKR "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF115UJX https://www.encodeproject.org/files/ENCFF115UJX/@@download/ENCFF115UJX.bam ENCFF277YIL https://www.encodeproject.org/files/ENCFF277YIL/@@download/ENCFF277YIL.bam 32.7 M 0 27.4 M 0.838 SE 36 36 native 0.0 M 20.8 M 15.8 M 0.482 0.76 0.76 4.11 115 1.59 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb0faad5-71fd-4705-a4f5-1bfbc942f6c6/@@download/cross_correlation_plot/ENCFF000QDO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZG richard-myers:SL2940 ENCFF000QDO Illumina Genome Analyzer IIx 2016-12-11T04:38:32.127305+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165k7j0369PvYp91zK1PxbV ENCSR000BKV https://www.encodeproject.org/experiments/ENCSR000BKV transcription factor RAD21-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF796ZSJ https://www.encodeproject.org/files/ENCFF796ZSJ/@@download/ENCFF796ZSJ.bam ENCFF727JFN https://www.encodeproject.org/files/ENCFF727JFN/@@download/ENCFF727JFN.bam 32.6 M 0 17.6 M 0.540 SE 36 36 native 0.0 M 12.9 M 8.8 M 0.269 0.68 0.68 3.06 80 3.11 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/c682383a-2412-402f-a522-366020223d88/@@download/cross_correlation_plot/ENCFF000QEJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFW richard-myers:SL2947 ENCFF000QEJ Illumina Genome Analyzer IIx 2016-12-11T04:47:56.725754+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1664BQ03697yz601ypVJ3pP ENCSR000BKV https://www.encodeproject.org/experiments/ENCSR000BKV transcription factor RAD21-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF662PEC https://www.encodeproject.org/files/ENCFF662PEC/@@download/ENCFF662PEC.bam ENCFF780FVK https://www.encodeproject.org/files/ENCFF780FVK/@@download/ENCFF780FVK.bam 14.9 M 0 12.3 M 0.822 SE 36 36 native 0.0 M 9.3 M 7.8 M 0.522 0.84 0.85 6.87 95 4.07 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/aee24ced-5719-4720-8533-a9de23689e11/@@download/cross_correlation_plot/ENCFF000QEH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGQ richard-myers:SL3072 ENCFF000QEH Illumina Genome Analyzer IIx 2016-12-11T04:42:51.058741+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1664PQ0369KQ3Yk1yz1kgz4 ENCSR000BMW https://www.encodeproject.org/experiments/ENCSR000BMW "transcription factor,chromatin remodeller" REST-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF546IMN https://www.encodeproject.org/files/ENCFF546IMN/@@download/ENCFF546IMN.bam ENCFF905ENZ https://www.encodeproject.org/files/ENCFF905ENZ/@@download/ENCFF905ENZ.bam 32.5 M 0 28.1 M 0.863 SE 36 36 native 0.0 M 22.0 M 14.6 M 0.448 0.66 0.74 3.92 100 1.99 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/a032507f-e2a1-47fd-9c98-8ac25edc3a3c/@@download/cross_correlation_plot/ENCFF000QCX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBP richard-myers:SL3821 ENCFF000QCX Illumina Genome Analyzer IIx 2016-12-11T03:49:36.593931+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164gkQ03695Kj1j8qPQgkf5 ENCSR000BMW https://www.encodeproject.org/experiments/ENCSR000BMW "transcription factor,chromatin remodeller" REST-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF204TUQ https://www.encodeproject.org/files/ENCFF204TUQ/@@download/ENCFF204TUQ.bam ENCFF665LOG https://www.encodeproject.org/files/ENCFF665LOG/@@download/ENCFF665LOG.bam 30.5 M 0 17.9 M 0.588 SE 36 36 native 0.0 M 13.9 M 6.3 M 0.207 0.45 0.46 1.65 90 3.63 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/b2b5dc45-4d48-498f-af2e-9b63af6aa18c/@@download/cross_correlation_plot/ENCFF000QCW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBQ richard-myers:SL3822 ENCFF000QCW Illumina Genome Analyzer IIx 2016-12-11T03:34:22.898288+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164gy00369BJyPz9fb9qY3Z ENCSR076YPO https://www.encodeproject.org/experiments/ENCSR076YPO "transcription factor,chromatin remodeller" RNF2-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF544DDY https://www.encodeproject.org/files/ENCFF544DDY/@@download/ENCFF544DDY.bam ENCFF468FPM https://www.encodeproject.org/files/ENCFF468FPM/@@download/ENCFF468FPM.bam 31.2 M 0 29.5 M 0.946 SE 50 50 native 0.0 M 23.8 M 23.1 M 0.742 0.97 0.98 40.69 110 1.10 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/cc53d24a-3893-4122-b0ab-40d697cdea18/@@download/cross_correlation_plot/ENCFF232WOY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB272JTK richard-myers:SL65253 ENCFF232WOY HiSeq 2000 2016-10-09T17:34:17.862558+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Yj00jv1XvFGkBjjfjQqG ENCSR076YPO https://www.encodeproject.org/experiments/ENCSR076YPO "transcription factor,chromatin remodeller" RNF2-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF719XQY https://www.encodeproject.org/files/ENCFF719XQY/@@download/ENCFF719XQY.bam ENCFF877DYM https://www.encodeproject.org/files/ENCFF877DYM/@@download/ENCFF877DYM.bam 25.6 M 0 24.9 M 0.972 SE 50 50 native 0.0 M 20.7 M 19.9 M 0.778 0.97 0.97 35.30 135 1.07 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5d72253-46a9-46cc-a15d-a2dacf0072ef/@@download/cross_correlation_plot/ENCFF454EYI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB252OEO richard-myers:SL39979 ENCFF454EYI HiSeq 2000 2016-10-09T17:34:09.368184+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Yk80jv1zBYbxYJ5zzzbP ENCSR588AKU https://www.encodeproject.org/experiments/ENCSR588AKU transcription factor RUNX1-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF011XRF https://www.encodeproject.org/files/ENCFF011XRF/@@download/ENCFF011XRF.bam ENCFF497WWQ https://www.encodeproject.org/files/ENCFF497WWQ/@@download/ENCFF497WWQ.bam 22.9 M 0 22.1 M 0.968 SE 50 50 native 0.0 M 17.8 M 17.3 M 0.757 0.98 0.98 48.93 75 1.06 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd145837-5d2f-4957-a71a-beb48985d955/@@download/cross_correlation_plot/ENCFF644JIO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB145EIU richard-myers:SL41795 ENCFF644JIO HiSeq 2000 2016-10-09T17:00:03.546854+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4VkQ0jv1f60PxyZ9JGPQ9 ENCSR588AKU https://www.encodeproject.org/experiments/ENCSR588AKU transcription factor RUNX1-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF812KIP https://www.encodeproject.org/files/ENCFF812KIP/@@download/ENCFF812KIP.bam ENCFF280MYH https://www.encodeproject.org/files/ENCFF280MYH/@@download/ENCFF280MYH.bam 30.0 M 0 28.8 M 0.959 SE 50 50 native 0.0 M 22.7 M 21.9 M 0.728 0.97 0.97 32.32 110 1.07 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/343e7738-8ac0-4e98-950e-7b1029b519fe/@@download/cross_correlation_plot/ENCFF515YST.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB531YPQ richard-myers:SL43825 ENCFF515YST HiSeq 2000 2016-10-09T17:02:12.146576+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Vq00jv1g5yGjfvVx0PG9 ENCSR000BLR https://www.encodeproject.org/experiments/ENCSR000BLR transcription factor SIN3A-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF329LWM https://www.encodeproject.org/files/ENCFF329LWM/@@download/ENCFF329LWM.bam ENCFF669DGA https://www.encodeproject.org/files/ENCFF669DGA/@@download/ENCFF669DGA.bam 34.0 M 0 31.4 M 0.922 SE 36 36 native 0.0 M 23.6 M 16.8 M 0.494 0.71 0.69 3.02 100 1.15 3.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/717a5d5c-7c37-4ac2-a049-5a75132bf4dd/@@download/cross_correlation_plot/ENCFF000QFY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSX richard-myers:SL3273 ENCFF000QFY Illumina Genome Analyzer IIx 2016-12-10T21:09:14.723993+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16326j03698ZxQY8q63X80F ENCSR000BLR https://www.encodeproject.org/experiments/ENCSR000BLR transcription factor SIN3A-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF334QAB https://www.encodeproject.org/files/ENCFF334QAB/@@download/ENCFF334QAB.bam ENCFF466NDO https://www.encodeproject.org/files/ENCFF466NDO/@@download/ENCFF466NDO.bam 43.8 M 0 38.9 M 0.887 SE 36 36 native 0.0 M 29.2 M 21.4 M 0.489 0.74 0.73 3.42 95 1.19 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/3184bfd6-1b90-454c-8735-60985fc1d654/@@download/cross_correlation_plot/ENCFF000QGA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSK richard-myers:SL3496 ENCFF000QGA Illumina Genome Analyzer IIx 2016-12-10T21:31:02.976521+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1632Fj03697yz601ypVJ383 ENCSR000BGX https://www.encodeproject.org/experiments/ENCSR000BGX transcription factor SIX5-human K562 immortalized cell line richard-myers ENCODE2 pending SE 36 Illumina Genome Analyzer IIx unreviewed ENCSR000BNW https://www.encodeproject.org/experiments/ENCSR000BNW transcription factor SIX5-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF331BZT https://www.encodeproject.org/files/ENCFF331BZT/@@download/ENCFF331BZT.bam ENCFF975VMQ https://www.encodeproject.org/files/ENCFF975VMQ/@@download/ENCFF975VMQ.bam 30.1 M 0 27.9 M 0.927 SE 36 36 native 0.0 M 21.6 M 20.0 M 0.663 0.93 0.93 14.10 115 1.04 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb67302b-442a-40a2-a657-f192ea0db2ad/@@download/cross_correlation_plot/ENCFF000QGQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKN richard-myers:SL3924 ENCFF000QGQ Illumina Genome Analyzer IIx 2016-12-12T17:17:33.020661+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162330036933PVVJ7Qq012p ENCSR000BNW https://www.encodeproject.org/experiments/ENCSR000BNW transcription factor SIX5-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF584HKJ https://www.encodeproject.org/files/ENCFF584HKJ/@@download/ENCFF584HKJ.bam ENCFF447EAV https://www.encodeproject.org/files/ENCFF447EAV/@@download/ENCFF447EAV.bam 12.0 M 0 10.6 M 0.883 SE 36 36 native 0.0 M 8.0 M 5.7 M 0.475 0.71 0.70 3.13 110 2.08 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ce3ee70-5966-45fb-a59c-dcd33b5beaf8/@@download/cross_correlation_plot/ENCFF000QGN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKH richard-myers:SL3990 ENCFF000QGN Illumina Genome Analyzer IIx 2016-12-12T17:17:20.224960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16237803699Z3Y8493qbp0G ENCSR000FCD https://www.encodeproject.org/experiments/ENCSR000FCD transcription factor SMAD5-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF033UID https://www.encodeproject.org/files/ENCFF033UID/@@download/ENCFF033UID.bam ENCFF889IJX https://www.encodeproject.org/files/ENCFF889IJX/@@download/ENCFF889IJX.bam 30.1 M 0 29.1 M 0.970 SE 50 50 native 0.0 M 23.6 M 22.6 M 0.752 0.96 0.97 42.12 85 1.13 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/944d016a-94e5-4590-8813-3be5b28a56bc/@@download/cross_correlation_plot/ENCFF001RUL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAF richard-myers:SL31977 ENCFF001RUL HiSeq 2000 2016-10-09T17:35:01.119011+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Z2j0jv1XYYX2Fxk3f5Zb ENCSR000FCD https://www.encodeproject.org/experiments/ENCSR000FCD transcription factor SMAD5-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF412DRO https://www.encodeproject.org/files/ENCFF412DRO/@@download/ENCFF412DRO.bam ENCFF895SOZ https://www.encodeproject.org/files/ENCFF895SOZ/@@download/ENCFF895SOZ.bam 38.3 M 0 35.3 M 0.920 SE 50 50 native 0.0 M 28.3 M 26.5 M 0.690 0.94 0.96 28.29 80 1.29 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/c76d2398-dc24-4548-b906-28fb1c8d9194/@@download/cross_correlation_plot/ENCFF001RUM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB556AAE richard-myers:SL35067 ENCFF001RUM HiSeq 2000 2016-10-09T17:34:32.243298+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Z480jv1xPyfX78Yz4jKJ ENCSR000BKO https://www.encodeproject.org/experiments/ENCSR000BKO transcription factor SP1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF045AXI https://www.encodeproject.org/files/ENCFF045AXI/@@download/ENCFF045AXI.bam ENCFF700VDE https://www.encodeproject.org/files/ENCFF700VDE/@@download/ENCFF700VDE.bam 22.3 M 0 18.9 M 0.851 SE 36 36 native 0.0 M 14.2 M 12.7 M 0.571 0.90 0.90 9.36 120 1.09 2.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/29bf008a-e652-487a-8b52-6919f1d7dc69/@@download/cross_correlation_plot/ENCFF000QGV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLU richard-myers:SL1197 ENCFF000QGV Illumina Genome Analyzer IIx 2016-12-11T04:53:34.035666+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1669kj0369PJ8BP63qf1FqV ENCSR000BKO https://www.encodeproject.org/experiments/ENCSR000BKO transcription factor SP1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF595HJO https://www.encodeproject.org/files/ENCFF595HJO/@@download/ENCFF595HJO.bam ENCFF714DJL https://www.encodeproject.org/files/ENCFF714DJL/@@download/ENCFF714DJL.bam 25.8 M 0 23.3 M 0.903 SE 36 36 native 0.0 M 17.6 M 16.5 M 0.639 0.94 0.94 15.79 135 1.10 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/ffd83929-43c7-4b18-8a41-a51100244459/@@download/cross_correlation_plot/ENCFF000QGW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JLV richard-myers:SL1510 ENCFF000QGW Illumina Genome Analyzer IIx 2016-12-11T04:56:34.513322+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1669z00369KbxV61z4GFvyg ENCSR000BNL https://www.encodeproject.org/experiments/ENCSR000BNL transcription factor SP2-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF553GDL https://www.encodeproject.org/files/ENCFF553GDL/@@download/ENCFF553GDL.bam ENCFF558EIZ https://www.encodeproject.org/files/ENCFF558EIZ/@@download/ENCFF558EIZ.bam 12.9 M 0 9.9 M 0.773 SE 36 36 native 0.0 M 7.0 M 2.9 M 0.222 0.41 0.36 1.32 105 3.10 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/68bfffc7-cca7-4531-890e-c9a93c08931a/@@download/cross_correlation_plot/ENCFF000QGZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKW richard-myers:SL2951 ENCFF000QGZ Illumina Genome Analyzer IIx 2016-12-11T03:49:01.178477+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1652fj03692yykb1zBpz7pz ENCSR000BNL https://www.encodeproject.org/experiments/ENCSR000BNL transcription factor SP2-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF375CFX https://www.encodeproject.org/files/ENCFF375CFX/@@download/ENCFF375CFX.bam ENCFF496HGB https://www.encodeproject.org/files/ENCFF496HGB/@@download/ENCFF496HGB.bam 34.8 M 0 29.2 M 0.837 SE 36 36 native 0.0 M 20.6 M 15.6 M 0.449 0.76 0.75 3.81 120 1.22 2.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/a36a714a-9ff8-4f2f-8a2e-0357ef3c7b29/@@download/cross_correlation_plot/ENCFF000QHG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKY richard-myers:SL3361 ENCFF000QHG Illumina Genome Analyzer IIx 2016-12-11T04:06:58.993403+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1652q803695Kj1j8qPQgkfP ENCSR000BGW https://www.encodeproject.org/experiments/ENCSR000BGW transcription factor SPI1-human K562 immortalized cell line richard-myers ENCODE2 pending SE 36 Illumina Genome Analyzer IIx unreviewed ENCSR000BLK https://www.encodeproject.org/experiments/ENCSR000BLK transcription factor SRF-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF571WED https://www.encodeproject.org/files/ENCFF571WED/@@download/ENCFF571WED.bam ENCFF103BRE https://www.encodeproject.org/files/ENCFF103BRE/@@download/ENCFF103BRE.bam 23.5 M 0 18.5 M 0.788 SE 36 36 native 0.0 M 13.7 M 6.7 M 0.286 0.50 0.46 1.60 115 1.63 2.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/97265503-96c7-4913-9ef6-34af2b683499/@@download/cross_correlation_plot/ENCFF000QHH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJK richard-myers:SL3162 ENCFF000QHH Illumina Genome Analyzer IIx 2016-12-11T04:45:18.547752+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1663Y003697yz601ypVJ3p4 ENCSR000BLK https://www.encodeproject.org/experiments/ENCSR000BLK transcription factor SRF-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF265HCR https://www.encodeproject.org/files/ENCFF265HCR/@@download/ENCFF265HCR.bam ENCFF039HVS https://www.encodeproject.org/files/ENCFF039HVS/@@download/ENCFF039HVS.bam 25.9 M 0 23.9 M 0.922 SE 36 36 native 0.0 M 17.4 M 15.9 M 0.611 0.91 0.91 11.45 100 1.11 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/df898628-bdbe-4b9b-aa47-2ebaf9e38d17/@@download/cross_correlation_plot/ENCFF000QHK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJJ richard-myers:SL3272 ENCFF000QHK Illumina Genome Analyzer IIx 2016-12-11T04:49:06.909538+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1663j80369BJyPz9fb9qYQF ENCSR000BRR https://www.encodeproject.org/experiments/ENCSR000BRR transcription factor STAT5A-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF222UZK https://www.encodeproject.org/files/ENCFF222UZK/@@download/ENCFF222UZK.bam ENCFF989BZQ https://www.encodeproject.org/files/ENCFF989BZQ/@@download/ENCFF989BZQ.bam 47.7 M 0 41.2 M 0.864 SE 36 36 native 0.0 M 31.2 M 29.8 M 0.624 0.96 0.97 31.09 125 1.11 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/93b897f7-047b-4e63-a415-0ca6ea1b2390/@@download/cross_correlation_plot/ENCFF000QIB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSL richard-myers:SL8673 ENCFF000QIB Illumina Genome Analyzer IIx 2016-12-11T03:57:40.232978+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164fp80369KQ3Yk1yz1kgX0 ENCSR000BRR https://www.encodeproject.org/experiments/ENCSR000BRR transcription factor STAT5A-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF526DBU https://www.encodeproject.org/files/ENCFF526DBU/@@download/ENCFF526DBU.bam ENCFF560FJD https://www.encodeproject.org/files/ENCFF560FJD/@@download/ENCFF560FJD.bam 51.6 M 0 45.0 M 0.873 SE 36 36 native 0.0 M 33.6 M 32.7 M 0.634 0.98 0.98 54.48 115 1.04 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4a9e409-95a9-4d18-971f-3458d762cf26/@@download/cross_correlation_plot/ENCFF000QID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSM richard-myers:SL9116 ENCFF000QID Illumina Genome Analyzer IIx 2016-12-11T04:03:51.978089+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164fyj0369BJyPz9fb9qY35 ENCSR000BKS https://www.encodeproject.org/experiments/ENCSR000BKS transcription factor TAF1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF025QKV https://www.encodeproject.org/files/ENCFF025QKV/@@download/ENCFF025QKV.bam ENCFF993RMP https://www.encodeproject.org/files/ENCFF993RMP/@@download/ENCFF993RMP.bam 12.2 M 0 10.8 M 0.880 SE 36 36 native 0.0 M 8.0 M 4.6 M 0.376 0.58 0.54 1.96 125 2.82 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d80eab1-ddcc-4738-91d2-125c9f9f220c/@@download/cross_correlation_plot/ENCFF000QHU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNV richard-myers:SL2941 ENCFF000QHU Illumina Genome Analyzer IIx 2016-12-11T03:41:49.541005+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164yx003692yykb1zBpz7k8 ENCSR000BKS https://www.encodeproject.org/experiments/ENCSR000BKS transcription factor TAF1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF919HAZ https://www.encodeproject.org/files/ENCFF919HAZ/@@download/ENCFF919HAZ.bam ENCFF075NNL https://www.encodeproject.org/files/ENCFF075NNL/@@download/ENCFF075NNL.bam 16.2 M 0 13.2 M 0.812 SE 36 36 native 0.0 M 10.1 M 5.4 M 0.331 0.53 0.50 1.76 125 2.40 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/804ed35e-9705-4158-99af-b776f61efbf3/@@download/cross_correlation_plot/ENCFF000QHW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQG richard-myers:SL2942 ENCFF000QHW Illumina Genome Analyzer IIx 2016-12-11T03:45:28.144706+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164z1Q03692yykb1zBpz7kV ENCSR000BNM https://www.encodeproject.org/experiments/ENCSR000BNM transcription factor TAF7-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF518PIS https://www.encodeproject.org/files/ENCFF518PIS/@@download/ENCFF518PIS.bam ENCFF684LYI https://www.encodeproject.org/files/ENCFF684LYI/@@download/ENCFF684LYI.bam 23.0 M 0 21.0 M 0.913 SE 36 36 native 0.0 M 14.9 M 13.4 M 0.581 0.90 0.90 9.79 90 1.12 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/66232647-258b-49d3-95b2-295c6d957fec/@@download/cross_correlation_plot/ENCFF000QII.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JES richard-myers:SL3274 ENCFF000QII Illumina Genome Analyzer IIx 2016-12-11T03:51:58.664717+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164vY00369Bxb30J6x5bZJQ ENCSR000BNM https://www.encodeproject.org/experiments/ENCSR000BNM transcription factor TAF7-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF126SXE https://www.encodeproject.org/files/ENCFF126SXE/@@download/ENCFF126SXE.bam ENCFF940IQI https://www.encodeproject.org/files/ENCFF940IQI/@@download/ENCFF940IQI.bam 28.5 M 0 24.4 M 0.857 SE 36 36 native 0.0 M 17.8 M 14.2 M 0.498 0.80 0.80 4.74 110 1.16 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/27409a87-d7ac-4f9d-a7de-f816acdff02d/@@download/cross_correlation_plot/ENCFF000QIM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JER richard-myers:SL3568 ENCFF000QIM Illumina Genome Analyzer IIx 2016-12-11T03:57:04.632677+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164vgQ0369GF0YB1zjPf6j4 ENCSR353HEP https://www.encodeproject.org/experiments/ENCSR353HEP "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF283ZIL https://www.encodeproject.org/files/ENCFF283ZIL/@@download/ENCFF283ZIL.bam ENCFF556EGU https://www.encodeproject.org/files/ENCFF556EGU/@@download/ENCFF556EGU.bam 23.5 M 0 22.7 M 0.964 SE 50 50 native 0.0 M 18.3 M 17.8 M 0.756 0.98 0.98 41.94 70 1.08 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/3acb96f9-15f3-486e-8d8c-aaca6dfd272e/@@download/cross_correlation_plot/ENCFF002BFS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB446XUJ richard-myers:SL41796 ENCFF002BFS HiSeq 2000 2016-10-09T17:00:45.643831+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4VKQ0jv1xPyfX78Yz4jFF ENCSR353HEP https://www.encodeproject.org/experiments/ENCSR353HEP "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF903JXA https://www.encodeproject.org/files/ENCFF903JXA/@@download/ENCFF903JXA.bam ENCFF866DXQ https://www.encodeproject.org/files/ENCFF866DXQ/@@download/ENCFF866DXQ.bam 31.9 M 0 30.8 M 0.964 SE 50 50 native 0.0 M 24.6 M 23.7 M 0.742 0.97 0.97 31.04 95 1.06 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/202c48b5-8eb6-4517-a0e0-82ee34b08cc5/@@download/cross_correlation_plot/ENCFF002BFT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB522MIT richard-myers:SL43826 ENCFF002BFT HiSeq 2000 2016-10-09T17:00:51.015000+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4VPj0jv1f60PxyZ9JGPPv ENCSR863KUB https://www.encodeproject.org/experiments/ENCSR863KUB transcription factor TCF7-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF742TAS https://www.encodeproject.org/files/ENCFF742TAS/@@download/ENCFF742TAS.bam ENCFF678DAV https://www.encodeproject.org/files/ENCFF678DAV/@@download/ENCFF678DAV.bam 39.9 M 0 36.6 M 0.917 SE 50 50 native 0.0 M 29.7 M 28.5 M 0.714 0.97 0.97 32.62 80 1.04 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/b43c98ac-33b5-44b7-bf4d-ad2f93764575/@@download/cross_correlation_plot/ENCFF204JMO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB467WZE richard-myers:SL35076 ENCFF204JMO HiSeq 2000 2016-10-09T17:03:09.848258+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv667j0jv1pBzjzVx0B7f5k ENCSR863KUB https://www.encodeproject.org/experiments/ENCSR863KUB transcription factor TCF7-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF587PVQ https://www.encodeproject.org/files/ENCFF587PVQ/@@download/ENCFF587PVQ.bam ENCFF087TRL https://www.encodeproject.org/files/ENCFF087TRL/@@download/ENCFF087TRL.bam 25.9 M 0 25.0 M 0.965 SE 50 50 native 0.0 M 20.3 M 19.4 M 0.749 0.96 0.96 27.06 80 1.05 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/cacf89ad-9454-4a98-8daa-35f9aa2d3159/@@download/cross_correlation_plot/ENCFF959QTN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB319SSO richard-myers:SL41794 ENCFF959QTN HiSeq 2000 2016-10-09T17:02:13.376318+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv669j0jv1XQK7ZK9053XgJ ENCSR000BRK https://www.encodeproject.org/experiments/ENCSR000BRK transcription factor TEAD4-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF790FNF https://www.encodeproject.org/files/ENCFF790FNF/@@download/ENCFF790FNF.bam ENCFF683WRR https://www.encodeproject.org/files/ENCFF683WRR/@@download/ENCFF683WRR.bam 40.6 M 0 37.3 M 0.919 SE 36 36 native 0.0 M 29.0 M 26.8 M 0.660 0.94 0.95 22.95 130 1.28 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/05909776-6aea-4df8-976f-5a71a85847d3/@@download/cross_correlation_plot/ENCFF000QIS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQB richard-myers:SL7571 ENCFF000QIS Illumina Genome Analyzer IIx 2016-12-11T03:17:44.612961+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1648V803692yykb1zBpz7ZZ ENCSR000BRK https://www.encodeproject.org/experiments/ENCSR000BRK transcription factor TEAD4-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF516UTV https://www.encodeproject.org/files/ENCFF516UTV/@@download/ENCFF516UTV.bam ENCFF324YZW https://www.encodeproject.org/files/ENCFF324YZW/@@download/ENCFF324YZW.bam 50.7 M 0 44.0 M 0.869 SE 36 36 native 0.0 M 33.8 M 31.3 M 0.616 0.94 0.95 26.01 120 1.35 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/63b445bd-bdbb-4721-968e-3aa096dc8fbf/@@download/cross_correlation_plot/ENCFF000QIW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPY richard-myers:SL7841 ENCFF000QIW Illumina Genome Analyzer IIx 2016-12-11T03:23:19.867822+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1648f0036933PVVJ7Qq01Y8 ENCSR224IKA https://www.encodeproject.org/experiments/ENCSR224IKA transcription factor TFDP1-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF684CFB https://www.encodeproject.org/files/ENCFF684CFB/@@download/ENCFF684CFB.bam ENCFF212ROS https://www.encodeproject.org/files/ENCFF212ROS/@@download/ENCFF212ROS.bam 26.0 M 0 25.3 M 0.973 SE 50 50 native 0.0 M 20.5 M 19.8 M 0.761 0.97 0.97 38.90 80 1.05 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d955ae3-5cf4-4678-8812-a4e83ad70c52/@@download/cross_correlation_plot/ENCFF002BFU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB541KFU richard-myers:SL41797 ENCFF002BFU HiSeq 2000 2016-10-09T16:53:57.238761+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4JG00jv1g5yGjfvVx0P87 ENCSR224IKA https://www.encodeproject.org/experiments/ENCSR224IKA transcription factor TFDP1-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF780GMX https://www.encodeproject.org/files/ENCFF780GMX/@@download/ENCFF780GMX.bam ENCFF433NNE https://www.encodeproject.org/files/ENCFF433NNE/@@download/ENCFF433NNE.bam 35.0 M 0 33.7 M 0.963 SE 50 50 native 0.0 M 26.8 M 25.4 M 0.724 0.95 0.95 21.71 110 1.07 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b201ab2-a396-4e7d-83b4-4d99a6170e2c/@@download/cross_correlation_plot/ENCFF002BFV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB990CQP richard-myers:SL43827 ENCFF002BFV HiSeq 2000 2016-10-09T17:05:14.172098+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4JJ80jv1g5yGjfvVx0P8P ENCSR000BNN https://www.encodeproject.org/experiments/ENCSR000BNN transcription factor THAP1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF393ZAK https://www.encodeproject.org/files/ENCFF393ZAK/@@download/ENCFF393ZAK.bam ENCFF926VYO https://www.encodeproject.org/files/ENCFF926VYO/@@download/ENCFF926VYO.bam 23.1 M 0 17.4 M 0.753 SE 36 36 native 0.0 M 11.8 M 10.3 M 0.445 0.87 0.88 8.10 120 1.33 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6438227-c32b-436e-aa70-fbde7f36f4cf/@@download/cross_correlation_plot/ENCFF000QIU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCQ richard-myers:SL2202 ENCFF000QIU Illumina Genome Analyzer IIx 2016-12-11T02:21:33.827635+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163z3j03697k5jKB6pJ7qpk ENCSR000BNN https://www.encodeproject.org/experiments/ENCSR000BNN transcription factor THAP1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF680COV https://www.encodeproject.org/files/ENCFF680COV/@@download/ENCFF680COV.bam ENCFF158OEK https://www.encodeproject.org/files/ENCFF158OEK/@@download/ENCFF158OEK.bam 26.7 M 0 21.5 M 0.803 SE 36 36 native 0.0 M 15.5 M 10.3 M 0.386 0.67 0.67 2.91 90 1.55 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/3376daca-a634-45c3-b508-ffc34df72be7/@@download/cross_correlation_plot/ENCFF000QIY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJW richard-myers:SL3186 ENCFF000QIY Illumina Genome Analyzer IIx 2016-12-11T02:22:09.511332+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163z8j03696z7JqGk4Yzy6F ENCSR000BRW https://www.encodeproject.org/experiments/ENCSR000BRW transcription factor TRIM28-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF793KZB https://www.encodeproject.org/files/ENCFF793KZB/@@download/ENCFF793KZB.bam ENCFF555KVE https://www.encodeproject.org/files/ENCFF555KVE/@@download/ENCFF555KVE.bam 43.4 M 0 38.1 M 0.878 SE 36 36 36 0.0 M 28.5 M 26.8 M 0.617 0.95 0.96 22.73 120 1.08 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d003096-bf0d-49b2-a57d-0e7e9ca4748b/@@download/cross_correlation_plot/ENCFF000QJK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRJ richard-myers:SL8672 ENCFF000QJK Illumina Genome Analyzer IIx 2016-10-28T23:11:14.980496+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042PX80jv1Qz3vkY43yV57F ENCSR000BRW https://www.encodeproject.org/experiments/ENCSR000BRW transcription factor TRIM28-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF397ZVS https://www.encodeproject.org/files/ENCFF397ZVS/@@download/ENCFF397ZVS.bam ENCFF555KVE https://www.encodeproject.org/files/ENCFF555KVE/@@download/ENCFF555KVE.bam 43.4 M 0 38.1 M 0.878 SE 36 36 native 0.0 M 28.5 M 26.8 M 0.617 0.95 0.96 22.73 120 1.08 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/0b6af8e6-e625-43c7-a0f2-0d98189829d9/@@download/cross_correlation_plot/ENCFF000QJK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRJ richard-myers:SL8672 ENCFF000QJK Illumina Genome Analyzer IIx 2016-10-09T17:00:06.189386+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45jQ0jv1XYYX2Fxk3f53G ENCSR000BRW https://www.encodeproject.org/experiments/ENCSR000BRW transcription factor TRIM28-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF206YYH https://www.encodeproject.org/files/ENCFF206YYH/@@download/ENCFF206YYH.bam ENCFF147MVP https://www.encodeproject.org/files/ENCFF147MVP/@@download/ENCFF147MVP.bam 39.2 M 0 35.3 M 0.901 SE 36 36 36 0.0 M 26.3 M 17.1 M 0.437 0.66 0.50 1.04 120 1.08 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1bfd94f-afde-4a32-822b-527bebc427e9/@@download/cross_correlation_plot/ENCFF261BMQ-ENCFF000QJH_pooled-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCH richard-myers:SL9830 "ENCFF000QJH,ENCFF261BMQ" "Illumina Genome Analyzer IIx,HiSeq 2000" 2016-10-28T23:09:25.018020+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/F042PZ80jv1v1VzjFZ3GQjjb ENCSR000BRW https://www.encodeproject.org/experiments/ENCSR000BRW transcription factor TRIM28-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF904CPI https://www.encodeproject.org/files/ENCFF904CPI/@@download/ENCFF904CPI.bam ENCFF648HIU https://www.encodeproject.org/files/ENCFF648HIU/@@download/ENCFF648HIU.bam 12.7 M 0 11.6 M 0.911 SE 36 36 native 0.0 M 8.6 M 8.5 M 0.668 0.99 0.99 85.21 125 1.08 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/35d84676-79c4-4639-afc0-65969908d041/@@download/cross_correlation_plot/ENCFF000QJH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCH richard-myers:SL9830 ENCFF000QJH Illumina Genome Analyzer IIx 2016-10-09T16:59:09.502271+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv45kj0jv1XYYX2Fxk3f53Z ENCSR000BKT https://www.encodeproject.org/experiments/ENCSR000BKT transcription factor USF1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF587WWS https://www.encodeproject.org/files/ENCFF587WWS/@@download/ENCFF587WWS.bam ENCFF523RSS https://www.encodeproject.org/files/ENCFF523RSS/@@download/ENCFF523RSS.bam 24.3 M 0 21.7 M 0.892 SE 36 36 native 0.0 M 16.8 M 10.3 M 0.423 0.61 0.60 2.26 125 2.14 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/9db80827-add1-4e40-a336-3ca96134c9e6/@@download/cross_correlation_plot/ENCFF000QJR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQR richard-myers:SL3163 ENCFF000QJR Illumina Genome Analyzer IIx 2016-12-11T02:57:11.664803+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164780036969X0jJ6p3ffq1 ENCSR000BKT https://www.encodeproject.org/experiments/ENCSR000BKT transcription factor USF1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF794ABP https://www.encodeproject.org/files/ENCFF794ABP/@@download/ENCFF794ABP.bam ENCFF070DTB https://www.encodeproject.org/files/ENCFF070DTB/@@download/ENCFF070DTB.bam 13.3 M 0 11.8 M 0.883 SE 36 36 native 0.0 M 8.9 M 4.2 M 0.317 0.47 0.41 1.39 160 3.18 2.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/71fe2617-eca9-4c24-b0ce-f775a433661c/@@download/cross_correlation_plot/ENCFF000QJP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUY richard-myers:SL3166 ENCFF000QJP Illumina Genome Analyzer IIx 2016-12-11T02:44:28.387414+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1647Gj03696Kk1YFv8qy54K ENCSR000BKU https://www.encodeproject.org/experiments/ENCSR000BKU transcription factor YY1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF651HPM https://www.encodeproject.org/files/ENCFF651HPM/@@download/ENCFF651HPM.bam ENCFF782TYI https://www.encodeproject.org/files/ENCFF782TYI/@@download/ENCFF782TYI.bam 25.0 M 0 15.0 M 0.599 SE 36 36 native 0.0 M 11.1 M 7.0 M 0.278 0.64 0.64 2.60 120 3.67 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/891888cf-bae7-4e45-8fe9-e126b4e4c552/@@download/cross_correlation_plot/ENCFF000QKK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNA richard-myers:SL2203 ENCFF000QKK Illumina Genome Analyzer IIx 2016-12-10T20:35:59.174783+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162xP803692BKq0F3V3jFV9 ENCSR000BKU https://www.encodeproject.org/experiments/ENCSR000BKU transcription factor YY1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF044TAL https://www.encodeproject.org/files/ENCFF044TAL/@@download/ENCFF044TAL.bam ENCFF543BDT https://www.encodeproject.org/files/ENCFF543BDT/@@download/ENCFF543BDT.bam 10.5 M 0 9.2 M 0.876 SE 36 36 native 0.0 M 7.1 M 4.6 M 0.440 0.66 0.64 2.59 125 1.63 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5609024-e89f-4f87-99bf-1857afa7e1e1/@@download/cross_correlation_plot/ENCFF000QKJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNB richard-myers:SL2944 ENCFF000QKJ Illumina Genome Analyzer IIx 2016-12-10T20:27:48.050330+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162xYj03692pJ09J76g5fk6 ENCSR000BMH https://www.encodeproject.org/experiments/ENCSR000BMH transcription factor YY1-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF567GMS https://www.encodeproject.org/files/ENCFF567GMS/@@download/ENCFF567GMS.bam ENCFF033HSE https://www.encodeproject.org/files/ENCFF033HSE/@@download/ENCFF033HSE.bam 25.0 M 0 17.0 M 0.683 SE 36 36 native 0.0 M 12.4 M 7.1 M 0.284 0.58 0.55 2.06 100 1.47 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/8178fc08-df3f-4e85-9b53-00c94d9a4dfe/@@download/cross_correlation_plot/ENCFF000QKF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUA richard-myers:SL2946 ENCFF000QKF Illumina Genome Analyzer IIx 2016-12-11T03:35:17.128317+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164kf80369GF0YB1zjPf6gP ENCSR000BMH https://www.encodeproject.org/experiments/ENCSR000BMH transcription factor YY1-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF067TWQ https://www.encodeproject.org/files/ENCFF067TWQ/@@download/ENCFF067TWQ.bam ENCFF723CCK https://www.encodeproject.org/files/ENCFF723CCK/@@download/ENCFF723CCK.bam 35.6 M 0 30.6 M 0.858 SE 36 36 native 0.0 M 22.0 M 18.0 M 0.506 0.82 0.88 9.76 100 2.10 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/de608847-be2e-46ef-8f91-e880c114b20e/@@download/cross_correlation_plot/ENCFF000QKI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUU richard-myers:SL3071 ENCFF000QKI Illumina Genome Analyzer IIx 2016-12-11T03:56:21.543454+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164kpj0369KQ3Yk1yz1kgXy ENCSR286PCG https://www.encodeproject.org/experiments/ENCSR286PCG transcription factor ZBED1-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF035GBL https://www.encodeproject.org/files/ENCFF035GBL/@@download/ENCFF035GBL.bam ENCFF061DUL https://www.encodeproject.org/files/ENCFF061DUL/@@download/ENCFF061DUL.bam 29.7 M 0 28.3 M 0.953 SE 50 50 native 0.0 M 22.7 M 21.8 M 0.733 0.97 0.98 40.63 95 1.05 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/19f1ce2e-6c15-4413-b55f-b465aeaf747b/@@download/cross_correlation_plot/ENCFF002BFO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB546EGC richard-myers:SL34347 ENCFF002BFO HiSeq 2000 2016-10-09T17:00:57.462894+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Vx80jv1g5yGjfvVx0PGV ENCSR286PCG https://www.encodeproject.org/experiments/ENCSR286PCG transcription factor ZBED1-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF261BXO https://www.encodeproject.org/files/ENCFF261BXO/@@download/ENCFF261BXO.bam ENCFF061RFH https://www.encodeproject.org/files/ENCFF061RFH/@@download/ENCFF061RFH.bam 31.7 M 0 30.6 M 0.966 SE 50 50 native 0.0 M 24.8 M 23.7 M 0.749 0.97 0.97 37.91 85 1.05 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/50692180-f6d0-431a-aad9-8a404d4f073f/@@download/cross_correlation_plot/ENCFF002BFP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB351DFX richard-myers:SL41790 ENCFF002BFP HiSeq 2000 2016-10-09T17:00:45.665519+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Vyj0jv1XvFGkBjjfjQkq ENCSR331GDC https://www.encodeproject.org/experiments/ENCSR331GDC transcription factor ZBTB11-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF544ZPF https://www.encodeproject.org/files/ENCFF544ZPF/@@download/ENCFF544ZPF.bam ENCFF818RKE https://www.encodeproject.org/files/ENCFF818RKE/@@download/ENCFF818RKE.bam 33.3 M 0 29.4 M 0.882 SE 50 50 native 0.0 M 24.1 M 22.3 M 0.669 0.93 0.95 24.71 120 1.16 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a5d3a67-2dcc-49f1-8226-90b40583ee7a/@@download/cross_correlation_plot/ENCFF052ZGR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB146UXU richard-myers:SL65265 ENCFF052ZGR HiSeq 2000 2016-10-09T17:03:13.873751+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv64400jv1QZp37BGvK2BKB ENCSR331GDC https://www.encodeproject.org/experiments/ENCSR331GDC transcription factor ZBTB11-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF290MEZ https://www.encodeproject.org/files/ENCFF290MEZ/@@download/ENCFF290MEZ.bam ENCFF465CQV https://www.encodeproject.org/files/ENCFF465CQV/@@download/ENCFF465CQV.bam 25.0 M 0 22.6 M 0.906 SE 50 50 native 0.0 M 19.0 M 15.0 M 0.600 0.80 0.82 5.39 125 1.30 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc57de25-2e2c-4bb3-8f4b-5beb3ba34b71/@@download/cross_correlation_plot/ENCFF088CRF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB676ADT richard-myers:SL77449 ENCFF088CRF HiSeq 2000 2016-10-09T17:02:37.971378+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv645Q0jv1YvGVzF100Zf83 ENCSR000BKF https://www.encodeproject.org/experiments/ENCSR000BKF transcription factor ZBTB33-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF133IED https://www.encodeproject.org/files/ENCFF133IED/@@download/ENCFF133IED.bam ENCFF099IWI https://www.encodeproject.org/files/ENCFF099IWI/@@download/ENCFF099IWI.bam 33.3 M 0 29.9 M 0.898 SE 36 36 native 0.0 M 22.0 M 17.6 M 0.528 0.80 0.79 4.59 130 1.09 2.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c0fec8a-0030-48f3-a5f5-8aa05f7a19fe/@@download/cross_correlation_plot/ENCFF000QKS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEE richard-myers:SL1114 ENCFF000QKS Illumina Genome Analyzer IIx 2016-12-11T04:46:03.826438+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165v400369445BJJ915X9vj ENCSR000BKF https://www.encodeproject.org/experiments/ENCSR000BKF transcription factor ZBTB33-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF773RXE https://www.encodeproject.org/files/ENCFF773RXE/@@download/ENCFF773RXE.bam ENCFF199BYU https://www.encodeproject.org/files/ENCFF199BYU/@@download/ENCFF199BYU.bam 20.8 M 0 18.3 M 0.881 SE 36 36 native 0.0 M 13.0 M 12.4 M 0.597 0.96 0.96 24.15 135 1.13 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/06b0ce22-647f-41de-8028-7e00faed21cd/@@download/cross_correlation_plot/ENCFF000QKR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEF richard-myers:SL1320 ENCFF000QKR Illumina Genome Analyzer IIx 2016-12-11T04:38:18.565408+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165v900369KbxV61z4GFvjg ENCSR000BME https://www.encodeproject.org/experiments/ENCSR000BME transcription factor ZBTB7A-human K562 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF784SCN https://www.encodeproject.org/files/ENCFF784SCN/@@download/ENCFF784SCN.bam ENCFF919LAP https://www.encodeproject.org/files/ENCFF919LAP/@@download/ENCFF919LAP.bam 22.1 M 0 19.2 M 0.869 SE 36 36 native 0.0 M 14.4 M 11.3 M 0.511 0.78 0.77 4.17 130 1.20 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/51985544-e753-49b6-b701-737888c74545/@@download/cross_correlation_plot/ENCFF000QLC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSR richard-myers:SL2265 ENCFF000QLC Illumina Genome Analyzer IIx 2016-12-12T17:16:59.668260+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16218803692pJ09J76g5fZq ENCSR000BME https://www.encodeproject.org/experiments/ENCSR000BME transcription factor ZBTB7A-human K562 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF778PDI https://www.encodeproject.org/files/ENCFF778PDI/@@download/ENCFF778PDI.bam ENCFF203KTA https://www.encodeproject.org/files/ENCFF203KTA/@@download/ENCFF203KTA.bam 37.2 M 0 29.6 M 0.796 SE 36 36 native 0.0 M 21.9 M 16.9 M 0.455 0.77 0.77 4.14 90 1.67 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef363373-2e2c-4681-bf0a-86517b83d77c/@@download/cross_correlation_plot/ENCFF000QLG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQX richard-myers:SL3183 ENCFF000QLG Illumina Genome Analyzer IIx 2016-12-12T17:17:38.526840+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1621Gj03690xXYVJ7Fj2bjk ENCSR102KIN https://www.encodeproject.org/experiments/ENCSR102KIN transcription factor ZMYM3-human K562 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF056HVT https://www.encodeproject.org/files/ENCFF056HVT/@@download/ENCFF056HVT.bam ENCFF047ILC https://www.encodeproject.org/files/ENCFF047ILC/@@download/ENCFF047ILC.bam 31.4 M 0 29.7 M 0.947 SE 50 50 50 0.0 M 23.6 M 22.5 M 0.716 0.96 0.96 24.59 170 1.19 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/53fec088-9327-4722-b5d1-a638cc3a7da5/@@download/cross_correlation_plot/ENCFF446UUV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB951ZFP richard-myers:SL75587 ENCFF446UUV HiSeq 2000 2016-09-01T17:43:40.354307+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V81j0369B5KbZ6VQxzfv8 ENCSR102KIN https://www.encodeproject.org/experiments/ENCSR102KIN transcription factor ZMYM3-human K562 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF900QPQ https://www.encodeproject.org/files/ENCFF900QPQ/@@download/ENCFF900QPQ.bam ENCFF426GAB https://www.encodeproject.org/files/ENCFF426GAB/@@download/ENCFF426GAB.bam 27.5 M 0 26.7 M 0.971 SE 76 50 50 0.0 M 21.8 M 21.0 M 0.763 0.97 0.97 30.49 155 1.10 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab3e9098-ce65-4930-8390-e35eb93874b9/@@download/cross_correlation_plot/ENCFF556LOK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB515XQN richard-myers:SL146879 ENCFF556LOK HiSeq 2000 2016-09-01T17:43:27.471237+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bz3V84Q0369K2Qy8BxQbP2VF ENCSR205FOW https://www.encodeproject.org/experiments/ENCSR205FOW transcription factor ATF3-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF521EJT https://www.encodeproject.org/files/ENCFF521EJT/@@download/ENCFF521EJT.bam ENCFF214HUH https://www.encodeproject.org/files/ENCFF214HUH/@@download/ENCFF214HUH.bam 43.9 M 0 41.8 M 0.953 SE 50 50 native 0.0 M 34.0 M 31.6 M 0.721 0.94 0.94 16.86 145 1.04 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/1df2eac6-e0c5-49f2-aec5-3a5ddd63d50b/@@download/cross_correlation_plot/ENCFF876KCK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB341QAT richard-myers:SL77676 ENCFF876KCK HiSeq 2000 2016-10-09T17:03:15.260652+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4KP00jv1xPyfX78Yz4j8y ENCSR205FOW https://www.encodeproject.org/experiments/ENCSR205FOW transcription factor ATF3-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF601UUP https://www.encodeproject.org/files/ENCFF601UUP/@@download/ENCFF601UUP.bam ENCFF379HKK https://www.encodeproject.org/files/ENCFF379HKK/@@download/ENCFF379HKK.bam 46.7 M 0 43.9 M 0.942 SE 50 50 native 0.0 M 35.5 M 32.8 M 0.702 0.94 0.94 16.61 120 1.05 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/58209211-bc8e-4756-aade-80c8fb0eb592/@@download/cross_correlation_plot/ENCFF996PYT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB161XBQ richard-myers:SL93435 ENCFF996PYT HiSeq 2000 2016-10-09T17:03:42.571696+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4KQ80jv1XYYX2Fxk3f5Kb ENCSR480LIS https://www.encodeproject.org/experiments/ENCSR480LIS transcription factor ATF3-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF150DAE https://www.encodeproject.org/files/ENCFF150DAE/@@download/ENCFF150DAE.bam ENCFF302IKM https://www.encodeproject.org/files/ENCFF302IKM/@@download/ENCFF302IKM.bam 24.8 M 0 24.1 M 0.970 SE 50 50 native 0.0 M 20.0 M 18.5 M 0.747 0.94 0.94 16.72 145 1.08 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/380e1444-4ea0-4b61-a146-29838a493564/@@download/cross_correlation_plot/ENCFF522PUA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB388CBL richard-myers:SL85866 ENCFF522PUA HiSeq 2000 2016-10-09T17:08:28.260375+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3g680jv1zBYbxYJ5zzyqb ENCSR480LIS https://www.encodeproject.org/experiments/ENCSR480LIS transcription factor ATF3-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF360DAO https://www.encodeproject.org/files/ENCFF360DAO/@@download/ENCFF360DAO.bam ENCFF959QIW https://www.encodeproject.org/files/ENCFF959QIW/@@download/ENCFF959QIW.bam 37.4 M 0 35.7 M 0.955 SE 50 50 native 0.0 M 29.2 M 27.2 M 0.727 0.94 0.94 16.55 145 1.08 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/d460d752-b3a1-4083-a48a-b445e2891448/@@download/cross_correlation_plot/ENCFF094LXX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB516KWE richard-myers:SL77677 ENCFF094LXX HiSeq 2000 2016-10-09T17:08:53.613337+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3g7Q0jv1XvFGkBjjfjPx5 ENCSR019XRC https://www.encodeproject.org/experiments/ENCSR019XRC control Control-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF610PNU https://www.encodeproject.org/files/ENCFF610PNU/@@download/ENCFF610PNU.bam ENCFF558ZSN https://www.encodeproject.org/files/ENCFF558ZSN/@@download/ENCFF558ZSN.bam 43.3 M 0 42.3 M 0.977 SE 50 50 None 0.0 M 34.3 M 33.1 M 0.764 0.97 0.97 38.45 100 1.01 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/061f53f2-67a8-4eb1-a1cf-692d83308c08/@@download/cross_correlation_plot/ENCFF086CFB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB759WCB richard-myers:SL85886 ENCFF086CFB HiSeq 2000 2016-05-06T18:15:24.522188+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq4y003694b726XQ2yPx0b ENCSR443AIH https://www.encodeproject.org/experiments/ENCSR443AIH control Control-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF406XEH https://www.encodeproject.org/files/ENCFF406XEH/@@download/ENCFF406XEH.bam ENCFF516YKX https://www.encodeproject.org/files/ENCFF516YKX/@@download/ENCFF516YKX.bam 47.9 M 0 46.0 M 0.961 SE 50 50 None 0.0 M 36.6 M 35.2 M 0.736 0.97 0.97 33.73 80 1.03 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/2eb00a71-df70-404f-af48-579105074fdf/@@download/cross_correlation_plot/ENCFF929JYK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB370XFY richard-myers:SL89749 ENCFF929JYK HiSeq 2000 2016-05-06T18:13:13.205183+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqJ8003692Fy2Pk02vGVJY ENCSR621CSR https://www.encodeproject.org/experiments/ENCSR621CSR control Control-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF200YPH https://www.encodeproject.org/files/ENCFF200YPH/@@download/ENCFF200YPH.bam ENCFF448TFZ https://www.encodeproject.org/files/ENCFF448TFZ/@@download/ENCFF448TFZ.bam 38.1 M 0 36.7 M 0.963 SE 50 50 None 0.0 M 29.2 M 28.3 M 0.744 0.98 0.98 43.26 85 1.03 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/c5797373-ddf6-4696-b4f7-f25a0f413e4a/@@download/cross_correlation_plot/ENCFF977SGP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB917GEI richard-myers:SL89752 ENCFF977SGP HiSeq 2000 2016-05-06T18:08:52.652980+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqV28036986q4kkQ2Q0KbZ ENCSR628ONI https://www.encodeproject.org/experiments/ENCSR628ONI control Control-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF259AXY https://www.encodeproject.org/files/ENCFF259AXY/@@download/ENCFF259AXY.bam ENCFF580MZG https://www.encodeproject.org/files/ENCFF580MZG/@@download/ENCFF580MZG.bam 47.2 M 0 45.9 M 0.972 SE 50 50 None 0.0 M 35.5 M 34.5 M 0.730 0.98 0.98 50.65 115 1.06 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8790f0b-87d1-499b-b9af-47d1a326721f/@@download/cross_correlation_plot/ENCFF247MLF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB594RUV richard-myers:SL77459 ENCFF247MLF HiSeq 2000 2016-05-06T18:08:28.958738+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqV88036961GyjjQ2QP8bB ENCSR769JUI https://www.encodeproject.org/experiments/ENCSR769JUI control Control-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF995OIG https://www.encodeproject.org/files/ENCFF995OIG/@@download/ENCFF995OIG.bam ENCFF038TGJ https://www.encodeproject.org/files/ENCFF038TGJ/@@download/ENCFF038TGJ.bam 56.1 M 0 55.0 M 0.981 SE 50 50 None 0.0 M 43.6 M 42.6 M 0.760 0.98 0.98 61.58 90 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/6fc64798-436d-4a01-9218-98ac709b97f3/@@download/cross_correlation_plot/ENCFF958NMQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB060NXP richard-myers:SL77458 ENCFF958NMQ HiSeq 2000 2016-05-06T18:05:07.331931+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqZ8j03692Fy2Pk02vGVf2 ENCSR849OTN https://www.encodeproject.org/experiments/ENCSR849OTN control Control-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF370PSF https://www.encodeproject.org/files/ENCFF370PSF/@@download/ENCFF370PSF.bam ENCFF349KXI https://www.encodeproject.org/files/ENCFF349KXI/@@download/ENCFF349KXI.bam 39.7 M 0 38.8 M 0.978 SE 50 50 None 0.0 M 31.6 M 30.6 M 0.771 0.98 0.98 45.50 100 1.01 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe9472a7-9962-472b-b610-bb7d78c552a6/@@download/cross_correlation_plot/ENCFF805GCU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB378JMZ richard-myers:SL85885 ENCFF805GCU HiSeq 2000 2016-05-06T18:03:24.890737+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqfxj0369PPK4xgv2b79Z3 ENCSR904IXG https://www.encodeproject.org/experiments/ENCSR904IXG control Control-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF985NSN https://www.encodeproject.org/files/ENCFF985NSN/@@download/ENCFF985NSN.bam ENCFF350FIM https://www.encodeproject.org/files/ENCFF350FIM/@@download/ENCFF350FIM.bam 40.8 M 0 38.8 M 0.951 SE 50 50 None 0.0 M 30.9 M 30.1 M 0.737 0.98 0.98 50.20 70 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c499398-e29d-4d4f-aa3d-acfcb22c23e0/@@download/cross_correlation_plot/ENCFF158AFC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB542TCA richard-myers:SL89750 ENCFF158AFC HiSeq 2000 2016-05-06T18:03:06.293010+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqj7j036986q4kkQ2Q0Kxb ENCSR931XLP https://www.encodeproject.org/experiments/ENCSR931XLP control Control-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF337WHA https://www.encodeproject.org/files/ENCFF337WHA/@@download/ENCFF337WHA.bam ENCFF856RZO https://www.encodeproject.org/files/ENCFF856RZO/@@download/ENCFF856RZO.bam 34.2 M 0 32.9 M 0.960 SE 50 50 None 0.0 M 26.1 M 25.4 M 0.742 0.98 0.98 50.83 80 1.03 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1ab5589-f38a-49af-a02f-e42577314ad4/@@download/cross_correlation_plot/ENCFF123QZN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB236NVK richard-myers:SL89751 ENCFF123QZN HiSeq 2000 2016-05-06T18:03:47.340003+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqjz803691Q4QQpZ2q8Bzp ENCSR324RCI https://www.encodeproject.org/experiments/ENCSR324RCI transcription factor FOXA1-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF953HVZ https://www.encodeproject.org/files/ENCFF953HVZ/@@download/ENCFF953HVZ.bam ENCFF097OZJ https://www.encodeproject.org/files/ENCFF097OZJ/@@download/ENCFF097OZJ.bam 37.6 M 0 36.9 M 0.980 SE 50 50 native 0.0 M 30.8 M 28.6 M 0.760 0.93 0.94 15.67 150 1.08 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/1a6abc2b-b6ab-4113-bbff-41b393e0dbf5/@@download/cross_correlation_plot/ENCFF457HUL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB619XUD richard-myers:SL85877 ENCFF457HUL HiSeq 2000 2017-01-25T20:33:36.341762+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K95Q03690448p9JQzZp8X ENCSR324RCI https://www.encodeproject.org/experiments/ENCSR324RCI transcription factor FOXA1-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF455DUC https://www.encodeproject.org/files/ENCFF455DUC/@@download/ENCFF455DUC.bam ENCFF272WZR https://www.encodeproject.org/files/ENCFF272WZR/@@download/ENCFF272WZR.bam 32.1 M 0 28.7 M 0.892 SE 50 50 native 0.0 M 23.9 M 17.4 M 0.541 0.76 0.76 4.17 165 1.04 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/e9d3486b-b64c-4a08-b241-641e1175bf51/@@download/cross_correlation_plot/ENCFF249BHU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB536LGP richard-myers:SL90894 ENCFF249BHU HiSeq 2000 2017-01-25T20:33:03.458334+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB28036937yFgPVXB72qj ENCSR735KEY https://www.encodeproject.org/experiments/ENCSR735KEY transcription factor FOXA1-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF395OWK https://www.encodeproject.org/files/ENCFF395OWK/@@download/ENCFF395OWK.bam ENCFF956ULJ https://www.encodeproject.org/files/ENCFF956ULJ/@@download/ENCFF956ULJ.bam 43.8 M 0 42.9 M 0.980 SE 50 50 native 0.0 M 35.1 M 33.3 M 0.760 0.95 0.95 22.21 105 1.03 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab383001-3ce4-461e-bef1-fe5a980b5a71/@@download/cross_correlation_plot/ENCFF765EAP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB602DKY richard-myers:SL97205 ENCFF765EAP HiSeq 2000 2017-01-25T20:33:29.144033+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9Bj036948gp55VK04ykp ENCSR735KEY https://www.encodeproject.org/experiments/ENCSR735KEY transcription factor FOXA1-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF044HXX https://www.encodeproject.org/files/ENCFF044HXX/@@download/ENCFF044HXX.bam ENCFF515FHW https://www.encodeproject.org/files/ENCFF515FHW/@@download/ENCFF515FHW.bam 32.4 M 0 31.1 M 0.960 SE 50 50 native 0.0 M 25.3 M 24.2 M 0.746 0.96 0.96 28.02 90 1.05 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/93f1472c-36da-4b1e-8563-9afbd731a631/@@download/cross_correlation_plot/ENCFF945VNK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB010AEL richard-myers:SL89741 ENCFF945VNK HiSeq 2000 2017-01-25T20:33:24.980419+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB2803698k6J89757FY6g ENCSR080XEY https://www.encodeproject.org/experiments/ENCSR080XEY transcription factor FOXA2-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF648XID https://www.encodeproject.org/files/ENCFF648XID/@@download/ENCFF648XID.bam ENCFF002ZVX https://www.encodeproject.org/files/ENCFF002ZVX/@@download/ENCFF002ZVX.bam 25.2 M 0 21.0 M 0.835 SE 50 50 native 0.0 M 17.2 M 12.7 M 0.505 0.77 0.77 4.32 160 1.07 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/04886a43-eede-41c4-832e-89abcb049db4/@@download/cross_correlation_plot/ENCFF432PVW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB437TOV richard-myers:SL90893 ENCFF432PVW HiSeq 2000 2017-01-25T20:32:52.706931+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K99j0369JfyJjG08Y0b7p ENCSR080XEY https://www.encodeproject.org/experiments/ENCSR080XEY transcription factor FOXA2-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF943YXO https://www.encodeproject.org/files/ENCFF943YXO/@@download/ENCFF943YXO.bam ENCFF858DYE https://www.encodeproject.org/files/ENCFF858DYE/@@download/ENCFF858DYE.bam 24.6 M 0 24.1 M 0.982 SE 50 50 native 0.0 M 20.1 M 18.4 M 0.747 0.92 0.92 13.50 140 1.34 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/83020858-6680-44c6-86e9-449922bd2f4f/@@download/cross_correlation_plot/ENCFF360HUQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB139RRF richard-myers:SL85876 ENCFF360HUQ HiSeq 2000 2017-01-25T20:32:59.218489+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBB803698k6J89757FY70 ENCSR310NYI https://www.encodeproject.org/experiments/ENCSR310NYI transcription factor FOXA2-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF847XNM https://www.encodeproject.org/files/ENCFF847XNM/@@download/ENCFF847XNM.bam ENCFF924NOS https://www.encodeproject.org/files/ENCFF924NOS/@@download/ENCFF924NOS.bam 42.2 M 0 41.3 M 0.979 SE 50 50 native 0.0 M 33.8 M 32.0 M 0.757 0.96 0.96 23.58 115 1.07 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ce82370-8c1b-47f2-88df-26f0ccf3a73a/@@download/cross_correlation_plot/ENCFF269CGY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB962GKZ richard-myers:SL93956 ENCFF269CGY HiSeq 2000 2017-01-25T20:33:39.271550+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9600369192FJ8V9vk3qq ENCSR310NYI https://www.encodeproject.org/experiments/ENCSR310NYI transcription factor FOXA2-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF855ZLU https://www.encodeproject.org/files/ENCFF855ZLU/@@download/ENCFF855ZLU.bam ENCFF471SKP https://www.encodeproject.org/files/ENCFF471SKP/@@download/ENCFF471SKP.bam 35.0 M 0 34.3 M 0.979 SE 50 50 native 0.0 M 28.2 M 26.9 M 0.767 0.96 0.96 25.74 135 1.05 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/2dd8d32f-608a-4a3f-b83c-a1c113a348cf/@@download/cross_correlation_plot/ENCFF296CSX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB584XSP richard-myers:SL87913 ENCFF296CSX HiSeq 2000 2017-01-25T20:33:33.556201+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB200369345F196JqzXJf ENCSR038GMB https://www.encodeproject.org/experiments/ENCSR038GMB transcription factor GABPA-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF632BNR https://www.encodeproject.org/files/ENCFF632BNR/@@download/ENCFF632BNR.bam ENCFF009IDY https://www.encodeproject.org/files/ENCFF009IDY/@@download/ENCFF009IDY.bam 35.4 M 0 34.5 M 0.977 SE 50 50 native 0.0 M 29.0 M 25.7 M 0.728 0.90 0.93 16.65 175 1.33 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e15a944-524f-423f-9db3-04d3d2192709/@@download/cross_correlation_plot/ENCFF039EYW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB128AHN richard-myers:SL90899 ENCFF039EYW HiSeq 2000 2017-01-25T20:33:35.259402+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K8Q80369424qKP3Yf7xZ1 ENCSR038GMB https://www.encodeproject.org/experiments/ENCSR038GMB transcription factor GABPA-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF417QDU https://www.encodeproject.org/files/ENCFF417QDU/@@download/ENCFF417QDU.bam ENCFF177GCV https://www.encodeproject.org/files/ENCFF177GCV/@@download/ENCFF177GCV.bam 27.6 M 0 27.0 M 0.975 SE 50 50 native 0.0 M 22.4 M 20.8 M 0.752 0.94 0.95 21.08 160 1.23 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/2302992f-576f-4d5f-ab32-8f86ccca656f/@@download/cross_correlation_plot/ENCFF888RXZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB548MJV richard-myers:SL87910 ENCFF888RXZ HiSeq 2000 2017-01-25T20:33:33.778006+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9vQ03698QpV9GZ8q5Jp7 ENCSR350ORK https://www.encodeproject.org/experiments/ENCSR350ORK transcription factor GABPA-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF965BTP https://www.encodeproject.org/files/ENCFF965BTP/@@download/ENCFF965BTP.bam ENCFF794KUE https://www.encodeproject.org/files/ENCFF794KUE/@@download/ENCFF794KUE.bam 36.2 M 0 35.2 M 0.970 SE 50 50 native 0.0 M 29.5 M 25.1 M 0.693 0.87 0.87 7.50 165 1.12 1.67 https://www.encodeproject.org/chipseq-filter-quality-metrics/dfea87b7-c0fc-46c6-bcc5-4b5369542c0c/@@download/cross_correlation_plot/ENCFF237FXB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB132FIG richard-myers:SL85873 ENCFF237FXB HiSeq 2000 2017-01-25T20:34:03.948361+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9Zj03695JvXVBgKgJgVf ENCSR350ORK https://www.encodeproject.org/experiments/ENCSR350ORK transcription factor GABPA-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF872UEY https://www.encodeproject.org/files/ENCFF872UEY/@@download/ENCFF872UEY.bam ENCFF479MXG https://www.encodeproject.org/files/ENCFF479MXG/@@download/ENCFF479MXG.bam 56.7 M 0 49.5 M 0.874 SE 50 50 native 0.0 M 41.6 M 29.2 M 0.516 0.72 0.73 3.63 100 1.13 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/aff96626-25e2-410d-943a-aab9b7dc850a/@@download/cross_correlation_plot/ENCFF214CAS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB416XPE richard-myers:SL89746 ENCFF214CAS HiSeq 2000 2017-01-25T20:33:54.250879+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBKQ0369F2pz096jxpgBG ENCSR445QRF https://www.encodeproject.org/experiments/ENCSR445QRF transcription factor HNF4A-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF658AIS https://www.encodeproject.org/files/ENCFF658AIS/@@download/ENCFF658AIS.bam ENCFF417XGQ https://www.encodeproject.org/files/ENCFF417XGQ/@@download/ENCFF417XGQ.bam 41.4 M 0 40.5 M 0.979 SE 50 50 native 0.0 M 35.0 M 29.2 M 0.705 0.85 0.87 8.21 170 1.80 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/ea6517b6-f83d-46d6-815c-1b064cbe6e4f/@@download/cross_correlation_plot/ENCFF435TOG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB105DUQ richard-myers:SL85872 ENCFF435TOG HiSeq 2000 2017-01-25T20:33:39.772920+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9KQ0369JfyJjG08Y0b82 ENCSR445QRF https://www.encodeproject.org/experiments/ENCSR445QRF transcription factor HNF4A-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF058OZQ https://www.encodeproject.org/files/ENCFF058OZQ/@@download/ENCFF058OZQ.bam ENCFF172NQP https://www.encodeproject.org/files/ENCFF172NQP/@@download/ENCFF172NQP.bam 29.7 M 0 28.1 M 0.949 SE 50 50 native 0.0 M 24.6 M 20.4 M 0.688 0.84 0.87 8.60 130 2.38 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9ecafb9-9463-4f3c-97c2-dc16e48c7d0b/@@download/cross_correlation_plot/ENCFF366KUG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB074WPQ richard-myers:SL89745 ENCFF366KUG HiSeq 2000 2017-01-25T20:33:01.488069+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBB0036937yFgPVXB72v7 ENCSR601OGE https://www.encodeproject.org/experiments/ENCSR601OGE transcription factor HNF4A-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF479OYS https://www.encodeproject.org/files/ENCFF479OYS/@@download/ENCFF479OYS.bam ENCFF677IWP https://www.encodeproject.org/files/ENCFF677IWP/@@download/ENCFF677IWP.bam 29.7 M 0 29.1 M 0.977 SE 50 50 native 0.0 M 25.4 M 20.9 M 0.703 0.84 0.85 7.20 150 2.30 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/6c4d885c-55ac-4130-ac59-6843d986d548/@@download/cross_correlation_plot/ENCFF302XOK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB201OJR richard-myers:SL85884 ENCFF302XOK HiSeq 2000 2017-01-25T20:33:26.687438+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K8xj0369671qK8VPqV9P0 ENCSR601OGE https://www.encodeproject.org/experiments/ENCSR601OGE transcription factor HNF4A-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF864EDI https://www.encodeproject.org/files/ENCFF864EDI/@@download/ENCFF864EDI.bam ENCFF002OXS https://www.encodeproject.org/files/ENCFF002OXS/@@download/ENCFF002OXS.bam 64.8 M 0 63.2 M 0.974 SE 50 50 native 0.0 M 53.9 M 45.3 M 0.699 0.85 0.89 10.74 135 1.52 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/210f3860-1616-4a77-a09c-8629bedc90dd/@@download/cross_correlation_plot/ENCFF500ZBE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB015ADX richard-myers:SL90898 ENCFF500ZBE HiSeq 2000 2017-01-26T00:22:29.395796+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9vQ0369582Fy8xp7XpbP ENCSR297GII https://www.encodeproject.org/experiments/ENCSR297GII transcription factor HNF4G-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF879HPF https://www.encodeproject.org/files/ENCFF879HPF/@@download/ENCFF879HPF.bam ENCFF922CEN https://www.encodeproject.org/files/ENCFF922CEN/@@download/ENCFF922CEN.bam 42.6 M 0 41.7 M 0.978 SE 50 50 native 0.0 M 34.2 M 32.6 M 0.766 0.96 0.96 25.24 110 1.05 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca1574bb-cb54-45d3-88d3-0bb09ac186d3/@@download/cross_correlation_plot/ENCFF664SNF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB418CNI richard-myers:SL90891 ENCFF664SNF HiSeq 2000 2016-10-09T17:02:11.257261+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6P380jv1bJQB62j8VV6Q5 ENCSR297GII https://www.encodeproject.org/experiments/ENCSR297GII transcription factor HNF4G-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF232XTK https://www.encodeproject.org/files/ENCFF232XTK/@@download/ENCFF232XTK.bam ENCFF688KRR https://www.encodeproject.org/files/ENCFF688KRR/@@download/ENCFF688KRR.bam 40.9 M 0 40.0 M 0.978 SE 50 50 native 0.0 M 33.1 M 31.1 M 0.761 0.95 0.95 19.41 130 1.05 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/9354f6a7-dff2-4cc1-99eb-ba709e578153/@@download/cross_correlation_plot/ENCFF745TQE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB995PTO richard-myers:SL85874 ENCFF745TQE HiSeq 2000 2016-10-09T17:01:56.131113+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv6P580jv1q5825v91XY338 ENCSR196HGZ https://www.encodeproject.org/experiments/ENCSR196HGZ transcription factor JUND-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF459VZA https://www.encodeproject.org/files/ENCFF459VZA/@@download/ENCFF459VZA.bam ENCFF077SLL https://www.encodeproject.org/files/ENCFF077SLL/@@download/ENCFF077SLL.bam 39.8 M 0 38.5 M 0.969 SE 50 50 native 0.0 M 32.0 M 29.8 M 0.749 0.94 0.94 17.87 150 1.06 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/df3411eb-c6e0-482a-9680-9e3a6361cffc/@@download/cross_correlation_plot/ENCFF689WAA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB963MCA richard-myers:SL85860 ENCFF689WAA HiSeq 2000 2017-01-25T20:34:00.016048+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9q80369JfyJjG08Y0b8b ENCSR196HGZ https://www.encodeproject.org/experiments/ENCSR196HGZ transcription factor JUND-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF896BMA https://www.encodeproject.org/files/ENCFF896BMA/@@download/ENCFF896BMA.bam ENCFF032LDQ https://www.encodeproject.org/files/ENCFF032LDQ/@@download/ENCFF032LDQ.bam 40.8 M 0 39.5 M 0.967 SE 50 50 native 0.0 M 32.8 M 29.8 M 0.729 0.91 0.91 11.44 165 1.03 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/c54531a7-8209-4bdb-b443-988dad166204/@@download/cross_correlation_plot/ENCFF972ZUD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB141FDU richard-myers:SL77456 ENCFF972ZUD HiSeq 2000 2017-01-25T20:34:12.379254+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBgQ0369F2pz096jxpgBb ENCSR837GTK https://www.encodeproject.org/experiments/ENCSR837GTK transcription factor JUND-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF641PXS https://www.encodeproject.org/files/ENCFF641PXS/@@download/ENCFF641PXS.bam ENCFF695SMU https://www.encodeproject.org/files/ENCFF695SMU/@@download/ENCFF695SMU.bam 40.1 M 0 38.6 M 0.964 SE 50 50 native 0.0 M 32.2 M 29.4 M 0.734 0.93 0.93 14.19 155 1.09 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/3accf839-354e-43f5-8521-af3b5bd6b405/@@download/cross_correlation_plot/ENCFF215GBK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB373PCE richard-myers:SL85868 ENCFF215GBK HiSeq 2000 2017-01-25T20:33:35.692977+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9xQ03695ZBFgGYGy9pjj ENCSR837GTK https://www.encodeproject.org/experiments/ENCSR837GTK transcription factor JUND-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF861AOO https://www.encodeproject.org/files/ENCFF861AOO/@@download/ENCFF861AOO.bam ENCFF804TUA https://www.encodeproject.org/files/ENCFF804TUA/@@download/ENCFF804TUA.bam 30.3 M 0 28.2 M 0.932 SE 50 50 native 0.0 M 23.4 M 21.2 M 0.698 0.91 0.91 11.40 130 1.09 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/3680400a-5b67-42eb-84bc-35d2eb71123e/@@download/cross_correlation_plot/ENCFF978CPC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB932PIY richard-myers:SL89740 ENCFF978CPC HiSeq 2000 2017-01-25T20:33:27.080127+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBpQ036902FqZ27Zbbzqy ENCSR521IID https://www.encodeproject.org/experiments/ENCSR521IID transcription factor MAX-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF499VEN https://www.encodeproject.org/files/ENCFF499VEN/@@download/ENCFF499VEN.bam ENCFF254XNM https://www.encodeproject.org/files/ENCFF254XNM/@@download/ENCFF254XNM.bam 44.0 M 0 42.0 M 0.955 SE 50 50 native 0.0 M 34.6 M 31.7 M 0.720 0.93 0.93 13.74 175 1.09 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ab249f0-a647-4c56-998c-39860e937ebf/@@download/cross_correlation_plot/ENCFF988XKO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB802SIR richard-myers:SL77679 ENCFF988XKO HiSeq 2000 2017-01-25T20:33:31.939677+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9fQ03698k6J89757FY65 ENCSR521IID https://www.encodeproject.org/experiments/ENCSR521IID transcription factor MAX-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF376QOH https://www.encodeproject.org/files/ENCFF376QOH/@@download/ENCFF376QOH.bam ENCFF272XYT https://www.encodeproject.org/files/ENCFF272XYT/@@download/ENCFF272XYT.bam 68.4 M 0 66.2 M 0.967 SE 50 50 native 0.0 M 54.2 M 49.9 M 0.729 0.94 0.94 15.68 135 1.04 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/53152116-a49a-4e2b-aa3d-a67c1cc7c5de/@@download/cross_correlation_plot/ENCFF573BXF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB188XWI richard-myers:SL87909 ENCFF573BXF HiSeq 2000 2017-01-26T00:22:28.715454+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBQ803695KX5x274GxPZk ENCSR847DIT https://www.encodeproject.org/experiments/ENCSR847DIT transcription factor MAX-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF777LFU https://www.encodeproject.org/files/ENCFF777LFU/@@download/ENCFF777LFU.bam ENCFF716ZAN https://www.encodeproject.org/files/ENCFF716ZAN/@@download/ENCFF716ZAN.bam 37.1 M 0 35.7 M 0.962 SE 50 50 native 0.0 M 29.1 M 27.5 M 0.742 0.95 0.95 21.38 140 1.06 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/76ed7450-df72-4333-953a-b1b770dbbca7/@@download/cross_correlation_plot/ENCFF546JVU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB345UMT richard-myers:SL77678 ENCFF546JVU HiSeq 2000 2017-01-25T20:33:44.098866+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9980369424qKP3Yf7xb4 ENCSR847DIT https://www.encodeproject.org/experiments/ENCSR847DIT transcription factor MAX-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF661JYQ https://www.encodeproject.org/files/ENCFF661JYQ/@@download/ENCFF661JYQ.bam ENCFF935CYM https://www.encodeproject.org/files/ENCFF935CYM/@@download/ENCFF935CYM.bam 38.0 M 0 37.0 M 0.974 SE 50 50 native 0.0 M 30.6 M 29.1 M 0.766 0.96 0.96 26.31 155 1.10 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/74df85dd-f435-4713-a89f-63cc14d1466f/@@download/cross_correlation_plot/ENCFF934JOM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB839XAG richard-myers:SL85857 ENCFF934JOM HiSeq 2000 2017-01-25T20:33:05.836880+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KBXj03693Jf2v97QJ7bBX ENCSR168SMX https://www.encodeproject.org/experiments/ENCSR168SMX transcription factor NR2F2-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF866YKI https://www.encodeproject.org/files/ENCFF866YKI/@@download/ENCFF866YKI.bam ENCFF160AUQ https://www.encodeproject.org/files/ENCFF160AUQ/@@download/ENCFF160AUQ.bam 38.0 M 0 36.3 M 0.955 SE 50 50 native 0.0 M 30.0 M 27.1 M 0.714 0.91 0.91 11.30 175 1.11 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a0b38cd-0a24-4911-8620-4a7fada5a09f/@@download/cross_correlation_plot/ENCFF712JVW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB255FWI richard-myers:SL77680 ENCFF712JVW HiSeq 2000 2016-10-09T17:34:16.055941+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4YqQ0jv1xPyfX78Yz4jK2 ENCSR168SMX https://www.encodeproject.org/experiments/ENCSR168SMX transcription factor NR2F2-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF263YXM https://www.encodeproject.org/files/ENCFF263YXM/@@download/ENCFF263YXM.bam ENCFF756TFV https://www.encodeproject.org/files/ENCFF756TFV/@@download/ENCFF756TFV.bam 45.7 M 0 44.5 M 0.973 SE 50 50 native 0.0 M 37.0 M 33.9 M 0.743 0.93 0.93 14.60 145 1.09 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/65fd2fe6-222f-4fd1-bda3-2048319d0f0e/@@download/cross_correlation_plot/ENCFF407SOA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB956CFN richard-myers:SL85855 ENCFF407SOA HiSeq 2000 2016-10-09T17:34:28.306576+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Yx00jv1XvFGkBjjfjQqk ENCSR338MMB https://www.encodeproject.org/experiments/ENCSR338MMB transcription factor NR2F2-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF490SKM https://www.encodeproject.org/files/ENCFF490SKM/@@download/ENCFF490SKM.bam ENCFF222VHU https://www.encodeproject.org/files/ENCFF222VHU/@@download/ENCFF222VHU.bam 45.4 M 0 42.3 M 0.932 SE 50 50 native 0.0 M 35.2 M 30.6 M 0.674 0.88 0.88 8.39 120 1.06 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/bbc3859e-c2e1-4df0-b7e3-a3ce0d9a8fae/@@download/cross_correlation_plot/ENCFF182FSV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB232FJZ richard-myers:SL89739 ENCFF182FSV HiSeq 2000 2016-10-09T17:09:45.469575+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bY80jv1QxJBfj5Zb2p9b ENCSR338MMB https://www.encodeproject.org/experiments/ENCSR338MMB transcription factor NR2F2-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF233KNQ https://www.encodeproject.org/files/ENCFF233KNQ/@@download/ENCFF233KNQ.bam ENCFF153WUK https://www.encodeproject.org/files/ENCFF153WUK/@@download/ENCFF153WUK.bam 21.6 M 0 20.8 M 0.963 SE 50 50 native 0.0 M 17.3 M 16.2 M 0.749 0.95 0.95 18.28 150 1.12 1.41 https://www.encodeproject.org/chipseq-filter-quality-metrics/f331d763-c3ff-4fbb-abc0-76a1658fc805/@@download/cross_correlation_plot/ENCFF264HRE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB733SOT richard-myers:SL85863 ENCFF264HRE HiSeq 2000 2016-10-09T17:08:28.233632+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3bZj0jv1XYYX2Fxk3f4VQ ENCSR230ZWH https://www.encodeproject.org/experiments/ENCSR230ZWH transcription factor RAD21-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF232KLY https://www.encodeproject.org/files/ENCFF232KLY/@@download/ENCFF232KLY.bam ENCFF049UHF https://www.encodeproject.org/files/ENCFF049UHF/@@download/ENCFF049UHF.bam 65.2 M 0 62.3 M 0.956 SE 50 50 native 0.0 M 54.0 M 44.6 M 0.685 0.84 0.88 10.89 130 1.62 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf7d9763-e3b2-4c31-9818-b6f93e5f468e/@@download/cross_correlation_plot/ENCFF164ZCN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB388LGU richard-myers:SL101253 ENCFF164ZCN HiSeq 2000 2016-10-09T17:01:00.690582+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44Qj0jv1zBYbxYJ5zzz9X ENCSR230ZWH https://www.encodeproject.org/experiments/ENCSR230ZWH transcription factor RAD21-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF285HJN https://www.encodeproject.org/files/ENCFF285HJN/@@download/ENCFF285HJN.bam ENCFF051AWW https://www.encodeproject.org/files/ENCFF051AWW/@@download/ENCFF051AWW.bam 70.2 M 0 67.9 M 0.968 SE 50 50 native 0.0 M 59.6 M 48.2 M 0.687 0.82 0.87 10.03 150 1.66 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/9084b489-71fc-468d-8b27-95adcd38453c/@@download/cross_correlation_plot/ENCFF671BGZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB348KKR richard-myers:SL101254 ENCFF671BGZ HiSeq 2000 2016-10-09T17:00:52.419162+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv44X80jv1XvFGkBjjfjQBq ENCSR917QNE https://www.encodeproject.org/experiments/ENCSR917QNE transcription factor RAD21-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF910WTA https://www.encodeproject.org/files/ENCFF910WTA/@@download/ENCFF910WTA.bam ENCFF916RJA https://www.encodeproject.org/files/ENCFF916RJA/@@download/ENCFF916RJA.bam 67.5 M 0 64.6 M 0.957 SE 50 50 native 0.0 M 56.2 M 45.0 M 0.668 0.82 0.85 7.73 160 1.57 1.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/b4389ddb-20e4-4f57-815a-bce68687c8eb/@@download/cross_correlation_plot/ENCFF643ZXX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB531GUI richard-myers:SL101255 ENCFF643ZXX HiSeq 2000 2016-10-09T17:05:36.602358+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4JYj0jv1XvFGkBjjfjQbK ENCSR917QNE https://www.encodeproject.org/experiments/ENCSR917QNE transcription factor RAD21-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF445BCF https://www.encodeproject.org/files/ENCFF445BCF/@@download/ENCFF445BCF.bam ENCFF991TKR https://www.encodeproject.org/files/ENCFF991TKR/@@download/ENCFF991TKR.bam 68.9 M 0 65.7 M 0.953 SE 50 50 native 0.0 M 56.2 M 46.1 M 0.669 0.84 0.85 7.21 155 1.36 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/209d102a-ac8c-48b9-836b-7d019b43ffc8/@@download/cross_correlation_plot/ENCFF171UDL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB486MDZ richard-myers:SL101256 ENCFF171UDL HiSeq 2000 2016-10-09T17:05:38.890970+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Jb80jv1xPyfX78Yz4j85 ENCSR867WPH https://www.encodeproject.org/experiments/ENCSR867WPH "transcription factor,chromatin remodeller" REST-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF180KHA https://www.encodeproject.org/files/ENCFF180KHA/@@download/ENCFF180KHA.bam ENCFF862SKN https://www.encodeproject.org/files/ENCFF862SKN/@@download/ENCFF862SKN.bam 52.3 M 0 49.3 M 0.942 SE 50 50 native 0.0 M 40.3 M 36.3 M 0.694 0.92 0.93 16.12 125 1.13 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/0c43d07c-4726-47a7-9da1-48409d6887ce/@@download/cross_correlation_plot/ENCFF570BZB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB630CLJ richard-myers:SL93434 ENCFF570BZB HiSeq 2000 2017-01-25T20:34:18.011251+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9280369424qKP3Yf7xZQ ENCSR867WPH https://www.encodeproject.org/experiments/ENCSR867WPH "transcription factor,chromatin remodeller" REST-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF770RPH https://www.encodeproject.org/files/ENCFF770RPH/@@download/ENCFF770RPH.bam ENCFF628WUT https://www.encodeproject.org/files/ENCFF628WUT/@@download/ENCFF628WUT.bam 40.9 M 0 37.1 M 0.907 SE 50 50 native 0.0 M 30.7 M 25.0 M 0.612 0.83 0.84 6.11 120 1.15 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec9537f8-b72d-49a0-abb9-32232d9f498c/@@download/cross_correlation_plot/ENCFF921ZXR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB956RVH richard-myers:SL89742 ENCFF921ZXR HiSeq 2000 2017-01-25T20:34:06.499477+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K9Q0036937yFgPVXB72q0 ENCSR893QWP https://www.encodeproject.org/experiments/ENCSR893QWP "transcription factor,chromatin remodeller" REST-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF719VXT https://www.encodeproject.org/files/ENCFF719VXT/@@download/ENCFF719VXT.bam ENCFF358INR https://www.encodeproject.org/files/ENCFF358INR/@@download/ENCFF358INR.bam 21.8 M 0 21.3 M 0.975 SE 50 50 native 0.0 M 17.9 M 16.4 M 0.752 0.92 0.93 16.02 135 1.26 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/050a89e7-0ed5-4822-a4a9-92ad7ecae57d/@@download/cross_correlation_plot/ENCFF486HCN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB478LYF richard-myers:SL90895 ENCFF486HCN HiSeq 2000 2017-01-25T20:32:44.264694+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K99803690448p9JQzZp8f ENCSR893QWP https://www.encodeproject.org/experiments/ENCSR893QWP "transcription factor,chromatin remodeller" REST-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF281SWL https://www.encodeproject.org/files/ENCFF281SWL/@@download/ENCFF281SWL.bam ENCFF984RIM https://www.encodeproject.org/files/ENCFF984RIM/@@download/ENCFF984RIM.bam 31.2 M 0 30.4 M 0.972 SE 50 50 native 0.0 M 25.6 M 22.0 M 0.703 0.87 0.88 8.36 175 1.20 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a7106db-3da2-4f4a-aa1e-7a090f788aaa/@@download/cross_correlation_plot/ENCFF698SDI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB085OZB richard-myers:SL85880 ENCFF698SDI HiSeq 2000 2017-01-25T20:33:33.914514+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24KB6Q0369F2pz096jxpg9v ENCSR016BMM https://www.encodeproject.org/experiments/ENCSR016BMM transcription factor TAF1-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF661OJT https://www.encodeproject.org/files/ENCFF661OJT/@@download/ENCFF661OJT.bam ENCFF032LOP https://www.encodeproject.org/files/ENCFF032LOP/@@download/ENCFF032LOP.bam 38.8 M 0 37.8 M 0.974 SE 50 50 native 0.0 M 31.5 M 28.6 M 0.737 0.92 0.92 11.98 110 1.05 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a49e883-3c72-4060-a734-fe82cf81ea80/@@download/cross_correlation_plot/ENCFF572ILR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB866RYJ richard-myers:SL90892 ENCFF572ILR HiSeq 2000 2017-01-25T20:33:25.628239+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K8J003698k8BZGpKx02v4 ENCSR016BMM https://www.encodeproject.org/experiments/ENCSR016BMM transcription factor TAF1-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF007QLT https://www.encodeproject.org/files/ENCFF007QLT/@@download/ENCFF007QLT.bam ENCFF123EQA https://www.encodeproject.org/files/ENCFF123EQA/@@download/ENCFF123EQA.bam 31.4 M 0 30.6 M 0.972 SE 50 50 native 0.0 M 25.6 M 22.1 M 0.703 0.88 0.88 7.84 130 1.06 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/7305a44e-1948-4d6d-9de9-169d0d85a8e1/@@download/cross_correlation_plot/ENCFF946YUW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB231OHF richard-myers:SL85875 ENCFF946YUW HiSeq 2000 2017-01-25T20:33:13.311294+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F24K8y00369528x8PvjjPp1b ENCSR382MOM https://www.encodeproject.org/experiments/ENCSR382MOM transcription factor YY1-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF475YAS https://www.encodeproject.org/files/ENCFF475YAS/@@download/ENCFF475YAS.bam ENCFF488ZUW https://www.encodeproject.org/files/ENCFF488ZUW/@@download/ENCFF488ZUW.bam 32.9 M 0 31.5 M 0.958 SE 50 50 native 0.0 M 26.5 M 23.1 M 0.702 0.88 0.90 9.87 225 1.27 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/126ee92a-fb9a-4488-9618-7130f910a6b4/@@download/cross_correlation_plot/ENCFF244DVW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB191LVF richard-myers:SL77457 ENCFF244DVW HiSeq 2000 2016-10-09T17:01:10.758241+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48K80jv1XYYX2Fxk3f57V ENCSR382MOM https://www.encodeproject.org/experiments/ENCSR382MOM transcription factor YY1-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF168KFH https://www.encodeproject.org/files/ENCFF168KFH/@@download/ENCFF168KFH.bam ENCFF388IBA https://www.encodeproject.org/files/ENCFF388IBA/@@download/ENCFF388IBA.bam 40.9 M 0 39.3 M 0.960 SE 50 50 native 0.0 M 33.2 M 30.0 M 0.732 0.92 0.93 15.55 130 1.29 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/03f157be-0a21-470f-b648-ed1222232459/@@download/cross_correlation_plot/ENCFF634YGY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB273ORN richard-myers:SL85864 ENCFF634YGY HiSeq 2000 2016-10-09T17:01:46.701580+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv48PQ0jv1g5yGjfvVx0P2v ENCSR994YLZ https://www.encodeproject.org/experiments/ENCSR994YLZ transcription factor YY1-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF550RLX https://www.encodeproject.org/files/ENCFF550RLX/@@download/ENCFF550RLX.bam ENCFF525UUL https://www.encodeproject.org/files/ENCFF525UUL/@@download/ENCFF525UUL.bam 21.9 M 0 21.6 M 0.984 SE 50 50 native 0.0 M 18.2 M 17.0 M 0.775 0.94 0.95 20.30 160 1.28 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/e5b917b9-c18b-40e6-a6c6-d3d2964a3246/@@download/cross_correlation_plot/ENCFF188ZYE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB997DAV richard-myers:SL85856 ENCFF188ZYE HiSeq 2000 2016-10-09T16:59:02.786087+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4GJ00jv1QxJBfj5Zb2pz0 ENCSR994YLZ https://www.encodeproject.org/experiments/ENCSR994YLZ transcription factor YY1-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF686NVV https://www.encodeproject.org/files/ENCFF686NVV/@@download/ENCFF686NVV.bam ENCFF028ZVJ https://www.encodeproject.org/files/ENCFF028ZVJ/@@download/ENCFF028ZVJ.bam 35.1 M 0 33.7 M 0.960 SE 50 50 native 0.0 M 28.2 M 25.2 M 0.718 0.91 0.91 11.82 150 1.15 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/04d0dd10-6808-47b6-862c-26788db16978/@@download/cross_correlation_plot/ENCFF769ICW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB638SGS richard-myers:SL77691 ENCFF769ICW HiSeq 2000 2016-10-09T16:59:41.761616+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4GKQ0jv1XYYX2Fxk3f5G7 ENCSR345YWJ https://www.encodeproject.org/experiments/ENCSR345YWJ transcription factor ZBTB33-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF993WWR https://www.encodeproject.org/files/ENCFF993WWR/@@download/ENCFF993WWR.bam ENCFF290DDY https://www.encodeproject.org/files/ENCFF290DDY/@@download/ENCFF290DDY.bam 23.6 M 0 22.4 M 0.948 SE 50 50 native 0.0 M 18.2 M 17.3 M 0.733 0.97 0.97 31.94 150 1.07 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/66a916a6-b35b-4686-a975-8a77e561a465/@@download/cross_correlation_plot/ENCFF245KJA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB406XPK richard-myers:SL77688 ENCFF245KJA HiSeq 2000 2016-10-09T17:06:31.088532+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67xj0jv1XpBpGXQxqxYKq ENCSR345YWJ https://www.encodeproject.org/experiments/ENCSR345YWJ transcription factor ZBTB33-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF209PBB https://www.encodeproject.org/files/ENCFF209PBB/@@download/ENCFF209PBB.bam ENCFF280NHI https://www.encodeproject.org/files/ENCFF280NHI/@@download/ENCFF280NHI.bam 40.2 M 0 39.0 M 0.971 SE 50 50 native 0.0 M 31.8 M 29.6 M 0.736 0.95 0.95 22.69 155 1.06 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/4986dcac-c667-4e57-a11f-db5afc8fd085/@@download/cross_correlation_plot/ENCFF751TBY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB899UYG richard-myers:SL85859 ENCFF751TBY HiSeq 2000 2016-10-09T17:06:46.036491+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv67zQ0jv1b6Q2yZ51Zb5Xf ENCSR516HUP https://www.encodeproject.org/experiments/ENCSR516HUP transcription factor ZBTB33-human liver tissue 1 richard-myers ENCODE3 GRCh38 ENCFF528ZOZ https://www.encodeproject.org/files/ENCFF528ZOZ/@@download/ENCFF528ZOZ.bam ENCFF834QOO https://www.encodeproject.org/files/ENCFF834QOO/@@download/ENCFF834QOO.bam 41.0 M 0 39.6 M 0.967 SE 50 50 native 0.0 M 32.4 M 28.9 M 0.705 0.92 0.93 14.70 175 1.09 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d151801-4f4d-46b8-b59d-d99d6430a579/@@download/cross_correlation_plot/ENCFF776IQU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB915FOF richard-myers:SL85867 ENCFF776IQU HiSeq 2000 2016-10-09T17:33:52.962267+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bjj0jv1f60PxyZ9JGPZF ENCSR516HUP https://www.encodeproject.org/experiments/ENCSR516HUP transcription factor ZBTB33-human liver tissue 2 richard-myers ENCODE3 GRCh38 ENCFF080WHB https://www.encodeproject.org/files/ENCFF080WHB/@@download/ENCFF080WHB.bam ENCFF219BOK https://www.encodeproject.org/files/ENCFF219BOK/@@download/ENCFF219BOK.bam 33.9 M 0 32.0 M 0.946 SE 50 50 native 0.0 M 26.2 M 23.7 M 0.699 0.92 0.93 13.58 175 1.10 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/224675ec-9f7a-46d3-908b-4e4097fd022e/@@download/cross_correlation_plot/ENCFF440FTO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB477KYS richard-myers:SL77692 ENCFF440FTO HiSeq 2000 2016-10-09T17:33:48.727797+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4bp00jv1vY92b0GYjVGF1 ENCSR000BSR https://www.encodeproject.org/experiments/ENCSR000BSR transcription factor CEBPB-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000AHE https://www.encodeproject.org/experiments/ENCSR000AHE control Control-human MCF-7 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF511JFV https://www.encodeproject.org/files/ENCFF511JFV/@@download/ENCFF511JFV.bam ENCFF997HJN https://www.encodeproject.org/files/ENCFF997HJN/@@download/ENCFF997HJN.bam 33.8 M 0 31.7 M 0.939 SE 50 50 None 0.0 M 25.5 M 25.0 M 0.740 0.99 0.99 116.53 65 1.04 0.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/568e14ad-04b0-4430-a69e-24ca1001cb91/@@download/cross_correlation_plot/ENCFF000QQG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB311ZZZ richard-myers:SL16756 ENCFF000QQG HiSeq 2000 2016-05-05T16:55:00.785840+00:00 released pipeline completed https://platform.dnanexus.com/projects/BKp5K980bpZZ096Xp1XQ02fZ/monitor/analysis/BvGb8qQ0bpZgx9gxj0gj2kp2 ENCSR000AHE https://www.encodeproject.org/experiments/ENCSR000AHE control Control-human MCF-7 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF139XSQ https://www.encodeproject.org/files/ENCFF139XSQ/@@download/ENCFF139XSQ.bam ENCFF443BKA https://www.encodeproject.org/files/ENCFF443BKA/@@download/ENCFF443BKA.bam 31.1 M 0 27.9 M 0.896 SE 50 50 None 0.0 M 22.1 M 21.4 M 0.689 0.99 0.99 105.29 65 1.03 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/26c7cb2b-7b99-45cf-b289-5f8fe0376ecf/@@download/cross_correlation_plot/ENCFF000QQJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB308ZZZ richard-myers:SL16757 ENCFF000QQJ HiSeq 2000 2016-05-05T16:54:44.159333+00:00 released pipeline completed https://platform.dnanexus.com/projects/BKp5K980bpZZ096Xp1XQ02fZ/monitor/analysis/BvGb8xQ0bpZZVyzJxVPFV5ZV ENCSR000AHE https://www.encodeproject.org/experiments/ENCSR000AHE control Control-human MCF-7 immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF927WZT https://www.encodeproject.org/files/ENCFF927WZT/@@download/ENCFF927WZT.bam ENCFF154KFQ https://www.encodeproject.org/files/ENCFF154KFQ/@@download/ENCFF154KFQ.bam 30.3 M 0 27.5 M 0.907 SE 50 50 None 0.0 M 21.6 M 21.0 M 0.692 0.99 0.99 113.78 80 1.03 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/e91edcee-1855-41ff-a1a8-b435654d62eb/@@download/cross_correlation_plot/ENCFF000QQI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB307ZZZ richard-myers:SL13504 ENCFF000QQI HiSeq 2000 2016-05-05T16:54:41.900910+00:00 released pipeline completed https://platform.dnanexus.com/projects/BKp5K980bpZZ096Xp1XQ02fZ/monitor/analysis/BvGb8zj0bpZQPjv9pVP1BYF8 ENCSR000AHE https://www.encodeproject.org/experiments/ENCSR000AHE control Control-human MCF-7 immortalized cell line 4 richard-myers ENCODE2 GRCh38 ENCFF016SKS https://www.encodeproject.org/files/ENCFF016SKS/@@download/ENCFF016SKS.bam ENCFF954EQJ https://www.encodeproject.org/files/ENCFF954EQJ/@@download/ENCFF954EQJ.bam 31.9 M 0 29.8 M 0.932 SE 50 None 0.0 M 23.3 M 22.9 M 0.718 0.99 0.99 102.10 -25 1.01 0.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/a028c537-ece3-4a0d-a320-de4720096737/@@download/cross_correlation_plot/ENCFF000QQK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRG richard-myers:SL16758 ENCFF000QQK HiSeq 2000 2016-05-05T16:54:53.218963+00:00 released pipeline completed https://platform.dnanexus.com/projects/BKp5K980bpZZ096Xp1XQ02fZ/monitor/analysis/BvGb91j0bpZQPjv9pVP1BYFV ENCSR204BLL https://www.encodeproject.org/experiments/ENCSR204BLL control Control-human MCF-7 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF291JPZ https://www.encodeproject.org/files/ENCFF291JPZ/@@download/ENCFF291JPZ.bam ENCFF515ZHR https://www.encodeproject.org/files/ENCFF515ZHR/@@download/ENCFF515ZHR.bam 31.7 M 0 29.4 M 0.927 SE 50 None 0.0 M 23.3 M 22.9 M 0.725 0.99 0.99 114.18 70 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/633f0339-6270-4086-b68a-7cc3148ee3d6/@@download/cross_correlation_plot/ENCFF527ZQY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB309TMZ richard-myers:SL93446 ENCFF527ZQY HiSeq 2000 2016-05-06T18:15:12.661099+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbq84Q0369GbFx9y02x3zJQ ENCSR510ZTI https://www.encodeproject.org/experiments/ENCSR510ZTI control Control-human MCF-7 immortalized cell line 6 richard-myers ENCODE3 GRCh38 ENCFF269BJQ https://www.encodeproject.org/files/ENCFF269BJQ/@@download/ENCFF269BJQ.bam ENCFF507WOL https://www.encodeproject.org/files/ENCFF507WOL/@@download/ENCFF507WOL.bam 24.6 M 0 23.8 M 0.967 SE 50 None 0.0 M 19.5 M 19.2 M 0.781 0.99 0.99 100.31 70 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/32682f73-1267-4dd1-9322-06d3730eb4d3/@@download/cross_correlation_plot/ENCFF302DND.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB343WIQ richard-myers:SL58611 ENCFF302DND HiSeq 2000 2016-05-06T18:11:11.332937+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKZj03691Q4QQpZ2q8BYJ ENCSR511PAE https://www.encodeproject.org/experiments/ENCSR511PAE control Control-human MCF-7 immortalized cell line 7 richard-myers ENCODE3 GRCh38 ENCFF018PFX https://www.encodeproject.org/files/ENCFF018PFX/@@download/ENCFF018PFX.bam ENCFF719QWF https://www.encodeproject.org/files/ENCFF719QWF/@@download/ENCFF719QWF.bam 68.6 M 0 66.8 M 0.975 SE 50 50 None 0.0 M 55.6 M 51.4 M 0.750 0.93 0.93 14.91 100 1.02 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d4a5e79-c2dc-4145-b6f1-423aec7327c6/@@download/cross_correlation_plot/ENCFF752XCV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB734OAY richard-myers:SL58303 ENCFF752XCV HiSeq 2000 2016-05-06T18:13:31.414083+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqKfQ03692Fy2Pk02vGVPF ENCSR610GTD https://www.encodeproject.org/experiments/ENCSR610GTD control Control-human MCF-7 immortalized cell line 6 richard-myers ENCODE3 GRCh38 ENCFF667XXT https://www.encodeproject.org/files/ENCFF667XXT/@@download/ENCFF667XXT.bam ENCFF827FND https://www.encodeproject.org/files/ENCFF827FND/@@download/ENCFF827FND.bam 132.3 M 0 128.1 M 0.968 SE 50 50 None 0.0 M 103.3 M 49.8 M 0.376 0.48 0.00 0.00 75 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/a368de89-ad48-4687-9114-052626df8f11/@@download/cross_correlation_plot/ENCFF332HES-ENCFF381LXJ_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB181PNG richard-myers:SL57457 "ENCFF332HES,ENCFF381LXJ" HiSeq 2000 2016-05-06T18:12:51.356695+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqQbj0369GkFPvq42zg1j7 ENCSR759EUL https://www.encodeproject.org/experiments/ENCSR759EUL control Control-human MCF-7 immortalized cell line 5 richard-myers ENCODE3 GRCh38 ENCFF408SPL https://www.encodeproject.org/files/ENCFF408SPL/@@download/ENCFF408SPL.bam ENCFF864PPH https://www.encodeproject.org/files/ENCFF864PPH/@@download/ENCFF864PPH.bam 51.1 M 0 43.2 M 0.846 SE 50 None 0.0 M 32.5 M 31.5 M 0.616 0.98 0.98 44.61 110 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/b6867072-938f-42f1-9b35-82e19dcc0a2a/@@download/cross_correlation_plot/ENCFF570HOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB099ALY richard-myers:SL30830 ENCFF570HOL HiSeq 2000 2016-05-06T18:05:10.512523+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BvbqYpQ03691Q4QQpZ2q8BkG ENCSR838ZOW https://www.encodeproject.org/experiments/ENCSR838ZOW control Control-human MCF-7 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF183XMB https://www.encodeproject.org/files/ENCFF183XMB/@@download/ENCFF183XMB.bam ENCFF627XQE https://www.encodeproject.org/files/ENCFF627XQE/@@download/ENCFF627XQE.bam 32.0 M 0 31.3 M 0.976 SE 50 50 None 0.0 M 25.5 M 24.8 M 0.776 0.98 0.98 54.51 80 1.03 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/b5b50421-f91f-45da-a66b-8b687fa43308/@@download/cross_correlation_plot/ENCFF210JBU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB067CLD richard-myers:SL83449 ENCFF210JBU HiSeq 2000 2016-05-06T18:03:14.118949+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqfg003691Q4QQpZ2q8Bvk ENCSR924PBF https://www.encodeproject.org/experiments/ENCSR924PBF control Control-human MCF-7 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF156BNP https://www.encodeproject.org/files/ENCFF156BNP/@@download/ENCFF156BNP.bam ENCFF714VIM https://www.encodeproject.org/files/ENCFF714VIM/@@download/ENCFF714VIM.bam 30.0 M 0 29.1 M 0.972 SE 50 None 0.0 M 23.8 M 22.4 M 0.748 0.98 0.98 49.67 80 1.04 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa0489b2-a76e-4120-9287-dc266fa25330/@@download/cross_correlation_plot/ENCFF735GUP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB162ZYB richard-myers:SL93961 ENCFF735GUP HiSeq 2000 2016-05-06T18:02:50.080819+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bvbqjq803691Q4QQpZ2q8BzQ ENCSR000AHD https://www.encodeproject.org/experiments/ENCSR000AHD "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF959AJO https://www.encodeproject.org/files/ENCFF959AJO/@@download/ENCFF959AJO.bam ENCFF753KJD https://www.encodeproject.org/files/ENCFF753KJD/@@download/ENCFF753KJD.bam 36.3 M 0 31.0 M 0.855 SE 50 50 native 0.0 M 25.8 M 22.9 M 0.631 0.90 0.92 13.80 115 1.63 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/53fd5e4c-7b4a-4d0b-b352-bcca5357b2a1/@@download/cross_correlation_plot/ENCFF000QLW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB305ZZZ richard-myers:SL13463 ENCFF000QLW HiSeq 2000 2016-11-14T19:32:30.934855+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0ZyVbj03692Xq74z1ygj2qV ENCSR000AHD https://www.encodeproject.org/experiments/ENCSR000AHD "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF049OXC https://www.encodeproject.org/files/ENCFF049OXC/@@download/ENCFF049OXC.bam ENCFF118KBU https://www.encodeproject.org/files/ENCFF118KBU/@@download/ENCFF118KBU.bam 25.6 M 0 20.2 M 0.786 SE 50 50 native 0.0 M 17.0 M 14.3 M 0.557 0.85 0.87 7.85 110 2.05 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/c9df4021-7fa1-45fb-a0ec-a8dc7a561126/@@download/cross_correlation_plot/ENCFF000QLT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB306ZZZ richard-myers:SL16333 ENCFF000QLT HiSeq 2000 2016-11-14T19:32:06.201134+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0ZyVqj03698jxyvkJ65YVg2 ENCSR000BUX https://www.encodeproject.org/experiments/ENCSR000BUX transcription factor EGR1-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSS https://www.encodeproject.org/experiments/ENCSR000BSS transcription factor ELF1-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BTR https://www.encodeproject.org/experiments/ENCSR000BTR transcription factor EP300-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR703TNG https://www.encodeproject.org/experiments/ENCSR703TNG "transcription factor,recombinant protein" FLAG-RAD21-human MCF-7 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF337KIG https://www.encodeproject.org/files/ENCFF337KIG/@@download/ENCFF337KIG.bam ENCFF969FLL https://www.encodeproject.org/files/ENCFF969FLL/@@download/ENCFF969FLL.bam 31.8 M 0 31.1 M 0.977 SE 50 50 native 0.0 M 26.3 M 24.8 M 0.779 0.95 0.96 27.08 105 1.51 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a80c544-4136-4cf2-b309-6cd27d139905/@@download/cross_correlation_plot/ENCFF059UOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB493OOD richard-myers:SL95619 ENCFF059UOO HiSeq 2000 2016-10-09T17:30:52.512846+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62PQ0jv1VK5GXJx08X4X3 ENCSR703TNG https://www.encodeproject.org/experiments/ENCSR703TNG "transcription factor,recombinant protein" FLAG-RAD21-human MCF-7 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF955RIY https://www.encodeproject.org/files/ENCFF955RIY/@@download/ENCFF955RIY.bam ENCFF535LOU https://www.encodeproject.org/files/ENCFF535LOU/@@download/ENCFF535LOU.bam 27.4 M 0 25.5 M 0.929 SE 50 50 native 0.0 M 22.0 M 20.0 M 0.730 0.92 0.92 13.97 135 1.61 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/93bfcea4-a292-4597-8ccf-df86125f0beb/@@download/cross_correlation_plot/ENCFF594DJD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB446PKP richard-myers:SL95620 ENCFF594DJD HiSeq 2000 2016-10-09T17:30:58.708286+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv62VQ0jv1kK69v90ZyPZXQ ENCSR000BUI https://www.encodeproject.org/experiments/ENCSR000BUI transcription factor FOSL2-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BUJ https://www.encodeproject.org/experiments/ENCSR000BUJ transcription factor FOXM1-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BUK https://www.encodeproject.org/experiments/ENCSR000BUK transcription factor GABPA-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BST https://www.encodeproject.org/experiments/ENCSR000BST transcription factor GATA3-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BTP https://www.encodeproject.org/experiments/ENCSR000BTP "transcription factor,chromatin remodeller" HDAC2-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSU https://www.encodeproject.org/experiments/ENCSR000BSU transcription factor JUND-human MCF-7 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF821VJR https://www.encodeproject.org/files/ENCFF821VJR/@@download/ENCFF821VJR.bam ENCFF193UAS https://www.encodeproject.org/files/ENCFF193UAS/@@download/ENCFF193UAS.bam 27.7 M 0 17.2 M 0.620 SE 50 50 native 0.0 M 14.1 M 12.6 M 0.453 0.90 0.90 10.27 145 1.09 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed0f0a04-1773-4d37-adbc-75658eed751e/@@download/cross_correlation_plot/ENCFF000QOB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNQ richard-myers:SL13484 ENCFF000QOB HiSeq 2000 2016-11-30T18:12:39.155717+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4VB0036985fFbV0Z7XfJZ ENCSR000BSU https://www.encodeproject.org/experiments/ENCSR000BSU transcription factor JUND-human MCF-7 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF232NIJ https://www.encodeproject.org/files/ENCFF232NIJ/@@download/ENCFF232NIJ.bam ENCFF494QYM https://www.encodeproject.org/files/ENCFF494QYM/@@download/ENCFF494QYM.bam 21.3 M 0 20.3 M 0.953 SE 50 50 native 0.0 M 17.1 M 15.6 M 0.733 0.92 0.92 12.27 110 1.08 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/3d0e845d-624b-4b15-a297-70bb51222857/@@download/cross_correlation_plot/ENCFF000QOD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRN richard-myers:SL14694 ENCFF000QOD HiSeq 2000 2016-11-30T18:12:04.305887+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4VQQ0369BPZf625V8x6zP ENCSR000BUL https://www.encodeproject.org/experiments/ENCSR000BUL transcription factor MAX-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR940MHE https://www.encodeproject.org/experiments/ENCSR940MHE transcription factor MBD2-human MCF-7 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF188KZY https://www.encodeproject.org/files/ENCFF188KZY/@@download/ENCFF188KZY.bam ENCFF338QKW https://www.encodeproject.org/files/ENCFF338QKW/@@download/ENCFF338QKW.bam 25.1 M 0 24.0 M 0.957 SE 50 50 native 0.0 M 19.6 M 19.2 M 0.765 0.98 0.98 58.81 110 1.09 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/e6fc70bf-a366-43c1-9c83-31446247ce8d/@@download/cross_correlation_plot/ENCFF323JYW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB376JLV richard-myers:SL65258 ENCFF323JYW HiSeq 2000 2016-10-09T17:03:55.180192+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Jq80jv1XvFGkBjjfjQf1 ENCSR940MHE https://www.encodeproject.org/experiments/ENCSR940MHE transcription factor MBD2-human MCF-7 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF733CGU https://www.encodeproject.org/files/ENCFF733CGU/@@download/ENCFF733CGU.bam ENCFF440ASH https://www.encodeproject.org/files/ENCFF440ASH/@@download/ENCFF440ASH.bam 33.0 M 0 32.0 M 0.971 SE 50 50 native 0.0 M 26.0 M 25.3 M 0.768 0.98 0.98 46.15 100 1.03 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/e99e5f0d-f598-47e6-a8db-68609ec819f2/@@download/cross_correlation_plot/ENCFF338QMC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB344JCF richard-myers:SL68413 ENCFF338QMC HiSeq 2000 2016-10-09T17:04:12.389687+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv4Jvj0jv1XYYX2Fxk3f5Jz ENCSR000BUY https://www.encodeproject.org/experiments/ENCSR000BUY transcription factor NR2F2-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BUZ https://www.encodeproject.org/experiments/ENCSR000BUZ transcription factor PML-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BTQ https://www.encodeproject.org/experiments/ENCSR000BTQ transcription factor RAD21-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSP https://www.encodeproject.org/experiments/ENCSR000BSP "transcription factor,chromatin remodeller" REST-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BUM https://www.encodeproject.org/experiments/ENCSR000BUM transcription factor SIN3A-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BVA https://www.encodeproject.org/experiments/ENCSR000BVA transcription factor SRF-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000AHF https://www.encodeproject.org/experiments/ENCSR000AHF transcription factor TAF1-human MCF-7 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF430REQ https://www.encodeproject.org/files/ENCFF430REQ/@@download/ENCFF430REQ.bam ENCFF724MQA https://www.encodeproject.org/files/ENCFF724MQA/@@download/ENCFF724MQA.bam 53.8 M 0 48.8 M 0.907 SE 50 50 None 0.0 M 39.7 M 37.7 M 0.701 0.96 0.96 23.86 80 1.04 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/81c463bd-537e-4075-94ce-4a8e850c1c1c/@@download/cross_correlation_plot/ENCFF000QRS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB309ZZZ richard-myers:SL14572 ENCFF000QRS HiSeq 2000 2016-05-05T16:55:30.086507+00:00 released pipeline completed https://platform.dnanexus.com/projects/BKp5K980bpZZ096Xp1XQ02fZ/monitor/analysis/BvGb9480bpZj3b2GvxGfzJgV ENCSR000AHF https://www.encodeproject.org/experiments/ENCSR000AHF transcription factor TAF1-human MCF-7 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF221KOJ https://www.encodeproject.org/files/ENCFF221KOJ/@@download/ENCFF221KOJ.bam ENCFF735UKW https://www.encodeproject.org/files/ENCFF735UKW/@@download/ENCFF735UKW.bam 24.2 M 0 20.9 M 0.864 SE 50 50 None 0.0 M 17.3 M 16.0 M 0.660 0.94 0.93 15.25 90 1.05 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/d31aa6a5-3d6c-4aa2-bc1b-02f2615ea0f8/@@download/cross_correlation_plot/ENCFF000QRL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB310ZZZ richard-myers:SL16339 ENCFF000QRL HiSeq 2000 2016-05-05T16:53:56.529580+00:00 released pipeline completed https://platform.dnanexus.com/projects/BKp5K980bpZZ096Xp1XQ02fZ/monitor/analysis/BvGb9680bpZf8yVbk5JXPpzG ENCSR000BUN https://www.encodeproject.org/experiments/ENCSR000BUN transcription factor TCF12-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BUO https://www.encodeproject.org/experiments/ENCSR000BUO transcription factor TEAD4-human MCF-7 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR155VDK https://www.encodeproject.org/experiments/ENCSR155VDK transcription factor ZBTB11-human MCF-7 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF952VBJ https://www.encodeproject.org/files/ENCFF952VBJ/@@download/ENCFF952VBJ.bam ENCFF657TOU https://www.encodeproject.org/files/ENCFF657TOU/@@download/ENCFF657TOU.bam 31.1 M 0 28.8 M 0.927 SE 50 50 native 0.0 M 23.4 M 22.6 M 0.726 0.97 0.97 40.98 110 1.08 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/9744451c-027a-47ff-b66c-1482b3fec3ae/@@download/cross_correlation_plot/ENCFF040XLF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB339BDV richard-myers:SL65275 ENCFF040XLF HiSeq 2000 2016-10-09T17:10:09.810883+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qQj0jv1g5yGjfvVx0Kgq ENCSR155VDK https://www.encodeproject.org/experiments/ENCSR155VDK transcription factor ZBTB11-human MCF-7 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF619YHC https://www.encodeproject.org/files/ENCFF619YHC/@@download/ENCFF619YHC.bam ENCFF063HUM https://www.encodeproject.org/files/ENCFF063HUM/@@download/ENCFF063HUM.bam 25.7 M 0 23.0 M 0.896 SE 50 50 native 0.0 M 19.3 M 14.6 M 0.570 0.77 0.76 4.01 120 1.13 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/745d96b7-a6de-4e20-a1e3-1d8e7948317c/@@download/cross_correlation_plot/ENCFF300NGT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB370SIT richard-myers:SL77450 ENCFF300NGT HiSeq 2000 2016-10-09T17:09:41.117929+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv3qXj0jv1f60PxyZ9JGKvp ENCSR876UYH https://www.encodeproject.org/experiments/ENCSR876UYH transcription factor ZHX2-human MCF-7 immortalized cell line 1 richard-myers ENCODE3 GRCh38 ENCFF527PGM https://www.encodeproject.org/files/ENCFF527PGM/@@download/ENCFF527PGM.bam ENCFF445MBN https://www.encodeproject.org/files/ENCFF445MBN/@@download/ENCFF445MBN.bam 27.8 M 0 26.4 M 0.947 SE 50 50 native 0.0 M 21.7 M 20.6 M 0.739 0.95 0.95 21.32 75 1.02 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a533c8c-bcff-43ff-b24a-aea7e5811695/@@download/cross_correlation_plot/ENCFF604LVZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB892XMR richard-myers:SL63877 ENCFF604LVZ HiSeq 2000 2016-10-09T17:05:46.348529+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qQj0jv1jG2Qk7JXpxvXx ENCSR876UYH https://www.encodeproject.org/experiments/ENCSR876UYH transcription factor ZHX2-human MCF-7 immortalized cell line 2 richard-myers ENCODE3 GRCh38 ENCFF421SOC https://www.encodeproject.org/files/ENCFF421SOC/@@download/ENCFF421SOC.bam ENCFF147AFG https://www.encodeproject.org/files/ENCFF147AFG/@@download/ENCFF147AFG.bam 23.8 M 0 21.7 M 0.912 SE 50 50 native 0.0 M 18.1 M 17.3 M 0.727 0.96 0.96 26.70 135 1.08 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/1b15d630-db59-41ac-a8eb-8e0580ec4d41/@@download/cross_correlation_plot/ENCFF937RXL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB909XLV richard-myers:SL81116 ENCFF937RXL HiSeq 2000 2016-10-09T17:05:01.604180+00:00 released pipeline completed https://platform.dnanexus.com/projects/Bzqb7P00jv1z7k40YZZJJgyY/monitor/analysis/Bzv5qXj0jv1xFKXGVbpg0QB1 ENCSR000BVS https://www.encodeproject.org/experiments/ENCSR000BVS control Control-human neural cell in vitro differentiated cells 1 richard-myers ENCODE2 GRCh38 ENCFF599OHS https://www.encodeproject.org/files/ENCFF599OHS/@@download/ENCFF599OHS.bam ENCFF058QKV https://www.encodeproject.org/files/ENCFF058QKV/@@download/ENCFF058QKV.bam 42.9 M 0 37.8 M 0.880 SE 50 50 native 0.0 M 30.4 M 29.9 M 0.697 0.99 0.99 76.24 100 1.01 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb88434f-0d38-4f77-965a-150e467157a3/@@download/cross_correlation_plot/ENCFF000OXP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKB richard-myers:SL13320 ENCFF000OXP HiSeq 2000 2017-06-16T19:17:34.935857+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B19p80369JgbfgB3504Vj2 ENCSR000BVS https://www.encodeproject.org/experiments/ENCSR000BVS control Control-human neural cell in vitro differentiated cells 2 richard-myers ENCODE2 GRCh38 ENCFF495JTQ https://www.encodeproject.org/files/ENCFF495JTQ/@@download/ENCFF495JTQ.bam ENCFF654WVI https://www.encodeproject.org/files/ENCFF654WVI/@@download/ENCFF654WVI.bam 30.8 M 0 27.0 M 0.874 SE 50 50 native 0.0 M 20.9 M 20.6 M 0.670 0.99 0.99 123.36 200 1.01 0.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a70448a-4d23-421e-9a84-b0958c5b3ef0/@@download/cross_correlation_plot/ENCFF000OXQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKC richard-myers:SL16755 ENCFF000OXQ HiSeq 2000 2017-06-16T19:17:01.485013+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B19zj03699pFPY6J841qFY ENCSR000BTW https://www.encodeproject.org/experiments/ENCSR000BTW "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human neural cell in vitro differentiated cells 1 richard-myers ENCODE2 GRCh38 ENCFF372IRO https://www.encodeproject.org/files/ENCFF372IRO/@@download/ENCFF372IRO.bam ENCFF709AFO https://www.encodeproject.org/files/ENCFF709AFO/@@download/ENCFF709AFO.bam 33.7 M 0 32.3 M 0.960 SE 50 50 native 0.0 M 27.7 M 26.0 M 0.771 0.95 0.96 25.78 85 1.54 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/25574fe6-2a94-48e1-b7c9-a968db7c3ae1/@@download/cross_correlation_plot/ENCFF000OXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JAV richard-myers:SL13298 ENCFF000OXG HiSeq 2000 2017-06-16T19:44:51.574593+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5211jj0369PYvZ1P63bV32g ENCSR000BTW https://www.encodeproject.org/experiments/ENCSR000BTW "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human neural cell in vitro differentiated cells 2 richard-myers ENCODE2 GRCh38 ENCFF319TCF https://www.encodeproject.org/files/ENCFF319TCF/@@download/ENCFF319TCF.bam ENCFF402LCR https://www.encodeproject.org/files/ENCFF402LCR/@@download/ENCFF402LCR.bam 28.1 M 0 26.5 M 0.943 SE 50 50 native 0.0 M 23.1 M 21.5 M 0.765 0.94 0.95 22.30 85 1.83 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ba4dabe-c658-427f-95dd-2f5ae3c0763b/@@download/cross_correlation_plot/ENCFF000OXD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTL richard-myers:SL14592 ENCFF000OXD HiSeq 2000 2017-06-16T19:23:08.757367+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5211vj03698QYbXFx1BZ708 ENCSR000BTV https://www.encodeproject.org/experiments/ENCSR000BTV "transcription factor,chromatin remodeller" REST-human neural cell in vitro differentiated cells richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BTX https://www.encodeproject.org/experiments/ENCSR000BTX transcription factor TAF1-human neural cell in vitro differentiated cells richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR088FBX https://www.encodeproject.org/experiments/ENCSR088FBX control Control-human omental fat pad tissue 1 richard-myers ENCODE3 GRCh38 ENCFF136JMK https://www.encodeproject.org/files/ENCFF136JMK/@@download/ENCFF136JMK.bam ENCFF567TUG https://www.encodeproject.org/files/ENCFF567TUG/@@download/ENCFF567TUG.bam 112.5 M 0 95.0 M 0.844 PE 76 76 native 38.2 M 0.0 M 37.7 M 0.669 0.99 0.99 72.93 310 1.01 0.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/2783a75e-4269-4188-9a3b-7b11dda6f9bf/@@download/cross_correlation_plot/ENCFF043BUSENCFF942ZHL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB253ZGP richard-myers:SL161301 "ENCFF043BUS,ENCFF942ZHL" HiSeq 2000 2016-11-08T22:49:20.465602+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYfv003697pV4kg5bgvXV5 ENCSR377VHO https://www.encodeproject.org/experiments/ENCSR377VHO control Control-human omental fat pad tissue 1 richard-myers ENCODE3 GRCh38 ENCFF282REU https://www.encodeproject.org/files/ENCFF282REU/@@download/ENCFF282REU.bam ENCFF458XZK https://www.encodeproject.org/files/ENCFF458XZK/@@download/ENCFF458XZK.bam 107.3 M 0 87.7 M 0.817 PE 76 76 native 34.2 M 0.0 M 33.7 M 0.628 0.99 0.99 69.82 300 1.01 0.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7f585c8-4ee5-4b21-94ff-05136c49e785/@@download/cross_correlation_plot/ENCFF960ZTNENCFF985KLY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB672BRM richard-myers:SL161302 "ENCFF985KLY,ENCFF960ZTN" HiSeq 2000 2016-11-08T22:48:25.280207+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYgy803695gKVkvJqG3f24 ENCSR483JPG https://www.encodeproject.org/experiments/ENCSR483JPG control Control-human omental fat pad tissue 1 richard-myers ENCODE3 GRCh38 ENCFF195IWD https://www.encodeproject.org/files/ENCFF195IWD/@@download/ENCFF195IWD.bam ENCFF522TXM https://www.encodeproject.org/files/ENCFF522TXM/@@download/ENCFF522TXM.bam 89.0 M 0 73.8 M 0.829 PE 76 76 native 30.0 M 0.0 M 28.3 M 0.635 0.94 0.94 17.35 90 1.07 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/634e25fa-688c-4d5f-a94a-af6e44a0755b/@@download/cross_correlation_plot/ENCFF971VIWENCFF999NFH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB267LWH richard-myers:SL161296 "ENCFF999NFH,ENCFF971VIW" HiSeq 2000 2016-11-08T22:46:57.967710+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYkxQ03692k0X1Jb9xFQqb ENCSR875UDE https://www.encodeproject.org/experiments/ENCSR875UDE control Control-human omental fat pad tissue 1 richard-myers ENCODE3 GRCh38 ENCFF163JLU https://www.encodeproject.org/files/ENCFF163JLU/@@download/ENCFF163JLU.bam ENCFF042CPC https://www.encodeproject.org/files/ENCFF042CPC/@@download/ENCFF042CPC.bam 106.8 M 0 92.0 M 0.862 PE 76 76 native 36.5 M 0.0 M 34.9 M 0.654 0.96 0.96 22.67 90 1.06 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/42f07dbb-07df-4cb7-b6a8-a4ce4861a2c1/@@download/cross_correlation_plot/ENCFF841NYDENCFF005BUI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB343PHD richard-myers:SL161295 "ENCFF841NYD,ENCFF005BUI" HiSeq 2000 2016-11-08T22:49:25.700454+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYkgQ03695gKVkvJqG3f30 ENCSR047DRF https://www.encodeproject.org/experiments/ENCSR047DRF transcription factor EP300-human omental fat pad tissue 1 richard-myers ENCODE3 GRCh38 ENCFF502KKQ https://www.encodeproject.org/files/ENCFF502KKQ/@@download/ENCFF502KKQ.bam ENCFF227ZUD https://www.encodeproject.org/files/ENCFF227ZUD/@@download/ENCFF227ZUD.bam 112.2 M 0 99.8 M 0.889 PE 76 76 native 40.0 M 0.0 M 39.4 M 0.703 0.99 0.99 74.52 100 1.06 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/adbca8ff-fea3-4227-a745-149bc1b7442b/@@download/cross_correlation_plot/ENCFF985MPRENCFF850QKH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB151YDR richard-myers:SL161313 "ENCFF985MPR,ENCFF850QKH" HiSeq 2000 2016-11-08T22:48:22.899360+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYpVj03690ZP2yPkbXgXKj ENCSR677FYM https://www.encodeproject.org/experiments/ENCSR677FYM transcription factor EP300-human omental fat pad tissue 1 richard-myers ENCODE3 GRCh38 ENCFF648GWA https://www.encodeproject.org/files/ENCFF648GWA/@@download/ENCFF648GWA.bam ENCFF009DSU https://www.encodeproject.org/files/ENCFF009DSU/@@download/ENCFF009DSU.bam 103.1 M 0 79.9 M 0.775 PE 76 76 native 32.9 M 0.0 M 22.4 M 0.435 0.68 0.67 2.82 120 1.07 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef868324-92e3-449e-ae8f-01ff60d5b8d3/@@download/cross_correlation_plot/ENCFF319EYMENCFF025XGP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB208GOV richard-myers:SL161307 "ENCFF025XGP,ENCFF319EYM" HiSeq 2000 2016-11-08T22:47:09.768833+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYpf803690ZP2yPkbXgXP2 ENCSR779NON https://www.encodeproject.org/experiments/ENCSR779NON transcription factor EP300-human omental fat pad tissue 1 richard-myers ENCODE3 GRCh38 ENCFF198YBT https://www.encodeproject.org/files/ENCFF198YBT/@@download/ENCFF198YBT.bam ENCFF157OFR https://www.encodeproject.org/files/ENCFF157OFR/@@download/ENCFF157OFR.bam 124.6 M 0 112.8 M 0.905 PE 76 76 native 45.8 M 0.0 M 45.2 M 0.726 0.99 0.99 79.27 100 1.05 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/5dbfb385-0eb0-46d5-80c7-7d872e41390a/@@download/cross_correlation_plot/ENCFF120IAIENCFF094UFQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB087BQY richard-myers:SL161312 "ENCFF094UFQ,ENCFF120IAI" HiSeq 2000 2016-11-08T22:49:09.501630+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYvGQ0369Bv1ZzP1bXqQBb ENCSR846TPT https://www.encodeproject.org/experiments/ENCSR846TPT transcription factor EP300-human omental fat pad tissue 1 richard-myers ENCODE3 GRCh38 ENCFF332RWH https://www.encodeproject.org/files/ENCFF332RWH/@@download/ENCFF332RWH.bam ENCFF088YLM https://www.encodeproject.org/files/ENCFF088YLM/@@download/ENCFF088YLM.bam 75.2 M 0 64.3 M 0.855 PE 76 76 native 26.2 M 0.0 M 23.1 M 0.615 0.88 0.88 8.28 120 1.05 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a78cdf7-9163-44d6-834b-2fe078d5da7f/@@download/cross_correlation_plot/ENCFF258EWBENCFF837BAY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB217YAX richard-myers:SL161306 "ENCFF258EWB,ENCFF837BAY" HiSeq 2000 2016-11-08T22:46:23.515904+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYqZj03693q233YJ9xypfq ENCSR255HLM https://www.encodeproject.org/experiments/ENCSR255HLM control Control-human ovary tissue 1 richard-myers ENCODE3 GRCh38 ENCFF271JKY https://www.encodeproject.org/files/ENCFF271JKY/@@download/ENCFF271JKY.bam ENCFF295VUB https://www.encodeproject.org/files/ENCFF295VUB/@@download/ENCFF295VUB.bam 124.8 M 0 105.1 M 0.842 PE 76 76 native 41.9 M 0.0 M 41.0 M 0.657 0.98 0.98 49.11 265 1.01 0.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/c7dd0362-3404-4171-b82a-2642745dd2d5/@@download/cross_correlation_plot/ENCFF610WEUENCFF950EXK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB341QWK richard-myers:SL161566 "ENCFF950EXK,ENCFF610WEU" HiSeq 2000 2017-02-02T04:08:34.556020+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Yfj0369BpyVQJ710fvX2 ENCSR594DIR https://www.encodeproject.org/experiments/ENCSR594DIR control Control-human ovary tissue 1 richard-myers ENCODE3 GRCh38 ENCFF708OSB https://www.encodeproject.org/files/ENCFF708OSB/@@download/ENCFF708OSB.bam ENCFF762QEO https://www.encodeproject.org/files/ENCFF762QEO/@@download/ENCFF762QEO.bam 146.2 M 0 120.8 M 0.827 PE 76 76 native 47.9 M 0.0 M 46.3 M 0.633 0.97 0.97 29.71 90 1.06 1.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2b783ef-15e9-4025-9f1b-89cd6f6fd1c7/@@download/cross_correlation_plot/ENCFF991XBBENCFF048DAV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB464JLT richard-myers:SL161564 "ENCFF991XBB,ENCFF048DAV" HiSeq 2000 2017-02-02T06:11:11.357055+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293Bvj03696Kgy2J6PFqvKj ENCSR158TRP https://www.encodeproject.org/experiments/ENCSR158TRP transcription factor EP300-human ovary tissue 1 richard-myers ENCODE3 GRCh38 ENCFF310SVP https://www.encodeproject.org/files/ENCFF310SVP/@@download/ENCFF310SVP.bam ENCFF516AQU https://www.encodeproject.org/files/ENCFF516AQU/@@download/ENCFF516AQU.bam 67.8 M 0 62.2 M 0.917 PE 76 76 native 24.8 M 0.0 M 24.1 M 0.710 0.97 0.97 34.79 125 1.10 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ce20f6a-62ed-46b1-8523-80598165dbd1/@@download/cross_correlation_plot/ENCFF547VRGENCFF678KER.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB831MSC richard-myers:SL161555 "ENCFF678KER,ENCFF547VRG" HiSeq 2000 2017-02-02T01:22:59.518055+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2934Z003693jxfkJ697fv30 ENCSR696LQU https://www.encodeproject.org/experiments/ENCSR696LQU transcription factor EP300-human ovary tissue 1 richard-myers ENCODE3 GRCh38 ENCFF405UYE https://www.encodeproject.org/files/ENCFF405UYE/@@download/ENCFF405UYE.bam ENCFF177THV https://www.encodeproject.org/files/ENCFF177THV/@@download/ENCFF177THV.bam 85.9 M 0 78.6 M 0.915 PE 76 76 native 32.0 M 0.0 M 30.0 M 0.699 0.94 0.94 15.35 120 1.09 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/94898946-a1b5-457a-af77-b047040d482b/@@download/cross_correlation_plot/ENCFF065ZFKENCFF655KYQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB285SPD richard-myers:SL161557 "ENCFF065ZFK,ENCFF655KYQ" HiSeq 2000 2017-02-02T02:07:09.798831+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292k0003695y6gFJ6jy81Gf ENCSR000BIN https://www.encodeproject.org/experiments/ENCSR000BIN control Control-human Panc1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF349WAO https://www.encodeproject.org/files/ENCFF349WAO/@@download/ENCFF349WAO.bam ENCFF893HUW https://www.encodeproject.org/files/ENCFF893HUW/@@download/ENCFF893HUW.bam 19.0 M 0 11.7 M 0.618 SE 36 36 native 0.0 M 7.7 M 7.4 M 0.391 0.99 0.99 115.27 80 1.11 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/d0c5a5c4-c6c6-4a93-9710-bd29a36dbc3e/@@download/cross_correlation_plot/ENCFF000QTJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCV richard-myers:SL117 ENCFF000QTJ Illumina Genome Analyzer IIx 2016-10-26T17:42:48.982263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F081zbj0369BX1xqb1B8087J ENCSR000BIN https://www.encodeproject.org/experiments/ENCSR000BIN control Control-human Panc1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF270FBL https://www.encodeproject.org/files/ENCFF270FBL/@@download/ENCFF270FBL.bam ENCFF904AFA https://www.encodeproject.org/files/ENCFF904AFA/@@download/ENCFF904AFA.bam 107.1 M 0 40.6 M 0.379 SE 36 36 native 0.0 M 26.1 M 12.3 M 0.115 0.48 0.44 1.41 60 1.04 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce5b64a9-5ac5-4a74-8350-8bff4860d84a/@@download/cross_correlation_plot/ENCFF000QTU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JJO richard-myers:SL523 ENCFF000QTU Illumina Genome Analyzer IIx 2016-10-26T17:44:47.375135+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F081zkj036923z1QYVBPkq1X ENCSR000BPP https://www.encodeproject.org/experiments/ENCSR000BPP control Control-human Panc1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF317CKP https://www.encodeproject.org/files/ENCFF317CKP/@@download/ENCFF317CKP.bam ENCFF996OUT https://www.encodeproject.org/files/ENCFF996OUT/@@download/ENCFF996OUT.bam 65.0 M 0 60.9 M 0.936 SE 36 36 native 0.0 M 46.0 M 22.3 M 0.343 0.49 0.00 0.00 115 1.02 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/65088ba4-5ec6-448c-9513-37c41a803497/@@download/cross_correlation_plot/ENCFF000QTV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEL richard-myers:SL2340 ENCFF000QTV Illumina Genome Analyzer IIx 2016-10-26T18:07:06.670205+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0821q003695140QP5B2vfXq ENCSR000BPP https://www.encodeproject.org/experiments/ENCSR000BPP control Control-human Panc1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF287VDN https://www.encodeproject.org/files/ENCFF287VDN/@@download/ENCFF287VDN.bam ENCFF098QIR https://www.encodeproject.org/files/ENCFF098QIR/@@download/ENCFF098QIR.bam 52.2 M 0 47.0 M 0.900 SE 36 36 native 0.0 M 35.3 M 34.2 M 0.655 0.97 0.97 38.23 90 1.02 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e12a0ca-d726-4f44-a70f-5cd02906b939/@@download/cross_correlation_plot/ENCFF000QTR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEK richard-myers:SL3776 ENCFF000QTR Illumina Genome Analyzer IIx 2016-10-26T18:07:09.323909+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08223j0369BX1xqb1B8088g ENCSR000BVV https://www.encodeproject.org/experiments/ENCSR000BVV control Control-human Panc1 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BOV https://www.encodeproject.org/experiments/ENCSR000BOV "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human Panc1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF630ZLF https://www.encodeproject.org/files/ENCFF630ZLF/@@download/ENCFF630ZLF.bam ENCFF365AWP https://www.encodeproject.org/files/ENCFF365AWP/@@download/ENCFF365AWP.bam 22.8 M 0 20.1 M 0.884 SE 36 36 native 0.0 M 15.3 M 14.1 M 0.617 0.92 0.92 13.09 140 1.28 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/10089c67-e06e-4e60-9b9b-12f1e689baab/@@download/cross_correlation_plot/ENCFF000QTC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCN richard-myers:SL2343 ENCFF000QTC Illumina Genome Analyzer IIx 2016-12-11T05:04:28.346632+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166PQQ0369PvYp91zK1PxqQ ENCSR000BOV https://www.encodeproject.org/experiments/ENCSR000BOV "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human Panc1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF635PGS https://www.encodeproject.org/files/ENCFF635PGS/@@download/ENCFF635PGS.bam ENCFF993CNT https://www.encodeproject.org/files/ENCFF993CNT/@@download/ENCFF993CNT.bam 43.3 M 0 37.5 M 0.865 SE 36 36 native 0.0 M 29.0 M 20.5 M 0.474 0.74 0.74 3.71 125 1.26 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe5b340a-e9a9-41b9-ab55-15f7309645db/@@download/cross_correlation_plot/ENCFF000QTI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCO richard-myers:SL5609 ENCFF000QTI Illumina Genome Analyzer IIx 2016-12-11T08:42:48.963709+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166PfQ0369PJ8BP63qf1Fvj ENCSR000BJO https://www.encodeproject.org/experiments/ENCSR000BJO "transcription factor,chromatin remodeller" REST-human Panc1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF337NPB https://www.encodeproject.org/files/ENCFF337NPB/@@download/ENCFF337NPB.bam ENCFF527HDY https://www.encodeproject.org/files/ENCFF527HDY/@@download/ENCFF527HDY.bam 61.4 M 0 17.8 M 0.290 SE 36 36 native 0.0 M 11.8 M 10.8 M 0.175 0.92 0.94 19.39 90 1.48 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/97362493-f011-4572-902f-b84b2e865f64/@@download/cross_correlation_plot/ENCFF000QSN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KEU richard-myers:SL116 ENCFF000QSN Illumina Genome Analyzer IIx 2016-12-11T04:03:26.592381+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164q900369PJ8BP63qf1FgX ENCSR000BJO https://www.encodeproject.org/experiments/ENCSR000BJO "transcription factor,chromatin remodeller" REST-human Panc1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF460RPS https://www.encodeproject.org/files/ENCFF460RPS/@@download/ENCFF460RPS.bam ENCFF573FJR https://www.encodeproject.org/files/ENCFF573FJR/@@download/ENCFF573FJR.bam 87.4 M 0 27.3 M 0.312 SE 36 36 native 0.0 M 16.8 M 8.7 M 0.099 0.52 0.69 4.93 75 1.49 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/a83764c1-32f7-48b4-a320-d11e6da4beba/@@download/cross_correlation_plot/ENCFF000QST.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXY richard-myers:SL522 ENCFF000QST Illumina Genome Analyzer IIx 2016-12-11T04:09:25.768646+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164qJQ0369PvYp91zK1PxGj ENCSR000BPK https://www.encodeproject.org/experiments/ENCSR000BPK "transcription factor,chromatin remodeller" REST-human Panc1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF469ACE https://www.encodeproject.org/files/ENCFF469ACE/@@download/ENCFF469ACE.bam ENCFF752OUG https://www.encodeproject.org/files/ENCFF752OUG/@@download/ENCFF752OUG.bam 9.7 M 0 6.4 M 0.662 SE 36 36 native 0.0 M 4.7 M 3.3 M 0.345 0.72 0.70 3.21 75 1.46 2.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/c31329bd-071d-46d5-9dbe-2c04a2c32d96/@@download/cross_correlation_plot/ENCFF000QSK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEG richard-myers:SL4437 ENCFF000QSK Illumina Genome Analyzer IIx 2016-12-11T04:05:49.109669+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165P400369PvYp91zK1PxY0 ENCSR000BPK https://www.encodeproject.org/experiments/ENCSR000BPK "transcription factor,chromatin remodeller" REST-human Panc1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF210CTW https://www.encodeproject.org/files/ENCFF210CTW/@@download/ENCFF210CTW.bam ENCFF834NZK https://www.encodeproject.org/files/ENCFF834NZK/@@download/ENCFF834NZK.bam 12.1 M 0 9.2 M 0.761 SE 36 36 native 0.0 M 6.8 M 5.4 M 0.447 0.80 0.82 5.54 125 2.26 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/94556948-3d35-4276-9e22-d3bcb47d0479/@@download/cross_correlation_plot/ENCFF000QSR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEH richard-myers:SL5495 ENCFF000QSR Illumina Genome Analyzer IIx 2016-12-11T04:08:44.693821+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165P8j0369GF0YB1zjPf6yj ENCSR000BUP https://www.encodeproject.org/experiments/ENCSR000BUP "transcription factor,chromatin remodeller" REST-human Panc1 immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 processing ENCSR000BOW https://www.encodeproject.org/experiments/ENCSR000BOW transcription factor SIN3A-human Panc1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF903NNV https://www.encodeproject.org/files/ENCFF903NNV/@@download/ENCFF903NNV.bam ENCFF967DQL https://www.encodeproject.org/files/ENCFF967DQL/@@download/ENCFF967DQL.bam 15.8 M 0 12.9 M 0.816 SE 36 36 native 0.0 M 9.7 M 6.2 M 0.392 0.65 0.62 2.36 125 1.46 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1b4944d-ba9f-4fd3-8526-5eeea7cbc8c2/@@download/cross_correlation_plot/ENCFF000QUD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVX richard-myers:SL2344 ENCFF000QUD Illumina Genome Analyzer IIx 2016-12-11T05:00:54.003352+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Xv80369BgG8x1ygv1XkZ ENCSR000BOW https://www.encodeproject.org/experiments/ENCSR000BOW transcription factor SIN3A-human Panc1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF708YMY https://www.encodeproject.org/files/ENCFF708YMY/@@download/ENCFF708YMY.bam ENCFF770XQC https://www.encodeproject.org/files/ENCFF770XQC/@@download/ENCFF770XQC.bam 33.2 M 0 29.6 M 0.891 SE 36 36 native 0.0 M 21.8 M 16.3 M 0.490 0.75 0.74 3.49 110 1.09 2.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb7d141f-c51a-41c9-8e07-1342959bcb9b/@@download/cross_correlation_plot/ENCFF000QUG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVW richard-myers:SL5042 ENCFF000QUG Illumina Genome Analyzer IIx 2016-12-11T09:38:22.362088+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166Y1j03695F8Bk64ff078v ENCSR000BJU https://www.encodeproject.org/experiments/ENCSR000BJU control Control-human PFSK-1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF531HIX https://www.encodeproject.org/files/ENCFF531HIX/@@download/ENCFF531HIX.bam ENCFF687DIS https://www.encodeproject.org/files/ENCFF687DIS/@@download/ENCFF687DIS.bam 8.3 M 0 6.2 M 0.740 SE 32 32 native 0.0 M 4.2 M 4.0 M 0.479 0.99 0.99 93.16 90 1.13 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/64fa14bd-53fa-49f5-8b21-87291fec5687/@@download/cross_correlation_plot/ENCFF000QVO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGE richard-myers:SL150 ENCFF000QVO Illumina Genome Analyzer IIx 2016-10-26T17:37:56.835476+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08252803697KPkyX9BPPq0x ENCSR000BJU https://www.encodeproject.org/experiments/ENCSR000BJU control Control-human PFSK-1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF575DMX https://www.encodeproject.org/files/ENCFF575DMX/@@download/ENCFF575DMX.bam ENCFF404ZBY https://www.encodeproject.org/files/ENCFF404ZBY/@@download/ENCFF404ZBY.bam 48.5 M 0 30.2 M 0.622 SE 36 36 native 0.0 M 19.8 M 19.1 M 0.393 0.98 0.98 65.88 125 1.07 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/2a405137-d1df-4076-97c3-aa8103b8adf1/@@download/cross_correlation_plot/ENCFF000QVV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JGD richard-myers:SL412 ENCFF000QVV Illumina Genome Analyzer IIx 2016-10-26T17:40:38.705692+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08256Q03695YX1xgJBKFBg0 ENCSR000BJU https://www.encodeproject.org/experiments/ENCSR000BJU control Control-human PFSK-1 immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF240DER https://www.encodeproject.org/files/ENCFF240DER/@@download/ENCFF240DER.bam ENCFF554MAD https://www.encodeproject.org/files/ENCFF554MAD/@@download/ENCFF554MAD.bam 33.7 M 0 32.5 M 0.964 SE 25 25 native 0.0 M 19.8 M 19.0 M 0.565 0.97 0.97 33.32 75 1.17 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/c386de84-04bd-4454-a98f-dce7c5898e87/@@download/cross_correlation_plot/ENCFF000QVQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVU richard-myers:SL16 ENCFF000QVQ Illumina Genome Analyzer 2016-10-26T17:42:18.215813+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0825J003697KPkyX9BPPq1Q ENCSR000BPQ https://www.encodeproject.org/experiments/ENCSR000BPQ control Control-human PFSK-1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF421EKC https://www.encodeproject.org/files/ENCFF421EKC/@@download/ENCFF421EKC.bam ENCFF277GHL https://www.encodeproject.org/files/ENCFF277GHL/@@download/ENCFF277GHL.bam 27.7 M 0 18.7 M 0.675 SE 36 36 native 0.0 M 14.3 M 13.1 M 0.473 0.93 0.93 14.61 105 1.02 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/fad082d9-7df6-40f7-975c-09e113b2ead2/@@download/cross_correlation_plot/ENCFF000QVY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZE richard-myers:SL2339 ENCFF000QVY Illumina Genome Analyzer IIx 2016-10-26T17:58:55.373522+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0822z003694q32PPxBJ679y ENCSR000BGA https://www.encodeproject.org/experiments/ENCSR000BGA transcription factor FOXP2-human PFSK-1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF726LJT https://www.encodeproject.org/files/ENCFF726LJT/@@download/ENCFF726LJT.bam ENCFF997XTV https://www.encodeproject.org/files/ENCFF997XTV/@@download/ENCFF997XTV.bam 10.0 M 0 10.0 M 1.000 SE 25 25 native 0.0 M 8.5 M 8.1 M 0.812 0.96 0.97 30.13 85 1.91 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/18b316eb-5cfc-4af2-a5bb-0742faa15ab8/@@download/cross_correlation_plot/ENCFF000QUH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEJ richard-myers:SL13 ENCFF000QUH Illumina Genome Analyzer 2016-12-13T18:37:15.655095+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F182v2Q0369KbxV61z4GG8QY ENCSR000BGA https://www.encodeproject.org/experiments/ENCSR000BGA transcription factor FOXP2-human PFSK-1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF192KRY https://www.encodeproject.org/files/ENCFF192KRY/@@download/ENCFF192KRY.bam ENCFF966NNP https://www.encodeproject.org/files/ENCFF966NNP/@@download/ENCFF966NNP.bam 6.5 M 0 6.0 M 0.929 SE 25 25 native 0.0 M 3.8 M 3.7 M 0.570 0.96 0.96 26.48 90 1.78 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/cbf2d62a-ec6e-4616-921b-a592901d1556/@@download/cross_correlation_plot/ENCFF000QUL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEK richard-myers:SL14 ENCFF000QUL Illumina Genome Analyzer 2016-12-13T18:36:53.538066+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F182vV803693JQ1ZJ95Q1b26 ENCSR000BPC https://www.encodeproject.org/experiments/ENCSR000BPC "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human PFSK-1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF494RSA https://www.encodeproject.org/files/ENCFF494RSA/@@download/ENCFF494RSA.bam ENCFF032VMC https://www.encodeproject.org/files/ENCFF032VMC/@@download/ENCFF032VMC.bam 28.9 M 0 25.0 M 0.865 SE 36 36 native 0.0 M 19.6 M 16.5 M 0.573 0.84 0.85 6.49 135 1.41 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/236d4deb-5559-45b1-9a93-dce6d3b1617b/@@download/cross_correlation_plot/ENCFF000QVH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPH richard-myers:SL2353 ENCFF000QVH Illumina Genome Analyzer IIx 2016-12-11T04:11:01.517745+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165GvQ03697vfpg2qKbyZXZ ENCSR000BPC https://www.encodeproject.org/experiments/ENCSR000BPC "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human PFSK-1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF832DKY https://www.encodeproject.org/files/ENCFF832DKY/@@download/ENCFF832DKY.bam ENCFF860ZYU https://www.encodeproject.org/files/ENCFF860ZYU/@@download/ENCFF860ZYU.bam 31.4 M 0 21.8 M 0.695 SE 36 36 native 0.0 M 16.7 M 12.2 M 0.390 0.76 0.76 4.19 170 1.18 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1035dff-3f3f-46aa-a9f5-9d4926396920/@@download/cross_correlation_plot/ENCFF000QVL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPI richard-myers:SL5610 ENCFF000QVL Illumina Genome Analyzer IIx 2016-12-11T04:13:55.861324+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165J1j0369BgG8x1ygv1XJj ENCSR000BJP https://www.encodeproject.org/experiments/ENCSR000BJP "transcription factor,chromatin remodeller" REST-human PFSK-1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF832LYJ https://www.encodeproject.org/files/ENCFF832LYJ/@@download/ENCFF832LYJ.bam ENCFF474ZRD https://www.encodeproject.org/files/ENCFF474ZRD/@@download/ENCFF474ZRD.bam 32.8 M 0 13.1 M 0.400 SE 36 36 native 0.0 M 8.9 M 8.2 M 0.249 0.93 0.97 44.23 85 1.99 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/c917f071-c783-4ced-a7c3-81b7107c5278/@@download/cross_correlation_plot/ENCFF000QUV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAH richard-myers:SL149 ENCFF000QUV Illumina Genome Analyzer IIx 2016-12-11T03:10:41.347415+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164KJ00369GF0YB1zjPf6Z7 ENCSR000BJP https://www.encodeproject.org/experiments/ENCSR000BJP "transcription factor,chromatin remodeller" REST-human PFSK-1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF896NTZ https://www.encodeproject.org/files/ENCFF896NTZ/@@download/ENCFF896NTZ.bam ENCFF478XUA https://www.encodeproject.org/files/ENCFF478XUA/@@download/ENCFF478XUA.bam 33.6 M 0 17.5 M 0.520 SE 36 36 native 0.0 M 11.8 M 10.5 M 0.313 0.89 0.96 36.18 105 1.67 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/74c6af1b-ad52-4573-81a4-f01e36df00c8/@@download/cross_correlation_plot/ENCFF000QUX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUP richard-myers:SL411 ENCFF000QUX Illumina Genome Analyzer IIx 2016-12-11T03:15:05.673974+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164KX003697yz601ypVJ3Fv ENCSR000BOX https://www.encodeproject.org/experiments/ENCSR000BOX "transcription factor,chromatin remodeller" REST-human PFSK-1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF565LZS https://www.encodeproject.org/files/ENCFF565LZS/@@download/ENCFF565LZS.bam ENCFF481LPT https://www.encodeproject.org/files/ENCFF481LPT/@@download/ENCFF481LPT.bam 32.8 M 0 29.6 M 0.904 SE 36 36 native 0.0 M 22.4 M 18.0 M 0.549 0.80 0.86 7.83 130 1.55 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/68700dd9-b579-4888-85b9-890ce2708e0b/@@download/cross_correlation_plot/ENCFF000QVE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMV richard-myers:SL5496 ENCFF000QVE Illumina Genome Analyzer IIx 2016-12-11T03:00:36.755056+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1644F803692pJ09J76g5g4Z ENCSR000BOX https://www.encodeproject.org/experiments/ENCSR000BOX "transcription factor,chromatin remodeller" REST-human PFSK-1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF091GEA https://www.encodeproject.org/files/ENCFF091GEA/@@download/ENCFF091GEA.bam ENCFF022VKY https://www.encodeproject.org/files/ENCFF022VKY/@@download/ENCFF022VKY.bam 23.0 M 0 21.2 M 0.921 SE 36 36 native 0.0 M 16.4 M 12.2 M 0.529 0.75 0.78 4.58 135 1.82 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/0cd52353-2d37-4d57-a300-ea5b1b54a088/@@download/cross_correlation_plot/ENCFF000QVC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JMS richard-myers:SL5497 ENCFF000QVC Illumina Genome Analyzer IIx 2016-12-11T02:48:46.763336+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1644Q00369Bxb30J6x5bZF6 ENCSR000BOY https://www.encodeproject.org/experiments/ENCSR000BOY transcription factor SIN3A-human PFSK-1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF895ZFM https://www.encodeproject.org/files/ENCFF895ZFM/@@download/ENCFF895ZFM.bam ENCFF573NMS https://www.encodeproject.org/files/ENCFF573NMS/@@download/ENCFF573NMS.bam 16.7 M 0 13.9 M 0.835 SE 36 36 native 0.0 M 10.7 M 7.9 M 0.474 0.75 0.74 3.60 130 1.26 3.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/e367a7bf-17ed-4fa8-9b85-fdea2d1235b1/@@download/cross_correlation_plot/ENCFF000QWD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JME richard-myers:SL2354 ENCFF000QWD Illumina Genome Analyzer IIx 2016-12-11T04:44:00.763877+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1663yj0369KbxV61z4GFvq6 ENCSR000BOY https://www.encodeproject.org/experiments/ENCSR000BOY transcription factor SIN3A-human PFSK-1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF543RMR https://www.encodeproject.org/files/ENCFF543RMR/@@download/ENCFF543RMR.bam ENCFF475XSW https://www.encodeproject.org/files/ENCFF475XSW/@@download/ENCFF475XSW.bam 37.3 M 0 33.2 M 0.889 SE 36 36 native 0.0 M 24.9 M 20.7 M 0.555 0.84 0.83 5.66 110 1.11 1.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/865e56f8-3901-4809-8b00-e6070e1c4bd5/@@download/cross_correlation_plot/ENCFF000QWH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JOE richard-myers:SL5041 ENCFF000QWH Illumina Genome Analyzer IIx 2016-12-11T04:57:31.586767+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1664480369BgG8x1ygv1XZP ENCSR000BQN https://www.encodeproject.org/experiments/ENCSR000BQN transcription factor TAF1-human PFSK-1 immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF662OCA https://www.encodeproject.org/files/ENCFF662OCA/@@download/ENCFF662OCA.bam ENCFF042UTA https://www.encodeproject.org/files/ENCFF042UTA/@@download/ENCFF042UTA.bam 8.6 M 0 7.4 M 0.861 SE 36 36 native 0.0 M 5.2 M 5.0 M 0.583 0.96 0.96 23.53 100 1.28 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/49d18e2f-d4ae-4df6-b094-77e7abf81785/@@download/cross_correlation_plot/ENCFF000QWN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFS richard-myers:SL3772 ENCFF000QWN Illumina Genome Analyzer IIx 2016-12-11T03:27:04.592578+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164qXj0369KbxV61z4GFvKp ENCSR000BQN https://www.encodeproject.org/experiments/ENCSR000BQN transcription factor TAF1-human PFSK-1 immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF608EGH https://www.encodeproject.org/files/ENCFF608EGH/@@download/ENCFF608EGH.bam ENCFF961BAD https://www.encodeproject.org/files/ENCFF961BAD/@@download/ENCFF961BAD.bam 46.9 M 0 42.0 M 0.896 SE 36 36 native 0.0 M 33.0 M 31.3 M 0.668 0.96 0.96 25.20 100 1.08 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/48b112bd-3f02-42ff-ad08-2b69043f8550/@@download/cross_correlation_plot/ENCFF000QWQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFT richard-myers:SL6969 ENCFF000QWQ Illumina Genome Analyzer IIx 2016-12-11T04:08:32.549844+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164qgj0369BgG8x1ygv1X7v ENCSR007GGB https://www.encodeproject.org/experiments/ENCSR007GGB control Control-human prostate gland tissue 1 richard-myers ENCODE3 GRCh38 ENCFF544LSH https://www.encodeproject.org/files/ENCFF544LSH/@@download/ENCFF544LSH.bam ENCFF428YBW https://www.encodeproject.org/files/ENCFF428YBW/@@download/ENCFF428YBW.bam 87.8 M 0 79.8 M 0.910 PE 76 76 native 33.3 M 0.0 M 31.3 M 0.714 0.94 0.94 17.80 140 1.05 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/51afd9b9-029d-413c-968f-3da4bc4a472c/@@download/cross_correlation_plot/ENCFF944LNCENCFF676OSC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB409EEU richard-myers:SL161491 "ENCFF944LNC,ENCFF676OSC" HiSeq 2000 2017-02-02T01:29:59.299672+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292G5j0369200gbFPKvPJB9 ENCSR467YGK https://www.encodeproject.org/experiments/ENCSR467YGK control Control-human prostate gland tissue 1 richard-myers ENCODE3 GRCh38 ENCFF286CKM https://www.encodeproject.org/files/ENCFF286CKM/@@download/ENCFF286CKM.bam ENCFF417EUS https://www.encodeproject.org/files/ENCFF417EUS/@@download/ENCFF417EUS.bam 79.4 M 0 72.9 M 0.918 PE 76 76 native 30.5 M 0.0 M 25.1 M 0.632 0.83 0.82 5.40 150 1.05 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/9b621e3a-80fb-49a8-b0d8-d294185c6b2d/@@download/cross_correlation_plot/ENCFF147IQPENCFF920XCV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB085KYL richard-myers:SL161496 "ENCFF147IQP,ENCFF920XCV" HiSeq 2000 2017-02-02T01:05:39.487224+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Jfj0369BJZqpFPF40XJq ENCSR689LFI https://www.encodeproject.org/experiments/ENCSR689LFI control Control-human prostate gland tissue 1 richard-myers ENCODE3 GRCh38 ENCFF801PHO https://www.encodeproject.org/files/ENCFF801PHO/@@download/ENCFF801PHO.bam ENCFF112ALH https://www.encodeproject.org/files/ENCFF112ALH/@@download/ENCFF112ALH.bam 107.6 M 0 98.2 M 0.913 PE 76 76 native 41.2 M 0.0 M 37.6 M 0.699 0.93 0.93 13.85 155 1.06 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed134389-b02b-4ad6-821b-0e9a98cbf841/@@download/cross_correlation_plot/ENCFF245ALBENCFF498AHD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB103BZA richard-myers:SL161490 "ENCFF498AHD,ENCFF245ALB" HiSeq 2000 2017-02-02T02:12:18.409110+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292v2003695y6gFJ6jy81KZ ENCSR912ZIY https://www.encodeproject.org/experiments/ENCSR912ZIY transcription factor EP300-human prostate gland tissue 1 richard-myers ENCODE3 GRCh38 ENCFF276QQO https://www.encodeproject.org/files/ENCFF276QQO/@@download/ENCFF276QQO.bam ENCFF876ISC https://www.encodeproject.org/files/ENCFF876ISC/@@download/ENCFF876ISC.bam 96.1 M 0 89.9 M 0.935 PE 76 76 native 35.9 M 0.0 M 27.3 M 0.567 0.76 0.76 3.95 185 1.07 3.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/4055649a-5f04-4922-88eb-031b7d213702/@@download/cross_correlation_plot/ENCFF957KBXENCFF944XPT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB866TLS richard-myers:SL161483 "ENCFF957KBX,ENCFF944XPT" HiSeq 2000 2017-02-02T01:40:53.167346+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2931kQ03695y6gFJ6jy81XJ ENCSR100FGR https://www.encodeproject.org/experiments/ENCSR100FGR control Control-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF736RDZ https://www.encodeproject.org/files/ENCFF736RDZ/@@download/ENCFF736RDZ.bam ENCFF476YAR https://www.encodeproject.org/files/ENCFF476YAR/@@download/ENCFF476YAR.bam 71.3 M 0 53.2 M 0.747 PE 76 76 native 20.5 M 0.0 M 20.1 M 0.564 0.98 0.98 52.80 270 1.01 0.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/14ac38c0-72f3-4818-b6ed-3dfc0dad73e9/@@download/cross_correlation_plot/ENCFF849CDIENCFF842SLH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB361IRF richard-myers:SL161393 "ENCFF842SLH,ENCFF849CDI" HiSeq 2000 2017-02-02T01:04:27.317377+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292bfj03695y6gFJ6jy8191 ENCSR185GDB https://www.encodeproject.org/experiments/ENCSR185GDB control Control-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF741GUI https://www.encodeproject.org/files/ENCFF741GUI/@@download/ENCFF741GUI.bam ENCFF048BXG https://www.encodeproject.org/files/ENCFF048BXG/@@download/ENCFF048BXG.bam 79.2 M 0 61.5 M 0.777 PE 76 76 native 24.1 M 0.0 M 23.6 M 0.597 0.98 0.98 64.45 295 1.01 0.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/b33870e6-61fe-4a19-bbfe-8c7c7ed86542/@@download/cross_correlation_plot/ENCFF184TJXENCFF035HZW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB381HOH richard-myers:SL161392 "ENCFF184TJX,ENCFF035HZW" HiSeq 2000 2017-02-02T01:23:50.160943+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293FgQ03698K796J5yq8Qq7 ENCSR190PGI https://www.encodeproject.org/experiments/ENCSR190PGI control Control-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF732BTH https://www.encodeproject.org/files/ENCFF732BTH/@@download/ENCFF732BTH.bam ENCFF424ZJU https://www.encodeproject.org/files/ENCFF424ZJU/@@download/ENCFF424ZJU.bam 160.8 M 0 119.2 M 0.741 PE 76 76 native 46.0 M 0.0 M 44.8 M 0.557 0.98 0.98 47.09 270 1.01 0.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7ef8aa0-291b-4fc3-af34-f40903cf08fe/@@download/cross_correlation_plot/ENCFF657PTTENCFF946FRP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB970ODC richard-myers:SL161398 "ENCFF657PTT,ENCFF946FRP" HiSeq 2000 2017-02-02T05:54:28.490732+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292f980369BpyVQJ710fvY2 ENCSR393DQE https://www.encodeproject.org/experiments/ENCSR393DQE control Control-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF973AOU https://www.encodeproject.org/files/ENCFF973AOU/@@download/ENCFF973AOU.bam ENCFF727FYV https://www.encodeproject.org/files/ENCFF727FYV/@@download/ENCFF727FYV.bam 299.3 M 0 218.4 M 0.729 PE 76 76 native 83.6 M 0.0 M 81.4 M 0.544 0.98 0.98 44.46 280 1.01 0.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/44e5607a-1c94-43ca-8400-7d88df588d34/@@download/cross_correlation_plot/ENCFF383VKCENCFF793LZO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB490EIV richard-myers:SL161394 "ENCFF793LZO,ENCFF383VKC" HiSeq 2000 2017-02-02T15:46:35.452312+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293VkQ0369BvG3VJ5qF22Pg ENCSR481ZPB https://www.encodeproject.org/experiments/ENCSR481ZPB control Control-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF762OSU https://www.encodeproject.org/files/ENCFF762OSU/@@download/ENCFF762OSU.bam ENCFF201DDV https://www.encodeproject.org/files/ENCFF201DDV/@@download/ENCFF201DDV.bam 70.7 M 0 55.1 M 0.780 PE 76 76 native 21.8 M 0.0 M 21.4 M 0.604 0.98 0.98 53.48 300 1.01 0.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/968aa763-c666-494e-a768-5ae153f8e2e4/@@download/cross_correlation_plot/ENCFF040RTOENCFF196GKM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB282IIO richard-myers:SL161395 "ENCFF196GKM,ENCFF040RTO" HiSeq 2000 2017-02-02T01:04:51.334162+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292qbQ03696Kgy2J6PFqv3g ENCSR509RYG https://www.encodeproject.org/experiments/ENCSR509RYG control Control-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF159MRR https://www.encodeproject.org/files/ENCFF159MRR/@@download/ENCFF159MRR.bam ENCFF885PKU https://www.encodeproject.org/files/ENCFF885PKU/@@download/ENCFF885PKU.bam 372.0 M 0 270.9 M 0.728 PE 76 76 native 103.6 M 0.0 M 101.4 M 0.545 0.98 0.98 57.98 290 1.00 0.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd8b0ac5-e36c-4144-a9aa-85531bca9d35/@@download/cross_correlation_plot/ENCFF875MBMENCFF267TPL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB751RUR richard-myers:SL161396 "ENCFF875MBM,ENCFF267TPL" HiSeq 2000 2017-02-02T19:12:22.407418+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292PZj03695y6gFJ6jy815g ENCSR576THU https://www.encodeproject.org/experiments/ENCSR576THU control Control-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF916QVZ https://www.encodeproject.org/files/ENCFF916QVZ/@@download/ENCFF916QVZ.bam ENCFF019HKT https://www.encodeproject.org/files/ENCFF019HKT/@@download/ENCFF019HKT.bam 75.1 M 0 58.7 M 0.782 PE 76 76 native 23.1 M 0.0 M 22.7 M 0.604 0.98 0.98 55.91 305 1.01 0.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad7b609a-d384-4d80-a100-fcc30d879a4d/@@download/cross_correlation_plot/ENCFF453QHYENCFF287ZTK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB720KFH richard-myers:SL161397 "ENCFF287ZTK,ENCFF453QHY" HiSeq 2000 2017-02-02T01:04:50.381493+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292X10036951p1PJ64F8fKB ENCSR883DDV https://www.encodeproject.org/experiments/ENCSR883DDV control Control-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF207QPG https://www.encodeproject.org/files/ENCFF207QPG/@@download/ENCFF207QPG.bam ENCFF542OIG https://www.encodeproject.org/files/ENCFF542OIG/@@download/ENCFF542OIG.bam 260.6 M 0 202.2 M 0.776 PE 76 76 native 69.4 M 0.0 M 67.1 M 0.515 0.97 0.97 37.95 100 1.06 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/03e61e20-8c06-485c-a85f-2d141523e4d1/@@download/cross_correlation_plot/ENCFF323QXBENCFF291KWD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB906LSH richard-myers:SL161399 "ENCFF291KWD,ENCFF323QXB" HiSeq 2000 2017-02-02T15:01:57.051514+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292xqj036951p1PJ64F8fg8 ENCSR244ZAO https://www.encodeproject.org/experiments/ENCSR244ZAO transcription factor EP300-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF187XIG https://www.encodeproject.org/files/ENCFF187XIG/@@download/ENCFF187XIG.bam ENCFF297HVO https://www.encodeproject.org/files/ENCFF297HVO/@@download/ENCFF297HVO.bam 117.9 M 0 104.4 M 0.885 PE 76 76 native 43.1 M 0.0 M 40.5 M 0.687 0.94 0.94 16.03 120 1.09 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/7e9c7b31-271d-4875-b53b-d086ee2b2409/@@download/cross_correlation_plot/ENCFF668XNAENCFF299MXH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB160EUD richard-myers:SL161384 "ENCFF299MXH,ENCFF668XNA" HiSeq 2000 2017-02-02T04:32:42.483059+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2937zj036951p1PJ64F8fvK ENCSR313BMV https://www.encodeproject.org/experiments/ENCSR313BMV transcription factor EP300-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF123JQA https://www.encodeproject.org/files/ENCFF123JQA/@@download/ENCFF123JQA.bam ENCFF665OQP https://www.encodeproject.org/files/ENCFF665OQP/@@download/ENCFF665OQP.bam 64.8 M 0 57.4 M 0.886 PE 76 76 native 23.6 M 0.0 M 22.7 M 0.701 0.96 0.96 25.71 105 1.10 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/f9454e51-7fc6-4c29-acbf-32173ea9b25f/@@download/cross_correlation_plot/ENCFF223CARENCFF680WFP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB293YZS richard-myers:SL161382 "ENCFF680WFP,ENCFF223CAR" HiSeq 2000 2017-02-02T01:05:22.889880+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292zB803693jxfkJ697fqvy ENCSR906UPC https://www.encodeproject.org/experiments/ENCSR906UPC transcription factor EP300-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF169HTN https://www.encodeproject.org/files/ENCFF169HTN/@@download/ENCFF169HTN.bam ENCFF219BLO https://www.encodeproject.org/files/ENCFF219BLO/@@download/ENCFF219BLO.bam 136.3 M 0 115.5 M 0.848 PE 76 76 native 47.3 M 0.0 M 43.0 M 0.632 0.91 0.91 10.80 130 1.12 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/ecc56369-59a3-48cb-a051-a2cf9cd0d03f/@@download/cross_correlation_plot/ENCFF717LYIENCFF871GPP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB411HCE richard-myers:SL161380 "ENCFF717LYI,ENCFF871GPP" HiSeq 2000 2017-02-02T05:49:02.807342+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293K1Q03695y6gFJ6jy81kk ENCSR923WJS https://www.encodeproject.org/experiments/ENCSR923WJS transcription factor EP300-human sigmoid colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF648SHM https://www.encodeproject.org/files/ENCFF648SHM/@@download/ENCFF648SHM.bam ENCFF322UWF https://www.encodeproject.org/files/ENCFF322UWF/@@download/ENCFF322UWF.bam 172.8 M 0 152.6 M 0.883 PE 76 76 native 62.4 M 0.0 M 57.7 M 0.668 0.93 0.92 13.17 130 1.05 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/10787e48-bda8-4f05-a13c-3ec2d97a13a6/@@download/cross_correlation_plot/ENCFF953YJKENCFF445QCX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB445SQE richard-myers:SL161386 "ENCFF445QCX,ENCFF953YJK" HiSeq 2000 2017-02-02T09:06:37.774286+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293Pqj0369BpyVQJ710fx8p ENCSR000BIX https://www.encodeproject.org/experiments/ENCSR000BIX control Control-human SK-N-MC immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF478FRJ https://www.encodeproject.org/files/ENCFF478FRJ/@@download/ENCFF478FRJ.bam ENCFF301NVQ https://www.encodeproject.org/files/ENCFF301NVQ/@@download/ENCFF301NVQ.bam 43.7 M 0 38.1 M 0.874 SE 36 36 native 0.0 M 29.0 M 28.7 M 0.659 0.99 0.99 174.43 135 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/b78c3935-6c87-44ef-acd3-0b7701139251/@@download/cross_correlation_plot/ENCFF000QXL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB053SNO richard-myers:SL1714.2 ENCFF000QXL Illumina Genome Analyzer IIx 2016-10-26T17:36:29.799199+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082YJj0369Bj2bF0JP9JJx1 ENCSR000BOD https://www.encodeproject.org/experiments/ENCSR000BOD control Control-human SK-N-MC immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF902AOQ https://www.encodeproject.org/files/ENCFF902AOQ/@@download/ENCFF902AOQ.bam ENCFF606FHK https://www.encodeproject.org/files/ENCFF606FHK/@@download/ENCFF606FHK.bam 12.0 M 0 8.4 M 0.699 SE 25 25 native 0.0 M 5.1 M 5.0 M 0.415 0.98 0.98 49.48 90 1.12 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4e6466f-2f5b-4c2e-97ce-2d629f70d8b6/@@download/cross_correlation_plot/ENCFF000QXN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDC richard-myers:SL102 ENCFF000QXN Illumina Genome Analyzer IIx 2016-10-26T17:42:08.243555+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820B00369KxbFbzV9pvvX0 ENCSR000BGB https://www.encodeproject.org/experiments/ENCSR000BGB transcription factor FOXP2-human SK-N-MC immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF450GSC https://www.encodeproject.org/files/ENCFF450GSC/@@download/ENCFF450GSC.bam ENCFF462QPA https://www.encodeproject.org/files/ENCFF462QPA/@@download/ENCFF462QPA.bam 21.5 M 0 17.6 M 0.816 SE 25 25 native 0.0 M 11.5 M 9.0 M 0.416 0.78 0.73 2.78 90 1.23 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/42547252-1fa2-40cf-8855-60ad75140d3d/@@download/cross_correlation_plot/ENCFF000QWY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JUZ richard-myers:SL144 ENCFF000QWY Illumina Genome Analyzer IIx 2016-12-13T18:36:57.228261+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F182v2Q03697yz601ypVJKzF ENCSR000BGB https://www.encodeproject.org/experiments/ENCSR000BGB transcription factor FOXP2-human SK-N-MC immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF034ZGA https://www.encodeproject.org/files/ENCFF034ZGA/@@download/ENCFF034ZGA.bam ENCFF438XDP https://www.encodeproject.org/files/ENCFF438XDP/@@download/ENCFF438XDP.bam 14.7 M 0 13.6 M 0.925 SE 25 25 native 0.0 M 9.0 M 8.8 M 0.597 0.98 0.98 44.87 90 1.26 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/ee1a2407-93b2-4a53-b1c5-30fe9607f831/@@download/cross_correlation_plot/ENCFF000QWW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAY richard-myers:SL167 ENCFF000QWW Illumina Genome Analyzer IIx 2016-12-13T18:37:52.320723+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F182vF00369F4yf5544b1Z5P ENCSR000BPL https://www.encodeproject.org/experiments/ENCSR000BPL "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human SK-N-MC immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF113PPG https://www.encodeproject.org/files/ENCFF113PPG/@@download/ENCFF113PPG.bam ENCFF509LZW https://www.encodeproject.org/files/ENCFF509LZW/@@download/ENCFF509LZW.bam 19.2 M 0 18.1 M 0.943 SE 36 36 native 0.0 M 14.5 M 13.4 M 0.698 0.92 0.94 19.13 160 1.98 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e6027ce-72d5-4010-81a2-0e3b9e5260cc/@@download/cross_correlation_plot/ENCFF000QWZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JFQ richard-myers:SL1963 ENCFF000QWZ Illumina Genome Analyzer IIx 2016-12-11T04:05:55.053087+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1658p803697k5jKB6pJ7qyP ENCSR000BPL https://www.encodeproject.org/experiments/ENCSR000BPL "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human SK-N-MC immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF680VQE https://www.encodeproject.org/files/ENCFF680VQE/@@download/ENCFF680VQE.bam ENCFF245BAO https://www.encodeproject.org/files/ENCFF245BAO/@@download/ENCFF245BAO.bam 48.3 M 0 43.0 M 0.890 SE 36 36 native 0.0 M 33.7 M 28.7 M 0.595 0.87 0.87 7.76 115 1.14 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/4eff6c7e-68b4-41be-bac4-da947765d835/@@download/cross_correlation_plot/ENCFF000QXE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAM richard-myers:SL5611 ENCFF000QXE Illumina Genome Analyzer IIx 2016-12-11T04:26:02.046357+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1658z80369PvYp91zK1PxQV ENCSR000BGN https://www.encodeproject.org/experiments/ENCSR000BGN control Control-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF154IKH https://www.encodeproject.org/files/ENCFF154IKH/@@download/ENCFF154IKH.bam ENCFF707NVX https://www.encodeproject.org/files/ENCFF707NVX/@@download/ENCFF707NVX.bam 20.3 M 0 13.0 M 0.641 SE 36 36 native 0.0 M 8.7 M 8.0 M 0.393 0.93 0.92 11.91 80 1.15 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/33ae1aff-1bd6-4326-ab70-66948d8773ac/@@download/cross_correlation_plot/ENCFF000RBV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIP richard-myers:SL108 ENCFF000RBV Illumina Genome Analyzer IIx 2016-10-26T17:38:59.001961+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0821GQ0369FFbbzvx9jvvjZ ENCSR000BGN https://www.encodeproject.org/experiments/ENCSR000BGN control Control-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF536CFH https://www.encodeproject.org/files/ENCFF536CFH/@@download/ENCFF536CFH.bam ENCFF423QEN https://www.encodeproject.org/files/ENCFF423QEN/@@download/ENCFF423QEN.bam 47.5 M 0 18.8 M 0.396 SE 36 36 native 0.0 M 10.3 M 10.1 M 0.212 0.98 0.98 57.89 95 1.09 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/f3d16d92-c761-463e-b9c8-e3880e5b78a2/@@download/cross_correlation_plot/ENCFF000RBY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIO richard-myers:SL410 ENCFF000RBY Illumina Genome Analyzer IIx 2016-10-26T17:40:16.474963+00:00 released requires lab review https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0821Q80369F7fQjy59kFgp9 ENCSR000BLQ https://www.encodeproject.org/experiments/ENCSR000BLQ control Control-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF077ITP https://www.encodeproject.org/files/ENCFF077ITP/@@download/ENCFF077ITP.bam ENCFF360VTI https://www.encodeproject.org/files/ENCFF360VTI/@@download/ENCFF360VTI.bam 29.3 M 0 27.9 M 0.952 SE 36 36 native 0.0 M 21.4 M 20.8 M 0.709 0.97 0.97 38.64 130 1.01 0.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf9c722c-68e9-4bcc-8bc9-ed668dfaf5ff/@@download/cross_correlation_plot/ENCFF000RGI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDJ richard-myers:SL2905 ENCFF000RGI Illumina Genome Analyzer IIx 2016-10-26T17:37:27.547519+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827P803697KPkyX9BPPq3G ENCSR000BPR https://www.encodeproject.org/experiments/ENCSR000BPR control Control-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF798ORT https://www.encodeproject.org/files/ENCFF798ORT/@@download/ENCFF798ORT.bam ENCFF379BDG https://www.encodeproject.org/files/ENCFF379BDG/@@download/ENCFF379BDG.bam 39.6 M 0 35.8 M 0.905 SE 36 36 native 0.0 M 26.3 M 26.1 M 0.659 0.99 0.99 170.17 125 1.01 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/3fb03486-7879-4b22-9aac-082bebeb0455/@@download/cross_correlation_plot/ENCFF000RCC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSV richard-myers:SL2134 ENCFF000RCC Illumina Genome Analyzer IIx 2016-10-26T17:38:39.771864+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826zj0369BX1xqb1B808g6 ENCSR000BPR https://www.encodeproject.org/experiments/ENCSR000BPR control Control-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF118ENS https://www.encodeproject.org/files/ENCFF118ENS/@@download/ENCFF118ENS.bam ENCFF932PJF https://www.encodeproject.org/files/ENCFF932PJF/@@download/ENCFF932PJF.bam 35.2 M 0 32.9 M 0.934 SE 36 36 native 0.0 M 25.2 M 24.5 M 0.695 0.97 0.97 36.67 165 1.01 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/3b47c141-1d95-4fe0-85e8-9d198f722f37/@@download/cross_correlation_plot/ENCFF000RCB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSG richard-myers:SL3774 ENCFF000RCB Illumina Genome Analyzer IIx 2016-10-26T17:38:34.328023+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08275803695140QP5B2vffK ENCSR000BPR https://www.encodeproject.org/experiments/ENCSR000BPR control Control-human SK-N-SH immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF383VZK https://www.encodeproject.org/files/ENCFF383VZK/@@download/ENCFF383VZK.bam ENCFF114QIU https://www.encodeproject.org/files/ENCFF114QIU/@@download/ENCFF114QIU.bam 33.5 M 0 31.3 M 0.935 SE 36 36 native 0.0 M 24.6 M 22.5 M 0.673 0.92 0.92 12.49 115 1.02 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/f31dcca8-3deb-4fc6-85a7-6bfc648eabf4/@@download/cross_correlation_plot/ENCFF000RCF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSU richard-myers:SL3775 ENCFF000RCF Illumina Genome Analyzer IIx 2016-10-26T17:37:57.313772+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0827B00369GJ6xQfbB7BkPP ENCSR000BVW https://www.encodeproject.org/experiments/ENCSR000BVW control Control-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF418OXF https://www.encodeproject.org/files/ENCFF418OXF/@@download/ENCFF418OXF.bam ENCFF188OKO https://www.encodeproject.org/files/ENCFF188OKO/@@download/ENCFF188OKO.bam 21.3 M 0 20.6 M 0.966 SE 50 50 native 0.0 M 16.8 M 16.4 M 0.769 0.99 0.99 156.68 110 1.05 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/cce44909-0cb8-4bd8-aafe-5f749e37b44c/@@download/cross_correlation_plot/ENCFF000RCK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNE richard-myers:SL12791 ENCFF000RCK HiSeq 2000 2016-11-30T18:18:39.218559+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0yyG10036985fFbV0Z7XxX6 ENCSR000BVW https://www.encodeproject.org/experiments/ENCSR000BVW control Control-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF151DBS https://www.encodeproject.org/files/ENCFF151DBS/@@download/ENCFF151DBS.bam ENCFF229SZJ https://www.encodeproject.org/files/ENCFF229SZJ/@@download/ENCFF229SZJ.bam 33.4 M 0 30.5 M 0.913 SE 50 50 native 0.0 M 23.8 M 23.4 M 0.700 0.99 0.99 125.85 65 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/1009bc78-3bc1-4c73-8330-5a7f98c09945/@@download/cross_correlation_plot/ENCFF000RCP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JNC richard-myers:SL16760 ENCFF000RCP HiSeq 2000 2016-11-30T18:19:12.583762+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0yyG680369159JzpxQx4gPX ENCSR000BVW https://www.encodeproject.org/experiments/ENCSR000BVW control Control-human SK-N-SH immortalized cell line 3 richard-myers ENCODE2 GRCh38 ENCFF814RKK https://www.encodeproject.org/files/ENCFF814RKK/@@download/ENCFF814RKK.bam ENCFF493NIV https://www.encodeproject.org/files/ENCFF493NIV/@@download/ENCFF493NIV.bam 31.4 M 0 29.9 M 0.952 SE 50 50 native 0.0 M 24.4 M 23.9 M 0.762 0.99 0.99 165.21 65 1.03 1.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/858ec789-3800-4dac-863d-63cb0e848719/@@download/cross_correlation_plot/ENCFF000RCM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KDY richard-myers:SL13505 ENCFF000RCM HiSeq 2000 2016-11-30T18:19:13.404584+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0yyGFj0369BZFBbVv6KFFqX ENCSR000BVW https://www.encodeproject.org/experiments/ENCSR000BVW control Control-human SK-N-SH immortalized cell line 4 richard-myers ENCODE2 GRCh38 ENCFF671TWU https://www.encodeproject.org/files/ENCFF671TWU/@@download/ENCFF671TWU.bam ENCFF660VDB https://www.encodeproject.org/files/ENCFF660VDB/@@download/ENCFF660VDB.bam 29.1 M 0 25.6 M 0.880 SE 50 50 native 0.0 M 18.6 M 18.2 M 0.626 0.99 0.99 119.09 225 1.01 0.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/c743ad02-cbee-4bcf-8496-c7208290074e/@@download/cross_correlation_plot/ENCFF000RCT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAT richard-myers:SL16761 ENCFF000RCT HiSeq 2000 2016-11-30T18:19:08.283279+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0yyGV803699j10QBk369VZK ENCSR000BLX https://www.encodeproject.org/experiments/ENCSR000BLX "transcription factor,RNA binding protein" CTCF-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF189GFZ https://www.encodeproject.org/files/ENCFF189GFZ/@@download/ENCFF189GFZ.bam ENCFF453HFQ https://www.encodeproject.org/files/ENCFF453HFQ/@@download/ENCFF453HFQ.bam 17.1 M 0 15.1 M 0.882 SE 36 36 native 0.0 M 11.7 M 9.9 M 0.580 0.85 0.85 6.61 105 2.55 2.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/35ea99a7-17b5-4828-946c-2253d2f88c0b/@@download/cross_correlation_plot/ENCFF000RFI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHX richard-myers:SL2906 ENCFF000RFI Illumina Genome Analyzer IIx 2016-12-11T03:23:17.800614+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164g4Q0369PvYp91zK1PxFY ENCSR000BLX https://www.encodeproject.org/experiments/ENCSR000BLX "transcription factor,RNA binding protein" CTCF-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF132NVE https://www.encodeproject.org/files/ENCFF132NVE/@@download/ENCFF132NVE.bam ENCFF631KKX https://www.encodeproject.org/files/ENCFF631KKX/@@download/ENCFF631KKX.bam 21.9 M 0 14.8 M 0.676 SE 36 36 native 0.0 M 11.6 M 6.8 M 0.312 0.59 0.57 2.12 80 4.94 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/e85f353f-78bc-4274-8684-267cffb70099/@@download/cross_correlation_plot/ENCFF000RFO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JHW richard-myers:SL2914 ENCFF000RFO Illumina Genome Analyzer IIx 2016-12-11T03:27:47.836324+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164g9Q03697k5jKB6pJ7qv6 ENCSR000BTA https://www.encodeproject.org/experiments/ENCSR000BTA transcription factor ELF1-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BMA https://www.encodeproject.org/experiments/ENCSR000BMA transcription factor EP300-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF546TVD https://www.encodeproject.org/files/ENCFF546TVD/@@download/ENCFF546TVD.bam ENCFF448JFW https://www.encodeproject.org/files/ENCFF448JFW/@@download/ENCFF448JFW.bam 29.3 M 0 25.2 M 0.858 SE 36 36 native 0.0 M 19.9 M 15.6 M 0.534 0.79 0.79 4.59 110 1.92 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/d66c0ac0-57e8-4b2d-acad-3a920d1e2ece/@@download/cross_correlation_plot/ENCFF000RFU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXN richard-myers:SL2910 ENCFF000RFU Illumina Genome Analyzer IIx 2016-12-11T04:38:35.869349+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165p3003697vfpg2qKbyZYJ ENCSR000BMA https://www.encodeproject.org/experiments/ENCSR000BMA transcription factor EP300-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF683OAK https://www.encodeproject.org/files/ENCFF683OAK/@@download/ENCFF683OAK.bam ENCFF299TUJ https://www.encodeproject.org/files/ENCFF299TUJ/@@download/ENCFF299TUJ.bam 19.4 M 0 16.5 M 0.851 SE 36 36 native 0.0 M 13.2 M 11.2 M 0.578 0.85 0.85 6.75 115 2.13 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/0314644d-9383-4079-9d0b-f79d7d37d641/@@download/cross_correlation_plot/ENCFF000RFV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXO richard-myers:SL2918 ENCFF000RFV Illumina Genome Analyzer IIx 2016-12-11T04:33:37.228868+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165p80036993F1b953B4Q5y ENCSR000BUA https://www.encodeproject.org/experiments/ENCSR000BUA transcription factor EP300-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BVB https://www.encodeproject.org/experiments/ENCSR000BVB transcription factor FOSL2-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BTB https://www.encodeproject.org/experiments/ENCSR000BTB transcription factor FOXM1-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BTG https://www.encodeproject.org/experiments/ENCSR000BTG transcription factor GABPA-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BTH https://www.encodeproject.org/experiments/ENCSR000BTH transcription factor GATA3-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSK https://www.encodeproject.org/experiments/ENCSR000BSK transcription factor JUND-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF507TFC https://www.encodeproject.org/files/ENCFF507TFC/@@download/ENCFF507TFC.bam ENCFF129GZZ https://www.encodeproject.org/files/ENCFF129GZZ/@@download/ENCFF129GZZ.bam 30.3 M 0 29.2 M 0.962 SE 50 50 native 0.0 M 25.1 M 23.8 M 0.785 0.95 0.96 22.92 120 1.26 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/ddb6a09f-535c-432d-b72b-029450068c67/@@download/cross_correlation_plot/ENCFF000QZG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXF richard-myers:SL13079 ENCFF000QZG HiSeq 2000 2016-11-30T18:11:52.826599+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4X0Q0369GX7qVG137j8p2 ENCSR000BSK https://www.encodeproject.org/experiments/ENCSR000BSK transcription factor JUND-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF697VPH https://www.encodeproject.org/files/ENCFF697VPH/@@download/ENCFF697VPH.bam ENCFF880NAC https://www.encodeproject.org/files/ENCFF880NAC/@@download/ENCFF880NAC.bam 50.7 M 0 48.0 M 0.948 SE 50 50 native 0.0 M 40.0 M 37.5 M 0.741 0.95 0.95 19.83 110 1.10 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd0e4f1e-c887-428d-b930-1921a0ed2392/@@download/cross_correlation_plot/ENCFF000QZK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCY richard-myers:SL14042 ENCFF000QZK HiSeq 2000 2016-11-30T18:13:31.366825+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4X6803699j10QBk369B6K ENCSR000BVD https://www.encodeproject.org/experiments/ENCSR000BVD transcription factor MAX-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BVC https://www.encodeproject.org/experiments/ENCSR000BVC transcription factor MEF2A-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BSV https://www.encodeproject.org/experiments/ENCSR000BSV transcription factor NFIC-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BVE https://www.encodeproject.org/experiments/ENCSR000BVE transcription factor PBX3-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BPA https://www.encodeproject.org/experiments/ENCSR000BPA "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF100TXJ https://www.encodeproject.org/files/ENCFF100TXJ/@@download/ENCFF100TXJ.bam ENCFF349HCP https://www.encodeproject.org/files/ENCFF349HCP/@@download/ENCFF349HCP.bam 19.5 M 0 18.2 M 0.932 SE 36 36 native 0.0 M 14.5 M 13.9 M 0.711 0.96 0.96 26.24 90 1.36 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/25848735-47d9-4db2-9d63-c33828e26286/@@download/cross_correlation_plot/ENCFF000RBN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWV richard-myers:SL3768 ENCFF000RBN Illumina Genome Analyzer IIx 2016-12-10T20:40:56.842098+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162y4803698ZxQY8q63X7zY ENCSR000BPA https://www.encodeproject.org/experiments/ENCSR000BPA "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF521NVH https://www.encodeproject.org/files/ENCFF521NVH/@@download/ENCFF521NVH.bam ENCFF324PAU https://www.encodeproject.org/files/ENCFF324PAU/@@download/ENCFF324PAU.bam 44.4 M 0 39.8 M 0.897 SE 36 36 native 0.0 M 31.9 M 28.9 M 0.652 0.92 0.92 13.40 115 1.27 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/36c49df1-a54f-40d8-9daf-cf6456d8a994/@@download/cross_correlation_plot/ENCFF000RBS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JRV richard-myers:SL5607 ENCFF000RBS Illumina Genome Analyzer IIx 2016-12-10T21:17:39.379378+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162y9003692pJ09J76g5fkX ENCSR000BLY https://www.encodeproject.org/experiments/ENCSR000BLY transcription factor RAD21-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF928HIN https://www.encodeproject.org/files/ENCFF928HIN/@@download/ENCFF928HIN.bam ENCFF385TLD https://www.encodeproject.org/files/ENCFF385TLD/@@download/ENCFF385TLD.bam 34.2 M 0 29.5 M 0.862 SE 36 36 native 0.0 M 24.4 M 15.8 M 0.462 0.65 0.74 4.70 120 4.42 2.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd17baa9-83cd-4260-b5a8-978965d077d9/@@download/cross_correlation_plot/ENCFF000RGA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKK richard-myers:SL2907 ENCFF000RGA Illumina Genome Analyzer IIx 2016-12-12T17:18:00.513526+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16251j036969X0jJ6p3ffK7 ENCSR000BLY https://www.encodeproject.org/experiments/ENCSR000BLY transcription factor RAD21-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF903WEP https://www.encodeproject.org/files/ENCFF903WEP/@@download/ENCFF903WEP.bam ENCFF988FFU https://www.encodeproject.org/files/ENCFF988FFU/@@download/ENCFF988FFU.bam 34.6 M 0 31.1 M 0.898 SE 36 36 native 0.0 M 26.1 M 19.1 M 0.550 0.73 0.79 5.71 100 3.34 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/a2e289ba-2197-450a-b053-1bc78d079378/@@download/cross_correlation_plot/ENCFF000RGF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKL richard-myers:SL2915 ENCFF000RGF Illumina Genome Analyzer IIx 2016-12-12T17:17:50.954811+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16256003690xXYVJ7Fj2bp4 ENCSR000BJJ https://www.encodeproject.org/experiments/ENCSR000BJJ "transcription factor,chromatin remodeller" REST-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF347EJI https://www.encodeproject.org/files/ENCFF347EJI/@@download/ENCFF347EJI.bam ENCFF765AGL https://www.encodeproject.org/files/ENCFF765AGL/@@download/ENCFF765AGL.bam 35.2 M 0 18.2 M 0.516 SE 36 32 32 0.0 M 11.6 M 10.9 M 0.309 0.95 0.95 21.86 85 1.27 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/a4596cff-7c67-491c-af93-7f8f18e85b1d/@@download/cross_correlation_plot/ENCFF000RAL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KED richard-myers:SL83 ENCFF000RAL Illumina Genome Analyzer IIx 2016-12-13T03:34:18.499929+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zxpj03696z7JqGk4Z07G2 ENCSR000BJJ https://www.encodeproject.org/experiments/ENCSR000BJJ "transcription factor,chromatin remodeller" REST-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF523AMT https://www.encodeproject.org/files/ENCFF523AMT/@@download/ENCFF523AMT.bam ENCFF100IEA https://www.encodeproject.org/files/ENCFF100IEA/@@download/ENCFF100IEA.bam 45.2 M 0 22.4 M 0.495 SE 36 32 32 0.0 M 14.2 M 13.1 M 0.291 0.93 0.95 25.56 90 1.60 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/94d6931f-109e-44c0-9ce2-9476c624572d/@@download/cross_correlation_plot/ENCFF000RAO-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWX richard-myers:SL409 ENCFF000RAO Illumina Genome Analyzer IIx 2016-12-13T03:44:01.419595+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zyj8036904pZZ8v3bky1b ENCSR000BOZ https://www.encodeproject.org/experiments/ENCSR000BOZ "transcription factor,chromatin remodeller" REST-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF247ZIP https://www.encodeproject.org/files/ENCFF247ZIP/@@download/ENCFF247ZIP.bam ENCFF959UTG https://www.encodeproject.org/files/ENCFF959UTG/@@download/ENCFF959UTG.bam 26.2 M 0 21.9 M 0.836 SE 36 36 native 0.0 M 16.7 M 12.2 M 0.467 0.73 0.78 4.50 115 1.86 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e43eebb-6ab5-4ed6-9014-25d38fdc9301/@@download/cross_correlation_plot/ENCFF000RAT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSY richard-myers:SL5494 ENCFF000RAT Illumina Genome Analyzer IIx 2016-12-11T02:55:29.455906+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1645Z003699Z3Y8493qbq1K ENCSR000BOZ https://www.encodeproject.org/experiments/ENCSR000BOZ "transcription factor,chromatin remodeller" REST-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF705JKT https://www.encodeproject.org/files/ENCFF705JKT/@@download/ENCFF705JKT.bam ENCFF968TGT https://www.encodeproject.org/files/ENCFF968TGT/@@download/ENCFF968TGT.bam 36.0 M 0 28.9 M 0.804 SE 36 36 native 0.0 M 21.1 M 17.5 M 0.486 0.84 0.84 6.26 100 1.24 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/6971da89-3f3e-4bfe-8f88-a014e170ec3c/@@download/cross_correlation_plot/ENCFF000RAW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JSQ richard-myers:SL5896 ENCFF000RAW Illumina Genome Analyzer IIx 2016-12-11T03:02:52.629196+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1645k803697K4B1J71pxzzF ENCSR000BVG https://www.encodeproject.org/experiments/ENCSR000BVG transcription factor RXRA-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BPB https://www.encodeproject.org/experiments/ENCSR000BPB transcription factor SIN3A-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF538TLU https://www.encodeproject.org/files/ENCFF538TLU/@@download/ENCFF538TLU.bam ENCFF131FSC https://www.encodeproject.org/files/ENCFF131FSC/@@download/ENCFF131FSC.bam 38.2 M 0 33.4 M 0.874 SE 36 36 native 0.0 M 25.2 M 13.8 M 0.363 0.56 0.50 1.66 110 1.15 3.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd072b4b-28a9-4a59-bcd6-bfe9105d1e07/@@download/cross_correlation_plot/ENCFF000RDJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKX richard-myers:SL5043 ENCFF000RDJ Illumina Genome Analyzer IIx 2016-12-10T19:50:12.079545+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Qj003697k5jKB6pJ7qfP ENCSR000BPB https://www.encodeproject.org/experiments/ENCSR000BPB transcription factor SIN3A-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF253FOO https://www.encodeproject.org/files/ENCFF253FOO/@@download/ENCFF253FOO.bam ENCFF046VFA https://www.encodeproject.org/files/ENCFF046VFA/@@download/ENCFF046VFA.bam 39.5 M 0 30.1 M 0.760 SE 36 36 native 0.0 M 21.9 M 18.1 M 0.457 0.87 0.86 7.15 120 1.19 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/9ee887da-f383-40ba-8179-831fd62c4c27/@@download/cross_correlation_plot/ENCFF000RDL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JIE richard-myers:SL5895 ENCFF000RDL Illumina Genome Analyzer IIx 2016-12-10T19:48:14.140694+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Qvj0369BV55708G9qb8K ENCSR000BQF https://www.encodeproject.org/experiments/ENCSR000BQF transcription factor TAF1-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF511XTS https://www.encodeproject.org/files/ENCFF511XTS/@@download/ENCFF511XTS.bam ENCFF958VAF https://www.encodeproject.org/files/ENCFF958VAF/@@download/ENCFF958VAF.bam 40.3 M 0 34.3 M 0.851 SE 36 36 native 0.0 M 26.3 M 18.3 M 0.455 0.73 0.71 3.32 110 1.13 3.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/c16b76f5-d1ae-4917-a101-6f02f43070d3/@@download/cross_correlation_plot/ENCFF000RDS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKI richard-myers:SL5612 ENCFF000RDS Illumina Genome Analyzer IIx 2016-12-10T22:20:25.893832+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1636x8036969X0jJ6p3ffYg ENCSR000BQF https://www.encodeproject.org/experiments/ENCSR000BQF transcription factor TAF1-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF316XFH https://www.encodeproject.org/files/ENCFF316XFH/@@download/ENCFF316XFH.bam ENCFF833WOK https://www.encodeproject.org/files/ENCFF833WOK/@@download/ENCFF833WOK.bam 40.2 M 0 29.1 M 0.723 SE 36 36 native 0.0 M 20.9 M 16.2 M 0.404 0.82 0.81 5.22 100 1.36 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1d318f9-9ef1-477e-a569-fce34d3a6ee7/@@download/cross_correlation_plot/ENCFF000RDR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JKJ richard-myers:SL6462 ENCFF000RDR Illumina Genome Analyzer IIx 2016-12-10T22:06:37.704084+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1637280369KbxV61z4GFv7q ENCSR000BSL https://www.encodeproject.org/experiments/ENCSR000BSL transcription factor TCF12-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BUQ https://www.encodeproject.org/experiments/ENCSR000BUQ transcription factor TEAD4-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BMF https://www.encodeproject.org/experiments/ENCSR000BMF transcription factor USF1-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF982TSB https://www.encodeproject.org/files/ENCFF982TSB/@@download/ENCFF982TSB.bam ENCFF383FRS https://www.encodeproject.org/files/ENCFF383FRS/@@download/ENCFF383FRS.bam 25.7 M 0 23.3 M 0.905 SE 36 36 native 0.0 M 18.3 M 10.4 M 0.403 0.57 0.56 2.06 115 2.39 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/81867adc-7a1e-402e-9637-9ea6c6e854d4/@@download/cross_correlation_plot/ENCFF000RGQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JPK richard-myers:SL2911 ENCFF000RGQ Illumina Genome Analyzer IIx 2016-12-11T02:47:30.239698+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164320036969X0jJ6p3ffp0 ENCSR000BMF https://www.encodeproject.org/experiments/ENCSR000BMF transcription factor USF1-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF434GLS https://www.encodeproject.org/files/ENCFF434GLS/@@download/ENCFF434GLS.bam ENCFF387RDF https://www.encodeproject.org/files/ENCFF387RDF/@@download/ENCFF387RDF.bam 14.3 M 0 12.6 M 0.885 SE 36 36 native 0.0 M 9.7 M 6.6 M 0.459 0.68 0.69 3.17 125 3.56 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/8836bc13-f477-4373-83ad-272043984214/@@download/cross_correlation_plot/ENCFF000RGM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JQE richard-myers:SL2919 ENCFF000RGM Illumina Genome Analyzer IIx 2016-12-11T02:30:58.524423+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164368036933PVVJ7Qq01Vq ENCSR000BTZ https://www.encodeproject.org/experiments/ENCSR000BTZ transcription factor USF1-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BLZ https://www.encodeproject.org/experiments/ENCSR000BLZ transcription factor YY1-human SK-N-SH immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF660NOK https://www.encodeproject.org/files/ENCFF660NOK/@@download/ENCFF660NOK.bam ENCFF621QHK https://www.encodeproject.org/files/ENCFF621QHK/@@download/ENCFF621QHK.bam 27.2 M 0 25.0 M 0.919 SE 36 36 native 0.0 M 19.2 M 17.3 M 0.635 0.90 0.92 12.86 125 1.44 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/96862030-b0bd-42fd-8dcf-816bd535a62d/@@download/cross_correlation_plot/ENCFF000RGV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBE richard-myers:SL3639 ENCFF000RGV Illumina Genome Analyzer IIx 2016-12-11T03:19:55.969355+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164QzQ0369GF0YB1zjPf6b2 ENCSR000BLZ https://www.encodeproject.org/experiments/ENCSR000BLZ transcription factor YY1-human SK-N-SH immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF382TBW https://www.encodeproject.org/files/ENCFF382TBW/@@download/ENCFF382TBW.bam ENCFF258QFE https://www.encodeproject.org/files/ENCFF258QFE/@@download/ENCFF258QFE.bam 40.4 M 0 36.6 M 0.906 SE 36 36 native 0.0 M 27.9 M 24.2 M 0.600 0.87 0.89 9.15 125 1.32 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/51043f4a-eb99-4484-bc2e-bcea54888f63/@@download/cross_correlation_plot/ENCFF000RGY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JEN richard-myers:SL3640 ENCFF000RGY Illumina Genome Analyzer IIx 2016-12-11T03:38:29.148955+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164V4Q0369GF0YB1zjPf6bF ENCSR000BSM https://www.encodeproject.org/experiments/ENCSR000BSM transcription factor YY1-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR000BTS https://www.encodeproject.org/experiments/ENCSR000BTS transcription factor ZBTB33-human SK-N-SH immortalized cell line richard-myers ENCODE2 pending SE 50 HiSeq 2000 unreviewed ENCSR384HXX https://www.encodeproject.org/experiments/ENCSR384HXX control Control-human spleen tissue 1 richard-myers ENCODE3 GRCh38 ENCFF603BPO https://www.encodeproject.org/files/ENCFF603BPO/@@download/ENCFF603BPO.bam ENCFF928MXV https://www.encodeproject.org/files/ENCFF928MXV/@@download/ENCFF928MXV.bam 84.9 M 0 74.1 M 0.873 PE 76 76 native 30.0 M 0.0 M 29.0 M 0.683 0.97 0.97 29.49 145 1.08 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/000d6e55-292d-49f2-9b11-7d7527caa0c8/@@download/cross_correlation_plot/ENCFF847SHOENCFF386SNG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB893TFX richard-myers:SL161581 "ENCFF386SNG,ENCFF847SHO" HiSeq 2000 2017-02-02T01:48:11.452272+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2937G8036951p1PJ64F8fv2 ENCSR512MNA https://www.encodeproject.org/experiments/ENCSR512MNA control Control-human spleen tissue 1 richard-myers ENCODE3 GRCh38 ENCFF803PDD https://www.encodeproject.org/files/ENCFF803PDD/@@download/ENCFF803PDD.bam ENCFF088MWO https://www.encodeproject.org/files/ENCFF088MWO/@@download/ENCFF088MWO.bam 142.3 M 0 121.5 M 0.854 PE 76 76 native 49.2 M 0.0 M 47.3 M 0.665 0.96 0.96 26.93 90 1.05 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c47255f-251a-477e-8cd6-7a44b252291d/@@download/cross_correlation_plot/ENCFF371ASLENCFF631HIV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB177VHP richard-myers:SL161584 "ENCFF371ASL,ENCFF631HIV" HiSeq 2000 2017-02-02T05:11:00.937595+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Kj80369BpyVQJ710fbYK ENCSR936XMR https://www.encodeproject.org/experiments/ENCSR936XMR control Control-human spleen tissue 1 richard-myers ENCODE3 GRCh38 ENCFF481ALK https://www.encodeproject.org/files/ENCFF481ALK/@@download/ENCFF481ALK.bam ENCFF618DFR https://www.encodeproject.org/files/ENCFF618DFR/@@download/ENCFF618DFR.bam 63.2 M 0 54.4 M 0.862 PE 76 76 native 22.2 M 0.0 M 21.5 M 0.681 0.97 0.97 32.71 90 1.10 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8e050f3-fa54-4fb6-8e7d-6d3a5add9644/@@download/cross_correlation_plot/ENCFF267WYTENCFF953BWE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB987SHU richard-myers:SL161583 "ENCFF267WYT,ENCFF953BWE" HiSeq 2000 2017-02-02T01:05:02.874583+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293FVQ0369BpyVQJ710fx6F ENCSR493PYN https://www.encodeproject.org/experiments/ENCSR493PYN control Control-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF327LUK https://www.encodeproject.org/files/ENCFF327LUK/@@download/ENCFF327LUK.bam ENCFF742YLF https://www.encodeproject.org/files/ENCFF742YLF/@@download/ENCFF742YLF.bam 92.2 M 0 78.0 M 0.846 PE 76 76 native 30.9 M 0.0 M 30.3 M 0.658 0.98 0.98 64.76 300 1.01 0.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/41c55797-4442-42f8-bd7c-50e96257e361/@@download/cross_correlation_plot/ENCFF194AYRENCFF844ZDM.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB338AYQ richard-myers:SL161324 "ENCFF844ZDM,ENCFF194AYR" HiSeq 2000 2016-11-08T22:48:13.130711+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYj8803691z1J9q5qKfvbp ENCSR516EKI https://www.encodeproject.org/experiments/ENCSR516EKI control Control-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF574AFD https://www.encodeproject.org/files/ENCFF574AFD/@@download/ENCFF574AFD.bam ENCFF904QGZ https://www.encodeproject.org/files/ENCFF904QGZ/@@download/ENCFF904QGZ.bam 81.0 M 0 70.4 M 0.869 PE 76 76 native 28.4 M 0.0 M 27.7 M 0.685 0.98 0.98 47.05 90 1.08 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9fe6747-20bc-4f78-9b89-2478c42f41a4/@@download/cross_correlation_plot/ENCFF636HNDENCFF049HLF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB146EMT richard-myers:SL161321 "ENCFF636HND,ENCFF049HLF" HiSeq 2000 2016-11-08T22:47:36.303964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYjY00369FqvPFx5q886p7 ENCSR637MGJ https://www.encodeproject.org/experiments/ENCSR637MGJ control Control-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF410CDQ https://www.encodeproject.org/files/ENCFF410CDQ/@@download/ENCFF410CDQ.bam ENCFF586DWA https://www.encodeproject.org/files/ENCFF586DWA/@@download/ENCFF586DWA.bam 190.6 M 0 158.8 M 0.833 PE 76 76 native 62.6 M 0.0 M 61.2 M 0.643 0.98 0.98 52.53 90 1.05 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/12d5246b-8184-4c8b-a313-b40cf0f0dda5/@@download/cross_correlation_plot/ENCFF224JZMENCFF151KQH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB143CYZ richard-myers:SL161317 "ENCFF224JZM,ENCFF151KQH" HiSeq 2000 2016-11-08T22:55:54.903596+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYfG00369PJxfVGQp32bZ1 ENCSR804FRO https://www.encodeproject.org/experiments/ENCSR804FRO control Control-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF248TLI https://www.encodeproject.org/files/ENCFF248TLI/@@download/ENCFF248TLI.bam ENCFF144QHN https://www.encodeproject.org/files/ENCFF144QHN/@@download/ENCFF144QHN.bam 104.6 M 0 91.2 M 0.872 PE 76 76 native 36.2 M 0.0 M 35.5 M 0.679 0.98 0.98 55.43 90 1.07 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/9cfc0ea7-84ed-4dad-9455-41b2e7c87646/@@download/cross_correlation_plot/ENCFF877SGGENCFF332OUJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB611MQG richard-myers:SL161319 "ENCFF877SGG,ENCFF332OUJ" HiSeq 2000 2016-11-08T22:48:48.910405+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYgGj03695gKVkvJqG3f1f ENCSR864PNP https://www.encodeproject.org/experiments/ENCSR864PNP control Control-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF194FBM https://www.encodeproject.org/files/ENCFF194FBM/@@download/ENCFF194FBM.bam ENCFF880GGZ https://www.encodeproject.org/files/ENCFF880GGZ/@@download/ENCFF880GGZ.bam 117.6 M 0 99.0 M 0.842 PE 76 76 native 38.9 M 0.0 M 38.3 M 0.652 0.99 0.99 74.25 90 1.07 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/2cb10a68-4259-49f6-9ae8-d2df658da333/@@download/cross_correlation_plot/ENCFF502QEUENCFF495BLX.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB981KYU richard-myers:SL161320 "ENCFF502QEU,ENCFF495BLX" HiSeq 2000 2016-11-08T22:49:38.418428+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYgXQ036962J3vkxqKZxjg ENCSR890ONE https://www.encodeproject.org/experiments/ENCSR890ONE control Control-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF238HZC https://www.encodeproject.org/files/ENCFF238HZC/@@download/ENCFF238HZC.bam ENCFF908NWF https://www.encodeproject.org/files/ENCFF908NWF/@@download/ENCFF908NWF.bam 117.4 M 0 100.5 M 0.856 PE 76 76 native 40.1 M 0.0 M 39.3 M 0.670 0.98 0.98 58.05 90 1.07 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba7bab65-e74d-4d7c-9a4b-666084ee2072/@@download/cross_correlation_plot/ENCFF424UYBENCFF550VPF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB830ZJO richard-myers:SL161318 "ENCFF424UYB,ENCFF550VPF" HiSeq 2000 2016-11-08T22:49:59.789379+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYfVQ03697Jv2GB4p4YGfX ENCSR905UJI https://www.encodeproject.org/experiments/ENCSR905UJI control Control-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF389BHC https://www.encodeproject.org/files/ENCFF389BHC/@@download/ENCFF389BHC.bam ENCFF950UMA https://www.encodeproject.org/files/ENCFF950UMA/@@download/ENCFF950UMA.bam 230.2 M 0 198.7 M 0.863 PE 76 76 native 79.1 M 0.0 M 77.7 M 0.675 0.98 0.98 59.72 90 1.04 1.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/ff5b96fb-5bb0-4a3f-82ec-27e8758362a3/@@download/cross_correlation_plot/ENCFF474NYUENCFF010ENO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB557NCF richard-myers:SL161322 "ENCFF010ENO,ENCFF474NYU" HiSeq 2000 2016-11-08T22:58:57.400372+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYfgj0369448Z3JGpJkb5k ENCSR228ZPZ https://www.encodeproject.org/experiments/ENCSR228ZPZ transcription factor EP300-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF855BDE https://www.encodeproject.org/files/ENCFF855BDE/@@download/ENCFF855BDE.bam ENCFF734WEC https://www.encodeproject.org/files/ENCFF734WEC/@@download/ENCFF734WEC.bam 108.2 M 0 95.7 M 0.884 PE 76 76 native 38.3 M 0.0 M 35.9 M 0.664 0.94 0.94 15.86 120 1.06 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9c81f8e-8057-4fd5-a00d-2e1a84d847c1/@@download/cross_correlation_plot/ENCFF682QTOENCFF203YAZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB351NXB richard-myers:SL161333 "ENCFF203YAZ,ENCFF682QTO" HiSeq 2000 2016-11-08T22:48:37.901452+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYpGj03696ZqxyXxbxffY1 ENCSR573WYW https://www.encodeproject.org/experiments/ENCSR573WYW transcription factor EP300-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF793GQM https://www.encodeproject.org/files/ENCFF793GQM/@@download/ENCFF793GQM.bam ENCFF752AIU https://www.encodeproject.org/files/ENCFF752AIU/@@download/ENCFF752AIU.bam 92.2 M 0 81.3 M 0.881 PE 76 76 native 32.6 M 0.0 M 31.0 M 0.672 0.95 0.95 19.85 120 1.06 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/7a4c4640-1c1a-4494-8693-2932a3acead1/@@download/cross_correlation_plot/ENCFF577YLDENCFF414MWJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB889CDA richard-myers:SL161329 "ENCFF414MWJ,ENCFF577YLD" HiSeq 2000 2016-11-08T22:48:01.609067+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYqp003692k0X1Jb9xFQvP ENCSR684NJD https://www.encodeproject.org/experiments/ENCSR684NJD transcription factor EP300-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF997UGV https://www.encodeproject.org/files/ENCFF997UGV/@@download/ENCFF997UGV.bam ENCFF037XHJ https://www.encodeproject.org/files/ENCFF037XHJ/@@download/ENCFF037XHJ.bam 82.3 M 0 72.1 M 0.876 PE 76 76 native 28.3 M 0.0 M 26.6 M 0.646 0.94 0.94 16.52 145 1.12 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/7db84337-068e-4e2b-94bd-96a331a00e78/@@download/cross_correlation_plot/ENCFF950IWAENCFF071FDH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB929JHE richard-myers:SL161332 "ENCFF071FDH,ENCFF950IWA" HiSeq 2000 2016-11-08T22:46:58.314644+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYpq803697pV4kg5bgvXX1 ENCSR033FDW https://www.encodeproject.org/experiments/ENCSR033FDW "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF580KMP https://www.encodeproject.org/files/ENCFF580KMP/@@download/ENCFF580KMP.bam ENCFF168QCE https://www.encodeproject.org/files/ENCFF168QCE/@@download/ENCFF168QCE.bam 74.8 M 0 60.3 M 0.806 PE 76 76 native 24.3 M 0.0 M 23.7 M 0.633 0.97 0.97 35.64 110 1.98 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/5b0345a2-bacb-49ef-b31f-ad82eda0093e/@@download/cross_correlation_plot/ENCFF624PFMENCFF592ZFR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB428WNL richard-myers:SL161327 "ENCFF624PFM,ENCFF592ZFR" HiSeq 2000 2016-11-08T22:46:06.330881+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYvqQ036949JVzZVbpZkXY ENCSR714JRB https://www.encodeproject.org/experiments/ENCSR714JRB "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF765ZZI https://www.encodeproject.org/files/ENCFF765ZZI/@@download/ENCFF765ZZI.bam ENCFF526TYR https://www.encodeproject.org/files/ENCFF526TYR/@@download/ENCFF526TYR.bam 90.8 M 0 72.5 M 0.798 PE 76 76 native 28.1 M 0.0 M 27.3 M 0.600 0.97 0.97 33.49 90 1.20 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/24ae602b-4e52-4e5f-95ba-4c2259c6e885/@@download/cross_correlation_plot/ENCFF918QWXENCFF471FTR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB363MBK richard-myers:SL161328 "ENCFF918QWX,ENCFF471FTR" HiSeq 2000 2016-11-08T22:44:27.734503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYx9Q036962J3vkxqKZzjz ENCSR823FFR https://www.encodeproject.org/experiments/ENCSR823FFR "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human stomach tissue 1 richard-myers ENCODE3 GRCh38 ENCFF727MFT https://www.encodeproject.org/files/ENCFF727MFT/@@download/ENCFF727MFT.bam ENCFF883XSF https://www.encodeproject.org/files/ENCFF883XSF/@@download/ENCFF883XSF.bam 69.4 M 0 54.5 M 0.785 PE 76 76 native 21.6 M 0.0 M 21.0 M 0.604 0.97 0.97 36.74 95 1.76 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ba142f3-02fb-4368-b03c-31b9eab03ad1/@@download/cross_correlation_plot/ENCFF086PXDENCFF488ULE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB067EKV richard-myers:SL161334 "ENCFF086PXD,ENCFF488ULE" HiSeq 2000 2016-11-08T22:40:58.483871+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYy100369F27BX7Gp099jx ENCSR009SHE https://www.encodeproject.org/experiments/ENCSR009SHE control Control-human subcutaneous adipose tissue tissue 1 richard-myers ENCODE3 GRCh38 ENCFF448GDG https://www.encodeproject.org/files/ENCFF448GDG/@@download/ENCFF448GDG.bam ENCFF269VXF https://www.encodeproject.org/files/ENCFF269VXF/@@download/ENCFF269VXF.bam 130.2 M 0 108.3 M 0.831 PE 76 76 native 42.2 M 0.0 M 40.0 M 0.614 0.95 0.95 19.62 340 1.00 0.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c3647de-fb47-467f-a4a8-aa70d60d4909/@@download/cross_correlation_plot/ENCFF911DDVENCFF770NPT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB507ERK richard-myers:SL161316 "ENCFF770NPT,ENCFF911DDV" HiSeq 2000 2016-11-08T22:50:35.131122+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYj30036907XyKjbqJg8JK ENCSR281NCY https://www.encodeproject.org/experiments/ENCSR281NCY control Control-human subcutaneous adipose tissue tissue 1 richard-myers ENCODE3 GRCh38 ENCFF918TAF https://www.encodeproject.org/files/ENCFF918TAF/@@download/ENCFF918TAF.bam ENCFF294PCB https://www.encodeproject.org/files/ENCFF294PCB/@@download/ENCFF294PCB.bam 144.0 M 0 120.4 M 0.837 PE 76 76 native 46.9 M 0.0 M 46.1 M 0.640 0.98 0.98 59.03 260 1.01 0.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/3bea36a3-fc04-4bc1-a8c4-932e07fbaf31/@@download/cross_correlation_plot/ENCFF465LHGENCFF631QEA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB870THR richard-myers:SL161323 "ENCFF465LHG,ENCFF631QEA" HiSeq 2000 2016-11-08T22:52:08.755498+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYgj8036943vz6fkqFkzJF ENCSR622ZDY https://www.encodeproject.org/experiments/ENCSR622ZDY control Control-human subcutaneous adipose tissue tissue 1 richard-myers ENCODE3 GRCh38 ENCFF911MRC https://www.encodeproject.org/files/ENCFF911MRC/@@download/ENCFF911MRC.bam ENCFF871XUD https://www.encodeproject.org/files/ENCFF871XUD/@@download/ENCFF871XUD.bam 135.7 M 0 115.0 M 0.848 PE 76 76 native 45.1 M 0.0 M 44.1 M 0.650 0.98 0.98 46.09 90 1.06 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/57f185ad-fd10-41e7-860f-c25acde89d40/@@download/cross_correlation_plot/ENCFF285LRTENCFF568XFG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB602RJA richard-myers:SL161315 "ENCFF285LRT,ENCFF568XFG" HiSeq 2000 2016-11-08T22:53:17.448138+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYg1j0369Bv1ZzP1bXqQ8B ENCSR956TLA https://www.encodeproject.org/experiments/ENCSR956TLA control Control-human subcutaneous adipose tissue tissue 1 richard-myers ENCODE3 GRCh38 ENCFF793QZP https://www.encodeproject.org/files/ENCFF793QZP/@@download/ENCFF793QZP.bam ENCFF326QJB https://www.encodeproject.org/files/ENCFF326QJB/@@download/ENCFF326QJB.bam 102.5 M 0 85.9 M 0.838 PE 76 76 native 34.5 M 0.0 M 32.8 M 0.639 0.95 0.95 20.54 95 1.06 1.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8d2d4a7-c096-4114-98dc-bf53936c2baa/@@download/cross_correlation_plot/ENCFF215CIJENCFF559JAA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB457QWU richard-myers:SL161314 "ENCFF559JAA,ENCFF215CIJ" HiSeq 2000 2016-12-06T16:19:02.788930+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F133F1Q036933vY84Bf1Kb0j ENCSR147VKD https://www.encodeproject.org/experiments/ENCSR147VKD transcription factor EP300-human subcutaneous adipose tissue tissue 1 richard-myers ENCODE3 GRCh38 ENCFF369OGH https://www.encodeproject.org/files/ENCFF369OGH/@@download/ENCFF369OGH.bam ENCFF972MFX https://www.encodeproject.org/files/ENCFF972MFX/@@download/ENCFF972MFX.bam 80.0 M 0 66.2 M 0.827 PE 76 76 native 25.7 M 0.0 M 25.0 M 0.624 0.97 0.97 32.98 95 1.11 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a55d0a1-c2f5-46a0-9535-1d66c46d62b1/@@download/cross_correlation_plot/ENCFF258VLMENCFF836VHY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB189ZJZ richard-myers:SL161326 "ENCFF836VHY,ENCFF258VLM" HiSeq 2000 2016-11-08T22:46:41.796182+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYqPQ0369JzJYQX59X9ypX ENCSR176BAH https://www.encodeproject.org/experiments/ENCSR176BAH transcription factor EP300-human subcutaneous adipose tissue tissue 1 richard-myers ENCODE3 GRCh38 ENCFF753CCI https://www.encodeproject.org/files/ENCFF753CCI/@@download/ENCFF753CCI.bam ENCFF213HXD https://www.encodeproject.org/files/ENCFF213HXD/@@download/ENCFF213HXD.bam 126.4 M 0 115.2 M 0.911 PE 76 76 native 45.7 M 0.0 M 44.8 M 0.710 0.98 0.98 55.64 120 1.07 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/cfc2fe08-58a4-4885-8b8f-729a21df8baa/@@download/cross_correlation_plot/ENCFF408TVUENCFF834WKY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB805PVL richard-myers:SL161325 "ENCFF408TVU,ENCFF834WKY" HiSeq 2000 2016-11-08T22:50:38.222808+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYvYj03696ZqxyXxbxffZx ENCSR980OPB https://www.encodeproject.org/experiments/ENCSR980OPB transcription factor EP300-human subcutaneous adipose tissue tissue 1 richard-myers ENCODE3 GRCh38 ENCFF831UVV https://www.encodeproject.org/files/ENCFF831UVV/@@download/ENCFF831UVV.bam ENCFF059WXP https://www.encodeproject.org/files/ENCFF059WXP/@@download/ENCFF059WXP.bam 87.8 M 0 70.3 M 0.801 PE 76 76 native 28.1 M 0.0 M 21.6 M 0.492 0.77 0.76 4.03 130 1.06 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/bbf53517-9394-4114-bab1-677dceec8765/@@download/cross_correlation_plot/ENCFF190IBBENCFF856IQE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB697UTD richard-myers:SL161331 "ENCFF856IQE,ENCFF190IBB" HiSeq 2000 2016-11-08T22:47:37.559821+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYv70036983pPGVkbbXK69 ENCSR983SZL https://www.encodeproject.org/experiments/ENCSR983SZL transcription factor EP300-human subcutaneous adipose tissue tissue 1 richard-myers ENCODE3 GRCh38 ENCFF210SBD https://www.encodeproject.org/files/ENCFF210SBD/@@download/ENCFF210SBD.bam ENCFF653MRG https://www.encodeproject.org/files/ENCFF653MRG/@@download/ENCFF653MRG.bam 83.4 M 0 69.3 M 0.831 PE 76 76 native 27.9 M 0.0 M 24.3 M 0.582 0.87 0.87 7.51 145 1.06 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/0edf8416-d12e-416d-b574-12c17b6f6368/@@download/cross_correlation_plot/ENCFF339LBUENCFF349ISG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB059XKK richard-myers:SL161335 "ENCFF349ISG,ENCFF339LBU" HiSeq 2000 2016-11-08T22:46:57.093948+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYv0803696ZqxyXxbxffZ0 ENCSR011LTA https://www.encodeproject.org/experiments/ENCSR011LTA control Control-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF572OLC https://www.encodeproject.org/files/ENCFF572OLC/@@download/ENCFF572OLC.bam ENCFF614QJD https://www.encodeproject.org/files/ENCFF614QJD/@@download/ENCFF614QJD.bam 221.5 M 0 171.0 M 0.772 PE 76 76 native 65.2 M 0.0 M 63.7 M 0.575 0.98 0.98 42.59 260 1.01 0.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/70f68f67-66f9-471a-8abd-3dbde6d925ca/@@download/cross_correlation_plot/ENCFF949BQTENCFF217QQZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB129WZC richard-myers:SL161359 "ENCFF949BQT,ENCFF217QQZ" HiSeq 2000 2017-02-02T11:09:35.984573+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293VX80369BpyVQJ710fxB9 ENCSR106JXD https://www.encodeproject.org/experiments/ENCSR106JXD control Control-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF284VSB https://www.encodeproject.org/files/ENCFF284VSB/@@download/ENCFF284VSB.bam ENCFF675DII https://www.encodeproject.org/files/ENCFF675DII/@@download/ENCFF675DII.bam 169.7 M 0 140.5 M 0.828 PE 76 76 native 55.2 M 0.0 M 54.2 M 0.639 0.98 0.98 59.99 285 1.01 0.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/ffd02344-0246-4eb6-bed3-0d853dec13d1/@@download/cross_correlation_plot/ENCFF353DLWENCFF214RDT.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB824HXL richard-myers:SL161360 "ENCFF353DLW,ENCFF214RDT" HiSeq 2000 2017-02-02T07:41:43.627582+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2936gj03695y6gFJ6jy81b1 ENCSR213GWR https://www.encodeproject.org/experiments/ENCSR213GWR control Control-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF549SBD https://www.encodeproject.org/files/ENCFF549SBD/@@download/ENCFF549SBD.bam ENCFF326WEF https://www.encodeproject.org/files/ENCFF326WEF/@@download/ENCFF326WEF.bam 159.2 M 0 122.2 M 0.767 PE 76 76 native 46.6 M 0.0 M 45.7 M 0.574 0.98 0.98 51.71 280 1.01 0.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/e2fedac4-42ac-4091-8dba-edd9102ae1bb/@@download/cross_correlation_plot/ENCFF953GZPENCFF067POA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB809XDJ richard-myers:SL161357 "ENCFF953GZP,ENCFF067POA" HiSeq 2000 2017-02-02T06:35:24.487245+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2935zQ03695y6gFJ6jy81Z9 ENCSR225UUX https://www.encodeproject.org/experiments/ENCSR225UUX control Control-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF451SMC https://www.encodeproject.org/files/ENCFF451SMC/@@download/ENCFF451SMC.bam ENCFF332OIY https://www.encodeproject.org/files/ENCFF332OIY/@@download/ENCFF332OIY.bam 123.1 M 0 102.4 M 0.832 PE 76 76 native 39.6 M 0.0 M 39.2 M 0.637 0.99 0.99 105.31 270 1.00 0.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/a9944e19-d857-4382-919b-a0a3a7e30a71/@@download/cross_correlation_plot/ENCFF916VDSENCFF567TLA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB682HSP richard-myers:SL161374 "ENCFF916VDS,ENCFF567TLA" HiSeq 2000 2017-02-02T04:13:25.510068+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292kgj03695y6gFJ6jy81J3 ENCSR467CRM https://www.encodeproject.org/experiments/ENCSR467CRM control Control-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF511XEA https://www.encodeproject.org/files/ENCFF511XEA/@@download/ENCFF511XEA.bam ENCFF669LRK https://www.encodeproject.org/files/ENCFF669LRK/@@download/ENCFF669LRK.bam 86.8 M 0 74.1 M 0.854 PE 76 76 native 28.9 M 0.0 M 28.5 M 0.658 0.99 0.99 83.39 320 1.00 0.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/b445ccb4-bc6d-4d72-b723-97fa8a433efa/@@download/cross_correlation_plot/ENCFF502WHIENCFF527OHP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB422OQD richard-myers:SL161375 "ENCFF502WHI,ENCFF527OHP" HiSeq 2000 2017-02-02T01:58:25.949146+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292vGQ036951p1PJ64F8fbK ENCSR915TAF https://www.encodeproject.org/experiments/ENCSR915TAF control Control-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF046CQF https://www.encodeproject.org/files/ENCFF046CQF/@@download/ENCFF046CQF.bam ENCFF424BTN https://www.encodeproject.org/files/ENCFF424BTN/@@download/ENCFF424BTN.bam 72.5 M 0 59.7 M 0.823 PE 76 76 native 23.2 M 0.0 M 22.9 M 0.633 0.99 0.99 95.39 305 1.01 0.05 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c954420-6d77-4b4f-b5c4-9b403b8394be/@@download/cross_correlation_plot/ENCFF534FKHENCFF573BIK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB752TFG richard-myers:SL161376 "ENCFF534FKH,ENCFF573BIK" HiSeq 2000 2017-02-02T01:04:59.732909+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Pz803695y6gFJ6jy8163 ENCSR972HZL https://www.encodeproject.org/experiments/ENCSR972HZL control Control-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF711ZWZ https://www.encodeproject.org/files/ENCFF711ZWZ/@@download/ENCFF711ZWZ.bam ENCFF595RCT https://www.encodeproject.org/files/ENCFF595RCT/@@download/ENCFF595RCT.bam 84.4 M 0 71.5 M 0.847 PE 76 76 native 28.1 M 0.0 M 27.9 M 0.660 0.99 0.99 98.95 290 1.00 0.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/d59a0863-0d23-45c8-96b3-bc09243549c0/@@download/cross_correlation_plot/ENCFF843ANSENCFF804NZY.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB559OUW richard-myers:SL161377 "ENCFF843ANS,ENCFF804NZY" HiSeq 2000 2017-02-02T01:34:01.275225+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292VG803693q2BXJ6Zx9XK7 ENCSR270TYZ https://www.encodeproject.org/experiments/ENCSR270TYZ transcription factor EP300-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF265RTL https://www.encodeproject.org/files/ENCFF265RTL/@@download/ENCFF265RTL.bam ENCFF254JUN https://www.encodeproject.org/files/ENCFF254JUN/@@download/ENCFF254JUN.bam 105.8 M 0 90.2 M 0.852 PE 76 76 native 36.7 M 0.0 M 31.7 M 0.599 0.86 0.86 6.93 155 1.14 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/47102fae-ecc5-4fd1-b2da-4b120d67040f/@@download/cross_correlation_plot/ENCFF355QDRENCFF532FBK.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB571XIR richard-myers:SL161351 "ENCFF532FBK,ENCFF355QDR" HiSeq 2000 2017-02-02T02:28:46.503857+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2932PQ0369BvG3VJ5qF228F ENCSR300KUL https://www.encodeproject.org/experiments/ENCSR300KUL transcription factor EP300-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF024VTM https://www.encodeproject.org/files/ENCFF024VTM/@@download/ENCFF024VTM.bam ENCFF488XHE https://www.encodeproject.org/files/ENCFF488XHE/@@download/ENCFF488XHE.bam 40.2 M 0 37.6 M 0.936 PE 76 76 native 15.3 M 0.0 M 13.8 M 0.687 0.90 0.90 9.99 170 1.09 3.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/cefeb88a-2257-4fc7-90b8-8cc79e7008fd/@@download/cross_correlation_plot/ENCFF952JIYENCFF296JWD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB435LGF richard-myers:SL161369 "ENCFF296JWD,ENCFF952JIY" HiSeq 2000 2017-02-02T01:03:00.019882+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292zb803696Kgy2J6PFqv7J ENCSR773QRB https://www.encodeproject.org/experiments/ENCSR773QRB transcription factor EP300-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF481BPS https://www.encodeproject.org/files/ENCFF481BPS/@@download/ENCFF481BPS.bam ENCFF924ETU https://www.encodeproject.org/files/ENCFF924ETU/@@download/ENCFF924ETU.bam 106.6 M 0 97.2 M 0.912 PE 76 76 native 39.2 M 0.0 M 36.0 M 0.674 0.92 0.92 11.95 120 1.06 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/b24173cd-8506-46fe-930a-3cf1beabf8f7/@@download/cross_correlation_plot/ENCFF882UZCENCFF706YJI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB122NJW richard-myers:SL161367 "ENCFF882UZC,ENCFF706YJI" HiSeq 2000 2017-02-02T04:38:17.899749+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293QbQ0369BpyVQJ710fx9K ENCSR928LDG https://www.encodeproject.org/experiments/ENCSR928LDG transcription factor EP300-human suprapubic skin tissue 1 richard-myers ENCODE3 GRCh38 ENCFF933WJH https://www.encodeproject.org/files/ENCFF933WJH/@@download/ENCFF933WJH.bam ENCFF531DYO https://www.encodeproject.org/files/ENCFF531DYO/@@download/ENCFF531DYO.bam 149.7 M 0 131.3 M 0.877 PE 76 76 native 52.8 M 0.0 M 51.1 M 0.683 0.97 0.97 30.72 95 1.06 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c5e8148-dd5d-4ba1-9b39-2d0d83c66723/@@download/cross_correlation_plot/ENCFF920QMAENCFF513RVZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB468LCQ richard-myers:SL161348 "ENCFF920QMA,ENCFF513RVZ" HiSeq 2000 2017-02-02T07:13:38.910033+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2939P003698K796J5yq8QkY ENCSR000BMP https://www.encodeproject.org/experiments/ENCSR000BMP control Control-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF503VFG https://www.encodeproject.org/files/ENCFF503VFG/@@download/ENCFF503VFG.bam ENCFF554CET https://www.encodeproject.org/files/ENCFF554CET/@@download/ENCFF554CET.bam 48.4 M 0 36.5 M 0.755 SE 36 36 native 0.0 M 26.4 M 26.1 M 0.540 0.99 0.99 200.83 110 1.01 0.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/d5f96bb0-750e-48dd-bd72-cde9d5b2d25f/@@download/cross_correlation_plot/ENCFF000RJV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JBT richard-myers:SL1881 ENCFF000RJV Illumina Genome Analyzer IIx 2016-10-26T17:44:22.292769+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820Jj0369F7fQjy59kFgkg ENCSR000BVX https://www.encodeproject.org/experiments/ENCSR000BVX control Control-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF719KPR https://www.encodeproject.org/files/ENCFF719KPR/@@download/ENCFF719KPR.bam ENCFF983NIA https://www.encodeproject.org/files/ENCFF983NIA/@@download/ENCFF983NIA.bam 53.4 M 0 50.9 M 0.953 SE 50 50 native 0.0 M 40.9 M 40.0 M 0.749 0.99 0.99 108.48 70 1.02 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/5fd20833-3ce4-4f25-81c6-84e2fc26444e/@@download/cross_correlation_plot/ENCFF000RJY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JVT richard-myers:SL13294 ENCFF000RJY HiSeq 2000 2016-11-30T18:19:55.807007+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0yyGf80369PZj37jVj8p3q9 ENCSR000BNO https://www.encodeproject.org/experiments/ENCSR000BNO "transcription factor,RNA binding protein" CTCF-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF194DLC https://www.encodeproject.org/files/ENCFF194DLC/@@download/ENCFF194DLC.bam ENCFF519TWC https://www.encodeproject.org/files/ENCFF519TWC/@@download/ENCFF519TWC.bam 31.6 M 0 28.7 M 0.911 SE 36 36 native 0.0 M 21.6 M 19.3 M 0.613 0.90 0.90 9.51 145 1.12 2.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/16b05752-f5a5-4ea7-bd87-daec82413432/@@download/cross_correlation_plot/ENCFF000RHD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXI richard-myers:SL2634 ENCFF000RHD Illumina Genome Analyzer IIx 2016-12-11T05:01:22.998320+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1668qj0369KbxV61z4GFvy8 ENCSR000BNO https://www.encodeproject.org/experiments/ENCSR000BNO "transcription factor,RNA binding protein" CTCF-human T47D immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF615LHE https://www.encodeproject.org/files/ENCFF615LHE/@@download/ENCFF615LHE.bam ENCFF619FIE https://www.encodeproject.org/files/ENCFF619FIE/@@download/ENCFF619FIE.bam 37.6 M 0 29.8 M 0.793 SE 36 36 native 0.0 M 20.8 M 16.1 M 0.428 0.78 0.77 4.24 110 1.52 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/3776f65f-05fb-4ce7-b92e-abcde8cfe299/@@download/cross_correlation_plot/ENCFF000RHF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JXH richard-myers:SL3014 ENCFF000RHF Illumina Genome Analyzer IIx 2016-12-11T04:59:25.229776+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16691Q0369BJyPz9fb9qYX0 ENCSR000BLM https://www.encodeproject.org/experiments/ENCSR000BLM transcription factor EP300-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF704RYY https://www.encodeproject.org/files/ENCFF704RYY/@@download/ENCFF704RYY.bam ENCFF610NXG https://www.encodeproject.org/files/ENCFF610NXG/@@download/ENCFF610NXG.bam 21.2 M 0 19.6 M 0.925 SE 36 36 native 0.0 M 14.9 M 14.3 M 0.674 0.96 0.96 26.03 135 1.20 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/932b4692-a05e-48a2-92af-c683fa7f37d2/@@download/cross_correlation_plot/ENCFF000RJJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAE richard-myers:SL2633 ENCFF000RJJ Illumina Genome Analyzer IIx 2016-12-10T22:23:17.601033+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163KY8036904pZZ8v3bkg4b ENCSR000BLM https://www.encodeproject.org/experiments/ENCSR000BLM transcription factor EP300-human T47D immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF266XHV https://www.encodeproject.org/files/ENCFF266XHV/@@download/ENCFF266XHV.bam ENCFF313HYO https://www.encodeproject.org/files/ENCFF313HYO/@@download/ENCFF313HYO.bam 29.5 M 0 25.4 M 0.861 SE 36 36 native 0.0 M 18.1 M 16.7 M 0.567 0.92 0.92 13.15 110 1.12 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7c2371f-90e5-43a6-8152-b2a1c837343c/@@download/cross_correlation_plot/ENCFF000RJL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KAD richard-myers:SL3015 ENCFF000RJL Illumina Genome Analyzer IIx 2016-12-10T23:14:07.493460+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Kj00369BJyPz9fb9qXyF ENCSR000BJS https://www.encodeproject.org/experiments/ENCSR000BJS transcription factor ESR1-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF446TBL https://www.encodeproject.org/files/ENCFF446TBL/@@download/ENCFF446TBL.bam ENCFF856GMW https://www.encodeproject.org/files/ENCFF856GMW/@@download/ENCFF856GMW.bam 41.0 M 0 32.8 M 0.800 SE 36 36 native 0.0 M 24.3 M 20.5 M 0.500 0.84 0.85 6.50 120 1.29 1.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/7765813b-718d-44b4-9859-942d8472ba80/@@download/cross_correlation_plot/ENCFF000RIK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYN richard-myers:SL1218 ENCFF000RIK Illumina Genome Analyzer IIx 2016-12-11T03:33:37.428317+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Q1803692pJ09J76g5g5p ENCSR000BJS https://www.encodeproject.org/experiments/ENCSR000BJS transcription factor ESR1-human T47D immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF740NIN https://www.encodeproject.org/files/ENCFF740NIN/@@download/ENCFF740NIN.bam ENCFF886WCM https://www.encodeproject.org/files/ENCFF886WCM/@@download/ENCFF886WCM.bam 32.3 M 0 26.3 M 0.814 SE 36 36 native 0.0 M 19.3 M 16.2 M 0.501 0.84 0.84 5.99 120 1.20 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/35f3ec74-9758-4b64-ab45-0048ed16d227/@@download/cross_correlation_plot/ENCFF000RIH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYO richard-myers:SL1492 ENCFF000RIH Illumina Genome Analyzer IIx 2016-12-11T03:20:55.337591+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Q6003696Kk1YFv8qy54y ENCSR000BKN https://www.encodeproject.org/experiments/ENCSR000BKN transcription factor ESR1-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF757SKM https://www.encodeproject.org/files/ENCFF757SKM/@@download/ENCFF757SKM.bam ENCFF316WFO https://www.encodeproject.org/files/ENCFF316WFO/@@download/ENCFF316WFO.bam 25.0 M 0 16.6 M 0.663 SE 36 36 native 0.0 M 11.9 M 10.8 M 0.431 0.91 0.92 13.42 125 1.69 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8c18f91-3a15-4fa8-89f3-2d23ace7fce4/@@download/cross_correlation_plot/ENCFF000RIA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTG richard-myers:SL1217 ENCFF000RIA Illumina Genome Analyzer IIx 2016-12-11T04:59:28.883044+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166KBj03692BKq0F3V3jFj6 ENCSR000BKN https://www.encodeproject.org/experiments/ENCSR000BKN transcription factor ESR1-human T47D immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF422VSE https://www.encodeproject.org/files/ENCFF422VSE/@@download/ENCFF422VSE.bam ENCFF998SNK https://www.encodeproject.org/files/ENCFF998SNK/@@download/ENCFF998SNK.bam 29.1 M 0 23.5 M 0.807 SE 36 36 native 0.0 M 17.3 M 15.4 M 0.528 0.89 0.90 9.73 115 1.36 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/5e8036e2-9638-4d4b-ba62-a9d2ca4b4fcb/@@download/cross_correlation_plot/ENCFF000RHZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JTH richard-myers:SL1491 ENCFF000RHZ Illumina Genome Analyzer IIx 2016-12-11T05:04:23.826908+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166KQ00369KbxV61z4GFx01 ENCSR000BLL https://www.encodeproject.org/experiments/ENCSR000BLL transcription factor ESR1-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF406KPS https://www.encodeproject.org/files/ENCFF406KPS/@@download/ENCFF406KPS.bam ENCFF920NFF https://www.encodeproject.org/files/ENCFF920NFF/@@download/ENCFF920NFF.bam 20.9 M 0 16.6 M 0.791 SE 36 36 native 0.0 M 12.1 M 11.5 M 0.547 0.95 0.95 20.15 110 1.10 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ae6fc04-6905-47f7-ac7b-1988debb2076/@@download/cross_correlation_plot/ENCFF000RHW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JYY richard-myers:SL1216 ENCFF000RHW Illumina Genome Analyzer IIx 2016-12-10T19:15:06.095689+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162VgQ03693J2XX63yZ7Bpb ENCSR000BLL https://www.encodeproject.org/experiments/ENCSR000BLL transcription factor ESR1-human T47D immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF414YAT https://www.encodeproject.org/files/ENCFF414YAT/@@download/ENCFF414YAT.bam ENCFF072PMA https://www.encodeproject.org/files/ENCFF072PMA/@@download/ENCFF072PMA.bam 20.8 M 0 17.1 M 0.821 SE 36 36 native 0.0 M 12.5 M 11.3 M 0.546 0.91 0.91 10.46 100 1.06 2.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/1cb6b24c-3774-41dc-a26e-126e1d5d6b7c/@@download/cross_correlation_plot/ENCFF000RHV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZA richard-myers:SL1490 ENCFF000RHV Illumina Genome Analyzer IIx 2016-12-10T19:47:21.432579+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162Vvj0369K8k6p8qBf9pqF ENCSR000BQD https://www.encodeproject.org/experiments/ENCSR000BQD transcription factor ESR1-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF784CCE https://www.encodeproject.org/files/ENCFF784CCE/@@download/ENCFF784CCE.bam ENCFF294MUM https://www.encodeproject.org/files/ENCFF294MUM/@@download/ENCFF294MUM.bam 32.0 M 0 26.4 M 0.822 SE 36 36 native 0.0 M 19.3 M 16.4 M 0.512 0.85 0.85 6.29 105 1.13 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/bb4907ec-7f9d-4537-b966-6fc321fdd248/@@download/cross_correlation_plot/ENCFF000RHM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCD richard-myers:SL1493 ENCFF000RHM Illumina Genome Analyzer IIx 2016-12-10T21:04:54.671108+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1633x003692BKq0F3V3jFX3 ENCSR000BQD https://www.encodeproject.org/experiments/ENCSR000BQD transcription factor ESR1-human T47D immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF231RDV https://www.encodeproject.org/files/ENCFF231RDV/@@download/ENCFF231RDV.bam ENCFF825VBO https://www.encodeproject.org/files/ENCFF825VBO/@@download/ENCFF825VBO.bam 38.8 M 0 35.5 M 0.915 SE 36 36 native 0.0 M 26.0 M 23.0 M 0.594 0.88 0.88 8.40 125 1.08 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/25d299ea-65d8-4bd1-9633-cf98f5016476/@@download/cross_correlation_plot/ENCFF000RHO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KCC richard-myers:SL1877 ENCFF000RHO Illumina Genome Analyzer IIx 2016-12-10T21:22:03.491964+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16341j03699Z3Y8493qbp68 ENCSR000BKY https://www.encodeproject.org/experiments/ENCSR000BKY transcription factor FOXA1-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF318GHN https://www.encodeproject.org/files/ENCFF318GHN/@@download/ENCFF318GHN.bam ENCFF637HYH https://www.encodeproject.org/files/ENCFF637HYH/@@download/ENCFF637HYH.bam 17.2 M 0 16.4 M 0.954 SE 36 36 native 0.0 M 13.0 M 11.4 M 0.661 0.87 0.88 8.16 125 1.83 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/ad274154-6344-4114-a80d-775fa2bcb2a5/@@download/cross_correlation_plot/ENCFF000RIL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZO richard-myers:SL1878 ENCFF000RIL Illumina Genome Analyzer IIx 2016-12-10T21:02:27.947589+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F16358Q0369GF0YB1zjPf6PG ENCSR000BKY https://www.encodeproject.org/experiments/ENCSR000BKY transcription factor FOXA1-human T47D immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF012QZM https://www.encodeproject.org/files/ENCFF012QZM/@@download/ENCFF012QZM.bam ENCFF899RIL https://www.encodeproject.org/files/ENCFF899RIL/@@download/ENCFF899RIL.bam 26.7 M 0 24.2 M 0.905 SE 36 36 native 0.0 M 18.5 M 17.0 M 0.637 0.92 0.94 18.25 100 1.94 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/539471f2-5860-48c8-8a64-f41cb7c7aca1/@@download/cross_correlation_plot/ENCFF000RIR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JZN richard-myers:SL2081 ENCFF000RIR Illumina Genome Analyzer IIx 2016-12-10T21:17:07.769045+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1635J803695zJkyP3F892J9 ENCSR000BMX https://www.encodeproject.org/experiments/ENCSR000BMX transcription factor GATA3-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF600KCK https://www.encodeproject.org/files/ENCFF600KCK/@@download/ENCFF600KCK.bam ENCFF478IDH https://www.encodeproject.org/files/ENCFF478IDH/@@download/ENCFF478IDH.bam 30.6 M 0 27.9 M 0.911 SE 36 36 native 0.0 M 21.5 M 20.3 M 0.664 0.95 0.95 21.43 115 1.26 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/b203e1d2-aae0-4b01-9842-023e053a61bf/@@download/cross_correlation_plot/ENCFF000RIX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBT richard-myers:SL2636 ENCFF000RIX Illumina Genome Analyzer IIx 2016-12-11T04:32:37.888687+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165b2j03695yqvv8q311QQv ENCSR000BMX https://www.encodeproject.org/experiments/ENCSR000BMX transcription factor GATA3-human T47D immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF458VET https://www.encodeproject.org/files/ENCFF458VET/@@download/ENCFF458VET.bam ENCFF676KGX https://www.encodeproject.org/files/ENCFF676KGX/@@download/ENCFF676KGX.bam 33.6 M 0 30.4 M 0.906 SE 36 36 native 0.0 M 23.1 M 21.3 M 0.635 0.92 0.93 15.73 120 1.57 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c0868b3-fd15-467d-8afd-4fc80024cd33/@@download/cross_correlation_plot/ENCFF000RIY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559KBS richard-myers:SL3013 ENCFF000RIY Illumina Genome Analyzer IIx 2016-12-11T04:34:32.903263+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165b7j0369PJ8BP63qf1Fkb ENCSR000BVO https://www.encodeproject.org/experiments/ENCSR000BVO transcription factor JUND-human T47D immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF794NQC https://www.encodeproject.org/files/ENCFF794NQC/@@download/ENCFF794NQC.bam ENCFF151THN https://www.encodeproject.org/files/ENCFF151THN/@@download/ENCFF151THN.bam 22.2 M 0 21.2 M 0.955 SE 50 50 native 0.0 M 17.7 M 17.1 M 0.773 0.97 0.97 36.77 120 1.05 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/a924fee4-efe1-4247-b87c-32cf831bc974/@@download/cross_correlation_plot/ENCFF000RJG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JWE richard-myers:SL11656 ENCFF000RJG HiSeq 2000 2016-11-30T18:11:29.995037+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4X8j0369KGzVG4GJz9Fp5 ENCSR000BVO https://www.encodeproject.org/experiments/ENCSR000BVO transcription factor JUND-human T47D immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF511JPZ https://www.encodeproject.org/files/ENCFF511JPZ/@@download/ENCFF511JPZ.bam ENCFF421GCC https://www.encodeproject.org/files/ENCFF421GCC/@@download/ENCFF421GCC.bam 34.9 M 0 33.8 M 0.968 SE 50 50 native 0.0 M 27.9 M 26.8 M 0.769 0.97 0.97 31.31 105 1.04 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/fa8d182d-c7f0-4c8a-8833-a6051e64a6da/@@download/cross_correlation_plot/ENCFF000RJM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCI richard-myers:SL11657 ENCFF000RJM HiSeq 2000 2016-11-30T18:11:55.207075+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0y4XF00369BZFBbVv6KF50B ENCSR666SXC https://www.encodeproject.org/experiments/ENCSR666SXC control Control-human testis tissue 1 richard-myers ENCODE3 GRCh38 ENCFF813RGH https://www.encodeproject.org/files/ENCFF813RGH/@@download/ENCFF813RGH.bam ENCFF589QQJ https://www.encodeproject.org/files/ENCFF589QQJ/@@download/ENCFF589QQJ.bam 112.8 M 0 95.1 M 0.843 PE 76 76 native 37.8 M 0.0 M 36.7 M 0.651 0.98 0.98 40.80 270 1.01 0.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/4d679a97-8611-4d07-b241-6d55290f3373/@@download/cross_correlation_plot/ENCFF098YMIENCFF107FJA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB037GMV richard-myers:SL161563 "ENCFF107FJA,ENCFF098YMI" HiSeq 2000 2017-02-02T03:05:04.967960+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292XFj036951p1PJ64F8fKf ENCSR046INL https://www.encodeproject.org/experiments/ENCSR046INL transcription factor EP300-human testis tissue 1 richard-myers ENCODE3 GRCh38 ENCFF786STT https://www.encodeproject.org/files/ENCFF786STT/@@download/ENCFF786STT.bam ENCFF086PII https://www.encodeproject.org/files/ENCFF086PII/@@download/ENCFF086PII.bam 71.1 M 0 65.6 M 0.922 PE 76 76 native 26.2 M 0.0 M 25.6 M 0.720 0.98 0.98 41.24 125 1.08 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ab5fbba-21d3-4110-99a6-fbc39ba11c57/@@download/cross_correlation_plot/ENCFF185SFCENCFF768WER.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB957YZF richard-myers:SL161554 "ENCFF768WER,ENCFF185SFC" HiSeq 2000 2017-02-02T01:05:33.063823+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Vb80369P4VQpFPXJ77XB ENCSR846VRM https://www.encodeproject.org/experiments/ENCSR846VRM control Control-human tibial nerve tissue 1 richard-myers ENCODE3 GRCh38 ENCFF800SVM https://www.encodeproject.org/files/ENCFF800SVM/@@download/ENCFF800SVM.bam ENCFF934MHZ https://www.encodeproject.org/files/ENCFF934MHZ/@@download/ENCFF934MHZ.bam 132.2 M 0 113.1 M 0.856 PE 76 76 native 44.9 M 0.0 M 43.5 M 0.659 0.97 0.97 33.68 320 1.01 0.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d6cb345-0085-414d-834c-7de0b17b2704/@@download/cross_correlation_plot/ENCFF766JFKENCFF826BIL.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB594FEQ richard-myers:SL161561 "ENCFF826BIL,ENCFF766JFK" HiSeq 2000 2017-02-02T04:50:45.887596+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292PBQ0369BpyVQJ710fbZ4 ENCSR889VXP https://www.encodeproject.org/experiments/ENCSR889VXP control Control-human tibial nerve tissue 1 richard-myers ENCODE3 GRCh38 ENCFF842EMA https://www.encodeproject.org/files/ENCFF842EMA/@@download/ENCFF842EMA.bam ENCFF461EUQ https://www.encodeproject.org/files/ENCFF461EUQ/@@download/ENCFF461EUQ.bam 98.3 M 0 82.9 M 0.842 PE 76 76 native 33.1 M 0.0 M 32.0 M 0.650 0.97 0.97 30.79 300 1.01 0.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/0e27f152-ba67-4d29-97fe-448427e9c8c3/@@download/cross_correlation_plot/ENCFF126ZEQENCFF931XXU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB044VRK richard-myers:SL161562 "ENCFF126ZEQ,ENCFF931XXU" HiSeq 2000 2017-02-02T01:52:11.506624+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292FqQ03697G42vFQVBBpk7 ENCSR569SZK https://www.encodeproject.org/experiments/ENCSR569SZK transcription factor EP300-human tibial nerve tissue 1 richard-myers ENCODE3 GRCh38 ENCFF489UTO https://www.encodeproject.org/files/ENCFF489UTO/@@download/ENCFF489UTO.bam ENCFF367CDJ https://www.encodeproject.org/files/ENCFF367CDJ/@@download/ENCFF367CDJ.bam 77.6 M 0 67.9 M 0.875 PE 76 76 native 28.1 M 0.0 M 23.0 M 0.593 0.82 0.82 5.25 155 1.10 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/bfe7be3b-144a-4939-8050-c400d2df0d00/@@download/cross_correlation_plot/ENCFF813LLQENCFF742HCJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB938TZL richard-myers:SL161553 "ENCFF813LLQ,ENCFF742HCJ" HiSeq 2000 2017-02-02T01:23:04.968832+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292g7j03698K796J5yq8QP2 ENCSR580XUK https://www.encodeproject.org/experiments/ENCSR580XUK transcription factor EP300-human tibial nerve tissue 1 richard-myers ENCODE3 GRCh38 ENCFF591PEY https://www.encodeproject.org/files/ENCFF591PEY/@@download/ENCFF591PEY.bam ENCFF478WHQ https://www.encodeproject.org/files/ENCFF478WHQ/@@download/ENCFF478WHQ.bam 80.0 M 0 72.1 M 0.901 PE 76 76 native 30.3 M 0.0 M 28.4 M 0.709 0.94 0.94 15.67 125 2.11 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/def3157d-a5f7-404d-b8d8-bcbf8c27790f/@@download/cross_correlation_plot/ENCFF716BNNENCFF892KYV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB050YTS richard-myers:SL161552 "ENCFF716BNN,ENCFF892KYV" HiSeq 2000 2017-02-02T01:05:57.325923+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Q5Q03692Gpj6FPk3vB3f ENCSR138QGB https://www.encodeproject.org/experiments/ENCSR138QGB control Control-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF240ZFM https://www.encodeproject.org/files/ENCFF240ZFM/@@download/ENCFF240ZFM.bam ENCFF722KBE https://www.encodeproject.org/files/ENCFF722KBE/@@download/ENCFF722KBE.bam 85.3 M 0 70.6 M 0.828 PE 76 76 native 28.1 M 0.0 M 27.5 M 0.646 0.98 0.98 51.98 280 1.01 0.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/48c10f94-f43b-4fa3-bb8c-b193152c2d3a/@@download/cross_correlation_plot/ENCFF090EFTENCFF102SYP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB126PTD richard-myers:SL161294 "ENCFF102SYP,ENCFF090EFT" HiSeq 2000 2016-11-08T22:49:50.246423+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYg78036949JVzZVbpZkVK ENCSR147NJH https://www.encodeproject.org/experiments/ENCSR147NJH control Control-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF660MMX https://www.encodeproject.org/files/ENCFF660MMX/@@download/ENCFF660MMX.bam ENCFF383ZXS https://www.encodeproject.org/files/ENCFF383ZXS/@@download/ENCFF383ZXS.bam 59.7 M 0 45.0 M 0.754 PE 76 76 native 12.0 M 0.0 M 11.8 M 0.396 0.98 0.98 53.22 100 1.18 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/525530b5-c628-4ac6-a348-8dda9b796dee/@@download/cross_correlation_plot/ENCFF853XWNENCFF555QUG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB154GSO richard-myers:SL161300 "ENCFF555QUG,ENCFF853XWN" HiSeq 2000 2016-11-08T22:47:05.903055+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYjJj036962J3vkxqKZxkJ ENCSR170BPY https://www.encodeproject.org/experiments/ENCSR170BPY control Control-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF680OHW https://www.encodeproject.org/files/ENCFF680OHW/@@download/ENCFF680OHW.bam ENCFF484ZUJ https://www.encodeproject.org/files/ENCFF484ZUJ/@@download/ENCFF484ZUJ.bam 116.8 M 0 97.5 M 0.835 PE 76 76 native 39.6 M 0.0 M 38.7 M 0.663 0.98 0.98 46.62 305 1.01 0.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/a35294cd-5546-4cbf-acfa-0cdfaf1e0411/@@download/cross_correlation_plot/ENCFF688VIRENCFF500RYP.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB697NTM richard-myers:SL161297 "ENCFF500RYP,ENCFF688VIR" HiSeq 2000 2016-11-08T22:49:08.532150+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYkG803691z1J9q5qKfvf6 ENCSR293DLP https://www.encodeproject.org/experiments/ENCSR293DLP control Control-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF411SNQ https://www.encodeproject.org/files/ENCFF411SNQ/@@download/ENCFF411SNQ.bam ENCFF189EQQ https://www.encodeproject.org/files/ENCFF189EQQ/@@download/ENCFF189EQQ.bam 114.6 M 0 95.2 M 0.831 PE 76 76 native 38.0 M 0.0 M 37.3 M 0.652 0.99 0.99 68.34 290 1.01 0.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/2ae51343-871b-4893-a217-ef8de40e92b9/@@download/cross_correlation_plot/ENCFF141WOUENCFF939CSH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB111FWP richard-myers:SL161293 "ENCFF141WOU,ENCFF939CSH" HiSeq 2000 2016-11-08T22:48:39.890160+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYjjj0369FqvPFx5q886pj ENCSR602GPF https://www.encodeproject.org/experiments/ENCSR602GPF control Control-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF993NZP https://www.encodeproject.org/files/ENCFF993NZP/@@download/ENCFF993NZP.bam ENCFF223UIA https://www.encodeproject.org/files/ENCFF223UIA/@@download/ENCFF223UIA.bam 115.5 M 0 95.7 M 0.829 PE 76 76 native 38.1 M 0.0 M 37.5 M 0.649 0.98 0.98 64.69 285 1.01 0.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/fd176941-6a37-4656-beb5-99dff9cbfa55/@@download/cross_correlation_plot/ENCFF917RIAENCFF613PQJ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB077BZM richard-myers:SL161298 "ENCFF917RIA,ENCFF613PQJ" HiSeq 2000 2016-11-08T22:48:40.796358+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYkV0036907XyKjbqJg8K1 ENCSR717TBA https://www.encodeproject.org/experiments/ENCSR717TBA control Control-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF171XEH https://www.encodeproject.org/files/ENCFF171XEH/@@download/ENCFF171XEH.bam ENCFF517VWR https://www.encodeproject.org/files/ENCFF517VWR/@@download/ENCFF517VWR.bam 107.7 M 0 87.0 M 0.808 PE 76 76 native 35.0 M 0.0 M 34.2 M 0.635 0.98 0.98 51.50 265 1.01 0.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/e40abdc5-f750-4b27-a654-3efbcdc11595/@@download/cross_correlation_plot/ENCFF092KOUENCFF553BIW.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB499RHQ richard-myers:SL161299 "ENCFF553BIW,ENCFF092KOU" HiSeq 2000 2016-11-08T22:49:46.710477+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYjy003697pP8fGV9f07Gp ENCSR429JTR https://www.encodeproject.org/experiments/ENCSR429JTR transcription factor EP300-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF527RBK https://www.encodeproject.org/files/ENCFF527RBK/@@download/ENCFF527RBK.bam ENCFF329BOB https://www.encodeproject.org/files/ENCFF329BOB/@@download/ENCFF329BOB.bam 54.5 M 0 49.2 M 0.903 PE 76 76 native 20.4 M 0.0 M 19.5 M 0.714 0.95 0.95 21.69 120 1.14 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/01a342a2-10d0-406d-a6cd-3457f22b22b7/@@download/cross_correlation_plot/ENCFF133IBSENCFF846BTF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB091DRX richard-myers:SL161304 "ENCFF133IBS,ENCFF846BTF" HiSeq 2000 2016-11-08T22:45:24.107049+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYq4j0369Bv1ZzP1bXqQ9j ENCSR704IJM https://www.encodeproject.org/experiments/ENCSR704IJM transcription factor EP300-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF211ZVW https://www.encodeproject.org/files/ENCFF211ZVW/@@download/ENCFF211ZVW.bam ENCFF076HWD https://www.encodeproject.org/files/ENCFF076HWD/@@download/ENCFF076HWD.bam 85.8 M 0 75.4 M 0.879 PE 76 76 native 31.0 M 0.0 M 29.6 M 0.691 0.96 0.96 22.82 100 1.07 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/ccc8bcfe-2506-4933-860f-ddc717303d9d/@@download/cross_correlation_plot/ENCFF751ZBOENCFF326ZSE.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB800CCK richard-myers:SL161311 "ENCFF326ZSE,ENCFF751ZBO" HiSeq 2000 2016-11-08T22:47:00.439030+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYpzj03696ZqxyXxbxffYK ENCSR761RDB https://www.encodeproject.org/experiments/ENCSR761RDB transcription factor EP300-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF223YMP https://www.encodeproject.org/files/ENCFF223YMP/@@download/ENCFF223YMP.bam ENCFF238MXX https://www.encodeproject.org/files/ENCFF238MXX/@@download/ENCFF238MXX.bam 85.8 M 0 74.9 M 0.873 PE 76 76 native 30.9 M 0.0 M 29.9 M 0.696 0.97 0.97 28.72 100 1.07 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/f24fc705-169c-4f9d-a63c-4a524adb6884/@@download/cross_correlation_plot/ENCFF581WJAENCFF016QKU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB665QGV richard-myers:SL161310 "ENCFF016QKU,ENCFF581WJA" HiSeq 2000 2016-11-08T22:47:46.086811+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYqB003697pV4kg5bgvXXQ ENCSR170NMC https://www.encodeproject.org/experiments/ENCSR170NMC "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF315PWO https://www.encodeproject.org/files/ENCFF315PWO/@@download/ENCFF315PWO.bam ENCFF299HJB https://www.encodeproject.org/files/ENCFF299HJB/@@download/ENCFF299HJB.bam 91.0 M 0 81.8 M 0.899 PE 76 76 native 34.0 M 0.0 M 32.9 M 0.723 0.97 0.97 30.78 110 1.24 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/89074294-e3b9-4ad8-bb42-61b46f8634b5/@@download/cross_correlation_plot/ENCFF415LTOENCFF963NAF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB597RVK richard-myers:SL161309 "ENCFF415LTO,ENCFF963NAF" HiSeq 2000 2016-11-08T22:42:02.018184+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYxq80369FZkkqQkV4KX8F ENCSR714EQS https://www.encodeproject.org/experiments/ENCSR714EQS "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF259CDS https://www.encodeproject.org/files/ENCFF259CDS/@@download/ENCFF259CDS.bam ENCFF308UPV https://www.encodeproject.org/files/ENCFF308UPV/@@download/ENCFF308UPV.bam 82.9 M 0 70.0 M 0.844 PE 76 76 native 29.3 M 0.0 M 28.6 M 0.690 0.98 0.97 39.81 105 1.75 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/212d60b6-7b44-483b-89a7-f9ed4d70bd38/@@download/cross_correlation_plot/ENCFF150ATPENCFF814ZXA.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB938BDD richard-myers:SL161308 "ENCFF150ATP,ENCFF814ZXA" HiSeq 2000 2016-11-08T22:42:04.561246+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYxQ803691z1J9q5qKfvg0 ENCSR930CPA https://www.encodeproject.org/experiments/ENCSR930CPA "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human transverse colon tissue 1 richard-myers ENCODE3 GRCh38 ENCFF602TRG https://www.encodeproject.org/files/ENCFF602TRG/@@download/ENCFF602TRG.bam ENCFF152TJI https://www.encodeproject.org/files/ENCFF152TJI/@@download/ENCFF152TJI.bam 80.9 M 0 65.1 M 0.804 PE 76 76 native 26.8 M 0.0 M 26.0 M 0.643 0.97 0.97 32.88 100 1.95 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5320d3b-14ab-4525-8b4c-d5d26501b253/@@download/cross_correlation_plot/ENCFF687SPDENCFF269TVU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB108KPB richard-myers:SL161305 "ENCFF269TVU,ENCFF687SPD" HiSeq 2000 2016-11-08T22:41:27.535880+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0JYxb00369PJxfVGQp32bbF ENCSR000BJV https://www.encodeproject.org/experiments/ENCSR000BJV control Control-human U-87 MG immortalized cell line richard-myers ENCODE2 no fastqs requires lab review ENCSR000BOC https://www.encodeproject.org/experiments/ENCSR000BOC control Control-human U-87 MG immortalized cell line 1 richard-myers ENCODE2 GRCh38 ENCFF285OFZ https://www.encodeproject.org/files/ENCFF285OFZ/@@download/ENCFF285OFZ.bam ENCFF220JJW https://www.encodeproject.org/files/ENCFF220JJW/@@download/ENCFF220JJW.bam 30.7 M 0 27.5 M 0.896 SE 36 36 native 0.0 M 19.8 M 17.1 M 0.556 0.94 0.94 17.52 135 1.05 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/540fbcda-d3bb-4481-a0af-e34c7d9d61de/@@download/cross_correlation_plot/ENCFF000RLP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JDW richard-myers:SL2338 ENCFF000RLP Illumina Genome Analyzer 2016-10-26T17:58:56.727110+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08234803698F1qV3kBFq2z2 ENCSR000BOC https://www.encodeproject.org/experiments/ENCSR000BOC control Control-human U-87 MG immortalized cell line 2 richard-myers ENCODE2 GRCh38 ENCFF371KBU https://www.encodeproject.org/files/ENCFF371KBU/@@download/ENCFF371KBU.bam ENCFF177VIE https://www.encodeproject.org/files/ENCFF177VIE/@@download/ENCFF177VIE.bam 49.8 M 0 44.8 M 0.900 SE 36 36 native 0.0 M 35.2 M 33.8 M 0.679 0.97 0.97 33.20 70 1.02 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba1a137b-fe9f-4dd9-9758-24b986d6a957/@@download/cross_correlation_plot/ENCFF000RLU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB559JCP richard-myers:SL3777 ENCFF000RLU Illumina Genome Analyzer 2016-10-26T18:07:09.071306+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0823BQ0369KPb3j15B4p8b2 ENCSR051VGO https://www.encodeproject.org/experiments/ENCSR051VGO control Control-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF125PRC https://www.encodeproject.org/files/ENCFF125PRC/@@download/ENCFF125PRC.bam ENCFF063RMC https://www.encodeproject.org/files/ENCFF063RMC/@@download/ENCFF063RMC.bam 64.2 M 0 52.7 M 0.821 PE 76 76 native 21.2 M 0.0 M 20.8 M 0.649 0.98 0.98 60.57 -5 1.02 0.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/04ea67b1-a46c-4679-b51b-029cf5848c3a/@@download/cross_correlation_plot/ENCFF435UGQENCFF434FCG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB067QKQ richard-myers:SL161426 "ENCFF434FCG,ENCFF435UGQ" HiSeq 2000 2017-02-02T01:04:50.850399+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293J3803695y6gFJ6jy81jk ENCSR398EZJ https://www.encodeproject.org/experiments/ENCSR398EZJ control Control-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF568QOC https://www.encodeproject.org/files/ENCFF568QOC/@@download/ENCFF568QOC.bam ENCFF321SWT https://www.encodeproject.org/files/ENCFF321SWT/@@download/ENCFF321SWT.bam 65.6 M 0 56.7 M 0.864 PE 76 76 native 23.1 M 0.0 M 22.6 M 0.689 0.98 0.98 49.15 300 1.01 0.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/121e9093-ed2f-4722-8ee3-2ffc1a369881/@@download/cross_correlation_plot/ENCFF354FARENCFF869CER.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB221SSF richard-myers:SL161427 "ENCFF869CER,ENCFF354FAR" HiSeq 2000 2017-02-02T01:04:40.296515+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292P0Q03696Kgy2J6PFqqq9 ENCSR508MUL https://www.encodeproject.org/experiments/ENCSR508MUL control Control-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF025ELW https://www.encodeproject.org/files/ENCFF025ELW/@@download/ENCFF025ELW.bam ENCFF471TLL https://www.encodeproject.org/files/ENCFF471TLL/@@download/ENCFF471TLL.bam 66.1 M 0 55.8 M 0.844 PE 76 76 native 22.5 M 0.0 M 22.2 M 0.670 0.98 0.98 58.62 315 1.01 0.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/c78745d3-268b-44c3-8f92-43b458271a80/@@download/cross_correlation_plot/ENCFF720TXTENCFF887QUQ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB502DBQ richard-myers:SL161429 "ENCFF887QUQ,ENCFF720TXT" HiSeq 2000 2017-02-02T01:04:03.191145+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293B5003693jxfkJ697fv5j ENCSR703OGS https://www.encodeproject.org/experiments/ENCSR703OGS control Control-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF272GLK https://www.encodeproject.org/files/ENCFF272GLK/@@download/ENCFF272GLK.bam ENCFF449USF https://www.encodeproject.org/files/ENCFF449USF/@@download/ENCFF449USF.bam 171.5 M 0 140.5 M 0.819 PE 76 76 native 55.9 M 0.0 M 54.8 M 0.640 0.98 0.98 60.86 250 1.01 0.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/827771f6-995e-4513-9a99-ab1a40161a04/@@download/cross_correlation_plot/ENCFF760ETAENCFF725DAD.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB680AKS richard-myers:SL161432 "ENCFF725DAD,ENCFF760ETA" HiSeq 2000 2017-02-02T07:50:54.259958+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293X000369BvG3VJ5qF22Q1 ENCSR762NXP https://www.encodeproject.org/experiments/ENCSR762NXP control Control-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF389ZAK https://www.encodeproject.org/files/ENCFF389ZAK/@@download/ENCFF389ZAK.bam ENCFF263NGC https://www.encodeproject.org/files/ENCFF263NGC/@@download/ENCFF263NGC.bam 64.9 M 0 53.3 M 0.822 PE 76 76 native 21.5 M 0.0 M 21.1 M 0.651 0.98 0.98 54.48 340 1.01 0.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/25afbadf-cc9d-4f6d-b93d-0a38985b5cd7/@@download/cross_correlation_plot/ENCFF031GRRENCFF132BCH.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB169FEN richard-myers:SL161428 "ENCFF031GRR,ENCFF132BCH" HiSeq 2000 2017-02-02T01:07:42.709468+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2930B003696Kgy2J6PFqv84 ENCSR949XFR https://www.encodeproject.org/experiments/ENCSR949XFR control Control-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF535QLE https://www.encodeproject.org/files/ENCFF535QLE/@@download/ENCFF535QLE.bam ENCFF247ICN https://www.encodeproject.org/files/ENCFF247ICN/@@download/ENCFF247ICN.bam 56.1 M 0 48.1 M 0.858 PE 76 76 native 19.4 M 0.0 M 19.0 M 0.678 0.98 0.98 53.80 345 1.01 0.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a081c64-4219-489c-a0c3-e8cfd7ef0a5a/@@download/cross_correlation_plot/ENCFF007TGSENCFF472CPZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB913MEN richard-myers:SL161430 "ENCFF472CPZ,ENCFF007TGS" HiSeq 2000 2017-02-02T01:04:42.321190+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F29313Q0369BpyVQJ710fvyV ENCSR976HZM https://www.encodeproject.org/experiments/ENCSR976HZM control Control-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF462HXY https://www.encodeproject.org/files/ENCFF462HXY/@@download/ENCFF462HXY.bam ENCFF820OLF https://www.encodeproject.org/files/ENCFF820OLF/@@download/ENCFF820OLF.bam 43.4 M 0 37.9 M 0.873 PE 76 76 native 15.3 M 0.0 M 15.0 M 0.690 0.98 0.98 52.64 290 1.01 0.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/8a45a1cc-4ccb-4974-a7ae-7e9e5c3dbc99/@@download/cross_correlation_plot/ENCFF388FATENCFF413RZV.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB348TAL richard-myers:SL161431 "ENCFF388FAT,ENCFF413RZV" HiSeq 2000 2017-02-02T01:03:45.130354+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292jY003693jxfkJ697fqZF ENCSR000MMZ https://www.encodeproject.org/experiments/ENCSR000MMZ transcription factor EP300-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF527JNQ https://www.encodeproject.org/files/ENCFF527JNQ/@@download/ENCFF527JNQ.bam ENCFF774SQL https://www.encodeproject.org/files/ENCFF774SQL/@@download/ENCFF774SQL.bam 132.3 M 0 113.1 M 0.854 PE 76 76 native 45.6 M 0.0 M 44.0 M 0.665 0.97 0.97 29.05 100 1.12 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/db6b9d3b-005f-4ae0-bda4-41552662b97d/@@download/cross_correlation_plot/ENCFF450ZWTENCFF117VHU.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB094EOT richard-myers:SL161434 "ENCFF450ZWT,ENCFF117VHU" HiSeq 2000 2017-02-02T05:03:33.955783+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Qk00369200gbFPKvPJXJ ENCSR290QBB https://www.encodeproject.org/experiments/ENCSR290QBB transcription factor EP300-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF906VNO https://www.encodeproject.org/files/ENCFF906VNO/@@download/ENCFF906VNO.bam ENCFF544NWF https://www.encodeproject.org/files/ENCFF544NWF/@@download/ENCFF544NWF.bam 69.0 M 0 59.6 M 0.864 PE 76 76 native 24.0 M 0.0 M 23.1 M 0.670 0.96 0.96 28.19 90 1.12 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f172a01-e33b-49db-aeea-8c8a1009cc38/@@download/cross_correlation_plot/ENCFF482HKOENCFF783OVZ.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB572PFM richard-myers:SL161437 "ENCFF482HKO,ENCFF783OVZ" HiSeq 2000 2017-02-02T01:04:45.256574+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292yVQ03693jxfkJ697fqq9 ENCSR635XLM https://www.encodeproject.org/experiments/ENCSR635XLM transcription factor EP300-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF874WSE https://www.encodeproject.org/files/ENCFF874WSE/@@download/ENCFF874WSE.bam ENCFF605PCA https://www.encodeproject.org/files/ENCFF605PCA/@@download/ENCFF605PCA.bam 61.5 M 0 54.4 M 0.885 PE 76 76 native 22.4 M 0.0 M 21.7 M 0.706 0.97 0.97 33.09 95 1.12 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/ed64ac39-ef1b-4616-be95-efa3b723af35/@@download/cross_correlation_plot/ENCFF278HOZENCFF818QPF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB947FIL richard-myers:SL161436 "ENCFF278HOZ,ENCFF818QPF" HiSeq 2000 2017-02-02T01:22:41.587045+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F293KJQ03698K796J5yq8QvX ENCSR828PZH https://www.encodeproject.org/experiments/ENCSR828PZH transcription factor EP300-human upper lobe of left lung tissue 1 richard-myers ENCODE3 GRCh38 ENCFF397ADX https://www.encodeproject.org/files/ENCFF397ADX/@@download/ENCFF397ADX.bam ENCFF254YDK https://www.encodeproject.org/files/ENCFF254YDK/@@download/ENCFF254YDK.bam 66.7 M 0 59.1 M 0.886 PE 76 76 native 24.2 M 0.0 M 23.3 M 0.700 0.97 0.97 29.60 95 1.13 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/d519b1b4-7ee2-4c0d-a559-4ece11a92208/@@download/cross_correlation_plot/ENCFF308YUIENCFF170LID.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB275HIS richard-myers:SL161438 "ENCFF308YUI,ENCFF170LID" HiSeq 2000 2017-02-02T01:07:07.928787+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F29372003693jxfkJ697fv4K ENCSR497NXD https://www.encodeproject.org/experiments/ENCSR497NXD "other context,other post-translational modification,transcription factor" POLR2AphosphoS5-human upper lobe of left lung tissue richard-myers ENCODE3 no fastqs unreviewed ENCSR032SLG https://www.encodeproject.org/experiments/ENCSR032SLG control Control-human vagina tissue 1 richard-myers ENCODE3 GRCh38 ENCFF700NLK https://www.encodeproject.org/files/ENCFF700NLK/@@download/ENCFF700NLK.bam ENCFF272RAI https://www.encodeproject.org/files/ENCFF272RAI/@@download/ENCFF272RAI.bam 157.7 M 0 133.1 M 0.844 PE 76 76 native 53.6 M 0.0 M 51.9 M 0.659 0.97 0.97 32.08 275 1.01 0.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/4fc0d287-dad7-4609-b423-de6ae4637463/@@download/cross_correlation_plot/ENCFF299YUYENCFF452ZZF.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB841KMY richard-myers:SL161495 "ENCFF299YUY,ENCFF452ZZF" HiSeq 2000 2017-02-02T06:45:08.990911+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Xp003696Kgy2J6PFqqvf ENCSR466CAA https://www.encodeproject.org/experiments/ENCSR466CAA control Control-human vagina tissue 1 richard-myers ENCODE3 GRCh38 ENCFF023RNK https://www.encodeproject.org/files/ENCFF023RNK/@@download/ENCFF023RNK.bam ENCFF441NVS https://www.encodeproject.org/files/ENCFF441NVS/@@download/ENCFF441NVS.bam 83.6 M 0 73.3 M 0.877 PE 76 76 native 30.1 M 0.0 M 28.9 M 0.692 0.96 0.96 25.70 320 1.01 0.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/9e293acc-f8c2-40c2-89be-229438ef210c/@@download/cross_correlation_plot/ENCFF974UBBENCFF588NFI.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB400VDX richard-myers:SL161492 "ENCFF588NFI,ENCFF974UBB" HiSeq 2000 2017-02-02T01:06:50.987806+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292GQ00369P4VQpFPXJ77QX ENCSR475KZM https://www.encodeproject.org/experiments/ENCSR475KZM control Control-human vagina tissue 1 richard-myers ENCODE3 GRCh38 ENCFF845FAE https://www.encodeproject.org/files/ENCFF845FAE/@@download/ENCFF845FAE.bam ENCFF556HNY https://www.encodeproject.org/files/ENCFF556HNY/@@download/ENCFF556HNY.bam 91.7 M 0 82.2 M 0.896 PE 76 76 native 34.1 M 0.0 M 32.5 M 0.708 0.95 0.95 21.20 90 1.06 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c073c10-fe12-4e43-9a7c-6411e4eb9751/@@download/cross_correlation_plot/ENCFF829TXJENCFF366SRC.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB162JLP richard-myers:SL161493 "ENCFF366SRC,ENCFF829TXJ" HiSeq 2000 2017-02-02T01:50:25.529839+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Z1803695y6gFJ6jy818P ENCSR538IHE https://www.encodeproject.org/experiments/ENCSR538IHE control Control-human vagina tissue 1 richard-myers ENCODE3 GRCh38 ENCFF977FWU https://www.encodeproject.org/files/ENCFF977FWU/@@download/ENCFF977FWU.bam ENCFF311NUX https://www.encodeproject.org/files/ENCFF311NUX/@@download/ENCFF311NUX.bam 105.2 M 0 93.0 M 0.883 PE 76 76 native 38.1 M 0.0 M 36.3 M 0.691 0.95 0.95 21.82 325 1.00 0.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/09fd81bf-a3a7-4311-a5fc-ab9ff1b1417e/@@download/cross_correlation_plot/ENCFF654AVJENCFF241WBG.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB331NJU richard-myers:SL161494 "ENCFF654AVJ,ENCFF241WBG" HiSeq 2000 2017-02-02T03:10:39.062021+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F29324j03693jxfkJ697fv1B ENCSR877SNO https://www.encodeproject.org/experiments/ENCSR877SNO transcription factor EP300-human vagina tissue 1 richard-myers ENCODE3 GRCh38 ENCFF644RTP https://www.encodeproject.org/files/ENCFF644RTP/@@download/ENCFF644RTP.bam ENCFF665GNK https://www.encodeproject.org/files/ENCFF665GNK/@@download/ENCFF665GNK.bam 82.6 M 0 78.5 M 0.951 PE 76 76 native 33.2 M 0.0 M 26.2 M 0.634 0.79 0.78 4.30 150 1.06 2.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6342cfd-3e61-469a-8c45-e5584e45663f/@@download/cross_correlation_plot/ENCFF554MGZENCFF228VLO.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB809WHU richard-myers:SL161485 "ENCFF228VLO,ENCFF554MGZ" HiSeq 2000 2017-02-02T01:43:17.334289+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292Y900369BvG3VJ5qF21y0 ENCSR975QNR https://www.encodeproject.org/experiments/ENCSR975QNR transcription factor EP300-human vagina tissue 1 richard-myers ENCODE3 GRCh38 ENCFF085VAF https://www.encodeproject.org/files/ENCFF085VAF/@@download/ENCFF085VAF.bam ENCFF377WOB https://www.encodeproject.org/files/ENCFF377WOB/@@download/ENCFF377WOB.bam 117.1 M 0 110.7 M 0.946 PE 76 76 native 45.1 M 0.0 M 37.2 M 0.635 0.83 0.82 5.44 160 1.08 2.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/ef91cb2d-bed1-4f30-8679-e5c70eda1869/@@download/cross_correlation_plot/ENCFF257PAWENCFF656FMR.raw.srt.filt.srt.nodup.filt.nodup.sample.15.MATE1.tagAlign.gz.cc.plot.pdf ENCLB948PGH richard-myers:SL161487 "ENCFF257PAW,ENCFF656FMR" HiSeq 2000 2017-02-02T03:11:10.099729+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F292f2Q03696Kgy2J6PFqqz8 ENCSR000EZS https://www.encodeproject.org/experiments/ENCSR000EZS control Control-human endothelial cell of umbilical vein primary cell sherman-weissman ENCODE2 pending SE 34 Illumina Genome Analyzer pipeline completed ENCSR000EYX https://www.encodeproject.org/experiments/ENCSR000EYX control Control-human GM12878 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF157YWH https://www.encodeproject.org/files/ENCFF157YWH/@@download/ENCFF157YWH.bam ENCFF966PUO https://www.encodeproject.org/files/ENCFF966PUO/@@download/ENCFF966PUO.bam 14.0 M 0 13.6 M 0.977 SE 28 28 native 0.0 M 9.3 M 8.9 M 0.635 0.97 0.97 43.95 80 1.05 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/71ed357a-c1a0-4234-8c14-2cfa80e38e14/@@download/cross_correlation_plot/ENCFF000VWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GTS ENCFF000VWV Illumina Genome Analyzer 2016-10-26T17:35:14.438051+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Xz80369Bj2bF0JP9JJvb ENCSR000EYZ https://www.encodeproject.org/experiments/ENCSR000EYZ transcription factor FOS-human GM12878 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer processing ENCSR000EYV https://www.encodeproject.org/experiments/ENCSR000EYV transcription factor JUND-human GM12878 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer processing ENCSR000EYW https://www.encodeproject.org/experiments/ENCSR000EYW transcription factor POLR2A-human GM12878 immortalized cell line sherman-weissman ENCODE2 no fastqs unrunnable ENCSR000EYU https://www.encodeproject.org/experiments/ENCSR000EYU transcription factor POLR3G-human GM12878 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer processing ENCSR000EZB https://www.encodeproject.org/experiments/ENCSR000EZB control Control-human HEK293 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF098EXS https://www.encodeproject.org/files/ENCFF098EXS/@@download/ENCFF098EXS.bam ENCFF036GEF https://www.encodeproject.org/files/ENCFF036GEF/@@download/ENCFF036GEF.bam 15.8 M 0 15.2 M 0.966 SE 30 25 25 0.0 M 9.8 M 8.7 M 0.554 0.90 0.89 7.86 85 1.05 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc97e291-36c2-41b1-a2be-0020525834aa/@@download/cross_correlation_plot/ENCFF000WXT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GTU ENCFF000WXT Illumina Genome Analyzer 2016-12-13T03:04:20.832347+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxJQ0369K8k6p8qBfB7yk ENCSR000EZA https://www.encodeproject.org/experiments/ENCSR000EZA transcription factor POLR2A-human HEK293 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF903DXF https://www.encodeproject.org/files/ENCFF903DXF/@@download/ENCFF903DXF.bam ENCFF807CGF https://www.encodeproject.org/files/ENCFF807CGF/@@download/ENCFF807CGF.bam 5.2 M 0 4.8 M 0.924 SE 30 25 25 0.0 M 3.2 M 2.4 M 0.455 0.73 0.64 1.84 85 2.85 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/d09fc9c9-86d1-4b8e-b072-78886910b109/@@download/cross_correlation_plot/ENCFF000WYA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GTV ENCFF000WYA Illumina Genome Analyzer 2016-12-13T02:46:36.046179+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zvk803695Kj1j8qPQj0Q1 ENCSR000EZA https://www.encodeproject.org/experiments/ENCSR000EZA transcription factor POLR2A-human HEK293 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF415LVI https://www.encodeproject.org/files/ENCFF415LVI/@@download/ENCFF415LVI.bam ENCFF251ZVU https://www.encodeproject.org/files/ENCFF251ZVU/@@download/ENCFF251ZVU.bam 2.8 M 0 2.4 M 0.865 SE 25 25 25 0.0 M 1.5 M 1.2 M 0.436 0.80 0.76 3.13 80 2.31 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/c6f83939-3d4b-4f8f-8959-05385cb39eca/@@download/cross_correlation_plot/ENCFF000WYH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GTW ENCFF000WYH Illumina Genome Analyzer 2016-12-13T02:29:17.290571+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxQj03697K4B1J71py8XB ENCSR000EZA https://www.encodeproject.org/experiments/ENCSR000EZA transcription factor POLR2A-human HEK293 immortalized cell line 3 sherman-weissman ENCODE2 GRCh38 ENCFF861OAZ https://www.encodeproject.org/files/ENCFF861OAZ/@@download/ENCFF861OAZ.bam ENCFF529GMW https://www.encodeproject.org/files/ENCFF529GMW/@@download/ENCFF529GMW.bam 3.1 M 0 2.7 M 0.865 SE 25 25 25 0.0 M 1.8 M 1.5 M 0.481 0.84 0.81 4.37 85 3.54 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c526ced-a674-4412-bc6c-49bc7aa693b5/@@download/cross_correlation_plot/ENCFF000WYG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GTX ENCFF000WYG Illumina Genome Analyzer 2016-12-13T02:47:54.969515+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zyk003697K4B1J71py8YV ENCSR000EZG https://www.encodeproject.org/experiments/ENCSR000EZG control Control-human HeLa-S3 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF973RIY https://www.encodeproject.org/files/ENCFF973RIY/@@download/ENCFF973RIY.bam ENCFF121KUJ https://www.encodeproject.org/files/ENCFF121KUJ/@@download/ENCFF121KUJ.bam 16.3 M 0 15.3 M 0.939 SE 28 28 native 0.0 M 9.7 M 9.4 M 0.579 0.97 0.98 44.07 95 1.01 0.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/dc5a4396-0732-4ff7-bdcc-a09882f7df00/@@download/cross_correlation_plot/ENCFF000XJE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUJ ENCFF000XJE Illumina Genome Analyzer 2016-10-26T17:58:55.033017+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08229803695140QP5B2vfYb ENCSR000EZG https://www.encodeproject.org/experiments/ENCSR000EZG control Control-human HeLa-S3 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF019TTG https://www.encodeproject.org/files/ENCFF019TTG/@@download/ENCFF019TTG.bam ENCFF736EYF https://www.encodeproject.org/files/ENCFF736EYF/@@download/ENCFF736EYF.bam 10.8 M 0 10.2 M 0.941 SE 28 28 native 0.0 M 7.0 M 6.9 M 0.638 0.98 0.98 44.38 110 1.02 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/1165f999-c2f0-49a8-a973-b0c02cec7b01/@@download/cross_correlation_plot/ENCFF000XJD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GTY ENCFF000XJD Illumina Genome Analyzer 2016-10-26T17:58:35.816200+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0822KQ03697KPkyX9BPPpxv ENCSR000EZG https://www.encodeproject.org/experiments/ENCSR000EZG control Control-human HeLa-S3 immortalized cell line 3 sherman-weissman ENCODE2 GRCh38 ENCFF813HOR https://www.encodeproject.org/files/ENCFF813HOR/@@download/ENCFF813HOR.bam ENCFF484GNC https://www.encodeproject.org/files/ENCFF484GNC/@@download/ENCFF484GNC.bam 10.6 M 0 10.0 M 0.940 SE 28 28 native 0.0 M 6.8 M 6.6 M 0.622 0.98 0.98 44.95 105 1.01 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/0bd5b3bd-0390-452b-914f-29f718cc9e4d/@@download/cross_correlation_plot/ENCFF000XJG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUB ENCFF000XJG Illumina Genome Analyzer 2016-10-26T17:58:11.489351+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0822Zj0369GJ6xQfbB7Bk5Z ENCSR000EZH https://www.encodeproject.org/experiments/ENCSR000EZH control Control-human HeLa-S3 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF872NPM https://www.encodeproject.org/files/ENCFF872NPM/@@download/ENCFF872NPM.bam ENCFF054OSH https://www.encodeproject.org/files/ENCFF054OSH/@@download/ENCFF054OSH.bam 11.7 M 0 11.4 M 0.971 SE 28 28 native 0.0 M 6.8 M 6.7 M 0.572 0.99 0.99 72.55 130 1.04 6.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/08e8b54e-483d-4d60-b3d1-7aefd2f5ef2f/@@download/cross_correlation_plot/ENCFF000XID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUC ENCFF000XID Illumina Genome Analyzer 2016-10-26T17:57:46.910145+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F08247Q0369BX1xqb1B8089y ENCSR000EZH https://www.encodeproject.org/experiments/ENCSR000EZH control Control-human HeLa-S3 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF063KUY https://www.encodeproject.org/files/ENCFF063KUY/@@download/ENCFF063KUY.bam ENCFF920HRJ https://www.encodeproject.org/files/ENCFF920HRJ/@@download/ENCFF920HRJ.bam 12.7 M 0 12.3 M 0.965 SE 28 28 native 0.0 M 7.0 M 6.9 M 0.539 0.98 0.98 49.74 130 1.08 4.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/15c21325-fd7d-4add-a357-6dbcc37ecbe7/@@download/cross_correlation_plot/ENCFF000XIE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUF ENCFF000XIE Illumina Genome Analyzer 2016-10-26T17:42:35.042491+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0824FQ03695140QP5B2vfZx ENCSR000EZI https://www.encodeproject.org/experiments/ENCSR000EZI control Control-human HeLa-S3 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF369VWX https://www.encodeproject.org/files/ENCFF369VWX/@@download/ENCFF369VWX.bam ENCFF543CJM https://www.encodeproject.org/files/ENCFF543CJM/@@download/ENCFF543CJM.bam 11.9 M 0 11.1 M 0.931 SE 28 28 native 0.0 M 8.3 M 8.1 M 0.683 0.98 0.98 48.87 95 1.01 0.99 https://www.encodeproject.org/chipseq-filter-quality-metrics/b09a1ada-663b-433d-a06b-9521144280a4/@@download/cross_correlation_plot/ENCFF000XHJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GTZ ENCFF000XHJ Illumina Genome Analyzer 2016-10-26T17:41:56.360718+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826700369F7fQjy59kFgvX ENCSR000EZI https://www.encodeproject.org/experiments/ENCSR000EZI control Control-human HeLa-S3 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF796KNY https://www.encodeproject.org/files/ENCFF796KNY/@@download/ENCFF796KNY.bam ENCFF610OXJ https://www.encodeproject.org/files/ENCFF610OXJ/@@download/ENCFF610OXJ.bam 12.6 M 0 11.5 M 0.914 SE 28 28 native 0.0 M 8.6 M 5.6 M 0.441 0.65 0.52 1.17 -45 1.01 0.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/891f58c0-2b4c-44e3-92ef-1c466078a68e/@@download/cross_correlation_plot/ENCFF000XHP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUA ENCFF000XHP Illumina Genome Analyzer 2016-10-26T17:41:51.088067+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0826Gj036923pJJqk9xzYkP ENCSR000EZM https://www.encodeproject.org/experiments/ENCSR000EZM control Control-human HeLa-S3 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF390CZH https://www.encodeproject.org/files/ENCFF390CZH/@@download/ENCFF390CZH.bam ENCFF716LLX https://www.encodeproject.org/files/ENCFF716LLX/@@download/ENCFF716LLX.bam 31.2 M 0 28.9 M 0.926 SE 30 30 native 0.0 M 17.5 M 14.7 M 0.470 0.84 0.81 4.43 130 1.05 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/20792335-0e5f-4be4-bc30-46ae1fde5275/@@download/cross_correlation_plot/ENCFF000XGP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUS ENCFF000XGP Illumina Genome Analyzer II 2016-10-26T17:37:25.484716+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5XQJf803694pb4BG0y2J6k8 ENCSR000EZN https://www.encodeproject.org/experiments/ENCSR000EZN control Control-human HeLa-S3 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF529KRU https://www.encodeproject.org/files/ENCFF529KRU/@@download/ENCFF529KRU.bam ENCFF610EFV https://www.encodeproject.org/files/ENCFF610EFV/@@download/ENCFF610EFV.bam 23.9 M 0 22.2 M 0.929 SE 28 28 native 0.0 M 14.2 M 13.3 M 0.556 0.95 0.95 21.70 155 1.05 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/eef6fab2-5c65-4836-8bb2-00d9f88c2892/@@download/cross_correlation_plot/ENCFF000XOO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUV ENCFF000XOO Illumina Genome Analyzer 2016-10-26T17:36:00.062423+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Y3j0369J2Pxk91P1yF9q ENCSR000EZE https://www.encodeproject.org/experiments/ENCSR000EZE transcription factor FOS-human HeLa-S3 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EZF https://www.encodeproject.org/experiments/ENCSR000EZF transcription factor MAX-human HeLa-S3 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EZJ https://www.encodeproject.org/experiments/ENCSR000EZJ control mouse-IgG-control-human HeLa-S3 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF264XNY https://www.encodeproject.org/files/ENCFF264XNY/@@download/ENCFF264XNY.bam ENCFF203JTC https://www.encodeproject.org/files/ENCFF203JTC/@@download/ENCFF203JTC.bam 15.0 M 0 13.9 M 0.924 SE 28 28 native 0.0 M 10.1 M 9.7 M 0.644 0.96 0.96 23.51 -40 1.01 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/a77b990e-503f-49ac-9e03-c08f6360ba84/@@download/cross_correlation_plot/ENCFF000XIG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUM ENCFF000XIG Illumina Genome Analyzer 2016-10-26T17:36:22.944611+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082g680369KxbFbzV9pvvq9 ENCSR000EZJ https://www.encodeproject.org/experiments/ENCSR000EZJ control mouse-IgG-control-human HeLa-S3 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF169QRT https://www.encodeproject.org/files/ENCFF169QRT/@@download/ENCFF169QRT.bam ENCFF380EDG https://www.encodeproject.org/files/ENCFF380EDG/@@download/ENCFF380EDG.bam 16.2 M 0 14.9 M 0.922 SE 28 28 native 0.0 M 11.1 M 10.6 M 0.653 0.95 0.96 23.21 100 1.02 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/08d354ae-9038-41e9-b9f1-e8d37e9818d5/@@download/cross_correlation_plot/ENCFF000XIH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUL ENCFF000XIH Illumina Genome Analyzer 2016-10-26T17:36:06.405281+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082gB00369F7fQjy59kFjGq ENCSR000EZD https://www.encodeproject.org/experiments/ENCSR000EZD transcription factor MYC-human HeLa-S3 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EZL https://www.encodeproject.org/experiments/ENCSR000EZL transcription factor POLR2A-human HeLa-S3 immortalized cell line sherman-weissman ENCODE2 pending SE "27,28" Illumina Genome Analyzer unreviewed ENCSR000EZC https://www.encodeproject.org/experiments/ENCSR000EZC transcription factor SMARCA4-human HeLa-S3 immortalized cell line sherman-weissman ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EZK https://www.encodeproject.org/experiments/ENCSR000EZK transcription factor STAT1-human HeLa-S3 immortalized cell line sherman-weissman ENCODE2 pending SE 28 Illumina Genome Analyzer unreviewed ENCSR000EZR https://www.encodeproject.org/experiments/ENCSR000EZR control Control-human HepG2 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF455IYM https://www.encodeproject.org/files/ENCFF455IYM/@@download/ENCFF455IYM.bam ENCFF928XJB https://www.encodeproject.org/files/ENCFF928XJB/@@download/ENCFF928XJB.bam 1.8 M 0 1.6 M 0.908 SE 27 27 native 0.0 M 1.0 M 1.0 M 0.546 0.99 0.99 192.47 60 1.03 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/d23e85c6-c3da-415d-bfcf-1a2d36293e0e/@@download/cross_correlation_plot/ENCFF000XSV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GUX ENCFF000XSV Illumina Genome Analyzer 2016-10-26T17:35:18.293253+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Vx003697KPkyX9BPPq86 ENCSR000EZR https://www.encodeproject.org/experiments/ENCSR000EZR control Control-human HepG2 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF232BBB https://www.encodeproject.org/files/ENCFF232BBB/@@download/ENCFF232BBB.bam ENCFF431OJT https://www.encodeproject.org/files/ENCFF431OJT/@@download/ENCFF431OJT.bam 3.8 M 0 3.6 M 0.963 SE 27 27 native 0.0 M 2.4 M 2.3 M 0.621 0.98 0.98 58.71 95 1.02 0.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/b37b4b94-9f14-4ef0-9902-ef9f1ceaa9cc/@@download/cross_correlation_plot/ENCFF000XSY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GVF ENCFF000XSY Illumina Genome Analyzer 2016-10-26T17:35:30.857384+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082X2j036923pJJqk9xzZ09 ENCSR000EZR https://www.encodeproject.org/experiments/ENCSR000EZR control Control-human HepG2 immortalized cell line 3 sherman-weissman ENCODE2 GRCh38 ENCFF923FIF https://www.encodeproject.org/files/ENCFF923FIF/@@download/ENCFF923FIF.bam ENCFF806LCL https://www.encodeproject.org/files/ENCFF806LCL/@@download/ENCFF806LCL.bam 5.3 M 0 5.2 M 0.984 SE 27 27 native 0.0 M 3.7 M 3.6 M 0.681 0.99 0.99 138.60 95 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/d630354a-c9b7-4c07-8a36-ba01ffe96e9b/@@download/cross_correlation_plot/ENCFF000XTB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GVE ENCFF000XTB Illumina Genome Analyzer 2016-10-26T17:35:07.286368+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082X6Q0369F7fQjy59kFj3q ENCSR000EZQ https://www.encodeproject.org/experiments/ENCSR000EZQ transcription factor POLR2A-human HepG2 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EZP https://www.encodeproject.org/experiments/ENCSR000EZP transcription factor SREBF1-human HepG2 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EZO https://www.encodeproject.org/experiments/ENCSR000EZO transcription factor SREBF2-human HepG2 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000FAA https://www.encodeproject.org/experiments/ENCSR000FAA control Control-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF332CUX https://www.encodeproject.org/files/ENCFF332CUX/@@download/ENCFF332CUX.bam ENCFF558KPF https://www.encodeproject.org/files/ENCFF558KPF/@@download/ENCFF558KPF.bam 32.0 M 0 22.9 M 0.716 SE 34 27 27 0.0 M 13.8 M 13.5 M 0.421 0.99 0.99 122.20 90 1.03 0.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ea6622e-4aae-4529-b26a-9824a604b7a1/@@download/cross_correlation_plot/ENCFF000YPF-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWX ENCFF000YPF Illumina Genome Analyzer 2016-12-13T03:54:22.841804+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zy8Q03696z7JqGk4Z07J2 ENCSR000FAB https://www.encodeproject.org/experiments/ENCSR000FAB control Control-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF767FSP https://www.encodeproject.org/files/ENCFF767FSP/@@download/ENCFF767FSP.bam ENCFF654HJW https://www.encodeproject.org/files/ENCFF654HJW/@@download/ENCFF654HJW.bam 26.7 M 0 21.6 M 0.807 SE 27 27 27 0.0 M 13.5 M 13.1 M 0.492 0.99 0.99 114.05 90 1.03 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/d250a7ad-b131-4222-a1f7-51f0e3c362b3/@@download/cross_correlation_plot/ENCFF000YOV-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWG ENCFF000YOV Illumina Genome Analyzer 2016-12-13T03:34:14.732762+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zy1Q0369K8k6p8qBfB805 ENCSR000FAK https://www.encodeproject.org/experiments/ENCSR000FAK control Control-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF332BFE https://www.encodeproject.org/files/ENCFF332BFE/@@download/ENCFF332BFE.bam ENCFF194YCE https://www.encodeproject.org/files/ENCFF194YCE/@@download/ENCFF194YCE.bam 31.6 M 0 23.3 M 0.738 SE 27 27 native 0.0 M 14.2 M 13.9 M 0.439 0.99 0.99 88.17 100 1.03 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/6bd5893c-3788-4dd4-99b6-f4bec2ef74a0/@@download/cross_correlation_plot/ENCFF000YRN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWB ENCFF000YRN Illumina Genome Analyzer 2016-10-26T17:38:38.472630+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0824bj03695YX1xgJBKFBbG ENCSR000FAK https://www.encodeproject.org/experiments/ENCSR000FAK control Control-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF123YHB https://www.encodeproject.org/files/ENCFF123YHB/@@download/ENCFF123YHB.bam ENCFF137XKW https://www.encodeproject.org/files/ENCFF137XKW/@@download/ENCFF137XKW.bam 18.8 M 0 17.8 M 0.946 SE 27 27 native 0.0 M 11.5 M 11.3 M 0.599 0.99 0.99 85.93 75 1.05 1.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/29d4231c-29bc-471b-9338-104d59fd294e/@@download/cross_correlation_plot/ENCFF000YRC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GVU ENCFF000YRC Illumina Genome Analyzer 2016-10-26T17:38:09.428823+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0824x003697KPkyX9BPPq0Q ENCSR000FBA https://www.encodeproject.org/experiments/ENCSR000FBA control Control-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF482LDC https://www.encodeproject.org/files/ENCFF482LDC/@@download/ENCFF482LDC.bam ENCFF583HKO https://www.encodeproject.org/files/ENCFF583HKO/@@download/ENCFF583HKO.bam 29.2 M 0 20.5 M 0.701 SE 34 27 27 0.0 M 12.0 M 11.8 M 0.402 0.99 0.99 154.92 100 1.03 0.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/07decdee-f88c-4662-8c50-18a272ead52b/@@download/cross_correlation_plot/ENCFF000YPZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXJ ENCFF000YPZ Illumina Genome Analyzer 2016-12-13T03:33:27.500079+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZyGQ03698ZxQY8q63XPZ4 ENCSR000FBB https://www.encodeproject.org/experiments/ENCSR000FBB control Control-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF942FFX https://www.encodeproject.org/files/ENCFF942FFX/@@download/ENCFF942FFX.bam ENCFF036AXR https://www.encodeproject.org/files/ENCFF036AXR/@@download/ENCFF036AXR.bam 26.9 M 0 17.4 M 0.647 SE 34 27 27 0.0 M 9.9 M 9.7 M 0.362 0.99 0.99 177.67 85 1.03 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/9f9a4e36-4f0e-47fe-9ee9-de71a67b1b06/@@download/cross_correlation_plot/ENCFF000YPM-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXA ENCFF000YPM Illumina Genome Analyzer 2017-02-23T23:17:35.907896+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbPzQ0369Kz9qGFk1gk6gf ENCSR000FAI https://www.encodeproject.org/experiments/ENCSR000FAI transcription factor FOS-human K562 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EZT https://www.encodeproject.org/experiments/ENCSR000EZT transcription factor JUN-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF784MLU https://www.encodeproject.org/files/ENCFF784MLU/@@download/ENCFF784MLU.bam ENCFF697LPL https://www.encodeproject.org/files/ENCFF697LPL/@@download/ENCFF697LPL.bam 17.2 M 0 12.2 M 0.709 SE 27 27 27 0.0 M 7.5 M 7.0 M 0.405 0.94 0.94 15.31 115 1.19 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/b93e9c5b-da2d-4b7d-b6e3-e0c66e0e65e4/@@download/cross_correlation_plot/ENCFF000YPL-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXC ENCFF000YPL Illumina Genome Analyzer 2017-02-24T16:19:01.284938+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbJx803691k1kQ17k3fk3G ENCSR000EZT https://www.encodeproject.org/experiments/ENCSR000EZT transcription factor JUN-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF749RRI https://www.encodeproject.org/files/ENCFF749RRI/@@download/ENCFF749RRI.bam ENCFF842TJX https://www.encodeproject.org/files/ENCFF842TJX/@@download/ENCFF842TJX.bam 19.9 M 0 11.4 M 0.575 SE 34 27 27 0.0 M 6.4 M 5.7 M 0.287 0.90 0.90 9.70 135 1.23 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/e4199c3d-3948-4d85-a50d-0d6e95c20f0d/@@download/cross_correlation_plot/ENCFF000YPN-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXB ENCFF000YPN Illumina Genome Analyzer 2017-02-24T16:19:21.182025+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2gbK4j03699fB5G18X7qGJg ENCSR000EZW https://www.encodeproject.org/experiments/ENCSR000EZW transcription factor JUN-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF814CHV https://www.encodeproject.org/files/ENCFF814CHV/@@download/ENCFF814CHV.bam ENCFF774XWQ https://www.encodeproject.org/files/ENCFF774XWQ/@@download/ENCFF774XWQ.bam 17.0 M 0 12.0 M 0.707 SE 27 27 27 0.0 M 7.2 M 7.0 M 0.410 0.97 0.97 36.94 120 1.07 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/47798e40-a883-4e3a-8924-4e80c4409415/@@download/cross_correlation_plot/ENCFF000YPR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXK ENCFF000YPR Illumina Genome Analyzer 2016-12-13T03:04:13.710555+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zvf003695yqvv8q311k8j ENCSR000EZW https://www.encodeproject.org/experiments/ENCSR000EZW transcription factor JUN-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF050LIC https://www.encodeproject.org/files/ENCFF050LIC/@@download/ENCFF050LIC.bam ENCFF581CGZ https://www.encodeproject.org/files/ENCFF581CGZ/@@download/ENCFF581CGZ.bam 20.5 M 0 11.0 M 0.539 SE 34 27 27 0.0 M 6.0 M 5.6 M 0.274 0.94 0.94 15.44 145 1.22 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/2d7b483c-c2c7-4fc0-b86b-cce4462dd888/@@download/cross_correlation_plot/ENCFF000YPP-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXE ENCFF000YPP Illumina Genome Analyzer 2016-12-13T03:14:07.886256+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zy2803690xXYVJ7Fj2x55 ENCSR000EZX https://www.encodeproject.org/experiments/ENCSR000EZX transcription factor JUN-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF643UCP https://www.encodeproject.org/files/ENCFF643UCP/@@download/ENCFF643UCP.bam ENCFF206CUX https://www.encodeproject.org/files/ENCFF206CUX/@@download/ENCFF206CUX.bam 18.8 M 0 12.2 M 0.648 SE 27 27 27 0.0 M 7.4 M 7.1 M 0.377 0.97 0.97 32.41 120 1.08 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd2a4775-e296-4e0c-9c0e-ef31f1824fb8/@@download/cross_correlation_plot/ENCFF000YPB-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWW ENCFF000YPB Illumina Genome Analyzer 2016-12-13T03:14:21.378824+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zxy0036904pZZ8v3bkxzq ENCSR000EZX https://www.encodeproject.org/experiments/ENCSR000EZX transcription factor JUN-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF479JUJ https://www.encodeproject.org/files/ENCFF479JUJ/@@download/ENCFF479JUJ.bam ENCFF780UCC https://www.encodeproject.org/files/ENCFF780UCC/@@download/ENCFF780UCC.bam 18.4 M 0 13.0 M 0.707 SE 27 27 27 0.0 M 7.8 M 7.5 M 0.411 0.96 0.96 28.20 120 1.10 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/251f5b35-80a3-40c8-9a37-32c0ccae2ac8/@@download/cross_correlation_plot/ENCFF000YPD-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWY ENCFF000YPD Illumina Genome Analyzer 2016-12-13T03:13:56.524676+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zyqj036904pZZ8v3bky1v ENCSR000FAH https://www.encodeproject.org/experiments/ENCSR000FAH transcription factor JUN-human K562 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000FAE https://www.encodeproject.org/experiments/ENCSR000FAE transcription factor MAX-human K562 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000EZU https://www.encodeproject.org/experiments/ENCSR000EZU transcription factor MYC-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF014DRH https://www.encodeproject.org/files/ENCFF014DRH/@@download/ENCFF014DRH.bam ENCFF498NBR https://www.encodeproject.org/files/ENCFF498NBR/@@download/ENCFF498NBR.bam 14.0 M 0 10.3 M 0.736 SE 27 27 27 0.0 M 6.1 M 6.1 M 0.433 0.99 0.99 139.97 105 1.20 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/31d88d3c-8292-4d02-9562-1e6061c63926/@@download/cross_correlation_plot/ENCFF000YPS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXH ENCFF000YPS Illumina Genome Analyzer 2016-12-13T02:55:15.924881+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxB00369K8k6p8qBfB7yZ ENCSR000EZU https://www.encodeproject.org/experiments/ENCSR000EZU transcription factor MYC-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF553WMU https://www.encodeproject.org/files/ENCFF553WMU/@@download/ENCFF553WMU.bam ENCFF880AXG https://www.encodeproject.org/files/ENCFF880AXG/@@download/ENCFF880AXG.bam 19.7 M 0 14.2 M 0.721 SE 34 27 27 0.0 M 9.0 M 8.6 M 0.436 0.95 0.96 23.18 130 1.72 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/661df47b-065b-4246-945d-2db2ee2b5141/@@download/cross_correlation_plot/ENCFF000YPT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXI ENCFF000YPT Illumina Genome Analyzer 2016-12-13T03:14:11.857095+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZyVQ036933PVVJ7Qq0Z7z ENCSR000EZV https://www.encodeproject.org/experiments/ENCSR000EZV transcription factor MYC-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF357MHM https://www.encodeproject.org/files/ENCFF357MHM/@@download/ENCFF357MHM.bam ENCFF268XFT https://www.encodeproject.org/files/ENCFF268XFT/@@download/ENCFF268XFT.bam 9.4 M 0 9.2 M 0.980 SE 27 27 27 0.0 M 6.6 M 6.5 M 0.692 0.99 0.99 77.73 135 1.29 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/d2b325fe-df2e-4272-b696-4b5cb650115c/@@download/cross_correlation_plot/ENCFF000YPA-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWO ENCFF000YPA Illumina Genome Analyzer 2016-12-13T02:55:18.842132+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZygQ0369K8k6p8qBfB81P ENCSR000EZV https://www.encodeproject.org/experiments/ENCSR000EZV transcription factor MYC-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF491EUN https://www.encodeproject.org/files/ENCFF491EUN/@@download/ENCFF491EUN.bam ENCFF922YDR https://www.encodeproject.org/files/ENCFF922YDR/@@download/ENCFF922YDR.bam 19.3 M 0 13.6 M 0.703 SE 34 27 27 0.0 M 7.9 M 7.9 M 0.407 0.99 0.99 135.69 100 1.15 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/33d2ae28-8bfa-4bbb-8ff3-47c48809c8ba/@@download/cross_correlation_plot/ENCFF000YPC-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWP ENCFF000YPC Illumina Genome Analyzer 2016-12-13T03:14:11.611110+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zz9j03692pJ09J76g60JK ENCSR000FAG https://www.encodeproject.org/experiments/ENCSR000FAG transcription factor MYC-human K562 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000FAZ https://www.encodeproject.org/experiments/ENCSR000FAZ transcription factor MYC-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF439NNR https://www.encodeproject.org/files/ENCFF439NNR/@@download/ENCFF439NNR.bam ENCFF877JAH https://www.encodeproject.org/files/ENCFF877JAH/@@download/ENCFF877JAH.bam 10.1 M 0 9.7 M 0.959 SE 27 27 27 0.0 M 6.8 M 6.8 M 0.668 0.99 0.99 96.55 125 1.20 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/61db61bc-1ff2-42cc-b35f-0c2f98ace680/@@download/cross_correlation_plot/ENCFF000YOR-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWH ENCFF000YOR Illumina Genome Analyzer 2016-12-13T02:55:20.321609+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxGj03696z7JqGk4Z07F7 ENCSR000FAZ https://www.encodeproject.org/experiments/ENCSR000FAZ transcription factor MYC-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF483RLD https://www.encodeproject.org/files/ENCFF483RLD/@@download/ENCFF483RLD.bam ENCFF701IFH https://www.encodeproject.org/files/ENCFF701IFH/@@download/ENCFF701IFH.bam 18.6 M 0 12.2 M 0.658 SE 27 27 27 0.0 M 6.9 M 6.9 M 0.369 0.99 0.99 122.82 105 1.12 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/36e0e3f1-a07d-437e-a658-bfbdee42cc8e/@@download/cross_correlation_plot/ENCFF000YOT-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWI ENCFF000YOT Illumina Genome Analyzer 2016-12-13T03:13:54.439128+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZyVQ03690xXYVJ7Fj2x5y ENCSR000FAF https://www.encodeproject.org/experiments/ENCSR000FAF transcription factor NFE2-human K562 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000FAJ https://www.encodeproject.org/experiments/ENCSR000FAJ transcription factor POLR2A-human K562 immortalized cell line sherman-weissman ENCODE2 pending SE 27 Illumina Genome Analyzer unreviewed ENCSR000FAW https://www.encodeproject.org/experiments/ENCSR000FAW transcription factor POLR2A-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF191CWT https://www.encodeproject.org/files/ENCFF191CWT/@@download/ENCFF191CWT.bam ENCFF274IWO https://www.encodeproject.org/files/ENCFF274IWO/@@download/ENCFF274IWO.bam 10.2 M 0 8.4 M 0.823 SE 27 27 27 0.0 M 5.7 M 5.4 M 0.530 0.96 0.96 30.18 90 2.83 1.15 https://www.encodeproject.org/chipseq-filter-quality-metrics/f2ec0bb4-f508-45ff-b59e-caeafb1b6365/@@download/cross_correlation_plot/ENCFF000YPW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXF ENCFF000YPW Illumina Genome Analyzer 2016-12-13T02:47:12.094162+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxpQ036904pZZ8v3bkxzV ENCSR000FAW https://www.encodeproject.org/experiments/ENCSR000FAW transcription factor POLR2A-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF536TPK https://www.encodeproject.org/files/ENCFF536TPK/@@download/ENCFF536TPK.bam ENCFF033BLI https://www.encodeproject.org/files/ENCFF033BLI/@@download/ENCFF033BLI.bam 16.6 M 0 12.4 M 0.749 SE 34 27 27 0.0 M 8.0 M 7.6 M 0.459 0.95 0.96 32.19 115 2.20 1.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/81baca47-b078-4a72-9f71-108f2da59930/@@download/cross_correlation_plot/ENCFF000YPU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXG ENCFF000YPU Illumina Genome Analyzer 2016-12-13T03:13:26.393399+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZyGj036904pZZ8v3bky0x ENCSR000FAX https://www.encodeproject.org/experiments/ENCSR000FAX transcription factor POLR2A-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF475BJQ https://www.encodeproject.org/files/ENCFF475BJQ/@@download/ENCFF475BJQ.bam ENCFF298OSL https://www.encodeproject.org/files/ENCFF298OSL/@@download/ENCFF298OSL.bam 9.8 M 0 9.6 M 0.983 SE 27 27 27 0.0 M 7.0 M 6.8 M 0.699 0.97 0.98 48.46 145 1.71 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/6278a1d2-dd0a-4711-a00c-6f6927f1440e/@@download/cross_correlation_plot/ENCFF000YPE-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWU ENCFF000YPE Illumina Genome Analyzer 2016-12-13T02:55:53.284256+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zxpj0369BV55708G9vF9v ENCSR000FAX https://www.encodeproject.org/experiments/ENCSR000FAX transcription factor POLR2A-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF929JPT https://www.encodeproject.org/files/ENCFF929JPT/@@download/ENCFF929JPT.bam ENCFF675OWG https://www.encodeproject.org/files/ENCFF675OWG/@@download/ENCFF675OWG.bam 17.8 M 0 13.1 M 0.735 SE 34 27 27 0.0 M 8.0 M 7.9 M 0.443 0.98 0.98 69.59 100 1.55 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/78d62f8c-e2e5-48b0-9960-dc0660c9309a/@@download/cross_correlation_plot/ENCFF000YPG-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWT ENCFF000YPG Illumina Genome Analyzer 2016-12-13T03:13:44.358976+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zyb003692pJ09J76g60G3 ENCSR000FAY https://www.encodeproject.org/experiments/ENCSR000FAY transcription factor POLR2A-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF976EMR https://www.encodeproject.org/files/ENCFF976EMR/@@download/ENCFF976EMR.bam ENCFF556FRG https://www.encodeproject.org/files/ENCFF556FRG/@@download/ENCFF556FRG.bam 10.2 M 0 10.0 M 0.980 SE 27 27 27 0.0 M 7.3 M 7.0 M 0.687 0.97 0.97 40.58 145 1.77 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/3c8e8d8f-95a6-482c-b1c6-83598fd9cb5e/@@download/cross_correlation_plot/ENCFF000YOS-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWK ENCFF000YOS Illumina Genome Analyzer 2016-12-13T02:54:47.682343+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxVQ03697xKX68qyy306P ENCSR000FAY https://www.encodeproject.org/experiments/ENCSR000FAY transcription factor POLR2A-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF323MTY https://www.encodeproject.org/files/ENCFF323MTY/@@download/ENCFF323MTY.bam ENCFF544QGF https://www.encodeproject.org/files/ENCFF544QGF/@@download/ENCFF544QGF.bam 14.0 M 0 11.2 M 0.802 SE 34 27 27 0.0 M 7.2 M 7.1 M 0.506 0.98 0.98 65.69 110 1.67 1.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/083b60f2-11f5-4269-8467-bfef4a03334f/@@download/cross_correlation_plot/ENCFF000YOU-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWJ ENCFF000YOU Illumina Genome Analyzer 2016-12-13T03:04:10.792371+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zy2803692pJ09J76g60Bj ENCSR000FAD https://www.encodeproject.org/experiments/ENCSR000FAD transcription factor RAD21-human K562 immortalized cell line sherman-weissman ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000FAU https://www.encodeproject.org/experiments/ENCSR000FAU transcription factor STAT1-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF089XMI https://www.encodeproject.org/files/ENCFF089XMI/@@download/ENCFF089XMI.bam ENCFF719TZE https://www.encodeproject.org/files/ENCFF719TZE/@@download/ENCFF719TZE.bam 19.4 M 0 12.7 M 0.655 SE 27 27 27 0.0 M 7.4 M 7.1 M 0.367 0.97 0.97 34.01 120 1.10 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/de302d65-2883-428c-897d-84dbd9749854/@@download/cross_correlation_plot/ENCFF000YPI-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWR ENCFF000YPI Illumina Genome Analyzer 2016-12-13T03:04:21.270313+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxgQ0369BV55708G9vF9X ENCSR000FAU https://www.encodeproject.org/experiments/ENCSR000FAU transcription factor STAT1-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF263PLG https://www.encodeproject.org/files/ENCFF263PLG/@@download/ENCFF263PLG.bam ENCFF333RBO https://www.encodeproject.org/files/ENCFF333RBO/@@download/ENCFF333RBO.bam 19.4 M 0 10.2 M 0.525 SE 27 27 27 0.0 M 6.0 M 5.9 M 0.301 0.98 0.98 65.44 115 1.11 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/ea3c6739-d0d2-46a6-bd45-558f64a626a5/@@download/cross_correlation_plot/ENCFF000YPJ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWV ENCFF000YPJ Illumina Genome Analyzer 2016-12-13T03:14:09.491946+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zz3003697vfpg2qKbyvjY ENCSR000FAV https://www.encodeproject.org/experiments/ENCSR000FAV transcription factor STAT1-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF403WNR https://www.encodeproject.org/files/ENCFF403WNR/@@download/ENCFF403WNR.bam ENCFF473CUL https://www.encodeproject.org/files/ENCFF473CUL/@@download/ENCFF473CUL.bam 21.2 M 0 12.8 M 0.603 SE 27 27 27 0.0 M 7.2 M 7.1 M 0.336 0.98 0.98 66.24 95 1.04 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/6f63c464-7191-41b6-b7ab-7194b566ec9a/@@download/cross_correlation_plot/ENCFF000YOW-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWE ENCFF000YOW Illumina Genome Analyzer 2016-12-13T03:14:05.058032+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZvJ803697vfpg2qKbyvfQ ENCSR000FAV https://www.encodeproject.org/experiments/ENCSR000FAV transcription factor STAT1-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF463LMJ https://www.encodeproject.org/files/ENCFF463LMJ/@@download/ENCFF463LMJ.bam ENCFF581MWG https://www.encodeproject.org/files/ENCFF581MWG/@@download/ENCFF581MWG.bam 19.0 M 0 11.8 M 0.621 SE 27 27 27 0.0 M 6.9 M 6.8 M 0.355 0.98 0.98 46.92 100 1.10 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/997c6207-2032-4810-93e8-8ca6dba098cc/@@download/cross_correlation_plot/ENCFF000YOY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWL ENCFF000YOY Illumina Genome Analyzer 2016-12-13T03:04:37.564804+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxYj0369BV55708G9vF9J ENCSR000FAT https://www.encodeproject.org/experiments/ENCSR000FAT transcription factor STAT2-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF615CWW https://www.encodeproject.org/files/ENCFF615CWW/@@download/ENCFF615CWW.bam ENCFF469PLV https://www.encodeproject.org/files/ENCFF469PLV/@@download/ENCFF469PLV.bam 8.6 M 0 8.0 M 0.937 SE 27 27 27 0.0 M 5.4 M 5.2 M 0.611 0.97 0.97 36.23 115 1.17 1.53 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9f1e195-0e89-4530-b0ab-8ba7dbc31ead/@@download/cross_correlation_plot/ENCFF000YOX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWM ENCFF000YOX Illumina Genome Analyzer 2016-12-13T02:51:13.851499+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zx7j03698ZxQY8q63XPVv ENCSR000FAT https://www.encodeproject.org/experiments/ENCSR000FAT transcription factor STAT2-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF940QAP https://www.encodeproject.org/files/ENCFF940QAP/@@download/ENCFF940QAP.bam ENCFF811LRS https://www.encodeproject.org/files/ENCFF811LRS/@@download/ENCFF811LRS.bam 17.0 M 0 12.9 M 0.761 SE 27 27 27 0.0 M 7.9 M 7.8 M 0.458 0.99 0.99 84.64 110 1.09 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/1670d42b-5b55-454b-95b7-660e7b7f1c34/@@download/cross_correlation_plot/ENCFF000YOZ-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWF ENCFF000YOZ Illumina Genome Analyzer 2016-12-13T03:13:13.738635+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zy8j03698ZxQY8q63XPYq ENCSR000FBC https://www.encodeproject.org/experiments/ENCSR000FBC transcription factor STAT2-human K562 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF951ITB https://www.encodeproject.org/files/ENCFF951ITB/@@download/ENCFF951ITB.bam ENCFF280WMP https://www.encodeproject.org/files/ENCFF280WMP/@@download/ENCFF280WMP.bam 8.0 M 0 7.3 M 0.911 SE 27 27 27 0.0 M 4.9 M 4.7 M 0.585 0.96 0.96 24.46 125 1.23 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/67610f25-bac1-4774-a605-7ddc151bd706/@@download/cross_correlation_plot/ENCFF000YPH-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWS ENCFF000YPH Illumina Genome Analyzer 2016-12-13T02:55:38.480209+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxgQ03695Kj1j8qPQj0X0 ENCSR000FBC https://www.encodeproject.org/experiments/ENCSR000FBC transcription factor STAT2-human K562 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF876GQO https://www.encodeproject.org/files/ENCFF876GQO/@@download/ENCFF876GQO.bam ENCFF693OEL https://www.encodeproject.org/files/ENCFF693OEL/@@download/ENCFF693OEL.bam 17.7 M 0 11.7 M 0.661 SE 27 27 27 0.0 M 7.3 M 7.2 M 0.407 0.98 0.98 69.30 115 1.17 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/0a1967dc-c91b-4ccf-8c62-1fd059dc9684/@@download/cross_correlation_plot/ENCFF000YPK-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GWQ ENCFF000YPK Illumina Genome Analyzer 2016-12-13T03:14:03.573103+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zyk00369Bxb30J6x5bq6z ENCSR000FAC https://www.encodeproject.org/experiments/ENCSR000FAC transcription factor XRCC4-human K562 immortalized cell line sherman-weissman ENCODE2 pending SE 34 Illumina Genome Analyzer unreviewed ENCSR000FAM https://www.encodeproject.org/experiments/ENCSR000FAM control Control-human NB4 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF354YLD https://www.encodeproject.org/files/ENCFF354YLD/@@download/ENCFF354YLD.bam ENCFF801NQW https://www.encodeproject.org/files/ENCFF801NQW/@@download/ENCFF801NQW.bam 15.4 M 0 11.0 M 0.713 SE 25 25 native 0.0 M 6.2 M 6.0 M 0.393 0.98 0.98 51.27 100 1.03 1.01 https://www.encodeproject.org/chipseq-filter-quality-metrics/21224928-b2d7-4401-b425-3716864ac672/@@download/cross_correlation_plot/ENCFF000ZMO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXO ENCFF000ZMO Illumina Genome Analyzer 2016-10-26T17:35:35.299047+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082PK003699VK2qfkF2Yj4g ENCSR000FAL https://www.encodeproject.org/experiments/ENCSR000FAL transcription factor POLR2A-human NB4 immortalized cell line 1 sherman-weissman ENCODE2 GRCh38 ENCFF815XEK https://www.encodeproject.org/files/ENCFF815XEK/@@download/ENCFF815XEK.bam ENCFF168ZAP https://www.encodeproject.org/files/ENCFF168ZAP/@@download/ENCFF168ZAP.bam 7.1 M 0 6.7 M 0.942 SE 30 25 25 0.0 M 4.7 M 4.2 M 0.588 0.90 0.90 10.16 85 3.68 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/bee84502-dba1-4d51-aa95-f102d75c9db5/@@download/cross_correlation_plot/ENCFF000ZMY-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXP ENCFF000ZMY Illumina Genome Analyzer 2016-12-13T02:51:42.162843+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17ZxVQ03698ZxQY8q63XPXZ ENCSR000FAL https://www.encodeproject.org/experiments/ENCSR000FAL transcription factor POLR2A-human NB4 immortalized cell line 2 sherman-weissman ENCODE2 GRCh38 ENCFF620FNF https://www.encodeproject.org/files/ENCFF620FNF/@@download/ENCFF620FNF.bam ENCFF846GXH https://www.encodeproject.org/files/ENCFF846GXH/@@download/ENCFF846GXH.bam 6.0 M 0 5.7 M 0.943 SE 30 25 25 0.0 M 4.1 M 3.5 M 0.576 0.85 0.83 5.28 95 3.89 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/dd572208-2445-406e-8d9c-e9f180a0ed15/@@download/cross_correlation_plot/ENCFF000ZMX-crop.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB723GXN ENCFF000ZMX Illumina Genome Analyzer 2016-12-13T02:47:01.401257+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F17Zz6803697vfpg2qKbyvjk ENCSR000DNB https://www.encodeproject.org/experiments/ENCSR000DNB control Control-human A549 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF810XBE https://www.encodeproject.org/files/ENCFF810XBE/@@download/ENCFF810XBE.bam ENCFF721CZL https://www.encodeproject.org/files/ENCFF721CZL/@@download/ENCFF721CZL.bam 41.5 M 0 41.2 M 0.993 SE 36 36 native 0.0 M 28.4 M 26.3 M 0.634 0.94 0.94 16.12 100 1.09 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/a32f2803-6a09-4733-9c63-d0140b15435b/@@download/cross_correlation_plot/ENCFF000RMI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB999VGI ENCFF000RMI Illumina Genome Analyzer 2016-10-26T17:39:21.014301+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082GK00369KPb3j15B4p8pX ENCSR000DNA https://www.encodeproject.org/experiments/ENCSR000DNA "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF663XYQ https://www.encodeproject.org/files/ENCFF663XYQ/@@download/ENCFF663XYQ.bam ENCFF868ENW https://www.encodeproject.org/files/ENCFF868ENW/@@download/ENCFF868ENW.bam 40.0 M 0 39.0 M 0.975 SE 36 36 native 0.0 M 27.3 M 22.0 M 0.552 0.82 0.86 9.03 110 2.47 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/352d6db8-cc9f-4200-a2a6-53d9bc292a17/@@download/cross_correlation_plot/ENCFF000RMB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB217VKC ENCFF000RMB Illumina Genome Analyzer 2016-12-11T04:30:49.017484+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165K8003697xKX68qyy2kQ8 ENCSR000DNA https://www.encodeproject.org/experiments/ENCSR000DNA "transcription factor,RNA binding protein" CTCF-human A549 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF664APT https://www.encodeproject.org/files/ENCFF664APT/@@download/ENCFF664APT.bam ENCFF037DQK https://www.encodeproject.org/files/ENCFF037DQK/@@download/ENCFF037DQK.bam 40.8 M 0 40.0 M 0.981 SE 36 36 native 0.0 M 29.9 M 22.6 M 0.553 0.77 0.84 8.21 110 2.85 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/c21cf5a7-70ff-4b0b-8375-05843a86d5fa/@@download/cross_correlation_plot/ENCFF000RMC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB331DVU ENCFF000RMC Illumina Genome Analyzer 2016-12-11T04:30:27.339090+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165KGj03692yykb1zBpz7x7 ENCSR000DMZ https://www.encodeproject.org/experiments/ENCSR000DMZ transcription factor POLR2A-human A549 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF223EHQ https://www.encodeproject.org/files/ENCFF223EHQ/@@download/ENCFF223EHQ.bam ENCFF984VJJ https://www.encodeproject.org/files/ENCFF984VJJ/@@download/ENCFF984VJJ.bam 40.2 M 0 38.1 M 0.947 SE 36 36 native 0.0 M 25.6 M 23.3 M 0.579 0.92 0.92 13.14 105 1.32 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/1816088e-e904-4613-8baa-a5b37ee6f68c/@@download/cross_correlation_plot/ENCFF000RMM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB766OHC ENCFF000RMM Illumina Genome Analyzer 2016-12-03T15:32:50.904591+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FKYj0369B1Y4p7bPVBG10 ENCSR000DMZ https://www.encodeproject.org/experiments/ENCSR000DMZ transcription factor POLR2A-human A549 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF565TWZ https://www.encodeproject.org/files/ENCFF565TWZ/@@download/ENCFF565TWZ.bam ENCFF697JDL https://www.encodeproject.org/files/ENCFF697JDL/@@download/ENCFF697JDL.bam 35.4 M 0 33.3 M 0.940 SE 36 36 native 0.0 M 22.8 M 20.1 M 0.567 0.88 0.90 10.45 115 1.43 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d24f61a-125e-40ff-bb03-d68aea702c36/@@download/cross_correlation_plot/ENCFF000RMO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB560DWT ENCFF000RMO Illumina Genome Analyzer 2016-12-03T15:33:10.551993+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FKvj03694Bg03KFY5V9GZ ENCSR685MHU https://www.encodeproject.org/experiments/ENCSR685MHU control Control-human CD14-positive monocyte primary cell 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF993PWU https://www.encodeproject.org/files/ENCFF993PWU/@@download/ENCFF993PWU.bam ENCFF970OKV https://www.encodeproject.org/files/ENCFF970OKV/@@download/ENCFF970OKV.bam 31.5 M 0 31.2 M 0.990 SE 36 36 native 0.0 M 20.6 M 20.3 M 0.645 0.99 0.99 72.09 115 1.13 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/df951195-2353-4fbe-9f11-2b052d0295a6/@@download/cross_correlation_plot/ENCFF000SCP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB143FQC ENCFF000SCP Illumina Genome Analyzer 2016-10-26T17:35:43.178774+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Z0Q0369PK6yVbxF59b1V ENCSR116HGL https://www.encodeproject.org/experiments/ENCSR116HGL control Control-human colon tissue vishwanath-iyer ENCODE2 pending SE 51 Illumina Genome Analyzer unreviewed ENCSR000DLX https://www.encodeproject.org/experiments/ENCSR000DLX control Control-human endothelial cell of umbilical vein primary cell vishwanath-iyer ENCODE2 pending SE 36 Illumina Genome Analyzer pipeline completed ENCSR000DLW https://www.encodeproject.org/experiments/ENCSR000DLW "transcription factor,RNA binding protein" CTCF-human endothelial cell of umbilical vein primary cell vishwanath-iyer ENCODE2 pending SE 35 Illumina Genome Analyzer unreviewed ENCSR000DLU https://www.encodeproject.org/experiments/ENCSR000DLU transcription factor MYC-human endothelial cell of umbilical vein primary cell 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF997MKZ https://www.encodeproject.org/files/ENCFF997MKZ/@@download/ENCFF997MKZ.bam ENCFF838YUD https://www.encodeproject.org/files/ENCFF838YUD/@@download/ENCFF838YUD.bam 28.0 M 0 16.2 M 0.579 SE 36 36 native 0.0 M 11.1 M 9.6 M 0.343 0.89 0.89 9.58 70 1.35 1.28 https://www.encodeproject.org/chipseq-filter-quality-metrics/1dcee596-f264-47fd-b4f9-c044a3a64cf8/@@download/cross_correlation_plot/ENCFF000RVF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB348YXS ENCFF000RVF Illumina Genome Analyzer 2016-12-03T15:32:29.941538+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FKF80369JgpfJ7bkvB829 ENCSR000DLV https://www.encodeproject.org/experiments/ENCSR000DLV transcription factor POLR2A-human endothelial cell of umbilical vein primary cell 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF820CYE https://www.encodeproject.org/files/ENCFF820CYE/@@download/ENCFF820CYE.bam ENCFF612VJH https://www.encodeproject.org/files/ENCFF612VJH/@@download/ENCFF612VJH.bam 14.1 M 0 13.2 M 0.933 SE 35 35 native 0.0 M 10.5 M 3.9 M 0.273 0.37 0.30 1.20 85 3.45 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/02986e55-ac0f-4015-bf90-3b5f78428435/@@download/cross_correlation_plot/ENCFF000RVR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB024YUW ENCFF000RVR Illumina Genome Analyzer 2016-12-03T15:32:46.430165+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F9Kj0369GbFGGFvGxbjYg ENCSR000DLV https://www.encodeproject.org/experiments/ENCSR000DLV transcription factor POLR2A-human endothelial cell of umbilical vein primary cell 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF665LFS https://www.encodeproject.org/files/ENCFF665LFS/@@download/ENCFF665LFS.bam ENCFF260SNF https://www.encodeproject.org/files/ENCFF260SNF/@@download/ENCFF260SNF.bam 16.5 M 0 15.3 M 0.925 SE 35 35 native 0.0 M 12.4 M 8.4 M 0.505 0.67 0.65 2.61 95 1.85 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/9bd7af92-719a-43b1-91dd-d08e3171394f/@@download/cross_correlation_plot/ENCFF000RVW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB565RGP ENCFF000RVW Illumina Genome Analyzer 2016-12-03T15:32:49.222708+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F9ZQ0369JGQJy89KX6gq0 ENCSR000DKQ https://www.encodeproject.org/experiments/ENCSR000DKQ control Control-human GM10248 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF812UUO https://www.encodeproject.org/files/ENCFF812UUO/@@download/ENCFF812UUO.bam ENCFF552LHI https://www.encodeproject.org/files/ENCFF552LHI/@@download/ENCFF552LHI.bam 9.9 M 0 4.4 M 0.443 SE 51 51 native 0.0 M 3.4 M 3.3 M 0.333 0.98 0.99 72.63 65 1.33 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1e83c5a-6631-4025-b5ed-6e35dedced30/@@download/cross_correlation_plot/ENCFF000ROO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB606KKN ENCFF000ROO Illumina Genome Analyzer 2016-12-03T15:30:55.302973+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10GKX00369JGQJy89KX6gz8 ENCSR000DKP https://www.encodeproject.org/experiments/ENCSR000DKP "transcription factor,RNA binding protein" CTCF-human GM10248 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF107SFO https://www.encodeproject.org/files/ENCFF107SFO/@@download/ENCFF107SFO.bam ENCFF261WFK https://www.encodeproject.org/files/ENCFF261WFK/@@download/ENCFF261WFK.bam 43.9 M 0 19.5 M 0.443 SE 51 51 native 0.0 M 15.3 M 12.6 M 0.287 0.85 0.85 6.66 115 1.74 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/05e1e96e-04e9-4e71-b099-c610449cc0eb/@@download/cross_correlation_plot/ENCFF000ROI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB689ALZ ENCFF000ROI Illumina Genome Analyzer 2017-04-09T04:29:03.705962+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkVK803696Kzj887bG0J1q ENCSR000DKP https://www.encodeproject.org/experiments/ENCSR000DKP "transcription factor,RNA binding protein" CTCF-human GM10248 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF505IMK https://www.encodeproject.org/files/ENCFF505IMK/@@download/ENCFF505IMK.bam ENCFF191UVC https://www.encodeproject.org/files/ENCFF191UVC/@@download/ENCFF191UVC.bam 12.2 M 0 10.0 M 0.821 SE 51 51 native 0.0 M 8.2 M 7.4 M 0.607 0.91 0.92 11.99 110 3.22 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/c8feecfe-4e07-42ab-a4f8-7f2af244c78f/@@download/cross_correlation_plot/ENCFF000RNU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB579TDS ENCFF000RNU Illumina Genome Analyzer 2017-04-09T03:13:01.689215+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkVXQ0369PxPbXFXB9vy65 ENCSR000DKS https://www.encodeproject.org/experiments/ENCSR000DKS control Control-human GM10266 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF080BAM https://www.encodeproject.org/files/ENCFF080BAM/@@download/ENCFF080BAM.bam ENCFF569KIG https://www.encodeproject.org/files/ENCFF569KIG/@@download/ENCFF569KIG.bam 18.3 M 0 8.5 M 0.464 SE 51 51 native 0.0 M 6.5 M 6.3 M 0.346 0.98 0.98 46.01 70 1.20 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/4cc9dfae-20fc-4ed0-911b-613802e2efe5/@@download/cross_correlation_plot/ENCFF000RPT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB942IDU ENCFF000RPT Illumina Genome Analyzer 2016-12-03T15:31:45.740486+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FQ380369G08qP7bbvf7xp ENCSR000DKR https://www.encodeproject.org/experiments/ENCSR000DKR "transcription factor,RNA binding protein" CTCF-human GM10266 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF779BHG https://www.encodeproject.org/files/ENCFF779BHG/@@download/ENCFF779BHG.bam ENCFF861CNC https://www.encodeproject.org/files/ENCFF861CNC/@@download/ENCFF861CNC.bam 31.5 M 0 27.0 M 0.859 SE 51 51 native 0.0 M 22.3 M 18.7 M 0.593 0.86 0.87 8.44 115 2.28 1.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/4ce73bfb-6fb8-4f00-9b6d-fa36434cd1b0/@@download/cross_correlation_plot/ENCFF000ROC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB271JKR ENCFF000ROC Illumina Genome Analyzer 2017-04-09T03:54:03.706373+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkVg80369P1457FX3ZP4Yk ENCSR000DKR https://www.encodeproject.org/experiments/ENCSR000DKR "transcription factor,RNA binding protein" CTCF-human GM10266 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF686DDV https://www.encodeproject.org/files/ENCFF686DDV/@@download/ENCFF686DDV.bam ENCFF506MFX https://www.encodeproject.org/files/ENCFF506MFX/@@download/ENCFF506MFX.bam 19.6 M 0 16.2 M 0.825 SE 51 51 native 0.0 M 13.1 M 11.3 M 0.578 0.88 0.87 7.30 145 1.75 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/faade680-9273-4a50-80c6-93b6b614eb8e/@@download/cross_correlation_plot/ENCFF000ROA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB987DXY ENCFF000ROA Illumina Genome Analyzer 2017-04-09T03:40:23.744614+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkVv00369PbVgfFXv6pQFf ENCSR000DKW https://www.encodeproject.org/experiments/ENCSR000DKW control Control-human GM12878 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF077ATA https://www.encodeproject.org/files/ENCFF077ATA/@@download/ENCFF077ATA.bam ENCFF798AWR https://www.encodeproject.org/files/ENCFF798AWR/@@download/ENCFF798AWR.bam 17.0 M 0 16.6 M 0.978 SE 33 33 native 0.0 M 12.2 M 11.4 M 0.671 0.94 0.93 15.27 80 1.03 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ec23cdb-8fbb-4048-9ef7-ca663daa477d/@@download/cross_correlation_plot/ENCFF000RPB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB203EHS ENCFF000RPB Illumina Genome Analyzer II 2016-10-26T17:35:19.958033+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Y8j0369BgF5f15PFF2Z6 ENCSR356PFJ https://www.encodeproject.org/experiments/ENCSR356PFJ control Control-human GM12878 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF822PGS https://www.encodeproject.org/files/ENCFF822PGS/@@download/ENCFF822PGS.bam ENCFF906CFS https://www.encodeproject.org/files/ENCFF906CFS/@@download/ENCFF906CFS.bam 17.0 M 0 16.6 M 0.978 SE 33 33 native 0.0 M 12.2 M 11.4 M 0.671 0.94 0.93 15.27 80 1.03 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/21bec1b3-2a5a-4a8f-8dbc-bc0792abcddd/@@download/cross_correlation_plot/ENCFF586VHJ-ENCFF660RGN_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf "ENCLB242AEE,ENCLB638QML" "ENCFF586VHJ,ENCFF660RGN" Illumina Genome Analyzer 2016-10-26T17:35:34.585682+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082Pg80369KPb3j15B4p8x8 ENCSR000DKV https://www.encodeproject.org/experiments/ENCSR000DKV "transcription factor,RNA binding protein" CTCF-human GM12878 immortalized cell line vishwanath-iyer ENCODE2 pending SE "33,35" Illumina Genome Analyzer unreviewed ENCSR000DKU https://www.encodeproject.org/experiments/ENCSR000DKU transcription factor MYC-human GM12878 immortalized cell line vishwanath-iyer ENCODE2 pending SE "36,35" Illumina Genome Analyzer unreviewed ENCSR000DKT https://www.encodeproject.org/experiments/ENCSR000DKT transcription factor POLR2A-human GM12878 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF173NYU https://www.encodeproject.org/files/ENCFF173NYU/@@download/ENCFF173NYU.bam ENCFF960TLC https://www.encodeproject.org/files/ENCFF960TLC/@@download/ENCFF960TLC.bam 23.2 M 0 21.4 M 0.924 SE 33 33 native 0.0 M 14.1 M 6.8 M 0.294 0.48 0.46 1.74 150 1.08 2.20 https://www.encodeproject.org/chipseq-filter-quality-metrics/306e3706-9444-4f8f-a26a-f1f81b041d76/@@download/cross_correlation_plot/ENCFF000RPI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB626SSY ENCFF000RPI Illumina Genome Analyzer 2016-12-03T15:33:19.279030+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F8yQ03699Z0qKPB8J542q ENCSR000DKT https://www.encodeproject.org/experiments/ENCSR000DKT transcription factor POLR2A-human GM12878 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF430LDQ https://www.encodeproject.org/files/ENCFF430LDQ/@@download/ENCFF430LDQ.bam ENCFF463PMP https://www.encodeproject.org/files/ENCFF463PMP/@@download/ENCFF463PMP.bam 17.8 M 0 17.1 M 0.961 SE 36 36 native 0.0 M 13.2 M 11.8 M 0.665 0.91 0.92 12.67 85 1.53 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/16f6d593-144d-4baf-bde4-f576b003f63a/@@download/cross_correlation_plot/ENCFF000RPL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB980LBL ENCFF000RPL Illumina Genome Analyzer 2016-12-03T15:33:10.775174+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F95003691j56kKjZ6Jkx0 ENCSR000DKX https://www.encodeproject.org/experiments/ENCSR000DKX "transcription factor,RNA binding protein" CTCF-human GM12891 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF936ROK https://www.encodeproject.org/files/ENCFF936ROK/@@download/ENCFF936ROK.bam ENCFF264POZ https://www.encodeproject.org/files/ENCFF264POZ/@@download/ENCFF264POZ.bam 13.8 M 0 13.3 M 0.963 SE 36 36 native 0.0 M 9.7 M 7.2 M 0.520 0.78 0.83 7.27 95 5.99 1.80 https://www.encodeproject.org/chipseq-filter-quality-metrics/456d1780-f75f-4052-bc3d-61478605fd27/@@download/cross_correlation_plot/ENCFF000RPR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB698EUA ENCFF000RPR Illumina Genome Analyzer 2017-04-09T03:19:17.741281+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkX10036946P3GFVpGzzXJ ENCSR000DKX https://www.encodeproject.org/experiments/ENCSR000DKX "transcription factor,RNA binding protein" CTCF-human GM12891 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF529DPT https://www.encodeproject.org/files/ENCFF529DPT/@@download/ENCFF529DPT.bam ENCFF064HFL https://www.encodeproject.org/files/ENCFF064HFL/@@download/ENCFF064HFL.bam 16.5 M 0 16.0 M 0.971 SE 36 36 native 0.0 M 11.9 M 8.8 M 0.533 0.78 0.83 7.27 105 5.56 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/6e8d1f69-3e26-4a55-a37e-03da6e8c0e26/@@download/cross_correlation_plot/ENCFF000RPS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB142MXX ENCFF000RPS Illumina Genome Analyzer 2017-04-09T03:20:41.101251+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkX580369P1457FX3ZP4Z2 ENCSR000DKY https://www.encodeproject.org/experiments/ENCSR000DKY "transcription factor,RNA binding protein" CTCF-human GM12892 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF581NBE https://www.encodeproject.org/files/ENCFF581NBE/@@download/ENCFF581NBE.bam ENCFF384RTN https://www.encodeproject.org/files/ENCFF384RTN/@@download/ENCFF384RTN.bam 28.0 M 0 26.9 M 0.963 SE 36 36 native 0.0 M 20.4 M 16.0 M 0.571 0.81 0.87 11.05 115 3.44 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/ebd12b67-e7d3-4a61-99c0-458a2f44a7c8/@@download/cross_correlation_plot/ENCFF000RQB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB724SGU ENCFF000RQB Illumina Genome Analyzer 2017-04-09T03:50:17.785440+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkXB003694V7J4FXQ7yGBv ENCSR000DKY https://www.encodeproject.org/experiments/ENCSR000DKY "transcription factor,RNA binding protein" CTCF-human GM12892 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF445RHN https://www.encodeproject.org/files/ENCFF445RHN/@@download/ENCFF445RHN.bam ENCFF809XWT https://www.encodeproject.org/files/ENCFF809XWT/@@download/ENCFF809XWT.bam 16.9 M 0 16.0 M 0.946 SE 36 36 native 0.0 M 12.5 M 9.8 M 0.578 0.82 0.86 9.66 110 5.39 2.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/c87a6096-0d87-4c91-9a38-88cd8055be5c/@@download/cross_correlation_plot/ENCFF000RQA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB067GPN ENCFF000RQA Illumina Genome Analyzer 2017-04-09T03:39:34.827476+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkXK80369PxPbXFXB9vy6J ENCSR000DLA https://www.encodeproject.org/experiments/ENCSR000DLA control Control-human GM13976 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF467KFW https://www.encodeproject.org/files/ENCFF467KFW/@@download/ENCFF467KFW.bam ENCFF167MFG https://www.encodeproject.org/files/ENCFF167MFG/@@download/ENCFF167MFG.bam 8.8 M 0 3.4 M 0.384 SE 51 51 native 0.0 M 2.6 M 2.4 M 0.276 0.94 0.94 16.67 145 1.18 0.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/60f9600f-958d-4698-87fb-14923aa4a6f2/@@download/cross_correlation_plot/ENCFF000RQY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB047AJT ENCFF000RQY Illumina Genome Analyzer 2016-12-03T15:31:05.665916+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FV1j0369JgpfJ7bkvB849 ENCSR000DKZ https://www.encodeproject.org/experiments/ENCSR000DKZ "transcription factor,RNA binding protein" CTCF-human GM13976 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF271LZR https://www.encodeproject.org/files/ENCFF271LZR/@@download/ENCFF271LZR.bam ENCFF637EYF https://www.encodeproject.org/files/ENCFF637EYF/@@download/ENCFF637EYF.bam 14.5 M 0 12.3 M 0.849 SE 51 51 native 0.0 M 10.1 M 8.8 M 0.609 0.89 0.89 9.43 105 2.96 2.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/97a6a923-adfb-4399-86f4-d95c944408fe/@@download/cross_correlation_plot/ENCFF000RQF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB504WEH ENCFF000RQF Illumina Genome Analyzer 2016-12-03T15:31:03.330709+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10GKjj03694XQv5PY1yjYP3 ENCSR000DKZ https://www.encodeproject.org/experiments/ENCSR000DKZ "transcription factor,RNA binding protein" CTCF-human GM13976 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF651CKC https://www.encodeproject.org/files/ENCFF651CKC/@@download/ENCFF651CKC.bam ENCFF890UFY https://www.encodeproject.org/files/ENCFF890UFY/@@download/ENCFF890UFY.bam 10.9 M 0 9.0 M 0.825 SE 51 51 native 0.0 M 7.3 M 6.7 M 0.615 0.93 0.93 14.22 130 2.04 3.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/fe2b2982-5d5c-4f62-a4b6-c9cebd6c3f19/@@download/cross_correlation_plot/ENCFF000RQK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB886CDE ENCFF000RQK Illumina Genome Analyzer 2016-12-03T15:30:50.738956+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10GKz803690BpxKFqq19b0b ENCSR000DLC https://www.encodeproject.org/experiments/ENCSR000DLC control Control-human GM13977 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF353CVX https://www.encodeproject.org/files/ENCFF353CVX/@@download/ENCFF353CVX.bam 34.9 M 0 18.7 M 0.534 SE 51 51 native 0.0 M 14.3 M 13.7 M 0.392 0.96 0.97 29.01 130 1.13 2.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/647b110d-8d69-438e-89cc-ab1043098402/@@download/cross_correlation_plot/ENCFF000RRV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB291GBF ENCFF000RRV Illumina Genome Analyzer 2017-04-11T21:19:56.295942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B0y180369F00q32BFF7bpF ENCSR000DLB https://www.encodeproject.org/experiments/ENCSR000DLB "transcription factor,RNA binding protein" CTCF-human GM13977 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF068ETE https://www.encodeproject.org/files/ENCFF068ETE/@@download/ENCFF068ETE.bam ENCFF816TEP https://www.encodeproject.org/files/ENCFF816TEP/@@download/ENCFF816TEP.bam 14.9 M 0 11.6 M 0.781 SE 51 51 native 0.0 M 9.6 M 8.4 M 0.563 0.89 0.89 9.26 105 3.69 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/91cb1caa-2178-477d-9e8b-3e0c40480619/@@download/cross_correlation_plot/ENCFF000RQN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB187REE ENCFF000RQN Illumina Genome Analyzer 2017-04-11T18:58:19.641361+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B0xJQ0369FP2fv6GY819Q3 ENCSR000DLB https://www.encodeproject.org/experiments/ENCSR000DLB "transcription factor,RNA binding protein" CTCF-human GM13977 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF418UZJ https://www.encodeproject.org/files/ENCFF418UZJ/@@download/ENCFF418UZJ.bam ENCFF801NXU https://www.encodeproject.org/files/ENCFF801NXU/@@download/ENCFF801NXU.bam 26.9 M 0 22.6 M 0.843 SE 51 51 native 0.0 M 18.9 M 16.3 M 0.606 0.88 0.89 9.67 115 2.57 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/45d92fb1-e729-4a1a-892b-31d0dd75c351/@@download/cross_correlation_plot/ENCFF000RQS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB156AFM ENCFF000RQS Illumina Genome Analyzer 2017-04-11T18:58:25.362389+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B0xf00369FP2fv6GY819Qg ENCSR000DLD https://www.encodeproject.org/experiments/ENCSR000DLD "transcription factor,RNA binding protein" CTCF-human GM19238 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF634WVQ https://www.encodeproject.org/files/ENCFF634WVQ/@@download/ENCFF634WVQ.bam ENCFF190MKA https://www.encodeproject.org/files/ENCFF190MKA/@@download/ENCFF190MKA.bam 16.4 M 0 15.9 M 0.973 SE 36 36 native 0.0 M 12.4 M 9.6 M 0.585 0.80 0.86 9.72 115 6.65 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/3266f4e3-5474-4b52-a0f8-e641263f41f9/@@download/cross_correlation_plot/ENCFF000RQV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB008YYR ENCFF000RQV Illumina Genome Analyzer II 2016-12-03T15:31:58.936805+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FQG00369B1Y4p7bPVBG2K ENCSR000DLD https://www.encodeproject.org/experiments/ENCSR000DLD "transcription factor,RNA binding protein" CTCF-human GM19238 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF193VTB https://www.encodeproject.org/files/ENCFF193VTB/@@download/ENCFF193VTB.bam ENCFF077FTM https://www.encodeproject.org/files/ENCFF077FTM/@@download/ENCFF077FTM.bam 16.0 M 0 15.6 M 0.972 SE 36 36 native 0.0 M 11.9 M 9.5 M 0.594 0.83 0.87 10.02 105 6.19 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/e982d6cd-9759-41e2-a4d1-3f08246e0d37/@@download/cross_correlation_plot/ENCFF000RQW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB490ZNE ENCFF000RQW Illumina Genome Analyzer II 2016-12-03T15:31:46.180135+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FQY803697Q2587b9p458g ENCSR000DLE https://www.encodeproject.org/experiments/ENCSR000DLE "transcription factor,RNA binding protein" CTCF-human GM19239 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF324IXO https://www.encodeproject.org/files/ENCFF324IXO/@@download/ENCFF324IXO.bam ENCFF818NSV https://www.encodeproject.org/files/ENCFF818NSV/@@download/ENCFF818NSV.bam 21.9 M 0 20.8 M 0.951 SE 36 36 native 0.0 M 15.5 M 13.1 M 0.598 0.88 0.91 15.31 100 3.40 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/8bd5f706-20b8-430b-8dc6-eeef153c815c/@@download/cross_correlation_plot/ENCFF000RRI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB052VKH ENCFF000RRI Illumina Genome Analyzer II 2017-04-09T03:42:24.173368+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkXx8036946P3GFVpGzzXj ENCSR000DLE https://www.encodeproject.org/experiments/ENCSR000DLE "transcription factor,RNA binding protein" CTCF-human GM19239 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF646HRE https://www.encodeproject.org/files/ENCFF646HRE/@@download/ENCFF646HRE.bam ENCFF229WYE https://www.encodeproject.org/files/ENCFF229WYE/@@download/ENCFF229WYE.bam 4.7 M 0 4.3 M 0.924 SE 36 36 native 0.0 M 3.3 M 3.1 M 0.660 0.95 0.96 25.38 105 8.83 2.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ebdf257-6d2c-481b-a069-6cdc53656a44/@@download/cross_correlation_plot/ENCFF000RRD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB674ULI ENCFF000RRD Illumina Genome Analyzer II 2017-04-09T03:13:42.969245+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkY1Q0369PxPbXFXB9vy6v ENCSR000DLF https://www.encodeproject.org/experiments/ENCSR000DLF "transcription factor,RNA binding protein" CTCF-human GM19240 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF675NTQ https://www.encodeproject.org/files/ENCFF675NTQ/@@download/ENCFF675NTQ.bam ENCFF453GKH https://www.encodeproject.org/files/ENCFF453GKH/@@download/ENCFF453GKH.bam 15.6 M 0 15.2 M 0.974 SE 36 36 native 0.0 M 11.5 M 8.4 M 0.538 0.77 0.84 8.61 95 6.89 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/597ba0a8-990b-4abb-92da-0466c6aca87f/@@download/cross_correlation_plot/ENCFF000RRK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB492WSV ENCFF000RRK Illumina Genome Analyzer II 2017-04-09T03:39:27.177948+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkY680369PxPbXFXB9vy75 ENCSR000DLF https://www.encodeproject.org/experiments/ENCSR000DLF "transcription factor,RNA binding protein" CTCF-human GM19240 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF725ABU https://www.encodeproject.org/files/ENCFF725ABU/@@download/ENCFF725ABU.bam ENCFF314EMW https://www.encodeproject.org/files/ENCFF314EMW/@@download/ENCFF314EMW.bam 17.8 M 0 17.5 M 0.986 SE 36 36 native 0.0 M 13.3 M 8.5 M 0.481 0.66 0.68 3.11 105 5.99 2.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/89a5e968-c480-4269-accb-1434fe9630e1/@@download/cross_correlation_plot/ENCFF000RRN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB420UXF ENCFF000RRN Illumina Genome Analyzer II 2017-04-09T03:39:30.316858+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkYBj03699Jk91FXj33QYy ENCSR000DLH https://www.encodeproject.org/experiments/ENCSR000DLH control Control-human GM20000 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF515AXB https://www.encodeproject.org/files/ENCFF515AXB/@@download/ENCFF515AXB.bam 31.4 M 0 15.1 M 0.480 SE 51 51 native 0.0 M 11.5 M 10.9 M 0.346 0.95 0.96 23.54 130 1.14 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/8df1ef46-3825-44d1-a0d7-b35f6cb791b0/@@download/cross_correlation_plot/ENCFF000RTH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB354KKK ENCFF000RTH Illumina Genome Analyzer 2017-04-09T18:02:56.251701+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B0x3Q03697QpY56J2qQb61 ENCSR000DLG https://www.encodeproject.org/experiments/ENCSR000DLG "transcription factor,RNA binding protein" CTCF-human GM20000 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF875VWC https://www.encodeproject.org/files/ENCFF875VWC/@@download/ENCFF875VWC.bam ENCFF822LAZ https://www.encodeproject.org/files/ENCFF822LAZ/@@download/ENCFF822LAZ.bam 10.5 M 0 9.3 M 0.882 SE 51 51 native 0.0 M 7.5 M 6.8 M 0.649 0.92 0.92 12.21 125 2.48 4.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/96c06447-1945-482c-88ee-7d5bdf9c44e6/@@download/cross_correlation_plot/ENCFF000RRR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB067PGA ENCFF000RRR Illumina Genome Analyzer 2017-04-09T03:27:25.059503+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkYPj0369P1457FX3ZP4Zy ENCSR000DLG https://www.encodeproject.org/experiments/ENCSR000DLG "transcription factor,RNA binding protein" CTCF-human GM20000 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF903YUY https://www.encodeproject.org/files/ENCFF903YUY/@@download/ENCFF903YUY.bam ENCFF281FKY https://www.encodeproject.org/files/ENCFF281FKY/@@download/ENCFF281FKY.bam 14.1 M 0 10.2 M 0.728 SE 51 51 native 0.0 M 8.3 M 7.1 M 0.506 0.89 0.88 7.54 145 2.12 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/68ba9955-905e-4d83-9262-ba68b6df4a13/@@download/cross_correlation_plot/ENCFF000RRS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB677PYM ENCFF000RRS Illumina Genome Analyzer 2017-04-09T03:39:54.315907+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkYZ803699Jk91FXj33QZ7 ENCSR704AQC https://www.encodeproject.org/experiments/ENCSR704AQC control Control-human H1-hESC stem cell 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF381ASB https://www.encodeproject.org/files/ENCFF381ASB/@@download/ENCFF381ASB.bam ENCFF828BJB https://www.encodeproject.org/files/ENCFF828BJB/@@download/ENCFF828BJB.bam 7.7 M 0 7.5 M 0.973 SE 36 36 native 0.0 M 4.8 M 4.2 M 0.548 0.91 0.91 11.23 105 1.42 2.62 https://www.encodeproject.org/chipseq-filter-quality-metrics/1443b0d8-0e31-4d19-83af-24e1cfff6bff/@@download/cross_correlation_plot/ENCFF795IME.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB920FDD ENCFF795IME Illumina Genome Analyzer 2016-10-26T17:35:23.521047+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082XF003698F1qV3kBFq38p ENCSR704AQC https://www.encodeproject.org/experiments/ENCSR704AQC control Control-human H1-hESC stem cell 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF047RYQ https://www.encodeproject.org/files/ENCFF047RYQ/@@download/ENCFF047RYQ.bam ENCFF367KJP https://www.encodeproject.org/files/ENCFF367KJP/@@download/ENCFF367KJP.bam 14.5 M 0 14.4 M 0.990 SE 36 36 native 0.0 M 9.3 M 7.6 M 0.522 0.84 0.84 6.14 110 1.34 3.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/69830dbf-0b2e-4249-ade0-f440852eaeee/@@download/cross_correlation_plot/ENCFF963LOW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB447OZO ENCFF963LOW Illumina Genome Analyzer 2016-10-26T17:35:45.126079+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082XQQ0369GK9p461P313KZ ENCSR000DLK https://www.encodeproject.org/experiments/ENCSR000DLK "transcription factor,RNA binding protein" CTCF-human H1-hESC stem cell 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF135DRQ https://www.encodeproject.org/files/ENCFF135DRQ/@@download/ENCFF135DRQ.bam ENCFF148GTR https://www.encodeproject.org/files/ENCFF148GTR/@@download/ENCFF148GTR.bam 15.0 M 0 14.6 M 0.976 SE 36 36 native 0.0 M 10.5 M 9.0 M 0.601 0.88 0.91 13.59 90 5.60 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec332b97-627f-4ba1-87d2-13dce67213ea/@@download/cross_correlation_plot/ENCFF000RSJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB142XUU ENCFF000RSJ Illumina Genome Analyzer 2017-04-21T05:02:01.754176+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3vj7P80369B55Zq0v8qbJJB ENCSR000DLI https://www.encodeproject.org/experiments/ENCSR000DLI transcription factor MYC-human H1-hESC stem cell 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF649OHT https://www.encodeproject.org/files/ENCFF649OHT/@@download/ENCFF649OHT.bam ENCFF233CQT https://www.encodeproject.org/files/ENCFF233CQT/@@download/ENCFF233CQT.bam 29.3 M 0 19.1 M 0.651 SE 36 36 native 0.0 M 12.4 M 5.3 M 0.180 0.44 0.55 2.50 100 1.38 6.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/342009d5-e153-4f86-b534-7d9b7d213ed6/@@download/cross_correlation_plot/ENCFF000RSE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB136SRA ENCFF000RSE Illumina Genome Analyzer 2017-04-21T05:19:51.174196+00:00 released pipeline error https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3vjGVQ03694Yj9J0v271yVJ ENCSR000DLJ https://www.encodeproject.org/experiments/ENCSR000DLJ transcription factor POLR2A-human H1-hESC stem cell 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF916RTG https://www.encodeproject.org/files/ENCFF916RTG/@@download/ENCFF916RTG.bam ENCFF808DQN https://www.encodeproject.org/files/ENCFF808DQN/@@download/ENCFF808DQN.bam 23.2 M 0 22.1 M 0.953 SE 36 36 native 0.0 M 16.9 M 15.0 M 0.644 0.90 0.90 10.45 75 1.35 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/3300478c-0dd6-4d0b-8ebc-299f438e1d0d/@@download/cross_correlation_plot/ENCFF000RSM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB889VZX ENCFF000RSM Illumina Genome Analyzer 2016-12-03T15:33:20.936569+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FK2803694Bg03KFY5V9G7 ENCSR000DKO https://www.encodeproject.org/experiments/ENCSR000DKO control Control-human H54 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF509KAJ https://www.encodeproject.org/files/ENCFF509KAJ/@@download/ENCFF509KAJ.bam ENCFF800KVT https://www.encodeproject.org/files/ENCFF800KVT/@@download/ENCFF800KVT.bam 53.0 M 0 52.6 M 0.993 SE 36 36 native 0.0 M 37.6 M 34.3 M 0.648 0.92 0.92 13.12 115 1.07 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf265eb9-0be2-4345-9e80-611b7b958e64/@@download/cross_correlation_plot/ENCFF000RNI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB510VRA ENCFF000RNI Illumina Genome Analyzer 2016-10-26T17:43:55.622161+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0829q003695140QP5B2vfgb ENCSR000DKN https://www.encodeproject.org/experiments/ENCSR000DKN "transcription factor,RNA binding protein" CTCF-human H54 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF526MVX https://www.encodeproject.org/files/ENCFF526MVX/@@download/ENCFF526MVX.bam ENCFF717OLZ https://www.encodeproject.org/files/ENCFF717OLZ/@@download/ENCFF717OLZ.bam 58.2 M 0 55.5 M 0.953 SE 36 36 native 0.0 M 43.1 M 26.7 M 0.458 0.65 0.71 3.96 115 2.70 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/944b5acf-7401-41eb-8f31-6da30ff889e7/@@download/cross_correlation_plot/ENCFF000RNB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB605WML ENCFF000RNB Illumina Genome Analyzer 2016-12-10T21:40:53.039245+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162vk803695F8Bk64ff0708 ENCSR000DKN https://www.encodeproject.org/experiments/ENCSR000DKN "transcription factor,RNA binding protein" CTCF-human H54 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF472PUP https://www.encodeproject.org/files/ENCFF472PUP/@@download/ENCFF472PUP.bam ENCFF533OAE https://www.encodeproject.org/files/ENCFF533OAE/@@download/ENCFF533OAE.bam 54.2 M 0 50.8 M 0.938 SE 36 36 native 0.0 M 39.1 M 25.6 M 0.472 0.68 0.72 3.99 115 2.47 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/0187b88a-ef21-4ee4-bf5b-a8767b319733/@@download/cross_correlation_plot/ENCFF000RND.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB933KUT ENCFF000RND Illumina Genome Analyzer 2016-12-10T21:30:28.954870+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162vy003696z7JqGk4Yzy0q ENCSR000DKM https://www.encodeproject.org/experiments/ENCSR000DKM transcription factor POLR2A-human H54 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF894ODV https://www.encodeproject.org/files/ENCFF894ODV/@@download/ENCFF894ODV.bam ENCFF628TOL https://www.encodeproject.org/files/ENCFF628TOL/@@download/ENCFF628TOL.bam 29.7 M 0 20.8 M 0.700 SE 36 36 native 0.0 M 14.4 M 12.9 M 0.434 0.90 0.91 11.35 95 1.31 1.46 https://www.encodeproject.org/chipseq-filter-quality-metrics/92a26091-26a6-4294-b356-c47f6b4e1417/@@download/cross_correlation_plot/ENCFF000RNL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB221YYG ENCFF000RNL Illumina Genome Analyzer 2016-12-03T15:32:08.337530+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FPfQ0369Bj1yBJgxJgQjY ENCSR000DKM https://www.encodeproject.org/experiments/ENCSR000DKM transcription factor POLR2A-human H54 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF863OQV https://www.encodeproject.org/files/ENCFF863OQV/@@download/ENCFF863OQV.bam ENCFF617RAO https://www.encodeproject.org/files/ENCFF617RAO/@@download/ENCFF617RAO.bam 28.2 M 0 16.2 M 0.576 SE 36 36 native 0.0 M 11.9 M 9.8 M 0.348 0.83 0.85 7.02 100 1.98 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/94802c92-6753-4f12-9032-5faa52356802/@@download/cross_correlation_plot/ENCFF000RNQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB831VGL ENCFF000RNQ Illumina Genome Analyzer 2016-12-03T15:31:59.175024+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FPqQ0369P73Zx83JV9Z78 ENCSR000DLL https://www.encodeproject.org/experiments/ENCSR000DLL control Control-human heart tissue vishwanath-iyer ENCODE2 pending SE 51 Illumina Genome Analyzer unreviewed ENCSR000DLP https://www.encodeproject.org/experiments/ENCSR000DLP control Control-human HeLa-S3 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF949IKS https://www.encodeproject.org/files/ENCFF949IKS/@@download/ENCFF949IKS.bam ENCFF721BCM https://www.encodeproject.org/files/ENCFF721BCM/@@download/ENCFF721BCM.bam 12.3 M 0 11.6 M 0.939 SE 35 35 native 0.0 M 8.3 M 6.3 M 0.514 0.76 0.76 4.16 75 1.23 8.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/0ceacc84-1c4a-4768-9a98-96fb56c7c21b/@@download/cross_correlation_plot/ENCFF000RTF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB518GYC ENCFF000RTF Illumina Genome Analyzer 2016-10-26T17:58:24.917574+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0822p003694q32PPxBJ679Y ENCSR000DLO https://www.encodeproject.org/experiments/ENCSR000DLO "transcription factor,RNA binding protein" CTCF-human HeLa-S3 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF090GRO https://www.encodeproject.org/files/ENCFF090GRO/@@download/ENCFF090GRO.bam ENCFF744UXL https://www.encodeproject.org/files/ENCFF744UXL/@@download/ENCFF744UXL.bam 15.1 M 0 14.4 M 0.953 SE 35 35 native 0.0 M 11.4 M 9.5 M 0.628 0.83 0.85 7.74 85 5.48 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/d8880b3a-b0e9-4c28-a39a-f393af0a36cd/@@download/cross_correlation_plot/ENCFF000RTA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB001CGH ENCFF000RTA Illumina Genome Analyzer 2016-12-03T15:26:58.283869+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10GP7003696jYf95J6KFpZJ ENCSR000DLN https://www.encodeproject.org/experiments/ENCSR000DLN transcription factor MYC-human HeLa-S3 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF736JCX https://www.encodeproject.org/files/ENCFF736JCX/@@download/ENCFF736JCX.bam ENCFF666LSS https://www.encodeproject.org/files/ENCFF666LSS/@@download/ENCFF666LSS.bam 7.2 M 0 6.8 M 0.952 SE 35 35 native 0.0 M 4.9 M 4.9 M 0.682 0.99 0.99 96.75 90 1.08 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/39fb30a2-8856-486b-9b1e-120a81e05a73/@@download/cross_correlation_plot/ENCFF000RSR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB685PCU ENCFF000RSR Illumina Genome Analyzer 2016-12-03T15:32:39.785886+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F9y80369G7f86G1kzKXZ4 ENCSR000DLN https://www.encodeproject.org/experiments/ENCSR000DLN transcription factor MYC-human HeLa-S3 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF393ULV https://www.encodeproject.org/files/ENCFF393ULV/@@download/ENCFF393ULV.bam ENCFF282PAU https://www.encodeproject.org/files/ENCFF282PAU/@@download/ENCFF282PAU.bam 7.5 M 0 7.1 M 0.939 SE 35 35 native 0.0 M 5.2 M 5.0 M 0.663 0.96 0.96 23.37 95 1.18 2.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/2fad2006-1000-4f1d-9ac0-b35a2dd18ccd/@@download/cross_correlation_plot/ENCFF000RST.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB562XZR ENCFF000RST Illumina Genome Analyzer 2016-12-03T15:32:34.037646+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FB6Q0369P73Zx83JV9Z57 ENCSR000DLM https://www.encodeproject.org/experiments/ENCSR000DLM transcription factor POLR2A-human HeLa-S3 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF069HRG https://www.encodeproject.org/files/ENCFF069HRG/@@download/ENCFF069HRG.bam ENCFF159CBY https://www.encodeproject.org/files/ENCFF159CBY/@@download/ENCFF159CBY.bam 7.6 M 0 7.2 M 0.948 SE 35 35 native 0.0 M 5.7 M 5.1 M 0.680 0.90 0.90 10.50 170 2.68 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d6fbfdb-bb7f-4d91-b6fa-f267b53f3728/@@download/cross_correlation_plot/ENCFF000RTM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB566VYD ENCFF000RTM Illumina Genome Analyzer 2016-12-10T17:26:23.007639+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162FJ00369Bxb30J6x5bYz0 ENCSR000DLM https://www.encodeproject.org/experiments/ENCSR000DLM transcription factor POLR2A-human HeLa-S3 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF970GIW https://www.encodeproject.org/files/ENCFF970GIW/@@download/ENCFF970GIW.bam ENCFF582CWZ https://www.encodeproject.org/files/ENCFF582CWZ/@@download/ENCFF582CWZ.bam 15.2 M 0 10.1 M 0.665 SE 36 36 native 0.0 M 7.0 M 6.8 M 0.450 0.98 0.98 56.65 150 1.23 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/532764ab-0875-4432-8071-cf8caf8ee4e9/@@download/cross_correlation_plot/ENCFF000RTT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB805NGX ENCFF000RTT Illumina Genome Analyzer 2016-12-10T17:28:38.044111+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F162FVj0369Bxb30J6x5bYz9 ENCSR000DLT https://www.encodeproject.org/experiments/ENCSR000DLT control Control-human HepG2 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF138JNO https://www.encodeproject.org/files/ENCFF138JNO/@@download/ENCFF138JNO.bam ENCFF700WEC https://www.encodeproject.org/files/ENCFF700WEC/@@download/ENCFF700WEC.bam 12.3 M 0 11.7 M 0.948 SE 35 35 native 0.0 M 8.6 M 6.1 M 0.498 0.71 0.69 2.90 110 1.32 16.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/a41ebdc9-fcbe-45f2-8f3f-f3becafa2d72/@@download/cross_correlation_plot/ENCFF000RUP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB846RCB ENCFF000RUP Illumina Genome Analyzer 2016-10-26T17:38:36.650676+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082G3Q03699pQzk2JB6K7y7 ENCSR000DLS https://www.encodeproject.org/experiments/ENCSR000DLS "transcription factor,RNA binding protein" CTCF-human HepG2 immortalized cell line vishwanath-iyer ENCODE2 pending SE 35 Illumina Genome Analyzer unreviewed ENCSR000DLR https://www.encodeproject.org/experiments/ENCSR000DLR transcription factor MYC-human HepG2 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF263DIF https://www.encodeproject.org/files/ENCFF263DIF/@@download/ENCFF263DIF.bam ENCFF281EKT https://www.encodeproject.org/files/ENCFF281EKT/@@download/ENCFF281EKT.bam 12.0 M 0 10.6 M 0.886 SE 35 35 native 0.0 M 7.3 M 6.8 M 0.571 0.94 0.94 15.75 80 1.25 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/f03d7bbb-a574-4f49-82f7-bac3044fe6ac/@@download/cross_correlation_plot/ENCFF000RTY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB806YVE ENCFF000RTY Illumina Genome Analyzer 2016-12-03T15:32:40.850635+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FFbj036926pQgBz4zPqBV ENCSR000DLR https://www.encodeproject.org/experiments/ENCSR000DLR transcription factor MYC-human HepG2 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF398GCQ https://www.encodeproject.org/files/ENCFF398GCQ/@@download/ENCFF398GCQ.bam ENCFF080MNX https://www.encodeproject.org/files/ENCFF080MNX/@@download/ENCFF080MNX.bam 7.6 M 0 7.2 M 0.945 SE 35 35 native 0.0 M 5.1 M 4.9 M 0.647 0.97 0.97 32.57 90 1.14 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/850d1d11-f16c-44a4-943b-892353b7c53a/@@download/cross_correlation_plot/ENCFF000RTX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB827XGS ENCFF000RTX Illumina Genome Analyzer 2016-12-03T15:32:15.235304+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FFy80369B1Y4p7bPVBFzk ENCSR000DLR https://www.encodeproject.org/experiments/ENCSR000DLR transcription factor MYC-human HepG2 immortalized cell line 3 vishwanath-iyer ENCODE2 GRCh38 ENCFF572EKC https://www.encodeproject.org/files/ENCFF572EKC/@@download/ENCFF572EKC.bam ENCFF267YIK https://www.encodeproject.org/files/ENCFF267YIK/@@download/ENCFF267YIK.bam 7.3 M 0 6.8 M 0.942 SE 35 35 native 0.0 M 4.9 M 4.7 M 0.649 0.97 0.97 37.13 75 1.25 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/74d6a48b-ab49-4c50-b167-85c18f1d2151/@@download/cross_correlation_plot/ENCFF000RTV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB493FST ENCFF000RTV Illumina Genome Analyzer 2016-12-03T15:32:14.279430+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FG4Q03694f40x7bGYYpqP ENCSR000DLQ https://www.encodeproject.org/experiments/ENCSR000DLQ transcription factor POLR2A-human HepG2 immortalized cell line vishwanath-iyer ENCODE2 pending SE 35 Illumina Genome Analyzer unreviewed ENCSR000DNH https://www.encodeproject.org/experiments/ENCSR000DNH control Control-human HGPS cell immortalized cell line vishwanath-iyer ENCODE2 no fastqs unrunnable ENCSR000DNG https://www.encodeproject.org/experiments/ENCSR000DNG "transcription factor,RNA binding protein" CTCF-human HGPS cell immortalized cell line vishwanath-iyer ENCODE2 no fastqs unrunnable ENCSR000DNF https://www.encodeproject.org/experiments/ENCSR000DNF transcription factor POLR2A-human HGPS cell immortalized cell line vishwanath-iyer ENCODE2 no fastqs unrunnable ENCSR000DMB https://www.encodeproject.org/experiments/ENCSR000DMB control Control-human K562 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF020CFW https://www.encodeproject.org/files/ENCFF020CFW/@@download/ENCFF020CFW.bam ENCFF681OVW https://www.encodeproject.org/files/ENCFF681OVW/@@download/ENCFF681OVW.bam 16.9 M 0 16.4 M 0.970 SE 35 None 0.0 M 12.1 M 11.8 M 0.699 0.98 0.98 49.95 80 1.02 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/cde8d7e9-f3ed-4e48-89f0-93cc609c69bb/@@download/cross_correlation_plot/ENCFF000RWS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB327ZBL ENCFF000RWS Illumina Genome Analyzer 2016-07-28T00:32:23.923243+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGY4Kj03698GK4Pb413B1zQ ENCSR000DMA https://www.encodeproject.org/experiments/ENCSR000DMA "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF258HHO https://www.encodeproject.org/files/ENCFF258HHO/@@download/ENCFF258HHO.bam ENCFF783BDQ https://www.encodeproject.org/files/ENCFF783BDQ/@@download/ENCFF783BDQ.bam 7.2 M 0 6.7 M 0.935 SE 35 None 0.0 M 5.3 M 4.9 M 0.679 0.92 0.93 16.22 125 6.90 3.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/ab989ccc-b501-41eb-a0c1-a0b3a4edb7e1/@@download/cross_correlation_plot/ENCFF000RWH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB328HIA ENCFF000RWH Illumina Genome Analyzer 2016-07-28T00:31:07.330886+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYZvj0369FBX6gbJGByfFg ENCSR000DMA https://www.encodeproject.org/experiments/ENCSR000DMA "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF856DBD https://www.encodeproject.org/files/ENCFF856DBD/@@download/ENCFF856DBD.bam ENCFF242MMQ https://www.encodeproject.org/files/ENCFF242MMQ/@@download/ENCFF242MMQ.bam 7.2 M 0 6.9 M 0.948 SE 35 None 0.0 M 5.4 M 4.9 M 0.682 0.91 0.92 14.45 120 7.13 3.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/2836bd40-85ca-4830-9494-66616a4d5aab/@@download/cross_correlation_plot/ENCFF000RWK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB332KGO ENCFF000RWK Illumina Genome Analyzer 2016-07-28T00:31:04.350294+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYZyj03695kFGBYkGK8p9P ENCSR000DMA https://www.encodeproject.org/experiments/ENCSR000DMA "transcription factor,RNA binding protein" CTCF-human K562 immortalized cell line 3 vishwanath-iyer ENCODE2 GRCh38 ENCFF003OJN https://www.encodeproject.org/files/ENCFF003OJN/@@download/ENCFF003OJN.bam ENCFF202NWU https://www.encodeproject.org/files/ENCFF202NWU/@@download/ENCFF202NWU.bam 13.9 M 0 13.4 M 0.960 SE 35 None 0.0 M 10.5 M 9.5 M 0.681 0.90 0.92 14.84 95 4.53 1.81 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd9a435f-2dc5-4cfb-aef9-4122ca5f28a5/@@download/cross_correlation_plot/ENCFF000RWO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB073QIA ENCFF000RWO Illumina Genome Analyzer 2016-07-28T00:31:38.068071+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/ByGYb10036989fvjfJGG2fqB ENCSR000DLZ https://www.encodeproject.org/experiments/ENCSR000DLZ transcription factor MYC-human K562 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF826IIW https://www.encodeproject.org/files/ENCFF826IIW/@@download/ENCFF826IIW.bam ENCFF599CXO https://www.encodeproject.org/files/ENCFF599CXO/@@download/ENCFF599CXO.bam 13.4 M 0 12.4 M 0.927 SE 35 35 native 0.0 M 9.1 M 7.2 M 0.536 0.79 0.78 4.30 75 1.60 3.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/14ca24cb-28e9-45ea-8b40-79964ea85b37/@@download/cross_correlation_plot/ENCFF000RWD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB724YZS ENCFF000RWD Illumina Genome Analyzer 2016-12-03T15:31:18.720253+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FV8j036926pQgBz4zPqGV ENCSR000DLZ https://www.encodeproject.org/experiments/ENCSR000DLZ transcription factor MYC-human K562 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF440DMK https://www.encodeproject.org/files/ENCFF440DMK/@@download/ENCFF440DMK.bam ENCFF980SLK https://www.encodeproject.org/files/ENCFF980SLK/@@download/ENCFF980SLK.bam 12.2 M 0 10.2 M 0.832 SE 35 35 native 0.0 M 7.4 M 5.4 M 0.440 0.73 0.71 3.28 65 2.12 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/81d3c013-3f7b-4df2-b2b9-0fb0147ec2ed/@@download/cross_correlation_plot/ENCFF000RWE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB528JNT ENCFF000RWE Illumina Genome Analyzer 2016-12-03T15:30:53.873286+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FVKQ0369Bj1yBJgxJgQp2 ENCSR000DLZ https://www.encodeproject.org/experiments/ENCSR000DLZ transcription factor MYC-human K562 immortalized cell line 3 vishwanath-iyer ENCODE2 GRCh38 ENCFF936OBZ https://www.encodeproject.org/files/ENCFF936OBZ/@@download/ENCFF936OBZ.bam ENCFF185FQG https://www.encodeproject.org/files/ENCFF185FQG/@@download/ENCFF185FQG.bam 13.4 M 0 11.3 M 0.842 SE 35 35 native 0.0 M 8.1 M 5.6 M 0.416 0.69 0.67 2.83 85 1.61 2.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/430421e6-98f2-4eb1-9338-dadd960af7d2/@@download/cross_correlation_plot/ENCFF000RWG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB850MKU ENCFF000RWG Illumina Genome Analyzer 2016-12-03T15:30:54.100679+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FVZQ0369G08qP7bbvf7yz ENCSR000DLY https://www.encodeproject.org/experiments/ENCSR000DLY transcription factor POLR2A-human K562 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF922BNS https://www.encodeproject.org/files/ENCFF922BNS/@@download/ENCFF922BNS.bam ENCFF151ZKL https://www.encodeproject.org/files/ENCFF151ZKL/@@download/ENCFF151ZKL.bam 15.7 M 0 14.3 M 0.915 SE 35 35 native 0.0 M 10.5 M 9.4 M 0.601 0.90 0.90 10.64 100 1.62 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0a1e431-e36f-423a-abec-494e24dd0853/@@download/cross_correlation_plot/ENCFF000RWV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB221KJU ENCFF000RWV Illumina Genome Analyzer 2016-12-11T04:50:45.611460+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166BxQ0369GF0YB1zjPf776 ENCSR000DLY https://www.encodeproject.org/experiments/ENCSR000DLY transcription factor POLR2A-human K562 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF306VZA https://www.encodeproject.org/files/ENCFF306VZA/@@download/ENCFF306VZA.bam ENCFF872FER https://www.encodeproject.org/files/ENCFF872FER/@@download/ENCFF872FER.bam 28.8 M 0 25.9 M 0.900 SE 36 36 native 0.0 M 18.8 M 10.9 M 0.380 0.64 0.65 2.92 95 2.16 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/0beb3005-a40a-4383-8f92-1cd4c4f6ee8f/@@download/cross_correlation_plot/ENCFF000RXB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB500KOB ENCFF000RXB Illumina Genome Analyzer 2016-12-11T04:59:30.563395+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F166F3803695v47P6433JJ4K ENCSR678FZH https://www.encodeproject.org/experiments/ENCSR678FZH control Control-human keratinocyte primary cell 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF286XEY https://www.encodeproject.org/files/ENCFF286XEY/@@download/ENCFF286XEY.bam ENCFF451NZB https://www.encodeproject.org/files/ENCFF451NZB/@@download/ENCFF451NZB.bam 12.2 M 0 12.1 M 0.991 SE 36 36 native 0.0 M 7.8 M 7.3 M 0.603 0.95 0.95 20.73 105 1.22 2.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/865a9e5b-bb71-49bc-af68-1eddcb5a9117/@@download/cross_correlation_plot/ENCFF631TYY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB161XZM ENCFF631TYY Illumina Genome Analyzer 2016-10-26T17:41:25.642942+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082B1j0369PQyG3V5B44Q4Z ENCSR678FZH https://www.encodeproject.org/experiments/ENCSR678FZH control Control-human keratinocyte primary cell 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF595DFF https://www.encodeproject.org/files/ENCFF595DFF/@@download/ENCFF595DFF.bam ENCFF326QAX https://www.encodeproject.org/files/ENCFF326QAX/@@download/ENCFF326QAX.bam 14.6 M 0 14.5 M 0.991 SE 36 36 native 0.0 M 9.6 M 8.9 M 0.606 0.94 0.94 15.51 105 1.20 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/d45f7599-ac0c-4bfc-a727-0520291cb9fd/@@download/cross_correlation_plot/ENCFF849QBH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB086PUJ ENCFF849QBH Illumina Genome Analyzer 2016-10-26T17:41:04.942566+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F082B5j0369FFbbzvx9jvvqy ENCSR000DNC https://www.encodeproject.org/experiments/ENCSR000DNC "transcription factor,RNA binding protein" CTCF-human keratinocyte primary cell 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF291HCN https://www.encodeproject.org/files/ENCFF291HCN/@@download/ENCFF291HCN.bam ENCFF093JKS https://www.encodeproject.org/files/ENCFF093JKS/@@download/ENCFF093JKS.bam 16.2 M 0 13.0 M 0.800 SE 36 36 native 0.0 M 10.7 M 7.2 M 0.445 0.73 0.79 5.94 95 10.80 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/3014ae11-c4ac-41c1-891c-59605bd9e5fa/@@download/cross_correlation_plot/ENCFF000SCQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB607DWP ENCFF000SCQ Illumina Genome Analyzer 2017-04-09T03:37:32.171386+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkZG8036946P3GFVpGzzY7 ENCSR000DNC https://www.encodeproject.org/experiments/ENCSR000DNC "transcription factor,RNA binding protein" CTCF-human keratinocyte primary cell 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF118APQ https://www.encodeproject.org/files/ENCFF118APQ/@@download/ENCFF118APQ.bam ENCFF767YEK https://www.encodeproject.org/files/ENCFF767YEK/@@download/ENCFF767YEK.bam 15.4 M 0 13.4 M 0.868 SE 36 36 native 0.0 M 10.7 M 8.1 M 0.527 0.81 0.86 8.92 105 7.90 2.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/210d7bdc-867b-4851-aa1e-9ed936f8774f/@@download/cross_correlation_plot/ENCFF000SCV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB549QOI ENCFF000SCV Illumina Genome Analyzer 2017-04-09T03:39:53.683602+00:00 released unrunnable https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F3ZkZQQ036946P3GFVpGzzYP ENCSR000DMD https://www.encodeproject.org/experiments/ENCSR000DMD control Control-human kidney tissue 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF441DOX https://www.encodeproject.org/files/ENCFF441DOX/@@download/ENCFF441DOX.bam ENCFF273DTL https://www.encodeproject.org/files/ENCFF273DTL/@@download/ENCFF273DTL.bam 22.8 M 0 9.5 M 0.415 SE 51 51 native 0.0 M 7.5 M 7.1 M 0.310 0.97 0.97 34.52 160 1.08 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/47a71ddb-9a0b-43a9-b6fb-95586e7255c6/@@download/cross_correlation_plot/ENCFF000RXR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB169REG ENCFF000RXR Illumina Genome Analyzer 2017-04-14T18:25:09.054896+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1J8j0369PxG0zB309Gf0y ENCSR000DMC https://www.encodeproject.org/experiments/ENCSR000DMC "transcription factor,RNA binding protein" CTCF-human kidney tissue 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF467TZG https://www.encodeproject.org/files/ENCFF467TZG/@@download/ENCFF467TZG.bam ENCFF437FPB https://www.encodeproject.org/files/ENCFF437FPB/@@download/ENCFF437FPB.bam 24.6 M 0 12.6 M 0.514 SE 51 51 native 0.0 M 10.5 M 9.1 M 0.373 0.90 0.90 9.53 65 3.57 1.65 https://www.encodeproject.org/chipseq-filter-quality-metrics/83cdd525-4279-4e1d-94b7-d1f6b0bf9642/@@download/cross_correlation_plot/ENCFF000RXE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB141DZT ENCFF000RXE Illumina Genome Analyzer 2017-04-11T19:09:25.155431+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1GfQ0369KBxY56G6Q2kxf ENCSR000DMC https://www.encodeproject.org/experiments/ENCSR000DMC "transcription factor,RNA binding protein" CTCF-human kidney tissue 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF485UGO https://www.encodeproject.org/files/ENCFF485UGO/@@download/ENCFF485UGO.bam ENCFF699XJQ https://www.encodeproject.org/files/ENCFF699XJQ/@@download/ENCFF699XJQ.bam 9.0 M 0 4.3 M 0.474 SE 51 51 native 0.0 M 3.4 M 3.0 M 0.335 0.90 0.90 10.69 150 2.39 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/10eeceb2-7963-46b0-b60e-47f3941a765b/@@download/cross_correlation_plot/ENCFF000RXM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB358OSR ENCFF000RXM Illumina Genome Analyzer 2017-04-11T19:09:06.830219+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1Gqj03699pFPY6J841qKx ENCSR000DMC https://www.encodeproject.org/experiments/ENCSR000DMC "transcription factor,RNA binding protein" CTCF-human kidney tissue 3 vishwanath-iyer ENCODE2 GRCh38 ENCFF872PGU https://www.encodeproject.org/files/ENCFF872PGU/@@download/ENCFF872PGU.bam ENCFF697DNI https://www.encodeproject.org/files/ENCFF697DNI/@@download/ENCFF697DNI.bam 20.0 M 0 9.3 M 0.464 SE 51 51 native 0.0 M 7.4 M 5.5 M 0.276 0.78 0.79 4.93 150 2.13 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/b834a036-6156-4088-8ed7-328b75b474b2/@@download/cross_correlation_plot/ENCFF000RXV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB189BJC ENCFF000RXV Illumina Genome Analyzer 2017-04-11T19:09:35.271699+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1J3803694bgB52YPgFJzV ENCSR000DMG https://www.encodeproject.org/experiments/ENCSR000DMG control Control-human LNCaP clone FGC immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF534YMV https://www.encodeproject.org/files/ENCFF534YMV/@@download/ENCFF534YMV.bam ENCFF141AYW https://www.encodeproject.org/files/ENCFF141AYW/@@download/ENCFF141AYW.bam 20.4 M 0 7.0 M 0.343 SE 51 51 native 0.0 M 5.6 M 5.3 M 0.260 0.95 0.95 19.84 145 1.03 0.60 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c701a81-494e-4f4a-bfc1-ee837c967edd/@@download/cross_correlation_plot/ENCFF000RYG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB690OUT ENCFF000RYG Illumina Genome Analyzer 2016-12-03T15:32:23.682732+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FGJ003694f40x7bGYYpqk ENCSR000DME https://www.encodeproject.org/experiments/ENCSR000DME "transcription factor,RNA binding protein" CTCF-human LNCaP clone FGC immortalized cell line vishwanath-iyer ENCODE2 pending SE 51 Illumina Genome Analyzer unreviewed ENCSR000DMF https://www.encodeproject.org/experiments/ENCSR000DMF "transcription factor,RNA binding protein" CTCF-human LNCaP clone FGC immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF925XUX https://www.encodeproject.org/files/ENCFF925XUX/@@download/ENCFF925XUX.bam ENCFF526FIW https://www.encodeproject.org/files/ENCFF526FIW/@@download/ENCFF526FIW.bam 22.0 M 0 13.5 M 0.611 SE 51 51 native 0.0 M 11.1 M 9.6 M 0.434 0.89 0.89 8.61 80 3.36 1.39 https://www.encodeproject.org/chipseq-filter-quality-metrics/1641af91-38e1-4c68-9c27-eb1e0f61a818/@@download/cross_correlation_plot/ENCFF000RXX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB889CJU ENCFF000RXX Illumina Genome Analyzer 2016-12-03T15:33:00.470754+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FBJj0369JgF41P0Q6g1bX ENCSR000DMF https://www.encodeproject.org/experiments/ENCSR000DMF "transcription factor,RNA binding protein" CTCF-human LNCaP clone FGC immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF265TUU https://www.encodeproject.org/files/ENCFF265TUU/@@download/ENCFF265TUU.bam ENCFF925UWG https://www.encodeproject.org/files/ENCFF925UWG/@@download/ENCFF925UWG.bam 15.2 M 0 11.9 M 0.779 SE 51 51 native 0.0 M 9.9 M 8.2 M 0.536 0.86 0.86 7.15 75 4.78 1.13 https://www.encodeproject.org/chipseq-filter-quality-metrics/cd115639-f9d5-4fc3-9ed9-0736b676f956/@@download/cross_correlation_plot/ENCFF000RYB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB842YXB ENCFF000RYB Illumina Genome Analyzer 2016-12-03T15:32:41.922623+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FBj00369B1Y4p7bPVBFyq ENCSR000DMI https://www.encodeproject.org/experiments/ENCSR000DMI control Control-human lung tissue 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF923ZIK https://www.encodeproject.org/files/ENCFF923ZIK/@@download/ENCFF923ZIK.bam ENCFF050KAH https://www.encodeproject.org/files/ENCFF050KAH/@@download/ENCFF050KAH.bam 14.0 M 0 4.8 M 0.338 SE 51 51 native 0.0 M 3.8 M 3.7 M 0.266 0.99 0.99 79.07 130 1.05 0.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/7c9fc1e1-8ce8-46ec-b65c-843d7fa7e013/@@download/cross_correlation_plot/ENCFF000RYV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB044LDJ ENCFF000RYV Illumina Genome Analyzer 2017-07-05T15:40:43.320598+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F5JJ0Jj03696bpPjFQPGv6Yz ENCSR000DMH https://www.encodeproject.org/experiments/ENCSR000DMH "transcription factor,RNA binding protein" CTCF-human lung tissue 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF266UHU https://www.encodeproject.org/files/ENCFF266UHU/@@download/ENCFF266UHU.bam ENCFF834XJR https://www.encodeproject.org/files/ENCFF834XJR/@@download/ENCFF834XJR.bam 14.1 M 0 5.8 M 0.409 SE 51 51 native 0.0 M 4.7 M 4.0 M 0.281 0.87 0.88 8.41 150 4.11 2.04 https://www.encodeproject.org/chipseq-filter-quality-metrics/26dd65ca-e315-467b-b512-629c5b6e76c4/@@download/cross_correlation_plot/ENCFF000RYN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB013JSV ENCFF000RYN Illumina Genome Analyzer 2017-04-09T15:42:43.117217+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1G4Q0369KBxY56G6Q2kxK ENCSR000DMH https://www.encodeproject.org/experiments/ENCSR000DMH "transcription factor,RNA binding protein" CTCF-human lung tissue 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF111YZR https://www.encodeproject.org/files/ENCFF111YZR/@@download/ENCFF111YZR.bam ENCFF801HDI https://www.encodeproject.org/files/ENCFF801HDI/@@download/ENCFF801HDI.bam 8.8 M 0 4.0 M 0.455 SE 51 51 native 0.0 M 3.3 M 2.9 M 0.332 0.91 0.91 10.89 150 3.26 1.70 https://www.encodeproject.org/chipseq-filter-quality-metrics/f322f504-b803-4891-bbc6-2d5247d22cbd/@@download/cross_correlation_plot/ENCFF000RYL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB086PQG ENCFF000RYL Illumina Genome Analyzer 2017-04-09T15:43:08.613065+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1GF003697QpY56J2qQbJx ENCSR000DMW https://www.encodeproject.org/experiments/ENCSR000DMW control Control-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF946WAV https://www.encodeproject.org/files/ENCFF946WAV/@@download/ENCFF946WAV.bam ENCFF028DNB https://www.encodeproject.org/files/ENCFF028DNB/@@download/ENCFF028DNB.bam 30.0 M 0 29.8 M 0.991 SE 36 36 native 0.0 M 21.5 M 21.1 M 0.702 0.98 0.98 63.81 120 1.05 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/154387f2-1d2c-4366-a24d-a10c47da9a62/@@download/cross_correlation_plot/ENCFF000SAZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB262YBZ ENCFF000SAZ Illumina Genome Analyzer 2016-10-26T17:43:25.577155+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F0820bQ036923z1QYVBPkq25 ENCSR000DML https://www.encodeproject.org/experiments/ENCSR000DML "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF313OIM https://www.encodeproject.org/files/ENCFF313OIM/@@download/ENCFF313OIM.bam ENCFF204CZS https://www.encodeproject.org/files/ENCFF204CZS/@@download/ENCFF204CZS.bam 38.3 M 0 37.6 M 0.982 SE 36 36 native 0.0 M 26.0 M 21.1 M 0.551 0.82 0.87 10.19 105 2.49 1.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/a6200f37-1acb-4ccd-ade7-97bd7cf5614f/@@download/cross_correlation_plot/ENCFF000SAO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB668OCB ENCFF000SAO Illumina Genome Analyzer 2016-12-03T15:35:06.246074+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F6Vj0369KF4Pb84307Xpk ENCSR000DML https://www.encodeproject.org/experiments/ENCSR000DML "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF351CVI https://www.encodeproject.org/files/ENCFF351CVI/@@download/ENCFF351CVI.bam ENCFF742YXT https://www.encodeproject.org/files/ENCFF742YXT/@@download/ENCFF742YXT.bam 39.6 M 0 39.0 M 0.985 SE 36 36 native 0.0 M 28.8 M 20.6 M 0.520 0.73 0.83 8.37 110 3.33 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/87e3bd99-fb08-4044-9763-c62b53e55fbf/@@download/cross_correlation_plot/ENCFF000SAP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB811JMP ENCFF000SAP Illumina Genome Analyzer 2016-12-03T15:34:35.255249+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F6g00369Fz80X5Jq7Y6Y3 ENCSR000DMO https://www.encodeproject.org/experiments/ENCSR000DMO "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF181EQP https://www.encodeproject.org/files/ENCFF181EQP/@@download/ENCFF181EQP.bam ENCFF282LVO https://www.encodeproject.org/files/ENCFF282LVO/@@download/ENCFF282LVO.bam 37.8 M 0 36.9 M 0.976 SE 36 36 native 0.0 M 27.1 M 17.6 M 0.465 0.66 0.78 6.12 100 3.65 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/09b27a54-b92d-45bf-b4a7-bab720469cf7/@@download/cross_correlation_plot/ENCFF000SAK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB454HYZ ENCFF000SAK Illumina Genome Analyzer 2016-12-11T03:20:13.993868+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164GK00369KbxV61z4GFvBY ENCSR000DMO https://www.encodeproject.org/experiments/ENCSR000DMO "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF897MGD https://www.encodeproject.org/files/ENCFF897MGD/@@download/ENCFF897MGD.bam ENCFF007SEC https://www.encodeproject.org/files/ENCFF007SEC/@@download/ENCFF007SEC.bam 37.9 M 0 36.6 M 0.964 SE 36 36 native 0.0 M 27.4 M 12.6 M 0.333 0.48 0.62 3.37 95 4.85 1.64 https://www.encodeproject.org/chipseq-filter-quality-metrics/a1271c03-06c1-4dde-af2f-b8a1b2539b67/@@download/cross_correlation_plot/ENCFF000SAL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB104XBK ENCFF000SAL Illumina Genome Analyzer 2016-12-11T05:04:36.175516+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164GY003695Kj1j8qPQgkZv ENCSR000DMR https://www.encodeproject.org/experiments/ENCSR000DMR "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF854DIW https://www.encodeproject.org/files/ENCFF854DIW/@@download/ENCFF854DIW.bam ENCFF565XXO https://www.encodeproject.org/files/ENCFF565XXO/@@download/ENCFF565XXO.bam 52.3 M 0 48.5 M 0.928 SE 36 36 native 0.0 M 37.8 M 30.2 M 0.578 0.81 0.87 10.24 125 2.46 2.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/891752c1-f756-4ff4-8205-9204f2acb030/@@download/cross_correlation_plot/ENCFF000SAY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB708NHR ENCFF000SAY Illumina Genome Analyzer 2016-12-11T03:43:23.688216+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Qbj036993F1b953B4Q3v ENCSR000DMR https://www.encodeproject.org/experiments/ENCSR000DMR "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF232NLC https://www.encodeproject.org/files/ENCFF232NLC/@@download/ENCFF232NLC.bam ENCFF256JNK https://www.encodeproject.org/files/ENCFF256JNK/@@download/ENCFF256JNK.bam 49.3 M 0 46.0 M 0.933 SE 36 36 native 0.0 M 36.0 M 28.6 M 0.581 0.81 0.86 9.49 125 2.47 2.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1439557-f554-45a3-b6a5-5ac4c0c9fa60/@@download/cross_correlation_plot/ENCFF000SAX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB507POH ENCFF000SAX Illumina Genome Analyzer 2016-12-11T03:43:35.930739+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164Qp00369GF0YB1zjPf6Zk ENCSR000DMS https://www.encodeproject.org/experiments/ENCSR000DMS "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF623HMX https://www.encodeproject.org/files/ENCFF623HMX/@@download/ENCFF623HMX.bam ENCFF796ZPZ https://www.encodeproject.org/files/ENCFF796ZPZ/@@download/ENCFF796ZPZ.bam 60.6 M 0 59.9 M 0.988 SE 36 36 native 0.0 M 43.2 M 36.4 M 0.601 0.86 0.89 10.73 105 1.64 2.02 https://www.encodeproject.org/chipseq-filter-quality-metrics/5dd74007-1314-46d6-8d41-bdb4431ede66/@@download/cross_correlation_plot/ENCFF000SAB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB138BUC ENCFF000SAB Illumina Genome Analyzer 2016-12-03T15:33:23.724739+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FP6003694Bg03KFY5V9J1 ENCSR000DMS https://www.encodeproject.org/experiments/ENCSR000DMS "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF508RFI https://www.encodeproject.org/files/ENCFF508RFI/@@download/ENCFF508RFI.bam ENCFF702HAR https://www.encodeproject.org/files/ENCFF702HAR/@@download/ENCFF702HAR.bam 59.9 M 0 59.2 M 0.988 SE 36 36 native 0.0 M 43.7 M 38.1 M 0.637 0.89 0.92 14.46 110 1.60 2.12 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0bb3554-d34e-4d53-bf6e-116e643d4f28/@@download/cross_correlation_plot/ENCFF000SAD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB454PNG ENCFF000SAD Illumina Genome Analyzer 2016-12-03T15:33:11.772027+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FPJj0369G08qP7bbvf7xK ENCSR000DMV https://www.encodeproject.org/experiments/ENCSR000DMV "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF591QUF https://www.encodeproject.org/files/ENCFF591QUF/@@download/ENCFF591QUF.bam ENCFF406ZZD https://www.encodeproject.org/files/ENCFF406ZZD/@@download/ENCFF406ZZD.bam 22.6 M 0 21.5 M 0.950 SE 36 36 native 0.0 M 15.3 M 12.4 M 0.547 0.84 0.88 9.80 105 3.74 1.93 https://www.encodeproject.org/chipseq-filter-quality-metrics/c334261c-5361-454a-8649-6de0abaf6e30/@@download/cross_correlation_plot/ENCFF000RZX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB242HBO ENCFF000RZX Illumina Genome Analyzer 2016-12-03T15:33:52.327662+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F88803691P6G75J2zJ8vv ENCSR000DMV https://www.encodeproject.org/experiments/ENCSR000DMV "transcription factor,RNA binding protein" CTCF-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF783NXW https://www.encodeproject.org/files/ENCFF783NXW/@@download/ENCFF783NXW.bam ENCFF574MYJ https://www.encodeproject.org/files/ENCFF574MYJ/@@download/ENCFF574MYJ.bam 25.8 M 0 24.4 M 0.948 SE 36 36 native 0.0 M 17.8 M 14.0 M 0.542 0.82 0.86 8.63 100 3.64 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5695d1d-da23-4ab5-b365-a6e657d4e162/@@download/cross_correlation_plot/ENCFF000RZY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB269UGU ENCFF000RZY Illumina Genome Analyzer 2016-12-03T15:33:31.786325+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F8jj0369JY9454zXbp33K ENCSR000DMJ https://www.encodeproject.org/experiments/ENCSR000DMJ transcription factor MYC-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF439LPX https://www.encodeproject.org/files/ENCFF439LPX/@@download/ENCFF439LPX.bam ENCFF807FZS https://www.encodeproject.org/files/ENCFF807FZS/@@download/ENCFF807FZS.bam 36.7 M 0 35.7 M 0.972 SE 36 36 native 0.0 M 22.3 M 18.6 M 0.507 0.84 0.86 7.37 100 1.32 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/033d99a9-1778-4986-8ccd-2910f9bccba0/@@download/cross_correlation_plot/ENCFF000RZJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB509HAI ENCFF000RZJ Illumina Genome Analyzer 2016-12-11T03:33:57.895111+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164G3j0369BJyPz9fb9qY1K ENCSR000DMJ https://www.encodeproject.org/experiments/ENCSR000DMJ transcription factor MYC-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF414VTM https://www.encodeproject.org/files/ENCFF414VTM/@@download/ENCFF414VTM.bam ENCFF390BGO https://www.encodeproject.org/files/ENCFF390BGO/@@download/ENCFF390BGO.bam 39.0 M 0 37.3 M 0.958 SE 36 36 native 0.0 M 23.0 M 17.9 M 0.458 0.79 0.79 4.89 105 1.31 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/7daf0efd-c42b-4be3-a2c0-e1cecb3b495c/@@download/cross_correlation_plot/ENCFF000RZL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB662CFD ENCFF000RZL Illumina Genome Analyzer 2016-12-11T03:21:46.302179+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F164G8Q0369PvYp91zK1Px9V ENCSR000DMM https://www.encodeproject.org/experiments/ENCSR000DMM transcription factor MYC-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF254ZSI https://www.encodeproject.org/files/ENCFF254ZSI/@@download/ENCFF254ZSI.bam ENCFF670PJL https://www.encodeproject.org/files/ENCFF670PJL/@@download/ENCFF670PJL.bam 66.5 M 0 60.6 M 0.911 SE 36 36 native 0.0 M 39.1 M 13.6 M 0.205 0.38 0.58 3.22 85 2.18 1.52 https://www.encodeproject.org/chipseq-filter-quality-metrics/fdca8120-3964-4521-8a19-6076d90c85aa/@@download/cross_correlation_plot/ENCFF000RZE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB529IXU ENCFF000RZE Illumina Genome Analyzer 2016-12-11T02:06:40.095469+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163V5003693J2XX63yZ7Byf ENCSR000DMM https://www.encodeproject.org/experiments/ENCSR000DMM transcription factor MYC-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF696MVS https://www.encodeproject.org/files/ENCFF696MVS/@@download/ENCFF696MVS.bam ENCFF504IOK https://www.encodeproject.org/files/ENCFF504IOK/@@download/ENCFF504IOK.bam 38.9 M 0 37.2 M 0.954 SE 36 36 native 0.0 M 25.0 M 20.5 M 0.525 0.83 0.83 5.99 95 1.43 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/69a071b9-9ab7-479e-aa87-5da28504d47d/@@download/cross_correlation_plot/ENCFF000RZC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB034OHW ENCFF000RZC Illumina Genome Analyzer 2016-12-11T00:24:25.811809+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163VB003697K4B1J71pxzpJ ENCSR000DMP https://www.encodeproject.org/experiments/ENCSR000DMP transcription factor MYC-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF987KST https://www.encodeproject.org/files/ENCFF987KST/@@download/ENCFF987KST.bam ENCFF296RZI https://www.encodeproject.org/files/ENCFF296RZI/@@download/ENCFF296RZI.bam 58.2 M 0 56.6 M 0.973 SE 36 36 native 0.0 M 39.0 M 33.6 M 0.576 0.88 0.88 8.70 105 1.19 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/10bf8441-a527-449d-9ed7-126fa3c337f9/@@download/cross_correlation_plot/ENCFF000RYO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB863RPW ENCFF000RYO Illumina Genome Analyzer 2016-12-03T15:33:33.509905+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FJK80369B1Y4p7bPVBG0V ENCSR000DMP https://www.encodeproject.org/experiments/ENCSR000DMP transcription factor MYC-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF870YIK https://www.encodeproject.org/files/ENCFF870YIK/@@download/ENCFF870YIK.bam ENCFF358WIR https://www.encodeproject.org/files/ENCFF358WIR/@@download/ENCFF358WIR.bam 59.9 M 0 58.7 M 0.980 SE 36 36 native 0.0 M 41.1 M 38.0 M 0.635 0.93 0.94 16.51 115 1.09 1.71 https://www.encodeproject.org/chipseq-filter-quality-metrics/9a0ecb39-8784-4013-9974-96340342f6a0/@@download/cross_correlation_plot/ENCFF000RYP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB266FRJ ENCFF000RYP Illumina Genome Analyzer 2016-12-03T15:33:32.336081+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FJk8036926pQgBz4zPqBy ENCSR000DMQ https://www.encodeproject.org/experiments/ENCSR000DMQ transcription factor MYC-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF602ZTX https://www.encodeproject.org/files/ENCFF602ZTX/@@download/ENCFF602ZTX.bam ENCFF929ODT https://www.encodeproject.org/files/ENCFF929ODT/@@download/ENCFF929ODT.bam 48.5 M 0 32.1 M 0.661 SE 36 36 native 0.0 M 22.9 M 16.1 M 0.333 0.72 0.77 5.03 100 1.64 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/8e675217-9cc1-4b05-89a1-b56da165851d/@@download/cross_correlation_plot/ENCFF000RZT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB713YJR ENCFF000RZT Illumina Genome Analyzer 2016-12-11T00:44:01.761787+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Vkj0369KQ3Yk1yz1kfbY ENCSR000DMQ https://www.encodeproject.org/experiments/ENCSR000DMQ transcription factor MYC-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF354ONG https://www.encodeproject.org/files/ENCFF354ONG/@@download/ENCFF354ONG.bam ENCFF539SCC https://www.encodeproject.org/files/ENCFF539SCC/@@download/ENCFF539SCC.bam 52.9 M 0 49.5 M 0.935 SE 36 36 native 0.0 M 35.0 M 19.0 M 0.359 0.58 0.62 2.98 115 1.39 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/834e7607-6200-483b-ad90-3c9c8b03293e/@@download/cross_correlation_plot/ENCFF000RZV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB067TLM ENCFF000RZV Illumina Genome Analyzer 2016-12-11T01:18:50.328199+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F163Vy803692pJ09J76g5g0Q ENCSR000DMK https://www.encodeproject.org/experiments/ENCSR000DMK transcription factor POLR2A-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF690CUE https://www.encodeproject.org/files/ENCFF690CUE/@@download/ENCFF690CUE.bam ENCFF184GAG https://www.encodeproject.org/files/ENCFF184GAG/@@download/ENCFF184GAG.bam 38.5 M 0 37.4 M 0.971 SE 36 36 native 0.0 M 24.4 M 18.8 M 0.487 0.78 0.80 5.18 115 2.01 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/ec771ff2-19d6-49d9-8eec-d558fbebd0ec/@@download/cross_correlation_plot/ENCFF000SBV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB220AYO ENCFF000SBV Illumina Genome Analyzer 2016-12-03T15:33:16.635315+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FGY803694f40x7bGYYpv1 ENCSR000DMK https://www.encodeproject.org/experiments/ENCSR000DMK transcription factor POLR2A-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF878XRG https://www.encodeproject.org/files/ENCFF878XRG/@@download/ENCFF878XRG.bam ENCFF618CFY https://www.encodeproject.org/files/ENCFF618CFY/@@download/ENCFF618CFY.bam 38.4 M 0 37.3 M 0.971 SE 36 36 native 0.0 M 24.4 M 20.1 M 0.523 0.83 0.85 6.88 120 1.79 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/0d008bfc-8f74-4f69-b0ad-d3f38c8e4990/@@download/cross_correlation_plot/ENCFF000SBY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB277BAK ENCFF000SBY Illumina Genome Analyzer 2016-12-03T15:33:28.891537+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FJ5Q03693pxQV8B8Kkb0g ENCSR000DMN https://www.encodeproject.org/experiments/ENCSR000DMN transcription factor POLR2A-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF974ACJ https://www.encodeproject.org/files/ENCFF974ACJ/@@download/ENCFF974ACJ.bam ENCFF861AUH https://www.encodeproject.org/files/ENCFF861AUH/@@download/ENCFF861AUH.bam 37.1 M 0 35.4 M 0.953 SE 36 36 native 0.0 M 23.8 M 17.5 M 0.470 0.75 0.81 6.27 100 2.56 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/647b728b-1a76-45d8-9df4-200d214f5f97/@@download/cross_correlation_plot/ENCFF000SBO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB324CTO ENCFF000SBO Illumina Genome Analyzer 2016-12-11T04:27:29.426850+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165JvQ0369BJyPz9fb9qYF3 ENCSR000DMN https://www.encodeproject.org/experiments/ENCSR000DMN transcription factor POLR2A-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF779NYT https://www.encodeproject.org/files/ENCFF779NYT/@@download/ENCFF779NYT.bam ENCFF272NAY https://www.encodeproject.org/files/ENCFF272NAY/@@download/ENCFF272NAY.bam 38.3 M 0 36.6 M 0.955 SE 36 36 native 0.0 M 24.0 M 20.0 M 0.521 0.84 0.87 8.24 105 1.93 1.32 https://www.encodeproject.org/chipseq-filter-quality-metrics/1d25a860-6e3d-4918-84f9-68cbee777db2/@@download/cross_correlation_plot/ENCFF000SBP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB146MXM ENCFF000SBP Illumina Genome Analyzer 2016-12-11T04:28:02.158349+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F165K1Q0369PvYp91zK1PxXZ ENCSR000DMT https://www.encodeproject.org/experiments/ENCSR000DMT transcription factor POLR2A-human MCF-7 immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF496YAE https://www.encodeproject.org/files/ENCFF496YAE/@@download/ENCFF496YAE.bam ENCFF235JOE https://www.encodeproject.org/files/ENCFF235JOE/@@download/ENCFF235JOE.bam 30.3 M 0 29.7 M 0.982 SE 36 36 native 0.0 M 22.6 M 21.4 M 0.706 0.95 0.95 22.17 75 1.14 1.09 https://www.encodeproject.org/chipseq-filter-quality-metrics/e467ffe6-0e26-4cc4-abb1-57acbfd99252/@@download/cross_correlation_plot/ENCFF000SBI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB469RNT ENCFF000SBI Illumina Genome Analyzer 2016-12-03T15:34:40.904394+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F6xQ0369K5PF65Gy7JFFg ENCSR000DMT https://www.encodeproject.org/experiments/ENCSR000DMT transcription factor POLR2A-human MCF-7 immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF881YOO https://www.encodeproject.org/files/ENCFF881YOO/@@download/ENCFF881YOO.bam ENCFF216WWF https://www.encodeproject.org/files/ENCFF216WWF/@@download/ENCFF216WWF.bam 29.6 M 0 28.9 M 0.978 SE 36 36 native 0.0 M 21.9 M 19.9 M 0.673 0.92 0.93 14.90 70 1.44 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/08a2803d-3ee9-4c54-803a-b942c6f1b479/@@download/cross_correlation_plot/ENCFF000SBK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB603AGP ENCFF000SBK Illumina Genome Analyzer 2016-12-03T15:34:09.462709+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F72Q0369Jpg7Y5Gq58fXg ENCSR000DMX https://www.encodeproject.org/experiments/ENCSR000DMX control Control-human medulloblastoma immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF215ULH https://www.encodeproject.org/files/ENCFF215ULH/@@download/ENCFF215ULH.bam ENCFF705VYI https://www.encodeproject.org/files/ENCFF705VYI/@@download/ENCFF705VYI.bam 22.6 M 0 18.3 M 0.808 SE 51 51 native 0.0 M 14.8 M 12.6 M 0.555 0.88 0.88 8.87 110 1.42 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/d9b247d7-dae0-4d4a-98c2-c98b9f577597/@@download/cross_correlation_plot/ENCFF000SCG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB764KDJ ENCFF000SCG Illumina Genome Analyzer 2016-12-03T15:33:51.115289+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F8080369K5PF65Gy7JFGF ENCSR000DMY https://www.encodeproject.org/experiments/ENCSR000DMY "transcription factor,RNA binding protein" CTCF-human medulloblastoma immortalized cell line 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF482VWN https://www.encodeproject.org/files/ENCFF482VWN/@@download/ENCFF482VWN.bam ENCFF079QBW https://www.encodeproject.org/files/ENCFF079QBW/@@download/ENCFF079QBW.bam 17.3 M 0 15.0 M 0.868 SE 51 51 native 0.0 M 12.9 M 10.5 M 0.605 0.85 0.87 7.84 100 2.82 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/8025b07b-c07c-4486-87d1-1cadc0109f8a/@@download/cross_correlation_plot/ENCFF000SCC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB999FYY ENCFF000SCC Illumina Genome Analyzer 2016-12-03T15:32:57.218899+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FF2Q03694f40x7bGYYpq2 ENCSR000DMY https://www.encodeproject.org/experiments/ENCSR000DMY "transcription factor,RNA binding protein" CTCF-human medulloblastoma immortalized cell line 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF291LYW https://www.encodeproject.org/files/ENCFF291LYW/@@download/ENCFF291LYW.bam ENCFF857JTI https://www.encodeproject.org/files/ENCFF857JTI/@@download/ENCFF857JTI.bam 24.1 M 0 20.1 M 0.836 SE 51 51 native 0.0 M 17.2 M 14.6 M 0.607 0.88 0.90 10.25 75 2.23 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/7ddf3eff-1b43-478c-94da-5496a85db1ea/@@download/cross_correlation_plot/ENCFF000SCF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB676BXW ENCFF000SCF Illumina Genome Analyzer 2016-12-03T15:33:01.519747+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10FF900369Bj1yBJgxJgQg4 ENCSR000DNE https://www.encodeproject.org/experiments/ENCSR000DNE control Control-human pancreas tissue 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF689XBW https://www.encodeproject.org/files/ENCFF689XBW/@@download/ENCFF689XBW.bam ENCFF056YDV https://www.encodeproject.org/files/ENCFF056YDV/@@download/ENCFF056YDV.bam 29.4 M 0 14.7 M 0.500 SE 51 51 native 0.0 M 11.5 M 10.7 M 0.363 0.95 0.95 19.39 145 1.16 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/de87c086-ef34-4830-9206-c4b1416f84e6/@@download/cross_correlation_plot/ENCFF000SDU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB216YYH ENCFF000SDU Illumina Genome Analyzer 2017-04-14T18:25:02.418265+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1FBj0369KBxY56G6Q2kx4 ENCSR000DND https://www.encodeproject.org/experiments/ENCSR000DND "transcription factor,RNA binding protein" CTCF-human pancreas tissue 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF753GJH https://www.encodeproject.org/files/ENCFF753GJH/@@download/ENCFF753GJH.bam ENCFF379XVD https://www.encodeproject.org/files/ENCFF379XVD/@@download/ENCFF379XVD.bam 13.9 M 0 5.1 M 0.365 SE 51 51 native 0.0 M 4.2 M 3.8 M 0.274 0.93 0.94 17.36 85 7.09 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/f5f4a0ab-5303-4717-8375-a7b1dd17e170/@@download/cross_correlation_plot/ENCFF000SDG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB138KOL ENCFF000SDG Illumina Genome Analyzer 2017-04-14T18:30:35.454621+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1FQ803699pFPY6J841qKF ENCSR000DND https://www.encodeproject.org/experiments/ENCSR000DND "transcription factor,RNA binding protein" CTCF-human pancreas tissue 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF018QYS https://www.encodeproject.org/files/ENCFF018QYS/@@download/ENCFF018QYS.bam ENCFF911ANI https://www.encodeproject.org/files/ENCFF911ANI/@@download/ENCFF911ANI.bam 11.7 M 0 5.5 M 0.467 SE 51 51 native 0.0 M 4.6 M 3.8 M 0.324 0.86 0.87 7.84 110 7.02 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/cbfc66a9-07b2-4906-9b4b-d037f1d35e74/@@download/cross_correlation_plot/ENCFF000SDQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB967UKM ENCFF000SDQ Illumina Genome Analyzer 2017-04-14T18:30:36.431030+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1Fbj03699pFPY6J841qKY ENCSR000DKK https://www.encodeproject.org/experiments/ENCSR000DKK control Control-human skin fibroblast primary cell vishwanath-iyer ENCODE2 no fastqs unreviewed ENCSR000DKL https://www.encodeproject.org/experiments/ENCSR000DKL "transcription factor,RNA binding protein" CTCF-human skin fibroblast primary cell vishwanath-iyer ENCODE2 no fastqs unreviewed ENCSR000DNJ https://www.encodeproject.org/experiments/ENCSR000DNJ control Control-human spleen tissue 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF348JCV https://www.encodeproject.org/files/ENCFF348JCV/@@download/ENCFF348JCV.bam ENCFF787HFY https://www.encodeproject.org/files/ENCFF787HFY/@@download/ENCFF787HFY.bam 31.2 M 0 11.7 M 0.374 SE 51 51 native 0.0 M 9.5 M 9.3 M 0.297 0.98 0.98 53.76 160 1.02 0.49 https://www.encodeproject.org/chipseq-filter-quality-metrics/bea65da3-04b2-4cd5-b809-7b8cda9284aa/@@download/cross_correlation_plot/ENCFF000SEH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB155UVY ENCFF000SEH Illumina Genome Analyzer 2017-04-09T04:13:46.923797+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F1B1Fx80369J92qZ2Bf62ZYV ENCSR000DNI https://www.encodeproject.org/experiments/ENCSR000DNI "transcription factor,RNA binding protein" CTCF-human spleen tissue 1 vishwanath-iyer ENCODE2 GRCh38 ENCFF061SRP https://www.encodeproject.org/files/ENCFF061SRP/@@download/ENCFF061SRP.bam ENCFF429NUZ https://www.encodeproject.org/files/ENCFF429NUZ/@@download/ENCFF429NUZ.bam 33.1 M 0 15.7 M 0.475 SE 51 51 native 0.0 M 12.7 M 11.1 M 0.334 0.90 0.91 11.49 95 2.75 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/3489e9ee-375d-4eb5-bf06-d43ce7efa55c/@@download/cross_correlation_plot/ENCFF000SEC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB266XAI ENCFF000SEC Illumina Genome Analyzer 2016-12-03T15:34:27.014229+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F78Q03691P6G75J2zJ8vP ENCSR000DNI https://www.encodeproject.org/experiments/ENCSR000DNI "transcription factor,RNA binding protein" CTCF-human spleen tissue 2 vishwanath-iyer ENCODE2 GRCh38 ENCFF059JNI https://www.encodeproject.org/files/ENCFF059JNI/@@download/ENCFF059JNI.bam ENCFF337IBI https://www.encodeproject.org/files/ENCFF337IBI/@@download/ENCFF337IBI.bam 27.6 M 0 14.3 M 0.520 SE 51 51 native 0.0 M 11.7 M 8.2 M 0.299 0.76 0.78 5.18 110 3.60 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/26ace79c-4c32-4a43-a074-df7ea55b0732/@@download/cross_correlation_plot/ENCFF000SEB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB698YST ENCFF000SEB Illumina Genome Analyzer 2016-12-03T15:34:11.992159+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F10F7J80369Fz80X5Jq7Y6YX ENCSR032EZQ https://www.encodeproject.org/experiments/ENCSR032EZQ control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF619YOF https://www.encodeproject.org/files/ENCFF619YOF/@@download/ENCFF619YOF.bam ENCFF431FEY https://www.encodeproject.org/files/ENCFF431FEY/@@download/ENCFF431FEY.bam 33.7 M 0 31.8 M 0.943 SE 40 None 0.0 M 26.4 M 25.8 M 0.765 0.98 0.98 54.40 90 1.02 2.19 https://www.encodeproject.org/chipseq-filter-quality-metrics/f67977a5-ac47-4937-a62e-8fb3b8868019/@@download/cross_correlation_plot/ENCFF386QNN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB994MJC xiang-dong-fu:L-input_Control_rep1_HepG2_batch14 ENCFF386QNN HiSeq 2000 2016-06-25T05:33:20.397416+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvgG00369Fqzv9B81X79fq ENCSR032EZQ https://www.encodeproject.org/experiments/ENCSR032EZQ control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF107PCV https://www.encodeproject.org/files/ENCFF107PCV/@@download/ENCFF107PCV.bam ENCFF427ZMQ https://www.encodeproject.org/files/ENCFF427ZMQ/@@download/ENCFF427ZMQ.bam 44.5 M 0 42.3 M 0.950 SE 40 None 0.0 M 34.7 M 33.8 M 0.761 0.98 0.98 50.00 100 1.01 2.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/2f626650-f4c1-43ce-965f-afcdbc8937aa/@@download/cross_correlation_plot/ENCFF319AWI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB167DYD xiang-dong-fu:L-input_Control_rep2_HepG2_batch14 ENCFF319AWI HiSeq 2000 2016-06-25T05:33:52.098765+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvgK803694Z7Qq0438568x ENCSR079WWH https://www.encodeproject.org/experiments/ENCSR079WWH control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF629YZR https://www.encodeproject.org/files/ENCFF629YZR/@@download/ENCFF629YZR.bam ENCFF120QOW https://www.encodeproject.org/files/ENCFF120QOW/@@download/ENCFF120QOW.bam 48.2 M 0 45.3 M 0.939 SE 40 40 None 0.0 M 38.5 M 37.7 M 0.782 0.98 0.98 59.68 100 1.02 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/77e058c9-0cba-4e1a-bfc5-6a6de70e28af/@@download/cross_correlation_plot/ENCFF197MJX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB760CXR xiang-dong-fu:L-input_rep1_HepG2_Batch5 ENCFF197MJX HiSeq 2000 2016-05-06T18:15:09.230410+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvj7Q03694Z7Qq0438569f ENCSR079WWH https://www.encodeproject.org/experiments/ENCSR079WWH control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF563YRA https://www.encodeproject.org/files/ENCFF563YRA/@@download/ENCFF563YRA.bam ENCFF952YHB https://www.encodeproject.org/files/ENCFF952YHB/@@download/ENCFF952YHB.bam 52.3 M 0 49.1 M 0.938 SE 40 40 None 0.0 M 40.2 M 39.3 M 0.752 0.98 0.98 63.02 105 1.02 1.55 https://www.encodeproject.org/chipseq-filter-quality-metrics/4c53587e-5909-4061-9b26-e1d22fca317e/@@download/cross_correlation_plot/ENCFF011ZUM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB312KNU xiang-dong-fu:L-input_rep2_HepG2_Batch5 ENCFF011ZUM HiSeq 2000 2016-05-06T18:15:24.084143+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvj9Q03693Zb4P6xpxxbxz ENCSR141EZP https://www.encodeproject.org/experiments/ENCSR141EZP control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF322OEH https://www.encodeproject.org/files/ENCFF322OEH/@@download/ENCFF322OEH.bam ENCFF806VPE https://www.encodeproject.org/files/ENCFF806VPE/@@download/ENCFF806VPE.bam 50.1 M 0 45.6 M 0.911 SE 40 40 None 0.0 M 38.6 M 37.3 M 0.744 0.97 0.97 40.29 100 1.02 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/01e171c8-b2be-4df7-a400-f2ced6915b08/@@download/cross_correlation_plot/ENCFF310PFX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB272VNA xiang-dong-fu:L-input_rep1_HepG2_Batch8 ENCFF310PFX HiSeq 2000 2016-05-06T18:15:00.500204+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvk6803694Z7Qq043856BY ENCSR141EZP https://www.encodeproject.org/experiments/ENCSR141EZP control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF707WXP https://www.encodeproject.org/files/ENCFF707WXP/@@download/ENCFF707WXP.bam ENCFF100MPD https://www.encodeproject.org/files/ENCFF100MPD/@@download/ENCFF100MPD.bam 34.8 M 0 31.3 M 0.899 SE 40 40 None 0.0 M 26.3 M 25.6 M 0.736 0.98 0.98 47.48 95 1.02 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/a731f2e2-3342-4170-a41d-8ad53b537cf4/@@download/cross_correlation_plot/ENCFF282ICF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB112MEK xiang-dong-fu:L-input_rep2_HepG2_Batch8 ENCFF282ICF HiSeq 2000 2016-05-06T18:15:03.531636+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvk880369J31Q0Pkv5xpJ4 ENCSR254UDV https://www.encodeproject.org/experiments/ENCSR254UDV control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF736TJP https://www.encodeproject.org/files/ENCFF736TJP/@@download/ENCFF736TJP.bam ENCFF271JZR https://www.encodeproject.org/files/ENCFF271JZR/@@download/ENCFF271JZR.bam 50.4 M 0 47.1 M 0.934 SE 40 40 None 0.0 M 39.4 M 38.4 M 0.761 0.98 0.98 49.31 90 1.02 1.63 https://www.encodeproject.org/chipseq-filter-quality-metrics/5ae20df3-0489-42d1-8561-22ba41ef98e4/@@download/cross_correlation_plot/ENCFF218RAX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB650BNO xiang-dong-fu:L-input_rep1_HepG2_Batch11 ENCFF218RAX HiSeq 2000 2016-05-06T18:14:36.218908+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvzXj03694Z7Qq043856PJ ENCSR254UDV https://www.encodeproject.org/experiments/ENCSR254UDV control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF842ALK https://www.encodeproject.org/files/ENCFF842ALK/@@download/ENCFF842ALK.bam ENCFF978ZZB https://www.encodeproject.org/files/ENCFF978ZZB/@@download/ENCFF978ZZB.bam 45.0 M 0 41.9 M 0.932 SE 40 40 None 0.0 M 35.3 M 34.4 M 0.766 0.98 0.98 48.54 100 1.02 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/6631b524-887c-4b77-aa07-57e411a0f1d6/@@download/cross_correlation_plot/ENCFF743NIF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB169IFQ xiang-dong-fu:L-input_rep2_HepG2_Batch11 ENCFF743NIF HiSeq 2000 2016-05-06T18:14:35.492997+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvzZj0369J31Q0Pkv5xpV5 ENCSR352VNP https://www.encodeproject.org/experiments/ENCSR352VNP control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF060VZM https://www.encodeproject.org/files/ENCFF060VZM/@@download/ENCFF060VZM.bam ENCFF920RYN https://www.encodeproject.org/files/ENCFF920RYN/@@download/ENCFF920RYN.bam 38.0 M 0 36.2 M 0.954 SE 40 40 native 0.0 M 29.4 M 28.9 M 0.762 0.98 0.99 74.28 90 1.01 1.83 https://www.encodeproject.org/chipseq-filter-quality-metrics/8d81b702-9f3c-4f33-8ac6-3454156fa81f/@@download/cross_correlation_plot/ENCFF442FJZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB810FPW xiang-dong-fu:L-input_Control_rep1_HepG2_batch15 ENCFF442FJZ HiSeq 2000 2017-02-08T18:21:26.825700+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5Vj00369Jz5KzBYx51p23 ENCSR352VNP https://www.encodeproject.org/experiments/ENCSR352VNP control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF809MGU https://www.encodeproject.org/files/ENCFF809MGU/@@download/ENCFF809MGU.bam ENCFF324YZM https://www.encodeproject.org/files/ENCFF324YZM/@@download/ENCFF324YZM.bam 40.7 M 0 38.6 M 0.948 SE 40 40 native 0.0 M 31.0 M 30.5 M 0.749 0.98 0.99 78.44 100 1.01 1.68 https://www.encodeproject.org/chipseq-filter-quality-metrics/166afc59-8e96-449e-927e-b6c217ffedc3/@@download/cross_correlation_plot/ENCFF269ATE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB242FBS xiang-dong-fu:L-input_Control_rep2_HepG2_batch15 ENCFF269ATE HiSeq 2000 2017-02-08T18:22:00.124379+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5Vyj03693q4Kq8J76Q618 ENCSR487JIM https://www.encodeproject.org/experiments/ENCSR487JIM control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF707OHH https://www.encodeproject.org/files/ENCFF707OHH/@@download/ENCFF707OHH.bam ENCFF174VYS https://www.encodeproject.org/files/ENCFF174VYS/@@download/ENCFF174VYS.bam 45.9 M 0 42.5 M 0.927 SE 40 None 0.0 M 35.3 M 34.6 M 0.754 0.98 0.98 60.86 100 1.02 1.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/1f0b1ed8-6ad0-4310-8dbc-6f70da3142ee/@@download/cross_correlation_plot/ENCFF196IPB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB738PUD xiang-dong-fu:L-input_rep1_HepG2_Batch10 ENCFF196IPB HiSeq 2000 2016-05-06T18:12:31.280807+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx3pj0369J31Q0Pkv5xpb6 ENCSR487JIM https://www.encodeproject.org/experiments/ENCSR487JIM control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF058TVV https://www.encodeproject.org/files/ENCFF058TVV/@@download/ENCFF058TVV.bam ENCFF206EPF https://www.encodeproject.org/files/ENCFF206EPF/@@download/ENCFF206EPF.bam 42.0 M 0 38.8 M 0.923 SE 40 None 0.0 M 31.8 M 31.1 M 0.740 0.98 0.98 53.98 100 1.02 2.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/a215fcde-15c9-41f2-a524-2d1dab6b9a53/@@download/cross_correlation_plot/ENCFF377ZTC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB616BGE xiang-dong-fu:L-input_rep2_HepG2_Batch10 ENCFF377ZTC HiSeq 2000 2016-05-06T18:12:31.358229+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx3vj03693gbZ2XvPBXK58 ENCSR545RWZ https://www.encodeproject.org/experiments/ENCSR545RWZ control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF719EDQ https://www.encodeproject.org/files/ENCFF719EDQ/@@download/ENCFF719EDQ.bam ENCFF215VZE https://www.encodeproject.org/files/ENCFF215VZE/@@download/ENCFF215VZE.bam 44.4 M 0 42.4 M 0.954 SE 40 40 native 0.0 M 34.5 M 33.8 M 0.761 0.98 0.99 69.50 95 1.01 1.82 https://www.encodeproject.org/chipseq-filter-quality-metrics/089d8513-517c-47d8-bcf0-3f21bef1c499/@@download/cross_correlation_plot/ENCFF605JOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB311KGY xiang-dong-fu:L-input_Control_rep1_HepG2_batch16 ENCFF605JOL HiSeq 2500 2017-02-08T18:22:02.590650+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5V9j036936fvz0bK5QF2g ENCSR545RWZ https://www.encodeproject.org/experiments/ENCSR545RWZ control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF874GUL https://www.encodeproject.org/files/ENCFF874GUL/@@download/ENCFF874GUL.bam ENCFF562USM https://www.encodeproject.org/files/ENCFF562USM/@@download/ENCFF562USM.bam 40.5 M 0 38.6 M 0.953 SE 40 40 native 0.0 M 31.6 M 31.0 M 0.765 0.98 0.99 74.07 95 1.01 1.66 https://www.encodeproject.org/chipseq-filter-quality-metrics/d1c4a3b1-2094-4820-8bb3-f17cbed920b0/@@download/cross_correlation_plot/ENCFF061XKR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB044BBI xiang-dong-fu:L-input_Control_rep2_HepG2_batch16 ENCFF061XKR HiSeq 2000 2017-02-08T18:21:57.554911+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5VQQ03698Y174Fz56kgXP ENCSR550ZLZ https://www.encodeproject.org/experiments/ENCSR550ZLZ control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF808MKF https://www.encodeproject.org/files/ENCFF808MKF/@@download/ENCFF808MKF.bam ENCFF603BUP https://www.encodeproject.org/files/ENCFF603BUP/@@download/ENCFF603BUP.bam 40.4 M 0 37.4 M 0.926 SE 40 40 None 0.0 M 31.0 M 30.2 M 0.747 0.98 0.98 50.74 90 1.02 2.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/58c99c0e-087e-4e17-b99a-211be099f969/@@download/cross_correlation_plot/ENCFF866EMZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB650MIJ xiang-dong-fu:L-input_rep1_HepG2_Batch4 ENCFF866EMZ HiSeq 2000 2016-05-06T18:11:51.750954+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx62Q036960jj23bp11BXb ENCSR550ZLZ https://www.encodeproject.org/experiments/ENCSR550ZLZ control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF875UWF https://www.encodeproject.org/files/ENCFF875UWF/@@download/ENCFF875UWF.bam ENCFF586OAQ https://www.encodeproject.org/files/ENCFF586OAQ/@@download/ENCFF586OAQ.bam 41.7 M 0 39.4 M 0.946 SE 40 40 None 0.0 M 32.2 M 31.6 M 0.758 0.98 0.99 73.92 115 1.02 1.58 https://www.encodeproject.org/chipseq-filter-quality-metrics/4baf0900-aa4c-4432-a027-996e68514c7a/@@download/cross_correlation_plot/ENCFF306JCM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB265MAW xiang-dong-fu:L-input_rep2_HepG2_Batch4 ENCFF306JCM HiSeq 2000 2016-05-06T18:11:57.576461+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx65803698YQ49Xb7p2bk8 ENCSR561BTA https://www.encodeproject.org/experiments/ENCSR561BTA control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF951CQL https://www.encodeproject.org/files/ENCFF951CQL/@@download/ENCFF951CQL.bam ENCFF173SFW https://www.encodeproject.org/files/ENCFF173SFW/@@download/ENCFF173SFW.bam 36.6 M 0 34.4 M 0.938 SE 40 40 None 0.0 M 27.8 M 27.2 M 0.741 0.98 0.98 55.47 95 1.02 1.90 https://www.encodeproject.org/chipseq-filter-quality-metrics/48abc798-15e4-409e-9dd4-31776409ea95/@@download/cross_correlation_plot/ENCFF593HBL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB412YIY xiang-dong-fu:L-input_rep1_HepG2_Batch6 ENCFF593HBL HiSeq 2000 2016-05-06T18:10:55.498946+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx6800369J31Q0Pkv5xpgJ ENCSR561BTA https://www.encodeproject.org/experiments/ENCSR561BTA control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF550DOI https://www.encodeproject.org/files/ENCFF550DOI/@@download/ENCFF550DOI.bam ENCFF272IKY https://www.encodeproject.org/files/ENCFF272IKY/@@download/ENCFF272IKY.bam 33.5 M 0 30.7 M 0.918 SE 40 40 None 0.0 M 25.4 M 24.8 M 0.741 0.98 0.98 48.69 85 1.02 2.61 https://www.encodeproject.org/chipseq-filter-quality-metrics/aed3fbea-a686-4e03-b8dc-b0d3ab55c45c/@@download/cross_correlation_plot/ENCFF289XBX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB078OMN xiang-dong-fu:L-input_rep2_HepG2_Batch6 ENCFF289XBX HiSeq 2000 2016-05-06T18:10:40.159625+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx69j036960jj23bp11BXx ENCSR735QJO https://www.encodeproject.org/experiments/ENCSR735QJO control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF253UKR https://www.encodeproject.org/files/ENCFF253UKR/@@download/ENCFF253UKR.bam ENCFF526GBB https://www.encodeproject.org/files/ENCFF526GBB/@@download/ENCFF526GBB.bam 36.6 M 0 33.6 M 0.918 SE 40 40 native 0.0 M 27.3 M 26.8 M 0.734 0.99 0.99 88.22 100 1.02 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/edffb09e-01cc-41d3-8dd7-a8e30876737f/@@download/cross_correlation_plot/ENCFF101DEV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB478EJM xiang-dong-fu:L-input_Control_rep1_HepG2_batch17 ENCFF101DEV HiSeq 2500 2017-02-08T18:21:51.850584+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5QqQ0369Jfvx1Fz8Y14yv ENCSR735QJO https://www.encodeproject.org/experiments/ENCSR735QJO control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF279QEN https://www.encodeproject.org/files/ENCFF279QEN/@@download/ENCFF279QEN.bam ENCFF110QIK https://www.encodeproject.org/files/ENCFF110QIK/@@download/ENCFF110QIK.bam 40.4 M 0 37.2 M 0.921 SE 40 40 native 0.0 M 30.2 M 29.6 M 0.734 0.98 0.99 75.45 100 1.02 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a5216c0-f227-47a9-8452-deefed22845a/@@download/cross_correlation_plot/ENCFF426URQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB857CNO xiang-dong-fu:L-input_Control_rep2_HepG2_batch17 ENCFF426URQ HiSeq 2500 2017-02-08T18:21:59.508625+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5V280369P4P0Y2yb055ZP ENCSR748EXO https://www.encodeproject.org/experiments/ENCSR748EXO control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF872JOE https://www.encodeproject.org/files/ENCFF872JOE/@@download/ENCFF872JOE.bam ENCFF510GFY https://www.encodeproject.org/files/ENCFF510GFY/@@download/ENCFF510GFY.bam 45.5 M 0 42.7 M 0.939 SE 40 40 None 0.0 M 34.5 M 34.0 M 0.747 0.99 0.99 87.22 90 1.01 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/2b5416ff-d58c-4fbc-8b58-5a725fa515e5/@@download/cross_correlation_plot/ENCFF883CMB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB590RYX xiang-dong-fu:L-input_rep1_HepG2_Batch12 ENCFF883CMB HiSeq 2000 2016-05-06T18:06:17.303610+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx95j0369Fqzv9B81X7B12 ENCSR748EXO https://www.encodeproject.org/experiments/ENCSR748EXO control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF659EXP https://www.encodeproject.org/files/ENCFF659EXP/@@download/ENCFF659EXP.bam ENCFF289MCV https://www.encodeproject.org/files/ENCFF289MCV/@@download/ENCFF289MCV.bam 58.7 M 0 55.0 M 0.937 SE 40 40 None 0.0 M 44.3 M 43.5 M 0.740 0.98 0.99 69.81 105 1.01 1.84 https://www.encodeproject.org/chipseq-filter-quality-metrics/8fd49151-63e5-493b-9bf3-1f081a6c87de/@@download/cross_correlation_plot/ENCFF526TGW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB992WLF xiang-dong-fu:L-input_rep2_HepG2_Batch12 ENCFF526TGW HiSeq 2000 2016-05-06T18:06:05.579796+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx98003693gbZ2XvPBXK7X ENCSR775ETD https://www.encodeproject.org/experiments/ENCSR775ETD control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF728ZED https://www.encodeproject.org/files/ENCFF728ZED/@@download/ENCFF728ZED.bam ENCFF305WQU https://www.encodeproject.org/files/ENCFF305WQU/@@download/ENCFF305WQU.bam 43.0 M 0 39.7 M 0.924 SE 40 40 None 0.0 M 33.0 M 32.3 M 0.752 0.98 0.98 63.99 100 1.02 1.69 https://www.encodeproject.org/chipseq-filter-quality-metrics/f66b2b13-45c2-4c46-a8e8-71209a095ebb/@@download/cross_correlation_plot/ENCFF521SIZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB449GDS xiang-dong-fu:L-input_rep1_HepG2_Batch9 ENCFF521SIZ HiSeq 2000 2016-05-06T18:03:51.904117+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx9F803694Z7Qq043856b8 ENCSR775ETD https://www.encodeproject.org/experiments/ENCSR775ETD control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF349NCR https://www.encodeproject.org/files/ENCFF349NCR/@@download/ENCFF349NCR.bam ENCFF871OYT https://www.encodeproject.org/files/ENCFF871OYT/@@download/ENCFF871OYT.bam 32.1 M 0 29.6 M 0.923 SE 40 40 None 0.0 M 24.7 M 24.3 M 0.757 0.98 0.99 77.18 95 1.02 1.57 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1a73433-a1db-4f9a-870b-af2cf961cee3/@@download/cross_correlation_plot/ENCFF448VZC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB641UIY xiang-dong-fu:L-input_rep2_HepG2_Batch9 ENCFF448VZC HiSeq 2000 2016-05-06T18:03:39.643446+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx9J803694Z7Qq043856bQ ENCSR792MRQ https://www.encodeproject.org/experiments/ENCSR792MRQ control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF526MTA https://www.encodeproject.org/files/ENCFF526MTA/@@download/ENCFF526MTA.bam ENCFF712VMA https://www.encodeproject.org/files/ENCFF712VMA/@@download/ENCFF712VMA.bam 51.7 M 0 47.9 M 0.927 SE 40 40 None 0.0 M 39.8 M 38.6 M 0.747 0.98 0.99 70.26 95 1.02 2.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/a3b7c3ab-01a3-47ce-96ae-5387965cff12/@@download/cross_correlation_plot/ENCFF017VZP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB311DDU xiang-dong-fu:L-input_rep1_HepG2_Batch3 ENCFF017VZP HiSeq 2000 2016-05-06T18:04:49.664915+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx9b8036960jj23bp11BbY ENCSR792MRQ https://www.encodeproject.org/experiments/ENCSR792MRQ control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF027JVI https://www.encodeproject.org/files/ENCFF027JVI/@@download/ENCFF027JVI.bam ENCFF940NQH https://www.encodeproject.org/files/ENCFF940NQH/@@download/ENCFF940NQH.bam 50.7 M 0 46.7 M 0.923 SE 40 40 None 0.0 M 38.8 M 37.7 M 0.744 0.98 0.99 72.88 90 1.02 1.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/2c17ef01-541b-4fb0-989b-68a43be5f56c/@@download/cross_correlation_plot/ENCFF298FEZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB954EAO xiang-dong-fu:L-input_rep2_HepG2_Batch3 ENCFF298FEZ HiSeq 2000 2016-05-06T18:04:54.253309+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx9g8036960jj23bp11Bbv ENCSR867VPL https://www.encodeproject.org/experiments/ENCSR867VPL control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF890CQW https://www.encodeproject.org/files/ENCFF890CQW/@@download/ENCFF890CQW.bam ENCFF578GAN https://www.encodeproject.org/files/ENCFF578GAN/@@download/ENCFF578GAN.bam 108.6 M 0 84.8 M 0.781 SE 40 None 0.0 M 69.8 M 67.3 M 0.620 0.97 0.97 40.05 95 1.02 1.92 https://www.encodeproject.org/chipseq-filter-quality-metrics/a5f637fa-b3c9-4ede-88db-67afaa8e38d3/@@download/cross_correlation_plot/ENCFF299MMO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB337JGZ xiang-dong-fu:L-input_Control_rep1_HepG2_batch13 ENCFF299MMO HiSeq 2000 2016-06-25T05:35:33.524421+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxG2003698YQ49Xb7p2bvY ENCSR867VPL https://www.encodeproject.org/experiments/ENCSR867VPL control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF026GVE https://www.encodeproject.org/files/ENCFF026GVE/@@download/ENCFF026GVE.bam ENCFF057DCQ https://www.encodeproject.org/files/ENCFF057DCQ/@@download/ENCFF057DCQ.bam 102.9 M 0 80.5 M 0.782 SE 40 None 0.0 M 66.2 M 63.7 M 0.619 0.97 0.97 37.63 95 1.02 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/67ec461c-749d-4dab-ac04-7d9ae933abd8/@@download/cross_correlation_plot/ENCFF592CBA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB100TZA xiang-dong-fu:L-input_Control_rep2_HepG2_batch13 ENCFF592CBA HiSeq 2000 2016-06-25T05:34:35.028652+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxG4Q036960jj23bp11Bg4 ENCSR975KJI https://www.encodeproject.org/experiments/ENCSR975KJI control Control-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF450GNQ https://www.encodeproject.org/files/ENCFF450GNQ/@@download/ENCFF450GNQ.bam ENCFF670ZTJ https://www.encodeproject.org/files/ENCFF670ZTJ/@@download/ENCFF670ZTJ.bam 32.4 M 0 30.0 M 0.925 SE 40 40 None 0.0 M 25.1 M 24.4 M 0.752 0.98 0.98 44.14 100 1.02 2.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/a77c4835-0f12-4e3e-92b8-c47400a20736/@@download/cross_correlation_plot/ENCFF292SYX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB610NUB xiang-dong-fu:L-input_rep1_HepG2_Batch7 ENCFF292SYX HiSeq 2000 2016-05-06T17:57:45.825169+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxK3j03693gbZ2XvPBXKF8 ENCSR975KJI https://www.encodeproject.org/experiments/ENCSR975KJI control Control-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF901YVZ https://www.encodeproject.org/files/ENCFF901YVZ/@@download/ENCFF901YVZ.bam ENCFF565EDH https://www.encodeproject.org/files/ENCFF565EDH/@@download/ENCFF565EDH.bam 41.8 M 0 38.2 M 0.913 SE 40 40 None 0.0 M 31.7 M 30.4 M 0.727 0.96 0.97 29.35 95 1.02 2.03 https://www.encodeproject.org/chipseq-filter-quality-metrics/55b42ad0-75de-48be-b644-e5e4a5ade943/@@download/cross_correlation_plot/ENCFF887XCD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB160HSF xiang-dong-fu:L-input_rep2_HepG2_Batch7 ENCFF887XCD HiSeq 2000 2016-05-06T17:40:07.358951+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxK5j03694Z7Qq043856k9 ENCSR590QQP https://www.encodeproject.org/experiments/ENCSR590QQP "transcription factor,RNA binding protein" FUS-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF303HBX https://www.encodeproject.org/files/ENCFF303HBX/@@download/ENCFF303HBX.bam ENCFF783SHE https://www.encodeproject.org/files/ENCFF783SHE/@@download/ENCFF783SHE.bam 23.5 M 0 16.8 M 0.714 SE 40 40 native 0.0 M 13.9 M 11.0 M 0.468 0.81 0.81 5.18 130 1.04 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/4f396091-22bb-4ee5-a333-bd23785d549a/@@download/cross_correlation_plot/ENCFF114BXG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB568TWU xiang-dong-fu:L-FUS_ChIP_rep1_HepG2_batch12 ENCFF114BXG HiSeq 2500 2017-02-04T00:53:41.837954+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV8VQ03697G42vFQVBFF3q ENCSR590QQP https://www.encodeproject.org/experiments/ENCSR590QQP "transcription factor,RNA binding protein" FUS-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF431TAL https://www.encodeproject.org/files/ENCFF431TAL/@@download/ENCFF431TAL.bam ENCFF958HCN https://www.encodeproject.org/files/ENCFF958HCN/@@download/ENCFF958HCN.bam 38.9 M 0 28.2 M 0.725 SE 40 40 native 0.0 M 23.4 M 18.1 M 0.466 0.78 0.78 4.50 110 1.03 1.38 https://www.encodeproject.org/chipseq-filter-quality-metrics/ca8c7e23-1585-471d-89b0-895d30752cfc/@@download/cross_correlation_plot/ENCFF616ZLN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB784IRX xiang-dong-fu:L-FUS_ChIP_rep2_HepG2_batch12 ENCFF616ZLN HiSeq 2500 2017-02-04T01:25:51.190029+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV8p00369F13JyFQ4qV80q ENCSR382PVA https://www.encodeproject.org/experiments/ENCSR382PVA "RNA binding protein,transcription factor" GTF2F1-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF199NEL https://www.encodeproject.org/files/ENCFF199NEL/@@download/ENCFF199NEL.bam ENCFF378VHQ https://www.encodeproject.org/files/ENCFF378VHQ/@@download/ENCFF378VHQ.bam 22.7 M 0 16.0 M 0.706 SE 40 40 native 0.0 M 11.9 M 10.8 M 0.478 0.91 0.91 10.88 135 1.06 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/d259b279-abb6-4415-bcb6-7d2fb030a2b4/@@download/cross_correlation_plot/ENCFF215OIS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB515USM xiang-dong-fu:L-GTF2F1_ChIP_rep1_HepG2_batch17 ENCFF215OIS HiSeq 2500 2017-02-04T00:37:12.867165+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV1bQ0369P4VQpFPXJ7y0x ENCSR382PVA https://www.encodeproject.org/experiments/ENCSR382PVA "RNA binding protein,transcription factor" GTF2F1-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF418SGE https://www.encodeproject.org/files/ENCFF418SGE/@@download/ENCFF418SGE.bam ENCFF287HTO https://www.encodeproject.org/files/ENCFF287HTO/@@download/ENCFF287HTO.bam 25.5 M 0 21.5 M 0.846 SE 40 40 native 0.0 M 16.1 M 12.9 M 0.507 0.80 0.80 4.70 135 1.06 1.48 https://www.encodeproject.org/chipseq-filter-quality-metrics/218f1d72-0735-4f92-b170-063e58b7bd10/@@download/cross_correlation_plot/ENCFF816NNH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB971FYE xiang-dong-fu:L-GTF2F1_ChIP_rep2_HepG2_batch17 ENCFF816NNH HiSeq 2500 2017-02-04T00:43:19.760419+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV1vQ0369P4VQpFPXJ7y17 ENCSR315JJE https://www.encodeproject.org/experiments/ENCSR315JJE "transcription factor,RNA binding protein" HNRNPL-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF146SND https://www.encodeproject.org/files/ENCFF146SND/@@download/ENCFF146SND.bam ENCFF369ZUO https://www.encodeproject.org/files/ENCFF369ZUO/@@download/ENCFF369ZUO.bam 21.3 M 0 16.8 M 0.789 SE 40 40 native 0.0 M 13.4 M 11.6 M 0.544 0.87 0.87 7.68 150 1.22 1.43 https://www.encodeproject.org/chipseq-filter-quality-metrics/fb72ea2a-520d-4083-a16c-2773013978a2/@@download/cross_correlation_plot/ENCFF356DMG.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB978JFA xiang-dong-fu:L-HNRNPL_ChIP_rep1_HepG2_batch17 ENCFF356DMG HiSeq 2500 2017-02-04T00:40:00.061316+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV4b00369PkX3JFQFq2BpB ENCSR315JJE https://www.encodeproject.org/experiments/ENCSR315JJE "transcription factor,RNA binding protein" HNRNPL-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF560SVR https://www.encodeproject.org/files/ENCFF560SVR/@@download/ENCFF560SVR.bam ENCFF609FGI https://www.encodeproject.org/files/ENCFF609FGI/@@download/ENCFF609FGI.bam 19.5 M 0 15.4 M 0.790 SE 40 40 native 0.0 M 12.3 M 10.0 M 0.514 0.82 0.81 5.26 165 1.18 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/795610ee-51b6-4e28-8f42-cbb49162e166/@@download/cross_correlation_plot/ENCFF450ZOR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB801TCQ xiang-dong-fu:L-HNRNPL_ChIP_rep2_HepG2_batch17 ENCFF450ZOR HiSeq 2500 2017-02-04T00:39:31.658897+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV51j03697G42vFQVBFF2P ENCSR183AXJ https://www.encodeproject.org/experiments/ENCSR183AXJ "transcription factor,RNA binding protein" HNRNPUL1-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF110WTS https://www.encodeproject.org/files/ENCFF110WTS/@@download/ENCFF110WTS.bam ENCFF557UCL https://www.encodeproject.org/files/ENCFF557UCL/@@download/ENCFF557UCL.bam 33.0 M 0 18.3 M 0.556 SE 40 40 native 0.0 M 15.3 M 13.6 M 0.411 0.89 0.89 9.29 120 1.03 1.08 https://www.encodeproject.org/chipseq-filter-quality-metrics/ebf562ae-c086-4182-b139-9754df87e08e/@@download/cross_correlation_plot/ENCFF693ECZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB907RSX xiang-dong-fu:L-HNRNPUL1_ChIP_rep1_HepG2_batch17 ENCFF693ECZ HiSeq 2500 2017-02-04T01:00:27.262219+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVB1803693kZj85jYX6VxB ENCSR183AXJ https://www.encodeproject.org/experiments/ENCSR183AXJ "transcription factor,RNA binding protein" HNRNPUL1-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF478RXX https://www.encodeproject.org/files/ENCFF478RXX/@@download/ENCFF478RXX.bam ENCFF135FEK https://www.encodeproject.org/files/ENCFF135FEK/@@download/ENCFF135FEK.bam 36.2 M 0 24.6 M 0.680 SE 40 40 native 0.0 M 20.6 M 16.2 M 0.449 0.79 0.79 4.67 125 1.03 0.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/9490dbf4-a1b2-4830-a40b-2538a71da74a/@@download/cross_correlation_plot/ENCFF525RRE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB108WWE xiang-dong-fu:L-HNRNPUL1_ChIP_rep2_HepG2_batch17 ENCFF525RRE HiSeq 2500 2017-02-04T01:26:10.070125+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVB900369PkX3JFQFq2ByQ ENCSR923UTX https://www.encodeproject.org/experiments/ENCSR923UTX "RNA binding protein,transcription factor" NONO-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF687MHD https://www.encodeproject.org/files/ENCFF687MHD/@@download/ENCFF687MHD.bam ENCFF891OJS https://www.encodeproject.org/files/ENCFF891OJS/@@download/ENCFF891OJS.bam 20.4 M 0 18.8 M 0.922 SE 40 None 0.0 M 15.9 M 10.8 M 0.530 0.68 0.68 3.04 165 1.59 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/1e575075-5072-4a18-9d50-55de92378b30/@@download/cross_correlation_plot/ENCFF712IBC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB426CCN xiang-dong-fu:L-NONO_ChIP_rep1_HepG2_batch14 ENCFF712IBC HiSeq 2000 2016-06-25T05:27:33.422965+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxGxj03693gbZ2XvPBXKB6 ENCSR923UTX https://www.encodeproject.org/experiments/ENCSR923UTX "RNA binding protein,transcription factor" NONO-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF056SXW https://www.encodeproject.org/files/ENCFF056SXW/@@download/ENCFF056SXW.bam ENCFF360JLK https://www.encodeproject.org/files/ENCFF360JLK/@@download/ENCFF360JLK.bam 19.0 M 0 17.4 M 0.916 SE 40 None 0.0 M 14.7 M 10.3 M 0.544 0.70 0.70 3.25 155 1.38 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/366ff788-a489-40f1-a222-30e70e8984c6/@@download/cross_correlation_plot/ENCFF144SDE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB218YMG xiang-dong-fu:L-NONO_ChIP_rep2_HepG2_batch14 ENCFF144SDE HiSeq 2000 2016-06-25T05:27:07.671537+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxJ0803694Z7Qq043856j0 ENCSR872EVQ https://www.encodeproject.org/experiments/ENCSR872EVQ "transcription factor,RNA binding protein" PCBP1-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF349HMO https://www.encodeproject.org/files/ENCFF349HMO/@@download/ENCFF349HMO.bam ENCFF599NPN https://www.encodeproject.org/files/ENCFF599NPN/@@download/ENCFF599NPN.bam 23.4 M 0 15.2 M 0.650 SE 40 40 native 0.0 M 12.0 M 11.0 M 0.467 0.92 0.92 12.32 130 1.09 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/4a42c99e-a5a6-4267-84bf-21611db0609b/@@download/cross_correlation_plot/ENCFF407HGX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB242HHG xiang-dong-fu:L-PCBP1_ChIP_rep1_HepG2_batch17 ENCFF407HGX HiSeq 2500 2017-02-04T00:39:33.310354+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQq680369P4VQpFPXJ7xyX ENCSR872EVQ https://www.encodeproject.org/experiments/ENCSR872EVQ "transcription factor,RNA binding protein" PCBP1-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF242FNL https://www.encodeproject.org/files/ENCFF242FNL/@@download/ENCFF242FNL.bam ENCFF624RFV https://www.encodeproject.org/files/ENCFF624RFV/@@download/ENCFF624RFV.bam 20.6 M 0 15.9 M 0.771 SE 40 40 native 0.0 M 12.6 M 10.8 M 0.522 0.86 0.86 6.80 135 1.05 1.59 https://www.encodeproject.org/chipseq-filter-quality-metrics/9bb98d2a-f0ec-41f4-93b4-5f3ea4277d34/@@download/cross_correlation_plot/ENCFF192STJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB411RCQ xiang-dong-fu:L-PCBP1_ChIP_rep2_HepG2_batch17 ENCFF192STJ HiSeq 2500 2017-02-04T00:32:24.947337+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQqVj03697G42vFQVBFByQ ENCSR243LNQ https://www.encodeproject.org/experiments/ENCSR243LNQ "transcription factor,RNA binding protein" PRPF4-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF952RFD https://www.encodeproject.org/files/ENCFF952RFD/@@download/ENCFF952RFD.bam ENCFF442LTS https://www.encodeproject.org/files/ENCFF442LTS/@@download/ENCFF442LTS.bam 22.6 M 0 18.7 M 0.826 SE 40 None 0.0 M 14.1 M 9.7 M 0.428 0.69 0.68 2.90 160 1.06 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/c0a173a5-bf8f-419e-b9e3-9b1aa158f455/@@download/cross_correlation_plot/ENCFF306RZC.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB623QSQ xiang-dong-fu:L-PRPF4_rep1_HepG2_Batch7 ENCFF306RZC HiSeq 2000 2016-06-25T05:31:23.088373+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvyv80369Fqzv9B81X79p9 ENCSR243LNQ https://www.encodeproject.org/experiments/ENCSR243LNQ "transcription factor,RNA binding protein" PRPF4-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF743VYA https://www.encodeproject.org/files/ENCFF743VYA/@@download/ENCFF743VYA.bam ENCFF890HTX https://www.encodeproject.org/files/ENCFF890HTX/@@download/ENCFF890HTX.bam 24.1 M 0 18.5 M 0.770 SE 40 None 0.0 M 13.9 M 8.3 M 0.344 0.61 0.58 2.20 190 1.07 2.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/23645241-6017-4219-9a6d-83b852b5874b/@@download/cross_correlation_plot/ENCFF769MBT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB186DQE xiang-dong-fu:L-PRPF4_rep2_HepG2_Batch7 ENCFF769MBT HiSeq 2000 2016-06-25T05:31:18.251003+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvyyj036960jj23bp11BK1 ENCSR784FYS https://www.encodeproject.org/experiments/ENCSR784FYS "transcription factor,RNA binding protein" RBFOX2-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF033GIO https://www.encodeproject.org/files/ENCFF033GIO/@@download/ENCFF033GIO.bam ENCFF308IPC https://www.encodeproject.org/files/ENCFF308IPC/@@download/ENCFF308IPC.bam 19.4 M 0 14.9 M 0.769 SE 40 40 native 0.0 M 13.2 M 11.2 M 0.574 0.84 0.87 9.35 150 2.32 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/40bb5aac-193f-450d-80a8-9f65bfba8fd9/@@download/cross_correlation_plot/ENCFF733YBM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB978KWF xiang-dong-fu:L-RBFOX2_ChIP_rep1_HepG2_batch16 ENCFF733YBM HiSeq 2500 2017-02-04T00:40:06.496583+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV5KQ0369200gbFPKvPyQ2 ENCSR784FYS https://www.encodeproject.org/experiments/ENCSR784FYS "transcription factor,RNA binding protein" RBFOX2-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF739WOA https://www.encodeproject.org/files/ENCFF739WOA/@@download/ENCFF739WOA.bam ENCFF275WHJ https://www.encodeproject.org/files/ENCFF275WHJ/@@download/ENCFF275WHJ.bam 17.9 M 0 15.1 M 0.842 SE 40 40 native 0.0 M 13.3 M 11.2 M 0.625 0.84 0.87 8.72 155 2.14 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/db5c79b2-1f1d-4765-9196-8a95842fcb4a/@@download/cross_correlation_plot/ENCFF251CER.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB182SDO xiang-dong-fu:L-RBFOX2_ChIP_rep2_HepG2_batch16 ENCFF251CER HiSeq 2500 2017-02-04T00:39:05.925026+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV5gQ0369BJZqpFPF415z6 ENCSR356ECR https://www.encodeproject.org/experiments/ENCSR356ECR "transcription factor,RNA binding protein" RBM22-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF833PEG https://www.encodeproject.org/files/ENCFF833PEG/@@download/ENCFF833PEG.bam ENCFF469KKQ https://www.encodeproject.org/files/ENCFF469KKQ/@@download/ENCFF469KKQ.bam 99.1 M 0 80.3 M 0.810 SE 40 40 native 0.0 M 62.9 M 41.3 M 0.416 0.66 0.56 1.43 140 1.08 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/b7a8fec2-8c66-4965-a4fd-d2109517efbd/@@download/cross_correlation_plot/ENCFF587OZE-ENCFF924MON-ENCFF840RGL_pooled.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB475YTR xiang-dong-fu:L-RBM22_ChIP_rep1_HepG2_batch13 "ENCFF840RGL,ENCFF587OZE,ENCFF924MON" HiSeq 2000 2017-08-16T00:54:32.421397+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F69f3J003692kpZ7BQfBpZf5 ENCSR356ECR https://www.encodeproject.org/experiments/ENCSR356ECR "transcription factor,RNA binding protein" RBM22-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF696YYU https://www.encodeproject.org/files/ENCFF696YYU/@@download/ENCFF696YYU.bam ENCFF120ASJ https://www.encodeproject.org/files/ENCFF120ASJ/@@download/ENCFF120ASJ.bam 42.6 M 0 34.8 M 0.817 SE 40 40 native 0.0 M 27.2 M 25.3 M 0.593 0.94 0.94 16.70 140 1.10 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/20940f10-208e-4c12-a8bc-790c1096a9a4/@@download/cross_correlation_plot/ENCFF985NRQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB464NZY xiang-dong-fu:L-RBM22_ChIP_rep2_HepG2_batch13 ENCFF985NRQ HiSeq 2500 2017-08-15T22:59:42.663461+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F69f3Q003693j5q8BQJXpQG8 ENCSR258SXK https://www.encodeproject.org/experiments/ENCSR258SXK RNA binding protein SFPQ-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF054IKS https://www.encodeproject.org/files/ENCFF054IKS/@@download/ENCFF054IKS.bam ENCFF445ZGA https://www.encodeproject.org/files/ENCFF445ZGA/@@download/ENCFF445ZGA.bam 22.3 M 0 17.2 M 0.769 SE 40 40 native 0.0 M 13.2 M 12.6 M 0.567 0.96 0.96 25.28 120 1.02 1.31 https://www.encodeproject.org/chipseq-filter-quality-metrics/61fd5f0d-ff40-436b-939a-586632a2bb4c/@@download/cross_correlation_plot/ENCFF107VQU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB306RKG xiang-dong-fu:L-PSF_ChIP_rep1_HepG2_batch17 ENCFF107VQU HiSeq 2000 2017-02-04T00:56:30.040792+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV9380369200gbFPKvPyXQ ENCSR258SXK https://www.encodeproject.org/experiments/ENCSR258SXK RNA binding protein SFPQ-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF106SSM https://www.encodeproject.org/files/ENCFF106SSM/@@download/ENCFF106SSM.bam ENCFF039AZH https://www.encodeproject.org/files/ENCFF039AZH/@@download/ENCFF039AZH.bam 22.6 M 0 18.9 M 0.835 SE 40 40 native 0.0 M 14.7 M 13.6 M 0.602 0.93 0.93 14.86 125 1.02 1.26 https://www.encodeproject.org/chipseq-filter-quality-metrics/b3bbb8d2-d2c2-48b1-b458-bcd6d77d5823/@@download/cross_correlation_plot/ENCFF432RAR.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB764ORA xiang-dong-fu:L-PSF_ChIP_rep2_HepG2_batch17 ENCFF432RAR HiSeq 2000 2017-02-04T00:56:32.739302+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV9Bj0369PkX3JFQFq2BxZ ENCSR128IYN https://www.encodeproject.org/experiments/ENCSR128IYN "transcription factor,RNA binding protein" SNRNP70-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF247KKW https://www.encodeproject.org/files/ENCFF247KKW/@@download/ENCFF247KKW.bam ENCFF078YUN https://www.encodeproject.org/files/ENCFF078YUN/@@download/ENCFF078YUN.bam 29.5 M 0 17.9 M 0.608 SE 40 40 native 0.0 M 14.9 M 13.0 M 0.440 0.87 0.87 7.69 125 1.02 0.95 https://www.encodeproject.org/chipseq-filter-quality-metrics/e8593793-c56f-4b02-854d-c8a76ed48676/@@download/cross_correlation_plot/ENCFF809ESS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB412OGX xiang-dong-fu:L-SNRNP70_ChIP_rep1_HepG2_batch17 ENCFF809ESS HiSeq 2500 2017-02-04T01:25:06.818022+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVBQ00369P4VQpFPXJ7y5k ENCSR128IYN https://www.encodeproject.org/experiments/ENCSR128IYN "transcription factor,RNA binding protein" SNRNP70-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF046IYE https://www.encodeproject.org/files/ENCFF046IYE/@@download/ENCFF046IYE.bam ENCFF753WNJ https://www.encodeproject.org/files/ENCFF753WNJ/@@download/ENCFF753WNJ.bam 33.5 M 0 26.4 M 0.787 SE 40 40 native 0.0 M 22.0 M 16.1 M 0.480 0.73 0.73 3.51 120 1.02 0.91 https://www.encodeproject.org/chipseq-filter-quality-metrics/bd1e13d5-7d9a-4e1a-bdc1-d13bafdb4158/@@download/cross_correlation_plot/ENCFF566HIZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB200JXD xiang-dong-fu:L-SNRNP70_ChIP_rep2_HepG2_batch17 ENCFF566HIZ HiSeq 2500 2017-02-04T01:25:49.759963+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVBg00369200gbFPKvPyYP ENCSR465BWW https://www.encodeproject.org/experiments/ENCSR465BWW RNA binding protein SRSF1-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF026YWK https://www.encodeproject.org/files/ENCFF026YWK/@@download/ENCFF026YWK.bam ENCFF773ABR https://www.encodeproject.org/files/ENCFF773ABR/@@download/ENCFF773ABR.bam 31.5 M 0 17.1 M 0.544 SE 40 40 native 0.0 M 13.2 M 10.7 M 0.340 0.81 0.81 5.25 145 1.08 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/3753d3a0-3954-4f85-99b2-b807faf6b24e/@@download/cross_correlation_plot/ENCFF430RNA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB088EEH xiang-dong-fu:L-SRSF1_ChIP_rep1_HepG2_batch17 ENCFF430RNA HiSeq 2500 2017-02-04T00:47:41.781871+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV2x00369BJZqpFPF415vy ENCSR465BWW https://www.encodeproject.org/experiments/ENCSR465BWW RNA binding protein SRSF1-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF907KLT https://www.encodeproject.org/files/ENCFF907KLT/@@download/ENCFF907KLT.bam ENCFF707YKE https://www.encodeproject.org/files/ENCFF707YKE/@@download/ENCFF707YKE.bam 29.2 M 0 22.7 M 0.777 SE 40 40 native 0.0 M 17.6 M 10.5 M 0.360 0.60 0.58 2.28 140 1.06 1.34 https://www.encodeproject.org/chipseq-filter-quality-metrics/3417e220-352f-49f8-97ff-443aeb4f8364/@@download/cross_correlation_plot/ENCFF044ACD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB662QGZ xiang-dong-fu:L-SRSF1_ChIP_rep2_HepG2_batch17 ENCFF044ACD HiSeq 2000 2017-02-04T00:54:38.435434+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV36j03696V163FPx4zjQZ ENCSR893LEC https://www.encodeproject.org/experiments/ENCSR893LEC "transcription factor,RNA binding protein" SRSF3-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF868RJN https://www.encodeproject.org/files/ENCFF868RJN/@@download/ENCFF868RJN.bam ENCFF429SDG https://www.encodeproject.org/files/ENCFF429SDG/@@download/ENCFF429SDG.bam 23.0 M 0 15.3 M 0.663 SE 40 None 0.0 M 11.2 M 3.1 M 0.133 0.45 0.42 1.70 140 1.15 1.89 https://www.encodeproject.org/chipseq-filter-quality-metrics/27b2568f-812c-41d7-bb3f-d0752a23f091/@@download/cross_correlation_plot/ENCFF582HLF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB810LCD xiang-dong-fu:L-SRSF3_rep1_HepG2_Batch3 ENCFF582HLF HiSeq 2000 2016-06-25T05:27:50.894793+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxGJ0036960jj23bp11Bgb ENCSR893LEC https://www.encodeproject.org/experiments/ENCSR893LEC "transcription factor,RNA binding protein" SRSF3-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF461HWX https://www.encodeproject.org/files/ENCFF461HWX/@@download/ENCFF461HWX.bam ENCFF852WGM https://www.encodeproject.org/files/ENCFF852WGM/@@download/ENCFF852WGM.bam 23.9 M 0 16.3 M 0.682 SE 40 None 0.0 M 12.3 M 3.1 M 0.130 0.42 0.40 1.68 145 1.13 1.76 https://www.encodeproject.org/chipseq-filter-quality-metrics/b060ba12-74f6-463d-9af7-f415a31697be/@@download/cross_correlation_plot/ENCFF903TVN.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB162SGY xiang-dong-fu:L-SRSF3_rep2_HepG2_Batch3 ENCFF903TVN HiSeq 2000 2016-06-25T05:28:14.970045+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxGPQ03693Zb4P6xpxxf9J ENCSR868JLS https://www.encodeproject.org/experiments/ENCSR868JLS "transcription factor,RNA binding protein" U2AF1-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF740GLK https://www.encodeproject.org/files/ENCFF740GLK/@@download/ENCFF740GLK.bam ENCFF045AXJ https://www.encodeproject.org/files/ENCFF045AXJ/@@download/ENCFF045AXJ.bam 32.4 M 0 23.1 M 0.712 SE 40 40 native 0.0 M 17.6 M 15.8 M 0.488 0.90 0.90 9.98 120 1.05 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/5f1a4f13-dbf2-4f4b-913e-079eeb755d5e/@@download/cross_correlation_plot/ENCFF586AFS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB699EGM xiang-dong-fu:L-U2AF1_ChIP_rep1_HepG2_batch17 ENCFF586AFS HiSeq 2500 2017-02-04T00:46:06.939326+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQqxQ0369BJZqpFPF415p2 ENCSR868JLS https://www.encodeproject.org/experiments/ENCSR868JLS "transcription factor,RNA binding protein" U2AF1-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF881XYD https://www.encodeproject.org/files/ENCFF881XYD/@@download/ENCFF881XYD.bam ENCFF546DJZ https://www.encodeproject.org/files/ENCFF546DJZ/@@download/ENCFF546DJZ.bam 25.5 M 0 21.1 M 0.829 SE 40 40 native 0.0 M 16.3 M 13.4 M 0.525 0.82 0.82 5.36 135 1.04 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/7d8540b5-b310-4efb-be31-e1242a4e9cb1/@@download/cross_correlation_plot/ENCFF210EIU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB032RZA xiang-dong-fu:L-U2AF1_ChIP_rep2_HepG2_batch17 ENCFF210EIU HiSeq 2500 2017-02-04T00:44:49.450605+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQvG00369PkX3JFQFq2Bb2 ENCSR991ADX https://www.encodeproject.org/experiments/ENCSR991ADX "transcription factor,RNA binding protein" U2AF2-human HepG2 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF641AUO https://www.encodeproject.org/files/ENCFF641AUO/@@download/ENCFF641AUO.bam ENCFF182MUR https://www.encodeproject.org/files/ENCFF182MUR/@@download/ENCFF182MUR.bam 26.5 M 0 17.8 M 0.672 SE 40 40 native 0.0 M 13.7 M 12.5 M 0.473 0.91 0.92 11.71 115 1.04 1.40 https://www.encodeproject.org/chipseq-filter-quality-metrics/e7f627b2-9440-4cb9-b128-d58c230bd496/@@download/cross_correlation_plot/ENCFF465JVB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB297BUH xiang-dong-fu:L-U2AF2_ChIP_rep1_HepG2_batch17 ENCFF465JVB HiSeq 2500 2017-02-04T00:50:26.745854+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV64003693kZj85jYX6Vq6 ENCSR991ADX https://www.encodeproject.org/experiments/ENCSR991ADX "transcription factor,RNA binding protein" U2AF2-human HepG2 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF883UWI https://www.encodeproject.org/files/ENCFF883UWI/@@download/ENCFF883UWI.bam ENCFF029QUB https://www.encodeproject.org/files/ENCFF029QUB/@@download/ENCFF029QUB.bam 28.2 M 0 22.9 M 0.814 SE 40 40 native 0.0 M 17.9 M 14.7 M 0.523 0.83 0.82 5.55 125 1.03 1.50 https://www.encodeproject.org/chipseq-filter-quality-metrics/153eb2f9-df1e-4953-9ee4-9499146cf1e2/@@download/cross_correlation_plot/ENCFF194KNQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB447UUR xiang-dong-fu:L-U2AF2_ChIP_rep2_HepG2_batch17 ENCFF194KNQ HiSeq 2500 2017-02-04T01:02:53.922160+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV6Q00369F13JyFQ4qV7z7 ENCSR641BSL https://www.encodeproject.org/experiments/ENCSR641BSL "transcription factor,RNA binding protein" AGO1-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF360QAB https://www.encodeproject.org/files/ENCFF360QAB/@@download/ENCFF360QAB.bam ENCFF502HMU https://www.encodeproject.org/files/ENCFF502HMU/@@download/ENCFF502HMU.bam 35.1 M 0 23.5 M 0.668 SE 40 40 native 0.0 M 19.3 M 13.2 M 0.375 0.69 0.68 3.11 135 1.18 1.25 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce319af8-5a82-4a08-8991-aeef2350ec0b/@@download/cross_correlation_plot/ENCFF994KPK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB013LPN xiang-dong-fu:L-AGO1_ChIP_rep1_K562_batch10 ENCFF994KPK HiSeq 2500 2017-02-04T00:46:56.296475+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQvfj03696V163FPx4zjJB ENCSR641BSL https://www.encodeproject.org/experiments/ENCSR641BSL "transcription factor,RNA binding protein" AGO1-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF471TDC https://www.encodeproject.org/files/ENCFF471TDC/@@download/ENCFF471TDC.bam ENCFF188QXQ https://www.encodeproject.org/files/ENCFF188QXQ/@@download/ENCFF188QXQ.bam 32.3 M 0 23.4 M 0.724 SE 40 40 native 0.0 M 19.2 M 11.5 M 0.354 0.60 0.58 2.27 130 1.16 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/b56bde27-04b5-4c74-a9e0-cadb89143cac/@@download/cross_correlation_plot/ENCFF836CBD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB406WJW xiang-dong-fu:L-AGO1_ChIP_rep2_K562_batch10 ENCFF836CBD HiSeq 2500 2017-02-04T00:42:05.498637+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQx400369P4VQpFPXJ7xzJ ENCSR084AIG https://www.encodeproject.org/experiments/ENCSR084AIG control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF120YSP https://www.encodeproject.org/files/ENCFF120YSP/@@download/ENCFF120YSP.bam ENCFF814YFG https://www.encodeproject.org/files/ENCFF814YFG/@@download/ENCFF814YFG.bam 53.1 M 0 50.3 M 0.947 SE 40 None 0.0 M 41.5 M 40.4 M 0.760 0.98 0.98 46.74 105 1.02 1.74 https://www.encodeproject.org/chipseq-filter-quality-metrics/2e20e0f7-bf27-4413-945e-c6f9a20bb083/@@download/cross_correlation_plot/ENCFF577LLL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB628FLS xiang-dong-fu:L-input_Control_rep1_K562_batch5 ENCFF577LLL HiSeq 2000 2016-05-06T18:14:46.273015+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvjGQ0369J31Q0Pkv5xpGJ ENCSR084AIG https://www.encodeproject.org/experiments/ENCSR084AIG control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF906SAI https://www.encodeproject.org/files/ENCFF906SAI/@@download/ENCFF906SAI.bam ENCFF560NTV https://www.encodeproject.org/files/ENCFF560NTV/@@download/ENCFF560NTV.bam 59.9 M 0 56.6 M 0.945 SE 40 None 0.0 M 46.3 M 44.9 M 0.750 0.97 0.97 39.94 100 1.02 1.73 https://www.encodeproject.org/chipseq-filter-quality-metrics/23d1efb9-d795-4a79-96de-d5b01581758b/@@download/cross_correlation_plot/ENCFF363JFD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB580EBG xiang-dong-fu:L-input_Control_rep2_K562_batch5 ENCFF363JFD HiSeq 2000 2016-05-06T18:15:26.276395+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfvjK80369J04b0ZkqXbZ64 ENCSR331OJY https://www.encodeproject.org/experiments/ENCSR331OJY control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF936VXD https://www.encodeproject.org/files/ENCFF936VXD/@@download/ENCFF936VXD.bam ENCFF848AQB https://www.encodeproject.org/files/ENCFF848AQB/@@download/ENCFF848AQB.bam 30.5 M 0 29.1 M 0.954 SE 40 40 None 0.0 M 23.7 M 23.3 M 0.766 0.99 0.99 84.41 90 1.02 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/2587300a-b45e-4025-a591-21a1567042fb/@@download/cross_correlation_plot/ENCFF833ZOA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB794RWU xiang-dong-fu:L-input_Control_rep1_K562_batch8 ENCFF833ZOA HiSeq 2000 2016-05-06T18:13:13.536196+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx1400369Fqzv9B81X79v7 ENCSR331OJY https://www.encodeproject.org/experiments/ENCSR331OJY control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF092OEQ https://www.encodeproject.org/files/ENCFF092OEQ/@@download/ENCFF092OEQ.bam ENCFF323AVQ https://www.encodeproject.org/files/ENCFF323AVQ/@@download/ENCFF323AVQ.bam 44.3 M 0 42.3 M 0.954 SE 40 40 None 0.0 M 34.3 M 33.5 M 0.756 0.98 0.98 63.02 100 1.02 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/bf4b4c10-8660-42c0-90ee-00ea2c509834/@@download/cross_correlation_plot/ENCFF183RWB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB352FLT xiang-dong-fu:L-input_Control_rep2_K562_batch8 ENCFF183RWB HiSeq 2000 2016-05-06T18:14:11.434128+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx1600369J31Q0Pkv5xpXp ENCSR397ZZR https://www.encodeproject.org/experiments/ENCSR397ZZR control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF554LOM https://www.encodeproject.org/files/ENCFF554LOM/@@download/ENCFF554LOM.bam ENCFF965IQY https://www.encodeproject.org/files/ENCFF965IQY/@@download/ENCFF965IQY.bam 50.5 M 0 47.2 M 0.934 SE 40 40 None 0.0 M 38.6 M 37.7 M 0.746 0.98 0.98 57.71 90 1.02 1.98 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6cdda46-f9ce-499c-8c92-6bfbda8d6fee/@@download/cross_correlation_plot/ENCFF513NDA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB856QUB xiang-dong-fu:L-input_Control_rep1_K562_batch6 ENCFF513NDA HiSeq 2000 2016-05-06T18:13:09.177050+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx1x8036960jj23bp11BPF ENCSR397ZZR https://www.encodeproject.org/experiments/ENCSR397ZZR control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF926NUN https://www.encodeproject.org/files/ENCFF926NUN/@@download/ENCFF926NUN.bam ENCFF732PHN https://www.encodeproject.org/files/ENCFF732PHN/@@download/ENCFF732PHN.bam 55.4 M 0 51.6 M 0.930 SE 40 40 None 0.0 M 41.9 M 40.9 M 0.738 0.98 0.98 51.24 90 1.02 1.97 https://www.encodeproject.org/chipseq-filter-quality-metrics/e97ce8f5-9e36-4014-8c73-b673de115d65/@@download/cross_correlation_plot/ENCFF744ZJK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB327RPK xiang-dong-fu:L-input_Control_rep2_K562_batch6 ENCFF744ZJK HiSeq 2000 2016-05-06T18:13:54.169489+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx1z003698YQ49Xb7p2bby ENCSR436OZQ https://www.encodeproject.org/experiments/ENCSR436OZQ control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF661ZRO https://www.encodeproject.org/files/ENCFF661ZRO/@@download/ENCFF661ZRO.bam ENCFF897DGW https://www.encodeproject.org/files/ENCFF897DGW/@@download/ENCFF897DGW.bam 42.5 M 0 40.3 M 0.949 SE 40 40 native 0.0 M 32.8 M 32.2 M 0.757 0.98 0.98 66.15 105 1.01 1.51 https://www.encodeproject.org/chipseq-filter-quality-metrics/86aa4e74-bf95-4a6f-926f-e538f839b101/@@download/cross_correlation_plot/ENCFF089EYX.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB704EMG xiang-dong-fu:L-input_Control_rep1_K562_batch9 ENCFF089EYX HiSeq 2500 2017-02-08T18:22:11.996389+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5QGj036988x5jFzyv5ZX6 ENCSR436OZQ https://www.encodeproject.org/experiments/ENCSR436OZQ control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF872FDX https://www.encodeproject.org/files/ENCFF872FDX/@@download/ENCFF872FDX.bam ENCFF037EWV https://www.encodeproject.org/files/ENCFF037EWV/@@download/ENCFF037EWV.bam 45.6 M 0 43.1 M 0.944 SE 40 40 native 0.0 M 35.1 M 34.5 M 0.755 0.98 0.98 61.61 95 1.01 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/708cbbad-f537-430f-83e1-724f07497b75/@@download/cross_correlation_plot/ENCFF419XJY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB753FQL xiang-dong-fu:L-input_Control_rep2_K562_batch9 ENCFF419XJY HiSeq 2500 2017-02-08T18:22:12.058835+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5QYQ03698Y174Fz56kgQj ENCSR440JAU https://www.encodeproject.org/experiments/ENCSR440JAU control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF836GUS https://www.encodeproject.org/files/ENCFF836GUS/@@download/ENCFF836GUS.bam ENCFF663BEB https://www.encodeproject.org/files/ENCFF663BEB/@@download/ENCFF663BEB.bam 45.3 M 0 42.0 M 0.927 SE 40 40 None 0.0 M 35.0 M 33.8 M 0.746 0.97 0.97 37.11 90 1.02 1.87 https://www.encodeproject.org/chipseq-filter-quality-metrics/7446122e-d0a3-40c1-b28f-33ae106b7cd9/@@download/cross_correlation_plot/ENCFF317LUD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB366AWQ xiang-dong-fu:L-input_Control_rep1_K562_batch2 ENCFF317LUD HiSeq 2000 2016-05-06T18:12:59.978903+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx2pQ0369J04b0ZkqXbZG2 ENCSR440JAU https://www.encodeproject.org/experiments/ENCSR440JAU control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF345ODV https://www.encodeproject.org/files/ENCFF345ODV/@@download/ENCFF345ODV.bam ENCFF375EPE https://www.encodeproject.org/files/ENCFF375EPE/@@download/ENCFF375EPE.bam 45.5 M 0 42.0 M 0.924 SE 40 40 None 0.0 M 34.8 M 33.8 M 0.743 0.97 0.97 40.16 95 1.02 1.85 https://www.encodeproject.org/chipseq-filter-quality-metrics/4e089d6b-328c-4ee0-908a-8a2d9e9da304/@@download/cross_correlation_plot/ENCFF338QTL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB061FSK xiang-dong-fu:L-input_Control_rep2_K562_batch2 ENCFF338QTL HiSeq 2000 2016-05-06T18:12:40.514541+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx2vj03698YQ49Xb7p2bg8 ENCSR457PLC https://www.encodeproject.org/experiments/ENCSR457PLC control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF102RVF https://www.encodeproject.org/files/ENCFF102RVF/@@download/ENCFF102RVF.bam ENCFF658TYW https://www.encodeproject.org/files/ENCFF658TYW/@@download/ENCFF658TYW.bam 39.8 M 0 37.6 M 0.944 SE 40 40 None 0.0 M 31.5 M 30.8 M 0.774 0.98 0.98 56.20 100 1.02 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/31f422bf-f98d-4126-bfd4-4acca6f8a6d6/@@download/cross_correlation_plot/ENCFF911KYO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB862QBG xiang-dong-fu:L-input_Control_rep1_K562_batch4 ENCFF911KYO HiSeq 2000 2016-05-06T18:12:46.541262+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx3600369J04b0ZkqXbZGg ENCSR457PLC https://www.encodeproject.org/experiments/ENCSR457PLC control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF438FAN https://www.encodeproject.org/files/ENCFF438FAN/@@download/ENCFF438FAN.bam ENCFF386XET https://www.encodeproject.org/files/ENCFF386XET/@@download/ENCFF386XET.bam 39.6 M 0 37.5 M 0.946 SE 40 40 None 0.0 M 31.1 M 30.4 M 0.767 0.98 0.98 57.01 90 1.02 2.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/35ca6800-322e-470a-80b3-4d4c4d15eb99/@@download/cross_correlation_plot/ENCFF113ZAT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB728UXM xiang-dong-fu:L-input_Control_rep2_K562_batch4 ENCFF113ZAT HiSeq 2000 2016-05-06T18:12:17.863093+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx3800369J31Q0Pkv5xpZk ENCSR464FDA https://www.encodeproject.org/experiments/ENCSR464FDA control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF388TPI https://www.encodeproject.org/files/ENCFF388TPI/@@download/ENCFF388TPI.bam ENCFF180IWG https://www.encodeproject.org/files/ENCFF180IWG/@@download/ENCFF180IWG.bam 87.5 M 0 68.0 M 0.778 SE 40 40 None 0.0 M 54.7 M 53.0 M 0.606 0.98 0.98 49.23 100 1.02 1.75 https://www.encodeproject.org/chipseq-filter-quality-metrics/4db4afdc-6efe-4225-97d1-ebc8effad3bc/@@download/cross_correlation_plot/ENCFF331RXU.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB387XIP xiang-dong-fu:L-input_Control_rep1_K562_batch7 ENCFF331RXU HiSeq 2000 2016-05-06T18:14:31.530915+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx3F00369J04b0ZkqXbZJ0 ENCSR464FDA https://www.encodeproject.org/experiments/ENCSR464FDA control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF248LWZ https://www.encodeproject.org/files/ENCFF248LWZ/@@download/ENCFF248LWZ.bam ENCFF036CVA https://www.encodeproject.org/files/ENCFF036CVA/@@download/ENCFF036CVA.bam 99.9 M 0 77.8 M 0.779 SE 40 40 None 0.0 M 62.6 M 60.4 M 0.604 0.97 0.98 41.41 100 1.03 1.79 https://www.encodeproject.org/chipseq-filter-quality-metrics/71488e74-42ca-46f3-af7f-2ab299fe0ccb/@@download/cross_correlation_plot/ENCFF318ZTK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB749CPZ xiang-dong-fu:L-input_Control_rep2_K562_batch7 ENCFF318ZTK HiSeq 2000 2016-05-06T18:14:37.297604+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx3J0036960jj23bp11BVF ENCSR483GYO https://www.encodeproject.org/experiments/ENCSR483GYO control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF092OLM https://www.encodeproject.org/files/ENCFF092OLM/@@download/ENCFF092OLM.bam ENCFF599SJC https://www.encodeproject.org/files/ENCFF599SJC/@@download/ENCFF599SJC.bam 42.9 M 0 40.3 M 0.938 SE 40 40 None 0.0 M 33.2 M 32.4 M 0.755 0.98 0.98 55.04 90 1.02 2.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/957471f1-be5f-4979-a392-092a72e0f5f9/@@download/cross_correlation_plot/ENCFF521UDO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB577DLO xiang-dong-fu:L-input_Control_rep1_K562_batch3 ENCFF521UDO HiSeq 2000 2016-05-06T18:12:17.486150+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx3bj0369J04b0ZkqXbZJG ENCSR483GYO https://www.encodeproject.org/experiments/ENCSR483GYO control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF584ERB https://www.encodeproject.org/files/ENCFF584ERB/@@download/ENCFF584ERB.bam ENCFF473DJD https://www.encodeproject.org/files/ENCFF473DJD/@@download/ENCFF473DJD.bam 46.0 M 0 42.9 M 0.934 SE 40 40 None 0.0 M 35.1 M 34.3 M 0.746 0.98 0.98 53.52 85 1.02 2.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/0422c99c-caf8-41ca-8eeb-e5bfb6f0dc2b/@@download/cross_correlation_plot/ENCFF343MYT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB403RJU xiang-dong-fu:L-input_Control_rep2_K562_batch3 ENCFF343MYT HiSeq 2000 2016-05-06T18:12:10.082850+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx3gj03693Zb4P6xpxxf4g ENCSR814UCX https://www.encodeproject.org/experiments/ENCSR814UCX control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF819KWY https://www.encodeproject.org/files/ENCFF819KWY/@@download/ENCFF819KWY.bam ENCFF282EIV https://www.encodeproject.org/files/ENCFF282EIV/@@download/ENCFF282EIV.bam 46.3 M 0 42.8 M 0.926 SE 40 None 0.0 M 35.3 M 34.2 M 0.740 0.97 0.98 42.84 100 1.01 1.77 https://www.encodeproject.org/chipseq-filter-quality-metrics/f1e24e18-3639-4d2f-a57a-67c9f9686231/@@download/cross_correlation_plot/ENCFF439OMO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB184UCF xiang-dong-fu:L-input_Control_rep1_K562_batch1 ENCFF439OMO HiSeq 2000 2016-05-06T18:03:56.766207+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxBF803698YQ49Xb7p2bqq ENCSR814UCX https://www.encodeproject.org/experiments/ENCSR814UCX control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF375ZQH https://www.encodeproject.org/files/ENCFF375ZQH/@@download/ENCFF375ZQH.bam ENCFF274SSL https://www.encodeproject.org/files/ENCFF274SSL/@@download/ENCFF274SSL.bam 42.1 M 0 38.5 M 0.917 SE 40 None 0.0 M 32.1 M 31.0 M 0.738 0.97 0.97 36.18 100 1.01 1.88 https://www.encodeproject.org/chipseq-filter-quality-metrics/664c142d-4847-49d3-a277-c78166c96e29/@@download/cross_correlation_plot/ENCFF087SCF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB003INL xiang-dong-fu:L-input_Control_rep2_K562_batch1 ENCFF087SCF HiSeq 2000 2016-05-06T18:03:32.144884+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxBJ003693Zb4P6xpxxf8f ENCSR932KYH https://www.encodeproject.org/experiments/ENCSR932KYH control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF721LZU https://www.encodeproject.org/files/ENCFF721LZU/@@download/ENCFF721LZU.bam ENCFF901PZK https://www.encodeproject.org/files/ENCFF901PZK/@@download/ENCFF901PZK.bam 45.3 M 0 43.1 M 0.951 SE 40 40 native 0.0 M 34.3 M 33.7 M 0.745 0.99 0.99 88.59 100 1.01 1.56 https://www.encodeproject.org/chipseq-filter-quality-metrics/ba8209eb-e157-478a-ab1a-2651e40f2477/@@download/cross_correlation_plot/ENCFF510UAH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB609FIR xiang-dong-fu:L-input_Control_rep1_K562_batch10 ENCFF510UAH HiSeq 2500 2017-02-08T18:26:10.208885+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5Py80369Jfvx1Fz8Y14y7 ENCSR932KYH https://www.encodeproject.org/experiments/ENCSR932KYH control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF100PTE https://www.encodeproject.org/files/ENCFF100PTE/@@download/ENCFF100PTE.bam ENCFF087TOW https://www.encodeproject.org/files/ENCFF087TOW/@@download/ENCFF087TOW.bam 38.3 M 0 37.0 M 0.965 SE 40 40 native 0.0 M 29.6 M 29.1 M 0.760 0.99 0.99 100.28 95 1.01 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/10d6d890-4d82-4009-b218-6aaf3e759835/@@download/cross_correlation_plot/ENCFF092DDZ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB306ZJE xiang-dong-fu:L-input_Control_rep2_K562_batch10 ENCFF092DDZ HiSeq 2000 2017-02-08T18:22:03.402631+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5Q5003694vx9yFzjV3z01 ENCSR966DOU https://www.encodeproject.org/experiments/ENCSR966DOU control Control-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF308PSW https://www.encodeproject.org/files/ENCFF308PSW/@@download/ENCFF308PSW.bam ENCFF782IWR https://www.encodeproject.org/files/ENCFF782IWR/@@download/ENCFF782IWR.bam 33.0 M 0 30.1 M 0.912 SE 40 40 native 0.0 M 24.7 M 24.3 M 0.737 0.99 0.99 85.72 105 1.02 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/64f463e7-f6ca-48d4-99da-780a603205f7/@@download/cross_correlation_plot/ENCFF025UQF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB399ADI xiang-dong-fu:L-input_Control_rep1_K562_batch11 ENCFF025UQF HiSeq 2500 2017-02-08T18:25:36.399782+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5PPQ03693xb2YFbkyf35x ENCSR966DOU https://www.encodeproject.org/experiments/ENCSR966DOU control Control-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF198JCQ https://www.encodeproject.org/files/ENCFF198JCQ/@@download/ENCFF198JCQ.bam ENCFF852YOS https://www.encodeproject.org/files/ENCFF852YOS/@@download/ENCFF852YOS.bam 32.3 M 0 29.4 M 0.910 SE 40 40 native 0.0 M 24.2 M 23.7 M 0.735 0.99 0.99 83.31 100 1.02 1.29 https://www.encodeproject.org/chipseq-filter-quality-metrics/3ca82d98-aae6-4ffc-9033-90f5c810a7d9/@@download/cross_correlation_plot/ENCFF201ZVH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB200MVP xiang-dong-fu:L-input_Control_rep2_K562_batch11 ENCFF201ZVH HiSeq 2500 2017-02-08T18:25:37.395316+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2J5Pfj03696V163FPx50JG9 ENCSR030OKC https://www.encodeproject.org/experiments/ENCSR030OKC "transcription factor,RNA binding protein" DROSHA-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF824KAR https://www.encodeproject.org/files/ENCFF824KAR/@@download/ENCFF824KAR.bam ENCFF433EIA https://www.encodeproject.org/files/ENCFF433EIA/@@download/ENCFF433EIA.bam 14.2 M 0 10.9 M 0.772 SE 40 40 None 0.0 M 8.9 M 8.1 M 0.570 0.94 0.94 17.49 110 1.02 1.47 https://www.encodeproject.org/chipseq-filter-quality-metrics/005433a7-4cf5-43c6-a6c5-42668df8ef4c/@@download/cross_correlation_plot/ENCFF996PXA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB580NDM xiang-dong-fu:L-DROSHA_ChIP_rep1_K562_batch3 ENCFF996PXA HiSeq 2000 2016-06-25T05:31:58.602952+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvg1Q03693Zb4P6xpxxbx5 ENCSR030OKC https://www.encodeproject.org/experiments/ENCSR030OKC "transcription factor,RNA binding protein" DROSHA-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF569XLF https://www.encodeproject.org/files/ENCFF569XLF/@@download/ENCFF569XLF.bam ENCFF808VYI https://www.encodeproject.org/files/ENCFF808VYI/@@download/ENCFF808VYI.bam 14.9 M 0 12.1 M 0.811 SE 40 40 None 0.0 M 9.9 M 9.0 M 0.605 0.93 0.94 15.74 105 1.02 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/131422bf-74b0-4745-92a4-aa904e094815/@@download/cross_correlation_plot/ENCFF450WTQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB497DTX xiang-dong-fu:L-DROSHA_ChIP_rep2_K562_batch3 ENCFF450WTQ HiSeq 2000 2016-06-25T05:31:41.771921+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvg4003694Z7Qq04385682 ENCSR051DXE https://www.encodeproject.org/experiments/ENCSR051DXE "transcription factor,RNA binding protein" FUS-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF361MTW https://www.encodeproject.org/files/ENCFF361MTW/@@download/ENCFF361MTW.bam ENCFF188YBS https://www.encodeproject.org/files/ENCFF188YBS/@@download/ENCFF188YBS.bam 16.4 M 0 13.9 M 0.846 SE 40 40 native 0.0 M 11.5 M 11.1 M 0.677 0.97 0.97 33.52 120 1.03 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/e48379da-27b9-451e-8712-e86b10923d4e/@@download/cross_correlation_plot/ENCFF970NLP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB073NUM xiang-dong-fu:L-FUS_ChIP_rep1_K562_batch10 ENCFF970NLP HiSeq 2500 2017-02-04T00:32:11.785405+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV2780369F13JyFQ4qV7v2 ENCSR051DXE https://www.encodeproject.org/experiments/ENCSR051DXE "transcription factor,RNA binding protein" FUS-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF503JQK https://www.encodeproject.org/files/ENCFF503JQK/@@download/ENCFF503JQK.bam ENCFF826ECD https://www.encodeproject.org/files/ENCFF826ECD/@@download/ENCFF826ECD.bam 16.8 M 0 14.3 M 0.852 SE 40 40 native 0.0 M 11.9 M 11.4 M 0.676 0.96 0.96 26.66 115 1.02 1.27 https://www.encodeproject.org/chipseq-filter-quality-metrics/13af8375-4882-47dd-82c4-3d60663c9435/@@download/cross_correlation_plot/ENCFF761RTS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB979GRO xiang-dong-fu:L-FUS_ChIP_rep2_K562_batch10 ENCFF761RTS HiSeq 2500 2017-02-04T00:36:05.493653+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV2VQ0369P4VQpFPXJ7y1g ENCSR594BNR https://www.encodeproject.org/experiments/ENCSR594BNR "transcription factor,RNA binding protein" HNRNPL-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF026PAK https://www.encodeproject.org/files/ENCFF026PAK/@@download/ENCFF026PAK.bam ENCFF245TRX https://www.encodeproject.org/files/ENCFF245TRX/@@download/ENCFF245TRX.bam 22.7 M 0 18.9 M 0.831 SE 40 40 native 0.0 M 15.5 M 13.8 M 0.609 0.90 0.90 10.02 135 1.04 1.45 https://www.encodeproject.org/chipseq-filter-quality-metrics/1158f141-3d6e-49f8-8af1-eac056d4e40d/@@download/cross_correlation_plot/ENCFF972RFP.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB743KTG xiang-dong-fu:L-HNRNPL_ChIP_rep1_K562_batch9 ENCFF972RFP HiSeq 2500 2017-02-04T00:23:49.275283+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQf8Q0369G4xB0FzYqJx07 ENCSR594BNR https://www.encodeproject.org/experiments/ENCSR594BNR "transcription factor,RNA binding protein" HNRNPL-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF439AGS https://www.encodeproject.org/files/ENCFF439AGS/@@download/ENCFF439AGS.bam ENCFF336VGN https://www.encodeproject.org/files/ENCFF336VGN/@@download/ENCFF336VGN.bam 24.8 M 0 20.9 M 0.843 SE 40 40 native 0.0 M 17.2 M 14.4 M 0.580 0.84 0.84 6.14 135 1.03 1.24 https://www.encodeproject.org/chipseq-filter-quality-metrics/19b28012-c7ca-45ed-8e5a-357be9d8fda7/@@download/cross_correlation_plot/ENCFF698TRM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB034WJJ xiang-dong-fu:L-HNRNPL_ChIP_rep2_K562_batch9 ENCFF698TRM HiSeq 2500 2017-02-04T00:33:18.106231+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQfjQ0369JpqfkG09Vg4Pf ENCSR296MXW https://www.encodeproject.org/experiments/ENCSR296MXW "transcription factor,RNA binding protein" HNRNPUL1-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF275XJW https://www.encodeproject.org/files/ENCFF275XJW/@@download/ENCFF275XJW.bam ENCFF429WCK https://www.encodeproject.org/files/ENCFF429WCK/@@download/ENCFF429WCK.bam 45.7 M 0 30.6 M 0.669 SE 40 40 native 0.0 M 23.4 M 22.0 M 0.482 0.94 0.94 17.50 125 1.02 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/e0e33ae2-236a-4eba-bb35-0457473c7cd6/@@download/cross_correlation_plot/ENCFF738EEY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB950PVQ xiang-dong-fu:L-HNRNPUL1_ChIP_rep1_K562_batch11 ENCFF738EEY HiSeq 2500 2017-02-04T01:26:03.138693+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQkQ803696kqfy5v2b9FKX ENCSR296MXW https://www.encodeproject.org/experiments/ENCSR296MXW "transcription factor,RNA binding protein" HNRNPUL1-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF733RTM https://www.encodeproject.org/files/ENCFF733RTM/@@download/ENCFF733RTM.bam ENCFF293IAH https://www.encodeproject.org/files/ENCFF293IAH/@@download/ENCFF293IAH.bam 39.0 M 0 28.1 M 0.721 SE 40 40 native 0.0 M 21.7 M 19.8 M 0.509 0.92 0.92 11.91 140 1.02 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/309ee41e-6482-435d-a168-28ef70692a9b/@@download/cross_correlation_plot/ENCFF235VMD.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB080BTA xiang-dong-fu:L-HNRNPUL1_ChIP_rep2_K562_batch11 ENCFF235VMD HiSeq 2500 2017-02-04T01:04:30.515110+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQp10036904JQy7pPxxF0F ENCSR415TXN https://www.encodeproject.org/experiments/ENCSR415TXN "RNA binding protein,transcription factor" NONO-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF203MUO https://www.encodeproject.org/files/ENCFF203MUO/@@download/ENCFF203MUO.bam ENCFF535GLW https://www.encodeproject.org/files/ENCFF535GLW/@@download/ENCFF535GLW.bam 20.5 M 0 18.8 M 0.918 SE 40 40 None 0.0 M 15.8 M 12.0 M 0.587 0.76 0.76 4.08 150 1.06 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/35f7fce1-f03e-4e00-a851-0fb10727d708/@@download/cross_correlation_plot/ENCFF097RQE.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB310DYL xiang-dong-fu:L-NONO_ChIP_rep1_K562_batch8 ENCFF097RQE HiSeq 2000 2016-06-25T05:30:39.848523+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx2300369Fqzv9B81X79vk ENCSR415TXN https://www.encodeproject.org/experiments/ENCSR415TXN "RNA binding protein,transcription factor" NONO-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF618MHM https://www.encodeproject.org/files/ENCFF618MHM/@@download/ENCFF618MHM.bam ENCFF998EHO https://www.encodeproject.org/files/ENCFF998EHO/@@download/ENCFF998EHO.bam 17.5 M 0 16.2 M 0.922 SE 40 40 None 0.0 M 13.6 M 10.2 M 0.579 0.75 0.74 3.83 140 1.10 1.37 https://www.encodeproject.org/chipseq-filter-quality-metrics/78eb32dc-71c3-4eab-a977-fbc852026fc6/@@download/cross_correlation_plot/ENCFF924FSA.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB368NFP xiang-dong-fu:L-NONO_ChIP_rep2_K562_batch8 ENCFF924FSA HiSeq 2000 2016-06-25T05:30:43.728860+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx25Q0369J31Q0Pkv5xpYv ENCSR220YXI https://www.encodeproject.org/experiments/ENCSR220YXI "transcription factor,RNA binding protein" PRPF4-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF895DLK https://www.encodeproject.org/files/ENCFF895DLK/@@download/ENCFF895DLK.bam ENCFF596NRP https://www.encodeproject.org/files/ENCFF596NRP/@@download/ENCFF596NRP.bam 112.2 M 0 86.7 M 0.773 SE 40 40 native 0.0 M 71.7 M 10.4 M 0.093 0.15 0.31 3.29 140 1.06 1.10 https://www.encodeproject.org/chipseq-filter-quality-metrics/491a8514-14d0-443e-b63e-1400e584f9cd/@@download/cross_correlation_plot/ENCFF308HCL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB800ELT xiang-dong-fu:L-PRPF4_ChIP_rep1_K562_batch2 ENCFF308HCL HiSeq 2000 2017-03-06T20:22:40.860187+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2ykFg00369Jvq8g82Pv8QF9 ENCSR220YXI https://www.encodeproject.org/experiments/ENCSR220YXI "transcription factor,RNA binding protein" PRPF4-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF367OYT https://www.encodeproject.org/files/ENCFF367OYT/@@download/ENCFF367OYT.bam ENCFF691CZV https://www.encodeproject.org/files/ENCFF691CZV/@@download/ENCFF691CZV.bam 102.7 M 0 77.4 M 0.754 SE 40 40 native 0.0 M 63.8 M 9.2 M 0.090 0.15 0.24 2.60 165 1.09 1.18 https://www.encodeproject.org/chipseq-filter-quality-metrics/f6181835-0598-4476-a1a7-5467ecccb713/@@download/cross_correlation_plot/ENCFF486FVK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB316FFY xiang-dong-fu:L-PRPF4_ChIP_rep2_K562_batch2 ENCFF486FVK HiSeq 2000 2017-03-06T20:07:12.033632+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2ykGBj03691bJyz3gyjz2pq ENCSR948KMB https://www.encodeproject.org/experiments/ENCSR948KMB "transcription factor,RNA binding protein" PTBP1-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF525JGC https://www.encodeproject.org/files/ENCFF525JGC/@@download/ENCFF525JGC.bam ENCFF308JUD https://www.encodeproject.org/files/ENCFF308JUD/@@download/ENCFF308JUD.bam 17.3 M 0 14.1 M 0.816 SE 40 40 native 0.0 M 10.8 M 10.4 M 0.602 0.96 0.97 29.82 130 1.06 1.33 https://www.encodeproject.org/chipseq-filter-quality-metrics/33e9c42d-d885-4055-808b-a10a0232c73f/@@download/cross_correlation_plot/ENCFF605MPT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB807UGP xiang-dong-fu:L-PTBP1_ChIP_rep1_K562_batch10 ENCFF605MPT HiSeq 2500 2017-02-04T00:32:39.935537+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV13j03696V163FPx4zjKq ENCSR948KMB https://www.encodeproject.org/experiments/ENCSR948KMB "transcription factor,RNA binding protein" PTBP1-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF031YZL https://www.encodeproject.org/files/ENCFF031YZL/@@download/ENCFF031YZL.bam ENCFF262KWU https://www.encodeproject.org/files/ENCFF262KWU/@@download/ENCFF262KWU.bam 17.2 M 0 14.1 M 0.822 SE 40 40 native 0.0 M 10.9 M 10.3 M 0.602 0.95 0.95 21.16 130 1.06 1.35 https://www.encodeproject.org/chipseq-filter-quality-metrics/10a90054-7f4e-4055-bb46-e72d1fa97381/@@download/cross_correlation_plot/ENCFF233QNF.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB445GBP xiang-dong-fu:L-PTBP1_ChIP_rep2_K562_batch10 ENCFF233QNF HiSeq 2500 2017-02-04T00:32:31.923446+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV1K80369BJZqpFPF415vJ ENCSR822LBD https://www.encodeproject.org/experiments/ENCSR822LBD "transcription factor,RNA binding protein" RBFOX2-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF161VHM https://www.encodeproject.org/files/ENCFF161VHM/@@download/ENCFF161VHM.bam ENCFF520WLS https://www.encodeproject.org/files/ENCFF520WLS/@@download/ENCFF520WLS.bam 33.0 M 0 27.9 M 0.846 SE 40 40 native 0.0 M 23.9 M 14.6 M 0.440 0.61 0.69 3.62 175 2.90 1.22 https://www.encodeproject.org/chipseq-filter-quality-metrics/b0259b93-c022-4fb1-8c46-8dd4ecc4f38e/@@download/cross_correlation_plot/ENCFF150BYW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB516WEE xiang-dong-fu:L-RBFOX2_ChIP_rep1_K562_batch10 ENCFF150BYW HiSeq 2000 2017-02-04T00:13:37.358374+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQJ0j03698K796J5yq903J ENCSR822LBD https://www.encodeproject.org/experiments/ENCSR822LBD "transcription factor,RNA binding protein" RBFOX2-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF156OFZ https://www.encodeproject.org/files/ENCFF156OFZ/@@download/ENCFF156OFZ.bam ENCFF247OHX https://www.encodeproject.org/files/ENCFF247OHX/@@download/ENCFF247OHX.bam 39.2 M 0 33.8 M 0.862 SE 40 40 native 0.0 M 28.9 M 16.6 M 0.424 0.58 0.66 3.31 180 2.80 1.21 https://www.encodeproject.org/chipseq-filter-quality-metrics/f781005a-6216-4a39-8e91-bf484077a77c/@@download/cross_correlation_plot/ENCFF453JCJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB795JQX xiang-dong-fu:L-RBFOX2_ChIP_rep2_K562_batch10 ENCFF453JCJ HiSeq 2000 2017-02-04T00:16:22.265494+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQJv80369BPQK4BjKv2X85 ENCSR836COE https://www.encodeproject.org/experiments/ENCSR836COE "transcription factor,RNA binding protein" RBM17-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF049VYL https://www.encodeproject.org/files/ENCFF049VYL/@@download/ENCFF049VYL.bam ENCFF079CXP https://www.encodeproject.org/files/ENCFF079CXP/@@download/ENCFF079CXP.bam 19.4 M 0 15.9 M 0.822 SE 40 None 0.0 M 13.3 M 11.9 M 0.612 0.90 0.90 9.62 105 1.02 1.23 https://www.encodeproject.org/chipseq-filter-quality-metrics/70c3dc64-43b0-4e22-9021-2f5a028ca88a/@@download/cross_correlation_plot/ENCFF178ZJY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB652RKL xiang-dong-fu:L-RBM17_ChIP_rep1_K562_batch5 ENCFF178ZJY HiSeq 2000 2016-06-25T05:28:27.968208+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxBbQ03694Z7Qq043856f7 ENCSR836COE https://www.encodeproject.org/experiments/ENCSR836COE "transcription factor,RNA binding protein" RBM17-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF581TTB https://www.encodeproject.org/files/ENCFF581TTB/@@download/ENCFF581TTB.bam ENCFF681ZXP https://www.encodeproject.org/files/ENCFF681ZXP/@@download/ENCFF681ZXP.bam 20.1 M 0 15.4 M 0.767 SE 40 None 0.0 M 12.9 M 10.8 M 0.540 0.85 0.85 6.39 115 1.02 1.14 https://www.encodeproject.org/chipseq-filter-quality-metrics/b9248d48-0556-41ea-aab6-fd3bb4e1be74/@@download/cross_correlation_plot/ENCFF614UID.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB700KXU xiang-dong-fu:L-RBM17_ChIP_rep2_K562_batch5 ENCFF614UID HiSeq 2000 2016-06-25T05:28:28.435603+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/BxfxBgj03693gbZ2XvPBXK8K ENCSR647PJW https://www.encodeproject.org/experiments/ENCSR647PJW RNA binding protein SFPQ-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF742OVT https://www.encodeproject.org/files/ENCFF742OVT/@@download/ENCFF742OVT.bam ENCFF545PTK https://www.encodeproject.org/files/ENCFF545PTK/@@download/ENCFF545PTK.bam 30.9 M 0 25.4 M 0.822 SE 40 40 native 0.0 M 21.1 M 17.2 M 0.555 0.82 0.82 5.48 110 1.02 1.11 https://www.encodeproject.org/chipseq-filter-quality-metrics/9d7899f5-7ef4-4a0b-ba3a-8751b1fb75a4/@@download/cross_correlation_plot/ENCFF576NBS.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB717MRC xiang-dong-fu:L-PSF_ChIP_rep1_K562_batch9 ENCFF576NBS HiSeq 2000 2017-02-04T00:55:20.908453+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQz780369PkX3JFQFq2BfX ENCSR647PJW https://www.encodeproject.org/experiments/ENCSR647PJW RNA binding protein SFPQ-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF273BTT https://www.encodeproject.org/files/ENCFF273BTT/@@download/ENCFF273BTT.bam ENCFF084IPL https://www.encodeproject.org/files/ENCFF084IPL/@@download/ENCFF084IPL.bam 26.3 M 0 22.2 M 0.841 SE 40 40 native 0.0 M 18.4 M 14.1 M 0.535 0.77 0.77 4.14 -5 1.02 0.94 https://www.encodeproject.org/chipseq-filter-quality-metrics/b1fa86d3-3e1c-4993-b4e3-d47dc44544a9/@@download/cross_correlation_plot/ENCFF471RUL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB886YPJ xiang-dong-fu:L-PSF_ChIP_rep2_K562_batch9 ENCFF471RUL HiSeq 2000 2017-02-04T00:46:07.423043+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV0Y80369F13JyFQ4qV7qG ENCSR754ZHU https://www.encodeproject.org/experiments/ENCSR754ZHU "transcription factor,RNA binding protein" SNRNP70-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF157WFG https://www.encodeproject.org/files/ENCFF157WFG/@@download/ENCFF157WFG.bam ENCFF917XAY https://www.encodeproject.org/files/ENCFF917XAY/@@download/ENCFF917XAY.bam 25.2 M 0 20.4 M 0.808 SE 40 40 native 0.0 M 15.7 M 14.9 M 0.592 0.95 0.95 21.98 130 1.02 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/a461bd98-14dc-42d6-83b1-a5f7ebf88b8b/@@download/cross_correlation_plot/ENCFF110EDY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB980RBC xiang-dong-fu:L-SNRNP70_ChIP_rep1_K562_batch11 ENCFF110EDY HiSeq 2500 2017-02-04T00:39:49.210932+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQpP003695039PBXVGPgKQ ENCSR754ZHU https://www.encodeproject.org/experiments/ENCSR754ZHU "transcription factor,RNA binding protein" SNRNP70-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF157WFG https://www.encodeproject.org/files/ENCFF157WFG/@@download/ENCFF157WFG.bam ENCFF917XAY https://www.encodeproject.org/files/ENCFF917XAY/@@download/ENCFF917XAY.bam 25.2 M 0 20.4 M 0.808 SE 40 40 native 0.0 M 15.7 M 14.9 M 0.592 0.95 0.95 21.98 130 1.02 1.36 https://www.encodeproject.org/chipseq-filter-quality-metrics/a461bd98-14dc-42d6-83b1-a5f7ebf88b8b/@@download/cross_correlation_plot/ENCFF110EDY.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB980RBC xiang-dong-fu:L-SNRNP70_ChIP_rep1_K562_batch11 ENCFF110EDY HiSeq 2500 2017-02-04T00:39:49.210932+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQpP003695039PBXVGPgKQ ENCSR754ZHU https://www.encodeproject.org/experiments/ENCSR754ZHU "transcription factor,RNA binding protein" SNRNP70-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF372NDR https://www.encodeproject.org/files/ENCFF372NDR/@@download/ENCFF372NDR.bam ENCFF438HVZ https://www.encodeproject.org/files/ENCFF438HVZ/@@download/ENCFF438HVZ.bam 25.9 M 0 22.2 M 0.856 SE 40 40 native 0.0 M 17.2 M 16.0 M 0.615 0.93 0.93 14.53 135 1.02 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/440ac678-47a3-4250-8e43-8e549f2243e9/@@download/cross_correlation_plot/ENCFF466MIW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB827CGI xiang-dong-fu:L-SNRNP70_ChIP_rep2_K562_batch11 ENCFF466MIW HiSeq 2500 2017-02-04T00:46:05.855533+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQpp80369BJZqpFPF415k1 ENCSR754ZHU https://www.encodeproject.org/experiments/ENCSR754ZHU "transcription factor,RNA binding protein" SNRNP70-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF372NDR https://www.encodeproject.org/files/ENCFF372NDR/@@download/ENCFF372NDR.bam ENCFF438HVZ https://www.encodeproject.org/files/ENCFF438HVZ/@@download/ENCFF438HVZ.bam 25.9 M 0 22.2 M 0.856 SE 40 40 native 0.0 M 17.2 M 16.0 M 0.615 0.93 0.93 14.53 135 1.02 1.42 https://www.encodeproject.org/chipseq-filter-quality-metrics/440ac678-47a3-4250-8e43-8e549f2243e9/@@download/cross_correlation_plot/ENCFF466MIW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB827CGI xiang-dong-fu:L-SNRNP70_ChIP_rep2_K562_batch11 ENCFF466MIW HiSeq 2500 2017-02-04T00:46:05.855533+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQpp80369BJZqpFPF415k1 ENCSR832DMO https://www.encodeproject.org/experiments/ENCSR832DMO RNA binding protein SRSF1-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF159BGM https://www.encodeproject.org/files/ENCFF159BGM/@@download/ENCFF159BGM.bam ENCFF878EYI https://www.encodeproject.org/files/ENCFF878EYI/@@download/ENCFF878EYI.bam 26.8 M 0 18.3 M 0.684 SE 40 40 native 0.0 M 15.0 M 12.0 M 0.447 0.80 0.80 4.86 140 1.03 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d2ff5bd-9997-4396-a8a0-81353ba492aa/@@download/cross_correlation_plot/ENCFF214SOK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB236IXL xiang-dong-fu:L-SRSF1_ChIP_rep1_K562_batch11 ENCFF214SOK HiSeq 2000 2017-02-04T00:33:00.278010+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQjgj03697ggyQFvzB049q ENCSR832DMO https://www.encodeproject.org/experiments/ENCSR832DMO RNA binding protein SRSF1-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF159BGM https://www.encodeproject.org/files/ENCFF159BGM/@@download/ENCFF159BGM.bam ENCFF878EYI https://www.encodeproject.org/files/ENCFF878EYI/@@download/ENCFF878EYI.bam 26.8 M 0 18.3 M 0.684 SE 40 40 native 0.0 M 15.0 M 12.0 M 0.447 0.80 0.80 4.86 140 1.03 1.16 https://www.encodeproject.org/chipseq-filter-quality-metrics/6d2ff5bd-9997-4396-a8a0-81353ba492aa/@@download/cross_correlation_plot/ENCFF214SOK.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB236IXL xiang-dong-fu:L-SRSF1_ChIP_rep1_K562_batch11 ENCFF214SOK HiSeq 2000 2017-02-04T00:33:00.278010+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQjgj03697ggyQFvzB049q ENCSR832DMO https://www.encodeproject.org/experiments/ENCSR832DMO RNA binding protein SRSF1-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF702CFH https://www.encodeproject.org/files/ENCFF702CFH/@@download/ENCFF702CFH.bam ENCFF489HXX https://www.encodeproject.org/files/ENCFF489HXX/@@download/ENCFF489HXX.bam 28.7 M 0 22.9 M 0.797 SE 40 40 native 0.0 M 18.9 M 12.9 M 0.447 0.68 0.68 3.04 150 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c31234b-ed95-4b6b-929b-a7e07a63231a/@@download/cross_correlation_plot/ENCFF025BOT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB933JUT xiang-dong-fu:L-SRSF1_ChIP_rep2_K562_batch11 ENCFF025BOT HiSeq 2000 2017-02-04T00:41:36.913318+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQk3803696kqfy5v2b9FJg ENCSR832DMO https://www.encodeproject.org/experiments/ENCSR832DMO RNA binding protein SRSF1-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF702CFH https://www.encodeproject.org/files/ENCFF702CFH/@@download/ENCFF702CFH.bam ENCFF489HXX https://www.encodeproject.org/files/ENCFF489HXX/@@download/ENCFF489HXX.bam 28.7 M 0 22.9 M 0.797 SE 40 40 native 0.0 M 18.9 M 12.9 M 0.447 0.68 0.68 3.04 150 1.03 1.07 https://www.encodeproject.org/chipseq-filter-quality-metrics/5c31234b-ed95-4b6b-929b-a7e07a63231a/@@download/cross_correlation_plot/ENCFF025BOT.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB933JUT xiang-dong-fu:L-SRSF1_ChIP_rep2_K562_batch11 ENCFF025BOT HiSeq 2000 2017-02-04T00:41:36.913318+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQk3803696kqfy5v2b9FJg ENCSR268QIQ https://www.encodeproject.org/experiments/ENCSR268QIQ "transcription factor,RNA binding protein" SRSF3-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF893YRO https://www.encodeproject.org/files/ENCFF893YRO/@@download/ENCFF893YRO.bam ENCFF071IDD https://www.encodeproject.org/files/ENCFF071IDD/@@download/ENCFF071IDD.bam 12.5 M 0 10.5 M 0.840 SE 40 None 0.0 M 7.8 M 6.2 M 0.494 0.79 0.78 4.47 155 1.07 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/755cfc84-ebbf-4e3a-ab99-79e6bf9196f6/@@download/cross_correlation_plot/ENCFF137DST.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB789YNG xiang-dong-fu:L-SRSF3_ChIP_rep1_K562_batch4 ENCFF137DST HiSeq 2000 2016-06-25T05:30:47.935136+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvzxj03693Zb4P6xpxxf1b ENCSR268QIQ https://www.encodeproject.org/experiments/ENCSR268QIQ "transcription factor,RNA binding protein" SRSF3-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF893YRO https://www.encodeproject.org/files/ENCFF893YRO/@@download/ENCFF893YRO.bam ENCFF071IDD https://www.encodeproject.org/files/ENCFF071IDD/@@download/ENCFF071IDD.bam 12.5 M 0 10.5 M 0.840 SE 40 None 0.0 M 7.8 M 6.2 M 0.494 0.79 0.78 4.47 155 1.07 1.86 https://www.encodeproject.org/chipseq-filter-quality-metrics/755cfc84-ebbf-4e3a-ab99-79e6bf9196f6/@@download/cross_correlation_plot/ENCFF137DST.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB789YNG xiang-dong-fu:L-SRSF3_ChIP_rep1_K562_batch4 ENCFF137DST HiSeq 2000 2016-06-25T05:30:47.935136+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvzxj03693Zb4P6xpxxf1b ENCSR268QIQ https://www.encodeproject.org/experiments/ENCSR268QIQ "transcription factor,RNA binding protein" SRSF3-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF293OZD https://www.encodeproject.org/files/ENCFF293OZD/@@download/ENCFF293OZD.bam ENCFF243NSS https://www.encodeproject.org/files/ENCFF243NSS/@@download/ENCFF243NSS.bam 16.1 M 0 12.2 M 0.757 SE 40 None 0.0 M 9.4 M 6.7 M 0.414 0.72 0.70 3.22 150 1.06 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce8e0a4c-b41f-4567-b707-b2e5a8599e74/@@download/cross_correlation_plot/ENCFF614XZH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB857ZPP xiang-dong-fu:L-SRSF3_ChIP_rep2_K562_batch4 ENCFF614XZH HiSeq 2000 2016-06-25T05:30:26.964065+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx0080369J31Q0Pkv5xpVQ ENCSR268QIQ https://www.encodeproject.org/experiments/ENCSR268QIQ "transcription factor,RNA binding protein" SRSF3-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF293OZD https://www.encodeproject.org/files/ENCFF293OZD/@@download/ENCFF293OZD.bam ENCFF243NSS https://www.encodeproject.org/files/ENCFF243NSS/@@download/ENCFF243NSS.bam 16.1 M 0 12.2 M 0.757 SE 40 None 0.0 M 9.4 M 6.7 M 0.414 0.72 0.70 3.22 150 1.06 1.72 https://www.encodeproject.org/chipseq-filter-quality-metrics/ce8e0a4c-b41f-4567-b707-b2e5a8599e74/@@download/cross_correlation_plot/ENCFF614XZH.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB857ZPP xiang-dong-fu:L-SRSF3_ChIP_rep2_K562_batch4 ENCFF614XZH HiSeq 2000 2016-06-25T05:30:26.964065+00:00 released processing https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfx0080369J31Q0Pkv5xpVQ ENCSR222MYK https://www.encodeproject.org/experiments/ENCSR222MYK "transcription factor,RNA binding protein" SRSF7-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF440PPR https://www.encodeproject.org/files/ENCFF440PPR/@@download/ENCFF440PPR.bam ENCFF031UQD https://www.encodeproject.org/files/ENCFF031UQD/@@download/ENCFF031UQD.bam 22.7 M 0 18.9 M 0.832 SE 40 None 0.0 M 15.6 M 13.9 M 0.613 0.90 0.90 9.85 110 1.02 1.78 https://www.encodeproject.org/chipseq-filter-quality-metrics/607ea643-46c7-4a5b-abdd-352a7e71abe1/@@download/cross_correlation_plot/ENCFF161FHO.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB792HDG xiang-dong-fu:L-SRSF7_ChIP_rep1_K562_batch4 ENCFF161FHO HiSeq 2000 2016-06-25T05:31:25.843556+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvy3Q03694Z7Qq043856Gf ENCSR222MYK https://www.encodeproject.org/experiments/ENCSR222MYK "transcription factor,RNA binding protein" SRSF7-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF572MUD https://www.encodeproject.org/files/ENCFF572MUD/@@download/ENCFF572MUD.bam ENCFF716DBD https://www.encodeproject.org/files/ENCFF716DBD/@@download/ENCFF716DBD.bam 20.1 M 0 14.9 M 0.741 SE 40 None 0.0 M 12.3 M 10.4 M 0.518 0.85 0.85 6.59 145 1.02 1.44 https://www.encodeproject.org/chipseq-filter-quality-metrics/7f63b75d-6ee8-430c-9942-d8a816704420/@@download/cross_correlation_plot/ENCFF127HYV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB259WVW xiang-dong-fu:L-SRSF7_ChIP_rep2_K562_batch4 ENCFF127HYV HiSeq 2000 2016-06-25T05:31:25.211362+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/Bxfvy5j0369J31Q0Pkv5xpPP ENCSR047LSJ https://www.encodeproject.org/experiments/ENCSR047LSJ "transcription factor,RNA binding protein" TAF15-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF641OBF https://www.encodeproject.org/files/ENCFF641OBF/@@download/ENCFF641OBF.bam ENCFF974IYP https://www.encodeproject.org/files/ENCFF974IYP/@@download/ENCFF974IYP.bam 21.8 M 0 17.6 M 0.807 SE 40 40 native 0.0 M 13.7 M 11.7 M 0.537 0.86 0.86 6.85 140 1.04 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/30d8f285-68a5-40a7-a11d-a0a3c8c6efcf/@@download/cross_correlation_plot/ENCFF485IHI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB965PNJ xiang-dong-fu:L-TAF15_ChIP_rep1_K562_batch9 ENCFF485IHI HiSeq 2500 2017-02-04T00:41:10.994640+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV43j03696V163FPx4zjVK ENCSR047LSJ https://www.encodeproject.org/experiments/ENCSR047LSJ "transcription factor,RNA binding protein" TAF15-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF641OBF https://www.encodeproject.org/files/ENCFF641OBF/@@download/ENCFF641OBF.bam ENCFF974IYP https://www.encodeproject.org/files/ENCFF974IYP/@@download/ENCFF974IYP.bam 21.8 M 0 17.6 M 0.807 SE 40 40 native 0.0 M 13.7 M 11.7 M 0.537 0.86 0.86 6.85 140 1.04 1.96 https://www.encodeproject.org/chipseq-filter-quality-metrics/30d8f285-68a5-40a7-a11d-a0a3c8c6efcf/@@download/cross_correlation_plot/ENCFF485IHI.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB965PNJ xiang-dong-fu:L-TAF15_ChIP_rep1_K562_batch9 ENCFF485IHI HiSeq 2500 2017-02-04T00:41:10.994640+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV43j03696V163FPx4zjVK ENCSR047LSJ https://www.encodeproject.org/experiments/ENCSR047LSJ "transcription factor,RNA binding protein" TAF15-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF408GAN https://www.encodeproject.org/files/ENCFF408GAN/@@download/ENCFF408GAN.bam ENCFF408AOV https://www.encodeproject.org/files/ENCFF408AOV/@@download/ENCFF408AOV.bam 26.3 M 0 20.9 M 0.796 SE 40 40 native 0.0 M 16.5 M 12.4 M 0.471 0.75 0.75 3.81 155 1.02 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/32eb21ed-69bd-4f21-ac11-be3d1cf3c6fa/@@download/cross_correlation_plot/ENCFF676SIM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB059NBV xiang-dong-fu:L-TAF15_ChIP_rep2_K562_batch9 ENCFF676SIM HiSeq 2500 2017-02-04T00:56:45.537824+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV4GQ0369P4VQpFPXJ7y3Z ENCSR047LSJ https://www.encodeproject.org/experiments/ENCSR047LSJ "transcription factor,RNA binding protein" TAF15-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF408GAN https://www.encodeproject.org/files/ENCFF408GAN/@@download/ENCFF408GAN.bam ENCFF408AOV https://www.encodeproject.org/files/ENCFF408AOV/@@download/ENCFF408AOV.bam 26.3 M 0 20.9 M 0.796 SE 40 40 native 0.0 M 16.5 M 12.4 M 0.471 0.75 0.75 3.81 155 1.02 1.54 https://www.encodeproject.org/chipseq-filter-quality-metrics/32eb21ed-69bd-4f21-ac11-be3d1cf3c6fa/@@download/cross_correlation_plot/ENCFF676SIM.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB059NBV xiang-dong-fu:L-TAF15_ChIP_rep2_K562_batch9 ENCFF676SIM HiSeq 2500 2017-02-04T00:56:45.537824+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BV4GQ0369P4VQpFPXJ7y3Z ENCSR429XTR https://www.encodeproject.org/experiments/ENCSR429XTR "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF466OLG https://www.encodeproject.org/files/ENCFF466OLG/@@download/ENCFF466OLG.bam ENCFF468LRV https://www.encodeproject.org/files/ENCFF468LRV/@@download/ENCFF468LRV.bam 40.8 M 0 34.8 M 0.855 SE 40 40 native 0.0 M 24.9 M 11.0 M 0.271 0.87 0.88 7.97 135 1.09 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/93a7442d-9788-4f46-81ff-124dd5175f34/@@download/cross_correlation_plot/ENCFF983DFB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB583IXZ xiang-dong-fu:L-TDP43_ChIP_rep1_K562_batch10 ENCFF983DFB HiSeq 2000 2017-02-03T23:37:44.768730+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQ1Zj0369JpqfkG09Vg48y ENCSR429XTR https://www.encodeproject.org/experiments/ENCSR429XTR "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF466OLG https://www.encodeproject.org/files/ENCFF466OLG/@@download/ENCFF466OLG.bam ENCFF468LRV https://www.encodeproject.org/files/ENCFF468LRV/@@download/ENCFF468LRV.bam 40.8 M 0 34.8 M 0.855 SE 40 40 native 0.0 M 24.9 M 11.0 M 0.271 0.87 0.88 7.97 135 1.09 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/93a7442d-9788-4f46-81ff-124dd5175f34/@@download/cross_correlation_plot/ENCFF983DFB.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB583IXZ xiang-dong-fu:L-TDP43_ChIP_rep1_K562_batch10 ENCFF983DFB HiSeq 2000 2017-02-03T23:37:44.768730+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQ1Zj0369JpqfkG09Vg48y ENCSR429XTR https://www.encodeproject.org/experiments/ENCSR429XTR "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF682NGE https://www.encodeproject.org/files/ENCFF682NGE/@@download/ENCFF682NGE.bam ENCFF232QFN https://www.encodeproject.org/files/ENCFF232QFN/@@download/ENCFF232QFN.bam 42.5 M 0 36.6 M 0.860 SE 40 40 native 0.0 M 26.1 M 11.3 M 0.267 0.86 0.87 7.43 130 1.09 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/eee540f4-8838-4098-b161-4ffdffadf742/@@download/cross_correlation_plot/ENCFF590TBW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB303FFT xiang-dong-fu:L-TDP43_ChIP_rep2_K562_batch10 ENCFF590TBW HiSeq 2000 2017-02-03T23:39:37.635591+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQ29j0369JpqfkG09Vg497 ENCSR429XTR https://www.encodeproject.org/experiments/ENCSR429XTR "RNA binding protein,transcription factor" TARDBP-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF682NGE https://www.encodeproject.org/files/ENCFF682NGE/@@download/ENCFF682NGE.bam ENCFF232QFN https://www.encodeproject.org/files/ENCFF232QFN/@@download/ENCFF232QFN.bam 42.5 M 0 36.6 M 0.860 SE 40 40 native 0.0 M 26.1 M 11.3 M 0.267 0.86 0.87 7.43 130 1.09 1.30 https://www.encodeproject.org/chipseq-filter-quality-metrics/eee540f4-8838-4098-b161-4ffdffadf742/@@download/cross_correlation_plot/ENCFF590TBW.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB303FFT xiang-dong-fu:L-TDP43_ChIP_rep2_K562_batch10 ENCFF590TBW HiSeq 2000 2017-02-03T23:39:37.635591+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQ29j0369JpqfkG09Vg497 ENCSR690GUG https://www.encodeproject.org/experiments/ENCSR690GUG "transcription factor,RNA binding protein" U2AF1-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF010TVY https://www.encodeproject.org/files/ENCFF010TVY/@@download/ENCFF010TVY.bam ENCFF004KLH https://www.encodeproject.org/files/ENCFF004KLH/@@download/ENCFF004KLH.bam 30.1 M 0 19.9 M 0.662 SE 40 40 native 0.0 M 16.5 M 13.9 M 0.460 0.84 0.84 6.07 120 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/7701d522-f1fb-4d01-943e-27c96e3f9b56/@@download/cross_correlation_plot/ENCFF871VOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB163OJS xiang-dong-fu:L-U2AF1_ChIP_rep1_K562_batch11 ENCFF871VOL HiSeq 2500 2017-02-04T01:24:59.822070+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVF1j03697G42vFQVBFF4j ENCSR690GUG https://www.encodeproject.org/experiments/ENCSR690GUG "transcription factor,RNA binding protein" U2AF1-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF010TVY https://www.encodeproject.org/files/ENCFF010TVY/@@download/ENCFF010TVY.bam ENCFF004KLH https://www.encodeproject.org/files/ENCFF004KLH/@@download/ENCFF004KLH.bam 30.1 M 0 19.9 M 0.662 SE 40 40 native 0.0 M 16.5 M 13.9 M 0.460 0.84 0.84 6.07 120 1.03 1.17 https://www.encodeproject.org/chipseq-filter-quality-metrics/7701d522-f1fb-4d01-943e-27c96e3f9b56/@@download/cross_correlation_plot/ENCFF871VOL.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB163OJS xiang-dong-fu:L-U2AF1_ChIP_rep1_K562_batch11 ENCFF871VOL HiSeq 2500 2017-02-04T01:24:59.822070+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVF1j03697G42vFQVBFF4j ENCSR690GUG https://www.encodeproject.org/experiments/ENCSR690GUG "transcription factor,RNA binding protein" U2AF1-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF057SMG https://www.encodeproject.org/files/ENCFF057SMG/@@download/ENCFF057SMG.bam ENCFF542IUY https://www.encodeproject.org/files/ENCFF542IUY/@@download/ENCFF542IUY.bam 31.9 M 0 25.5 M 0.798 SE 40 40 native 0.0 M 21.2 M 15.3 M 0.479 0.72 0.71 3.37 130 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb1602e2-258c-4824-bdd7-55a5a5c517c6/@@download/cross_correlation_plot/ENCFF582GZQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB810UVG xiang-dong-fu:L-U2AF1_ChIP_rep2_K562_batch11 ENCFF582GZQ HiSeq 2500 2017-02-04T01:25:13.124465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVFBQ0369200gbFPKvPyYy ENCSR690GUG https://www.encodeproject.org/experiments/ENCSR690GUG "transcription factor,RNA binding protein" U2AF1-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF057SMG https://www.encodeproject.org/files/ENCFF057SMG/@@download/ENCFF057SMG.bam ENCFF542IUY https://www.encodeproject.org/files/ENCFF542IUY/@@download/ENCFF542IUY.bam 31.9 M 0 25.5 M 0.798 SE 40 40 native 0.0 M 21.2 M 15.3 M 0.479 0.72 0.71 3.37 130 1.03 1.06 https://www.encodeproject.org/chipseq-filter-quality-metrics/cb1602e2-258c-4824-bdd7-55a5a5c517c6/@@download/cross_correlation_plot/ENCFF582GZQ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB810UVG xiang-dong-fu:L-U2AF1_ChIP_rep2_K562_batch11 ENCFF582GZQ HiSeq 2500 2017-02-04T01:25:13.124465+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BVFBQ0369200gbFPKvPyYy ENCSR479QAJ https://www.encodeproject.org/experiments/ENCSR479QAJ "transcription factor,RNA binding protein" U2AF2-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF762TAN https://www.encodeproject.org/files/ENCFF762TAN/@@download/ENCFF762TAN.bam ENCFF762SBP https://www.encodeproject.org/files/ENCFF762SBP/@@download/ENCFF762SBP.bam 18.8 M 0 12.9 M 0.686 SE 40 40 native 0.0 M 10.8 M 10.1 M 0.538 0.94 0.94 16.45 115 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/37662cab-af2c-4653-b2f0-cdb20e076ce4/@@download/cross_correlation_plot/ENCFF246FAV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB067MHI xiang-dong-fu:L-U2AF2_ChIP_rep1_K562_batch11 ENCFF246FAV HiSeq 2000 2017-02-04T00:35:59.117586+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQyJQ0369PkX3JFQFq2Bbz ENCSR479QAJ https://www.encodeproject.org/experiments/ENCSR479QAJ "transcription factor,RNA binding protein" U2AF2-human K562 immortalized cell line 1 xiang-dong-fu ENCODE3 GRCh38 ENCFF762TAN https://www.encodeproject.org/files/ENCFF762TAN/@@download/ENCFF762TAN.bam ENCFF762SBP https://www.encodeproject.org/files/ENCFF762SBP/@@download/ENCFF762SBP.bam 18.8 M 0 12.9 M 0.686 SE 40 40 native 0.0 M 10.8 M 10.1 M 0.538 0.94 0.94 16.45 115 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/37662cab-af2c-4653-b2f0-cdb20e076ce4/@@download/cross_correlation_plot/ENCFF246FAV.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB067MHI xiang-dong-fu:L-U2AF2_ChIP_rep1_K562_batch11 ENCFF246FAV HiSeq 2000 2017-02-04T00:35:59.117586+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQyJQ0369PkX3JFQFq2Bbz ENCSR479QAJ https://www.encodeproject.org/experiments/ENCSR479QAJ "transcription factor,RNA binding protein" U2AF2-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF401PIJ https://www.encodeproject.org/files/ENCFF401PIJ/@@download/ENCFF401PIJ.bam ENCFF836KLS https://www.encodeproject.org/files/ENCFF836KLS/@@download/ENCFF836KLS.bam 21.2 M 0 16.9 M 0.798 SE 40 40 native 0.0 M 14.2 M 12.6 M 0.592 0.89 0.89 8.72 120 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/751a0cbc-3d5e-42dc-9804-0744cad3dfb2/@@download/cross_correlation_plot/ENCFF266IUJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB629LEK xiang-dong-fu:L-U2AF2_ChIP_rep2_K562_batch11 ENCFF266IUJ HiSeq 2500 2017-02-04T00:42:04.375532+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQyk80369BJZqpFPF415qY ENCSR479QAJ https://www.encodeproject.org/experiments/ENCSR479QAJ "transcription factor,RNA binding protein" U2AF2-human K562 immortalized cell line 2 xiang-dong-fu ENCODE3 GRCh38 ENCFF401PIJ https://www.encodeproject.org/files/ENCFF401PIJ/@@download/ENCFF401PIJ.bam ENCFF836KLS https://www.encodeproject.org/files/ENCFF836KLS/@@download/ENCFF836KLS.bam 21.2 M 0 16.9 M 0.798 SE 40 40 native 0.0 M 14.2 M 12.6 M 0.592 0.89 0.89 8.72 120 1.03 1.00 https://www.encodeproject.org/chipseq-filter-quality-metrics/751a0cbc-3d5e-42dc-9804-0744cad3dfb2/@@download/cross_correlation_plot/ENCFF266IUJ.raw.srt.filt.nodup.srt.filt.nodup.sample.15.SE.tagAlign.gz.cc.plot.pdf ENCLB629LEK xiang-dong-fu:L-U2AF2_ChIP_rep2_K562_batch11 ENCFF266IUJ HiSeq 2500 2017-02-04T00:42:04.375532+00:00 released pipeline completed https://platform.dnanexus.com/projects/BpBZvb003694v3fj3QJGK3Zb/monitor/analysis/F2BQyk80369BJZqpFPF415qY